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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2723 |
| Cds size | 1638 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2997.8132.1 >prot_H-paniculata_contig2997.8132.1 ID=prot_H-paniculata_contig2997.8132.1|Name=mRNA_H-paniculata_contig2997.8132.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=546bp
MLYSNKSRHQRIDGKEHDRDDTTQRREEQPRVERLAEERPRAEGARVREV
GARERARKEEAKLRGKEIGRVRALRCRQERELQEQKRERERAAEKGRVTT
TALWDSGKQLGHDCNDDNTNDESRRKKQRRISLVWGMSQDAHGARSQSYP
LPRHNARSCLTSSKSTGPRNTSSSSSANISARHEHENREFQNQRRRNEAT
APKEMKVHCTRADLKRRREEILRDVVCLEVATERNVWLGSTVESTTTTAT
TMEGFPPTTPRRRIIARYVESGGSGGGGGAPLCRKNERDKTNKRIHKSER
KSRHNRQEDISPHRGTTAHHHHQGFAGPGSNAGEISRWRPSPSPGSRSAT
NKRETTTLPQQRSTAIQSGRPSLSLPPQTLQPAIWGQDRHPTERRERRPR
PAPGLGWPPGEVLGAGGTLGVMATFGGPRHLRAFADPSRRDVMGAPRGAH
VGNVTRPALWGGTGALLHRRAAAAAVATTAVGPVASMTSARAMGLGMGTL
SIPVALAHSGTSGSSMGGSGTLAVGANRGDGRWVGSCGVGTLAVL* back to topmRNA from alignment at H-paniculata_contig2997:1840..8047- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2997.8132.1 ID=mRNA_H-paniculata_contig2997.8132.1|Name=mRNA_H-paniculata_contig2997.8132.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6208bp|location=Sequence derived from alignment at H-paniculata_contig2997:1840..8047- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCGTTCCGCGGTCACCGTTAGTGTGAAGGACGGACGAGGTGAGTCTCTT
ACTCATTGTAAGCACAAGCAGAAATCTTGGTATAATATCGATGCCTGCCT
CTTTTGCCTCTGCTGCTACTGCTACTGCTGCTGCTGCCGCTGGTATTGAT
ATTTTGAGGACAAAACCGCTGCTTAACGTGGTAACGTGCTGTCACCACTG
TCTATCACAACCGTCTCTTACAAACTACAGAGAACACTTATGTCATGTGT
TGGAAAAACAGGCACGTGTGCCTCGTAGCTGTCAGTGCGGACACGTAACA
CCGTGGAACAGTTCGCTGCTTATCCTTGAGTCACTTGACTATTCTGTTTC
TCAGGCACTCTTCCTCTTCCTTCTACCATGAATTGGACTTTCCCCGCAAT
TGAACAAAGTATTTTTTGTGTTCCGAAACGAATACAACACTCACCAGCAA
AGAGAGTGTTGGGGGATACTTGCAACCCATACTCTGTCCAGCAAATCGTA
TATTCAGATGTTGCGCCCAGCACTGTTGATCACACCCTGTGTTGGTTTCA
CGTGGTGGTCCAAGAGTGCGGACCTCCAACTAATACTTCCTTCGTCTTCT
AGTTAGCGGTGGTTTCACTATGTGTTTCGTGCACTCGGTACGTTTTGCGG
CGCGAGTCATCCATGCGACACAAAGAGCGCACTGTTTTTAGGAATGTGAT
GGGCTGCGTCTTCGTGCAGATGAAGTACTACTGTAGTGTAGTGTAGTGTA
CTGTGGAAAATAGCATGTGCACGTCCTGGTATTCCATCTTTTATGAGGTT
GTACCAACATATTCATGGAACATCAATGTTTTTGCCTGCAATGACACCAC
AGGTCGACTTCCCAGCGCAAGCAAATTGAACTCATTTTTGTGCTCCTGAG
GCCGCATCTTAGACTGACCCTTCATTAAGACAAGATTCCTGTGGAAAAAT
TGAGTTTGAGGCTCATTTCGATCGACGATTTCGAAAGTACCATCTCACAG
AATACGATGTTCGTGGTACAGGTTTTTTGGCTGGATGTTTGTGGATCATT
ATTGCATATGATCCGGTAACCGTAAAAAACACCGCATACAGTTTGGTTGT
GCTAGCCACCGACCGCAGCGAACATACGTGCGAATGGCATCGAATTTCGA
TGCTTGGTAGAGTATCAATTACCAGTTTTGTCAGGTGGGGTCATTGCAAT
ATGTGTGGGGTGGAGCTGAATGCACAGACAGTCAGTGCTCTGCGTGAACC
ATCCTTGAAAAAAATTGAACTTTAATTCCAACCCGGCATCCCTATTTCCA
GATTCATGTCCGAAGCAGACAGTACACAATTTTGCCAACGTCAATTCGAC
ACACAAATGGACGACGGGAGGGGAGCCTTCTGTATAATAATGTACAGATA
CTGGTTTACGGCAAGGTGCTGCCGTTTCGTGTCTGCTTCATACCTTGTTG
ATTAATTTTTACTGACAAGGGCATTCTATAACTACAGATTGAATTCAGCT
GAATAACCTCAATATGGGTATTTTGGAGTTTTTGTATTAGGTTTAGAGTT
ATAGTTCAACTGATCGGGACGGAGTTAACTTGCAAATGAGAATTTCAGTT
AGTGAAATGGTTTCATCCCCTCCCCCTCCACCTTCATCCACACCCTCTCC
TTCTCTGCCCTGCCGCCGCTGCCGTACCATGCTTCTTGACCTTATTTTTG
TTCGCAAGGTGTCCTCGCCCCAGGGGTGAACGCAAGTGTATCTATCGTGT
CCCCAACGACCTGGTGTTTGTTGCCCTTTTCAACTTCTTCGATTGGTGCG
TGATACTGTGGCAAGGCAGGAGGGCGGCCCGACCCTGCCTACCACAAGCA
CACTTGGAGAATATGTGCAGATAACGCTGCTAAACGTTTCTAGCGCCAAA
GGAGAGTAGAGAAAAAAGAGAGGAAACCTACTTACCTGTCAGCCAACTCG
GGATTCTCCTCTACAGTTTCACCATTGCCCGGGCATCACGGGTCCCACAA
ACTACGAAAGCAAACCAAACAGTCAACATTAAAAAACAAAAAAGTACGCT
TTGCATTTTTGCATTTTTAGCAAATGTTGTACTCCAACAAAAGCCGGCAC
CAGCGCATAGACGGAAAAGAACATGACCGCGACGACACGACACAGCGCCG
AGAGGAGCAGCCACGCGTCGAACGTCTCGCTGAGGAACGGCCGAGGGCGG
AGGGAGCGCGAGTCCGCGAGGTGGGGGCGAGGGAGAGAGCGCGGAAGGAA
GAGGCCAAGCTAAGGGGCAAGGAGATCGGCAGGGTTAGGGCACTGCGGTG
CCGGCAAGAGCGAGAGCTGCAGGAGCAGAAACGCGAGCGGGAGAGGGCCG
CGGAGAAGGGGCGTGTGACGACGACAGCGTTGTGGGACAGGTAAAATGAC
GAATAAAAGCGCGGTGTTTGTAGTGTACCAGTGCGGTTTTGTAGCTCGTC
CTTTGGTTTGAGTTGGGTATGCTGTTTTTTTTGTGTGCGCCCAGCTGCCA
GTTACTGCTGATTGTCACGTGTTCTTATCGTGGACCAGCTGGCGGATGGT
TATGTGAGACTTTTCAGTTGGCTACCCGCTTCGGGGGTCGACATGTGAGA
AGTTTTGATTTTGCCGCCCGGTTCGCGGATGTTCATGTGAACAGAAAACT
TGGGTTTTCCACGGTAACGGTTTTTGGAAAATAAGTGAATGGCATTGTAG
ATGATTTCCTCGTTATCGTGTTGGTAGACGGTATTCGGCATATGGGTAAC
ACGGTACTATACGGTACGGCAGTTTTATCTCTCGACATTTACGCGGCAAA
CGATTATCGATTTTCTTCCTCCATGGTACGGTATGGCACGGTGATTTGTT
TACTCAGTATCGTGCCGTGTGATATCTGGTATTTGGTATTTCGGTGCCGA
AGCGCATGATAAAGACATAAAATGCTACCACGGTATGATACGGGGAGTTG
CTCAAGGTAGAATGCCACACCACAGGACGCAGCTCTTGAGGATAATACGA
TCAATGGCCGTCTTTGCCGGCGCGTTCTGTTGGGGTACACGGTGCAAACC
GAAAGTGCATGATGACGCGTTATCATCGTGAGGAAAAGAAGCCCACCAAA
TAGTGGAAAAAATATTGAAAGACCCTACCCGGAGCGAAAACTGCATTACA
CTGGACAACACGCTGAACTCATGATGCTCATGCTGATCCGTGACCACACG
AGCTGATGAATTATGACACATAATCCTATTGTACACGAAAGCACCAACAC
AAATTTAATTCAGACCCATAGTCACTTATTTGGCAAATGCAGTCATCTCG
AAGTCGCGGTCATGGCGTTTTTCTTCATGATACACTTAACGTATGGTGTA
GAGGGCGGATCGTAATTTTTATTTTACACAAACGCCGCAGGAGTAAACGG
GAATCAGGTTCCGCTGTACCGTGTACGGTAACGGTGAACGGGAAATTGAA
TTTTTTCACGGCAATCGTACCAAGTACCGTGTATTACTGCGGTATTTCTA
CCTTGTTTTCACCAAGAATGCCCCTTCAAAAAGAATTCCGAGTTCGCCGT
CGGTCATGTGAGAATTTACCGGTCATGTGACAAAACCTGAAAATAAACTA
TTTTCCCTATCTGTAATGTCTGGACATTGTTTTTCTCCCCACCGATAACC
GGCAATGGTATCCCAAGACAAGCCTGACTCTGCATACGTGTATTGCTGCT
AGACGTGTCTCTAATGAAAGCTTCCGCCATTCGTGAAACCTAGATACGGT
AGCGTAATGTTCATTGTTTTATTGTTCCTATGTCAGTAGAGTTGCTTGGA
TTTCGACTCTAATACATGGAATGGATATACTCGAGGATATCACAGCTCAT
CGTCGACACCGCACGGCTTGGTGGGAGATCAAAATCGTCCTGTAGAGTTC
GCCAAAGACACGAGCAACTCCCGGGTCAGTGTATCCTGTAATACCGACTG
AAGCAACAATCGCGCATGTCGACTTGTTTTCTCAACAACAAAATCAGACA
ATTTACTTCTCCATATGGTGTTGAGTTTTTGTATTGTATTGTATTGTGTT
GTAGTTTAACTCCCGGTTTTAGAGACAGTAGATGGTAGGTAAACGCTTCG
CATGTGGTACATGGATCGCTCGTATGCGGTTTCGAGGTCCTGCTGAGGGA
TTTGTTTTGGCCGTAGTTCTAACACAGCTCCTCCTTGACCGTTTGATTTT
TTTCAGTGGCAAACAGTTGGGTCATGACTGCAACGATGACAACACCAATG
ACGAATCGAGAAGGAAGAAACAGCGGCGAATCTCGCTGGTTTGGGGAATG
