mRNA_H-paniculata_contig29696.8070.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 142 bits (358), Expect = 1.620e-38 Identity = 70/142 (49.30%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 4 LEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAK 429
L G+VDADWA D DR+S Y L GG ISW S+KQ STEAEY+ A A KE +LR L IG C+ +T L DN+SA++++ H RTKHI +R+H ++E V G + L+YV TGDQ AD+L KGL +AK
Sbjct: 177 LTGYVDADWAGDVNDRRSISGYTFLLAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGLVKAK 318
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 147 bits (372), Expect = 2.960e-38 Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 1
Query: 4 LEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAK 429
L G+VDADWA D DR+S Y L GG +SW S+KQ STEAEY+AA A KE +LR LG IG C+ +T L DN+SA++++ H RTKHI +R+H ++E V G + L+YV TGDQ AD+LTKGL +AK
Sbjct: 983 LTGYVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAK 1124
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: A0A4Z0A7X3_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A7X3_9AGAM) HSP 1 Score: 138 bits (347), Expect = 6.510e-38 Identity = 69/142 (48.59%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 4 LEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAK 429
L G+VDADWA D DR S Y L GG ISW S+KQ + STEAEY+AA A KE +L L IG C+ +T L DN+SA++++ H +TKHI +R+H ++E V G + L+YV GDQ AD+LTKGL +AK
Sbjct: 79 LTGYVDADWAGDVNDRHSISGYTFLLAGGAISWSSKKQNMTALSSTEAEYIAAAHAAKEATWLCTFLSEIGRPCKAATLLLMDNQSAMAIAWNPVFHVQTKHIDVRYHFLREKVEAGAINLQYVPMGDQVADVLTKGLVKAK 220
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM) HSP 1 Score: 132 bits (333), Expect = 1.720e-36 Identity = 66/152 (43.42%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 1 GLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIG-FGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAKFQILRNLL 453
GL+G+ DADWA D + R+ST Y +NGG ISW S+KQ+ V STEAEY+A EA +E V+L+ L +G + ++EDN+ +I+L+ H RTKHI +R+H ++E V +G + L+YV T D AD++TK + +F +LR+ L
Sbjct: 24 GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAIPATQFHVLRSKL 175
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: A0A1Y1L8J7_PHOPY (Uncharacterized protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1L8J7_PHOPY) HSP 1 Score: 130 bits (327), Expect = 1.600e-35 Identity = 68/150 (45.33%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 4 LEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAKFQILRNLL 453
L + D+D+A D + RKST YV+ GG ISWCSRKQ +V+ STEAEY+AA + KE ++L+ ++ + + S TL DN+SAI L + R+KHI +R+H + E VREG+L +KY T +Q ADI TK L + KF + + LL
Sbjct: 30 LTAYCDSDFAGDVETRKSTTGYVIYFCGGPISWCSRKQPIVSLSSTEAEYIAAADCVKELLFLKSLIEEL-INTKVSKTLNVDNQSAIQLMKSGQFNRRSKHIDVRFHFLCEKVREGVLEVKYCPTNNQIADIFTKALGKQKFNVFKELL 178
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: UPI000D3F8D86 (Ty1/Copia family ribonuclease HI n=1 Tax=Acinetobacter nosocomialis TaxID=106654 RepID=UPI000D3F8D86) HSP 1 Score: 131 bits (329), Expect = 1.610e-35 Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 1 GLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIG-FGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAKFQILRNLL 453
GL+G+ DADWA D + R+ST Y +NGG ISW S+KQ+ V STEAEY+A EA +E ++L+ L IG + + ++EDN+ +I+L+ H RTKHI +R+H ++E V +G + L+Y T D AD++TK ++ +F LR+ L
Sbjct: 28 GLQGYSDADWAGDIETRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALTEATQEAIWLKAFLCEIGEMETKSAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCSTKDMLADLMTKPITAVQFDFLRSKL 179
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: UPI00193C8901 (secreted RxLR effector protein 161-like n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193C8901) HSP 1 Score: 130 bits (327), Expect = 4.950e-35 Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 1
