mRNA_H-paniculata_contig30040.8156.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig30040.8156.1
Unique NamemRNA_H-paniculata_contig30040.8156.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A6H5JJ41_9PHAE (Peptidase_M16 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ41_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 1.130e-19
Identity = 40/46 (86.96%), Postives = 43/46 (93.48%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            YS YL +HGG+SNAYTDTEDTVY+FDV SDYLKGALDRFAQFFIAP
Sbjct:  204 YSTYLGSHGGTSNAYTDTEDTVYFFDVSSDYLKGALDRFAQFFIAP 249
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: D8LRX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX2_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 5.930e-19
Identity = 40/46 (86.96%), Postives = 44/46 (95.65%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            Y+ YLS+HGG+SNAYTDTEDTVY+FDV SDYLKGALDRFAQFFIAP
Sbjct:  209 YATYLSSHGGTSNAYTDTEDTVYFFDVSSDYLKGALDRFAQFFIAP 254
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A1R1Y2L3_9FUNG (Insulin-degrading enzyme n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y2L3_9FUNG)

HSP 1 Score: 80.9 bits (198), Expect = 1.180e-16
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            YS YLS HGG SNAYTDTE+T YYFDV  DYL+GALDRFAQFFI+P
Sbjct:  120 YSKYLSVHGGHSNAYTDTENTCYYFDVAQDYLEGALDRFAQFFISP 165
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A836CJH9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.020e-16
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            Y+ +L  HGGSSNAYTDTEDTVYYFD+ SDYL+ ALDRFAQFFI P
Sbjct:  154 YAAFLGAHGGSSNAYTDTEDTVYYFDINSDYLQPALDRFAQFFITP 199
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A7S2L3H0_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L3H0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.050e-15
Identity = 36/46 (78.26%), Postives = 41/46 (89.13%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            Y+ YLS +GGSSNA+TDTEDT YYFDV +DYL+GALDRFAQFFI P
Sbjct:  106 YNSYLSKNGGSSNAFTDTEDTNYYFDVNADYLEGALDRFAQFFIEP 151
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A1R0H6W9_9FUNG (Insulin-degrading enzyme n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0H6W9_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 3.660e-15
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            YS YLS HGG SNAYTDTE+T YYF++  +YL+GALDRFAQFFI+P
Sbjct:  120 YSKYLSIHGGHSNAYTDTENTCYYFEISQNYLEGALDRFAQFFISP 165
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A1D8PQ06_CANAL (Metalloendopeptidase n=4 Tax=Candida TaxID=1535326 RepID=A0A1D8PQ06_CANAL)

HSP 1 Score: 74.7 bits (182), Expect = 1.740e-14
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            YS+YLS H GSSNAYT  E T YYF VG+DYL+GALDRF+QFFIAP
Sbjct:  113 YSNYLSKHSGSSNAYTAAEHTNYYFQVGADYLEGALDRFSQFFIAP 158
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A8H6C119_CANAX (Insulinase (Peptidase M16) family protein n=1 Tax=Candida albicans TaxID=5476 RepID=A0A8H6C119_CANAX)

HSP 1 Score: 74.7 bits (182), Expect = 1.750e-14
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            YS+YLS H GSSNAYT  E T YYF VG+DYL+GALDRF+QFFIAP
Sbjct:  113 YSNYLSKHSGSSNAYTAAEHTNYYFQVGADYLEGALDRFSQFFIAP 158
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BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: A0A015J6G7_RHIIW (Ste23p n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A015J6G7_RHIIW)

HSP 1 Score: 73.9 bits (180), Expect = 3.250e-14
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            YSDYLS H G SNAYT ++ T YYF+VG +YL+GALDRFAQFFIAP
Sbjct:  160 YSDYLSKHSGHSNAYTASDSTNYYFEVGPEYLEGALDRFAQFFIAP 205
[Close]
BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Match: C5MI58_CANTT (Uncharacterized protein n=3 Tax=Candida tropicalis (strain ATCC MYA-3404 / T1) TaxID=294747 RepID=C5MI58_CANTT)

HSP 1 Score: 73.9 bits (180), Expect = 3.250e-14
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 1 
Query:    1 YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP 138
            YS+YLS H G SNAYT  E T YYF VGSDYL+GALDRFAQFFI+P
Sbjct:   89 YSNYLSKHSGHSNAYTAAEHTNYYFQVGSDYLEGALDRFAQFFISP 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30040.8156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ41_9PHAE1.130e-1986.96Peptidase_M16 domain-containing protein n=1 Tax=Ec... [more]
D8LRX2_ECTSI5.930e-1986.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A1R1Y2L3_9FUNG1.180e-1680.43Insulin-degrading enzyme n=2 Tax=Smittium culicis ... [more]
A0A836CJH9_9STRA3.020e-1678.26Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A7S2L3H0_9STRA1.050e-1578.26Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A1R0H6W9_9FUNG3.660e-1573.91Insulin-degrading enzyme n=1 Tax=Smittium mucronat... [more]
A0A1D8PQ06_CANAL1.740e-1476.09Metalloendopeptidase n=4 Tax=Candida TaxID=1535326... [more]
A0A8H6C119_CANAX1.750e-1476.09Insulinase (Peptidase M16) family protein n=1 Tax=... [more]
A0A015J6G7_RHIIW3.250e-1473.91Ste23p n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A... [more]
C5MI58_CANTT3.250e-1476.09Uncharacterized protein n=3 Tax=Candida tropicalis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig30040contigH-paniculata_contig30040:2014..2151 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.0
Seed ortholog evalue2.4e-15
Seed eggNOG ortholog2880.D8LRX2
KEGG koko:K01408
KEGG Pathwayko05010,map05010
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.Belongs to the peptidase M16 family
EggNOG OGsCOG1025@1,KOG0959@2759
EC3.4.24.56
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons1
Model size138
Cds size138
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929923.173275-CDS-H-paniculata_contig30040:2013..21511622929923.173275-CDS-H-paniculata_contig30040:2013..2151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30040 2014..2151 +
1691481071.25525-CDS-H-paniculata_contig30040:2013..21511691481071.25525-CDS-H-paniculata_contig30040:2013..2151Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig30040 2014..2151 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig30040.8156.1prot_H-paniculata_contig30040.8156.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig30040 2014..2151 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig30040.8156.1

>prot_H-paniculata_contig30040.8156.1 ID=prot_H-paniculata_contig30040.8156.1|Name=mRNA_H-paniculata_contig30040.8156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=46bp
YSDYLSTHGGSSNAYTDTEDTVYYFDVGSDYLKGALDRFAQFFIAP
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mRNA from alignment at H-paniculata_contig30040:2014..2151+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig30040.8156.1 ID=mRNA_H-paniculata_contig30040.8156.1|Name=mRNA_H-paniculata_contig30040.8156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=138bp|location=Sequence derived from alignment at H-paniculata_contig30040:2014..2151+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACTCTGACTACCTGAGCACTCACGGGGGTTCAAGCAACGCCTACACCGA
CACGGAAGACACTGTGTACTACTTCGACGTGGGTTCGGACTACCTCAAGG
GCGCTCTAGACCGGTTTGCTCAGTTTTTTATTGCCCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig30040:2014..2151+

>mRNA_H-paniculata_contig30040.8156.1 ID=mRNA_H-paniculata_contig30040.8156.1|Name=mRNA_H-paniculata_contig30040.8156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=276bp|location=Sequence derived from alignment at H-paniculata_contig30040:2014..2151+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACTCTGACTACCTGAGCACTCACGGGGGTTCAAGCAACGCCTACACCGA
CACGGAAGACACTGTGTACTACTTCGACGTGGGTTCGGACTACCTCAAGG
GCGCTCTAGACCGGTTTGCTCAGTTTTTTATTGCCCCCTACTCTGACTAC
CTGAGCACTCACGGGGGTTCAAGCAACGCCTACACCGACACGGAAGACAC
TGTGTACTACTTCGACGTGGGTTCGGACTACCTCAAGGGCGCTCTAGACC
GGTTTGCTCAGTTTTTTATTGCCCCC
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