AGTCAGGATGCTCACGGTGCGAGGTCACAAAGTTATCCACTGCCGCGCCA
CAACGCAAGGTCATGCCTTACGTCGTCGAAATCAACAGGACCTCGCAACA
CCTCCTCGTCGTCCTCAGCGAACATCAGTGCCCGCCACGAACACGAGAAC
CGAGAGTTTCAAAACCAGCGGCGGCGAAACGAAGCGACAGCTCCAAAAGA
GATGAAAGTACATTGCACGCGAGCGGATCTAAAGCGCAGGCGCGAAGAAA
TCCTGAGGGACGTCGTGTGCCTCGAGGTAGCGACGGAGCGTAATGTTTGG
TTGGGGTCGACGGTGGAGTCGACAACAACAACGGCGACAACCATGGAGGG
ATTTCCGCCAACAACACCACGGCGGAGGATCATCGCTAGATATGTCGAAT
CTGGCGGAAGCGGCGGCGGCGGCGGCGCGCCTCTCTGTCGTAAAAACGAG
CGGGACAAGACCAACAAGAGGATCCACAAAAGCGAAAGGAAATCGCGGCA
TAATAGGCAGGAAGACATATCTCCCCACCGTGGGACCACAGCTCATCACC
ACCACCAGGGTTTCGCCGGCCCTGGCAGTAACGCTGGCGAAATATCTCGC
TGGCGACCGTCCCCTTCGCCCGGTAGCAGGTCAGCGACGAACAAACGAGA
GACGACGACTTTACCCCAACAACGCTCGACCGCGATCCAGTCGGGGCGGC
CATCGCTATCTTTGCCGCCTCAGACGCTACAGCCGGCGATTTGGGGACAA
GACCGCCATCCGACCGAGCGGCGGGAGCGACGGCCTCGACCGGCGCCGGG
GCTGGGATGGCCGCCGGGAGAAGTGCTTGGGGCAGGCGGCACACTCGGCG
TGATGGCAACTTTTGGTGGCCCTCGGCATCTGCGGGCTTTTGCCGACCCC
TCTCGCCGCGACGTGATGGGTGCTCCGCGCGGTGCGCATGTGGGAAACGT
AACTCGGCCGGCGTTGTGGGGAGGGACGGGAGCGCTGCTACATCGTCGCG
CGGCGGCGGCAGCGGTGGCCACGACGGCGGTGGGTCCTGTTGCTTCGATG
ACTTCCGCGCGGGCGATGGGGCTGGGGATGGGTACGCTGTCGATACCCGT
GGCGCTAGCGCATTCTGGCACTAGCGGCAGTAGCATGGGAGGATCCGGAA
CCCTCGCGGTGGGGGCCAATAGGGGTGACGGGCGCTGGGTCGGATCCTGT
GGCGTGGGCACTCTTGCTGTGTTGTAAGGGGGGCTATGGCTCGCGCCTGT
GCTACTTGGCGGACGGCGTCAGACGTTTCAAGAATTTCACGCAAACGTTG
GACCGTTCTCTCAAGTTGCATTTTGGGAATTGATTCGGTGATCTGACTTT
CAGAAGACCTTTTGTAAAAGCAAACGGCAAGAGCTTTTTTTTTTCATTTT
CAAATCTTTACATTTTTCAGCTTTTGTTTTCAAGCCGTATTATTCGCTCG
CTCCGACAAAGGGGGGCGGATTTTTGTATAGATTTTCGTGTGGTTATCGG
TGGTCAAAAGTGAAGTTTTGGTTTTTTGTGGGTGGTGCTTTTATGCAGAA
CGTTTGTGTATGGCAGTTGAAGTGGTGGGTTTGTGCTCCCTGTGTGTGTT
GTGTTTCTTTGGAGTTGTTCGACTTGTGGATGACGCGTGTGCTGTTTGGT
GCAAGGTGACGTTTACTGTACATATAGAGGTATGTGCGTTGTTAGTTTGT
GAAGGGCAAGCGATTCATGAAATCGCTTTTCAATTTTCGGTCGCTGTGTA
CCCTGTTTTAAAAAGGGCAAGGTGCGGCAATTTCATGAAAACCTCGATTT
ACAACGTAAACCAGGCTTTTGATTTTACATTGACCGCACCGTACTGGTAT
GTTCTTGCCTGGTGAACTGTCCATGAGGGGAGCGCTTCTGCACGTCGGCG
AAGGAGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2997:1840..8047- >mRNA_H-paniculata_contig2997.8132.1 ID=mRNA_H-paniculata_contig2997.8132.1|Name=mRNA_H-paniculata_contig2997.8132.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3276bp|location=Sequence derived from alignment at H-paniculata_contig2997:1840..8047- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGTACTCCAACAAAAGCCGGCACCAGCGCATAGACGGAAAAGAACA
TGACCGCGACGACACGACACAGCGCCGAGAGGAGCAGCCACGCGTCGAAC
GTCTCGCTGAGGAACGGCCGAGGGCGGAGGGAGCGCGAGTCCGCGAGGTG
GGGGCGAGGGAGAGAGCGCGGAAGGAAGAGGCCAAGCTAAGGGGCAAGGA
GATCGGCAGGGTTAGGGCACTGCGGTGCCGGCAAGAGCGAGAGCTGCAGG
AGCAGAAACGCGAGCGGGAGAGGGCCGCGGAGAAGGGGCGTGTGACGACG
ACAGCGTTGTGGGACAGATGTTGTACTCCAACAAAAGCCGGCACCAGCGC
ATAGACGGAAAAGAACATGACCGCGACGACACGACACAGCGCCGAGAGGA
GCAGCCACGCGTCGAACGTCTCGCTGAGGAACGGCCGAGGGCGGAGGGAG
CGCGAGTCCGCGAGGTGGGGGCGAGGGAGAGAGCGCGGAAGGAAGAGGCC
AAGCTAAGGGGCAAGGAGATCGGCAGGGTTAGGGCACTGCGGTGCCGGCA
AGAGCGAGAGCTGCAGGAGCAGAAACGCGAGCGGGAGAGGGCCGCGGAGA
AGGGGCGTGTGACGACGACAGCGTTGTGGGACAGTGGCAAACAGTTGGGT
CATGACTGCAACGATGACAACACCAATGACGAATCGAGAAGGAAGAAACA
GCGGCGAATCTCGCTGGTTTGGGGAATGAGTCAGGATGCTCACGGTGCGA
GGTCACAAAGTTATCCACTGCCGCGCCACAACGCAAGGTCATGCCTTACG
TCGTCGAAATCAACAGGACCTCGCAACACCTCCTCGTCGTCCTCAGCGAA
CATCAGTGCCCGCCACGAACACGAGAACCGAGAGTTTCAAAACCAGCGGC
GGCGAAACGAAGCGACAGCTCCAAAAGAGATGAAAGTACATTGCACGCGA
GCGGATCTAAAGCGCAGGCGCGAAGAAATCCTGAGGGACGTCGTGTGCCT
CGAGGTAGCGACGGAGCGTAATGTTTGGTTGGGGTCGACGGTGGAGTCGA
CAACAACAACGGCGACAACCATGGAGGGATTTCCGCCAACAACACCACGG
CGGAGGATCATCGCTAGATATGTCGAATCTGGCGGAAGCGGCGGCGGCGG
CGGCGCGCCTCTCTGTCGTAAAAACGAGCGGGACAAGACCAACAAGAGGA
TCCACAAAAGCGAAAGGAAATCGCGGCATAATAGGCAGGAAGACATATCT
CCCCACCGTGGGACCACAGCTCATCACCACCACCAGGGTTTCGCCGGCCC
TGGCAGTAACGCTGGCGAAATATCTCGCTGGCGACCGTCCCCTTCGCCCG
GTAGCAGGTCAGCGACGAACAAACGAGAGACGACGACTTTACCCCAACAA
CGCTCGACCGCGATCCAGTCGGGGCGGCCATCGCTATCTTTGCCGCCTCA
GACGCTACAGCCGGCGATTTGGGGACAAGACCGCCATCCGACCGAGCGGC
GGGAGCGACGGCCTCGACCGGCGCCGGGGCTGGGATGGCCGCCGGGAGAA
GTGCTTGGGGCAGGCGGCACACTCGGCGTGATGGCAACTTTTGGTGGCCC
TCGGCATCTGCGGGCTTTTGCCGACCCCTCTCGCCGCGACGTGATGGGTG
CTCCGCGCGGTGCGCATGTGGGAAACGTAACTCGGCCGGCGTTGTGGGGA
GGGACGGGAGCGCTGCTACATCGTCGCGCGGCGGCGGCAGCGGTGGCCAC
GACGGCGGTGGGTCCTGTTGCTTCGATGACTTCCGCGCGGGCGATGGGGC
TGGGGATGGGTACGCTGTCGATACCCGTGGCGCTAGCGCATTCTGGCACT
AGCGGCAGTAGCATGGGAGGATCCGGAACCCTCGCGGTGGGGGCCAATAG
GGGTGACGGGCGCTGGGTCGGATCCTGTGGCGTGGGCACTCTTGCTGTGT
TGTAATGGCAAACAGTTGGGTCATGACTGCAACGATGACAACACCAATGA
CGAATCGAGAAGGAAGAAACAGCGGCGAATCTCGCTGGTTTGGGGAATGA
GTCAGGATGCTCACGGTGCGAGGTCACAAAGTTATCCACTGCCGCGCCAC
AACGCAAGGTCATGCCTTACGTCGTCGAAATCAACAGGACCTCGCAACAC
CTCCTCGTCGTCCTCAGCGAACATCAGTGCCCGCCACGAACACGAGAACC
GAGAGTTTCAAAACCAGCGGCGGCGAAACGAAGCGACAGCTCCAAAAGAG
ATGAAAGTACATTGCACGCGAGCGGATCTAAAGCGCAGGCGCGAAGAAAT
CCTGAGGGACGTCGTGTGCCTCGAGGTAGCGACGGAGCGTAATGTTTGGT
TGGGGTCGACGGTGGAGTCGACAACAACAACGGCGACAACCATGGAGGGA
TTTCCGCCAACAACACCACGGCGGAGGATCATCGCTAGATATGTCGAATC
TGGCGGAAGCGGCGGCGGCGGCGGCGCGCCTCTCTGTCGTAAAAACGAGC
GGGACAAGACCAACAAGAGGATCCACAAAAGCGAAAGGAAATCGCGGCAT
AATAGGCAGGAAGACATATCTCCCCACCGTGGGACCACAGCTCATCACCA
CCACCAGGGTTTCGCCGGCCCTGGCAGTAACGCTGGCGAAATATCTCGCT
GGCGACCGTCCCCTTCGCCCGGTAGCAGGTCAGCGACGAACAAACGAGAG
ACGACGACTTTACCCCAACAACGCTCGACCGCGATCCAGTCGGGGCGGCC
ATCGCTATCTTTGCCGCCTCAGACGCTACAGCCGGCGATTTGGGGACAAG
ACCGCCATCCGACCGAGCGGCGGGAGCGACGGCCTCGACCGGCGCCGGGG
CTGGGATGGCCGCCGGGAGAAGTGCTTGGGGCAGGCGGCACACTCGGCGT
GATGGCAACTTTTGGTGGCCCTCGGCATCTGCGGGCTTTTGCCGACCCCT
CTCGCCGCGACGTGATGGGTGCTCCGCGCGGTGCGCATGTGGGAAACGTA
ACTCGGCCGGCGTTGTGGGGAGGGACGGGAGCGCTGCTACATCGTCGCGC
GGCGGCGGCAGCGGTGGCCACGACGGCGGTGGGTCCTGTTGCTTCGATGA
CTTCCGCGCGGGCGATGGGGCTGGGGATGGGTACGCTGTCGATACCCGTG
GCGCTAGCGCATTCTGGCACTAGCGGCAGTAGCATGGGAGGATCCGGAAC
CCTCGCGGTGGGGGCCAATAGGGGTGACGGGCGCTGGGTCGGATCCTGTG
GCGTGGGCACTCTTGCTGTGTTGTAA back to top
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