Query: 4 LEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAKFQILRNLL 453
+EG+VDAD+AED + R+ST YV L G ++W +++Q++VT +TEAEYVAA A KE ++LR++L + C +T +F DN+S + L S H RTKHI +R H I+E V G + K V T Q AD+ TK L R +F+ L L+
Sbjct: 59 IEGYVDADFAEDLETRRSTTGYVFLLGNGAVTWTAQRQKMVTISTTEAEYVAAAAAAKEAIWLRRLLSGLERNCNRATKVFIDNQSTLRLVQNSEFHKRTKHIDVRCHFIREKVLSGKIDTKCVNTTKQKADLFTKALPRDRFKALCQLI 208
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: A0A177WSV4_BATDL (Uncharacterized protein n=1 Tax=Batrachochytrium dendrobatidis (strain JEL423) TaxID=403673 RepID=A0A177WSV4_BATDL) HSP 1 Score: 128 bits (322), Expect = 1.640e-34 Identity = 69/151 (45.70%), Postives = 96/151 (63.58%), Query Frame = 1
Query: 4 LEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAISLSMG-SGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAKFQILRNLL 453
L G+ DADWA D K RKST Y+ + +SW S KQ V + EAEY AA A +E ++LR +LG +GF G TTL+ D++SAIS +G S H TKHIG++ + +++ + +G++ +Y+ T DQ ADILTKGL R F+ NLL
Sbjct: 36 LSGYSDADWAGDVKTRKSTSGYLCYVGNALVSWRSSKQTCVAVSTMEAEYTAAESASRELLFLRDLLGELGFEQDGPTTLYCDSQSAISNMIGPSVVHEATKHIGIKINALRDRISQGLIKPEYIGTKDQVADILTKGLPRPAFEQFVNLL 186
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: A0A6A4ZBJ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZBJ3_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.670e-34 Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 1 GLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIG-FGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAKFQILRNLL 453
GL+G+ DADWA D + R+ST Y +NGG ISW S+KQ+ V STEAEY+A EA +E ++L+ L IG + + ++EDN+ +I+L+ H RTKHI +R+H ++E V +G + L+Y T D AD++TK ++ +F LR+ L
Sbjct: 124 GLQGYSDADWAGDIETRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALTEATQEAIWLKAFLCEIGEMETKSAVKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCSTKDMLADLMTKPITAVQFDFLRSKL 275
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Match: A0A6D2JBX5_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2JBX5_9BRAS) HSP 1 Score: 132 bits (333), Expect = 1.950e-34 Identity = 69/147 (46.94%), Postives = 94/147 (63.95%), Query Frame = 1
Query: 4 LEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEYVAAGEAGKETVYLRKILGSIGFGCRGSTTLFEDNESAISLSMGSGAHCRTKHIGLRWHGIQEWVREGILALKYVQTGDQFADILTKGLSRAKFQILR 444
L GFVD+D+A D DRKST YV L GG +SW S+KQ +VT +TEAE+VAA + ++LR ILG IG+ TTLF DN S I LS H R+KHI +R++ +++ V E ++ LK+ T DQ +DI+TK + F+ LR
Sbjct: 220 LVGFVDSDYAGDVDDRKSTSGYVFMLGGGAVSWASKKQPIVTLSTTEAEFVAAAYGACQAMWLRNILGEIGWAQEEGTTLFCDNSSTIKLSKNPVLHGRSKHIHVRYYFLRDLVNEEVILLKFCGTEDQLSDIMTKAVKLEVFERLR 366 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig29696.8070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig29696.8070.1 >prot_H-paniculata_contig29696.8070.1 ID=prot_H-paniculata_contig29696.8070.1|Name=mRNA_H-paniculata_contig29696.8070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp GLEGFVDADWAEDAKDRKSTIEYVLKLNGGTISWCSRKQQLVTWCSTEAEback to top mRNA from alignment at H-paniculata_contig29696:2524..2982- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig29696.8070.1 ID=mRNA_H-paniculata_contig29696.8070.1|Name=mRNA_H-paniculata_contig29696.8070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=459bp|location=Sequence derived from alignment at H-paniculata_contig29696:2524..2982- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig29696:2524..2982- >mRNA_H-paniculata_contig29696.8070.1 ID=mRNA_H-paniculata_contig29696.8070.1|Name=mRNA_H-paniculata_contig29696.8070.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=918bp|location=Sequence derived from alignment at H-paniculata_contig29696:2524..2982- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |