mRNA_H-paniculata_contig2966.8059.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: D7FPL8_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPL8_ECTSI) HSP 1 Score: 216 bits (550), Expect = 6.140e-63 Identity = 109/111 (98.20%), Postives = 110/111 (99.10%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDV+VTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLF KITDQMIVNCK
Sbjct: 268 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVNVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFGKITDQMIVNCK 378
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A6H5L5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5A5_9PHAE) HSP 1 Score: 214 bits (546), Expect = 2.120e-62 Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDV+VTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPAL+NSIKMIHTIARYYNTTERMTGLF KITDQMIVNCK
Sbjct: 17 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVNVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALINSIKMIHTIARYYNTTERMTGLFGKITDQMIVNCK 127
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A7S4J3R3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3R3_9STRA) HSP 1 Score: 185 bits (470), Expect = 2.630e-58 Identity = 92/111 (82.88%), Postives = 100/111 (90.09%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
K+VIGLLS LTK S D SK KI LLRRWKQID+ +TEAANEAKDNVK+LYTL+RFIEPLYSGTA TIID LPALMN+IKMIHTIARYYNTTERMT LFA+ITDQMI+NCK
Sbjct: 18 KNVIGLLSALTKGSGDQSKAKILLLLRRWKQIDIGITEAANEAKDNVKYLYTLQRFIEPLYSGTAQTIIDGLPALMNAIKMIHTIARYYNTTERMTNLFARITDQMIINCK 128
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: F0YFN5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFN5_AURAN) HSP 1 Score: 186 bits (471), Expect = 2.700e-52 Identity = 92/111 (82.88%), Postives = 101/111 (90.99%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
K VI LL ++TKNSADPSKQK+ +LLRRWKQ DV++TEAANEAKDNVK+L+TLERFIEPLY GTATTIIDTLPAL NSIKMIHTIARYY+T ERMT LFA ITDQMIVNCK
Sbjct: 148 KSVINLLQSVTKNSADPSKQKMMSLLRRWKQTDVNITEAANEAKDNVKYLFTLERFIEPLYKGTATTIIDTLPALTNSIKMIHTIARYYSTNERMTALFACITDQMIVNCK 258
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A8J2SYB8_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYB8_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.870e-50 Identity = 87/111 (78.38%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
K V+ LL +TKN+ DPSKQK+ LLRRWKQ DV++TEAANEAKDNVK+L+TLERFIEPLY GT TTI+DTLPAL NSIKMIHTIARYY+T+ERMT LFA ITDQMIVNCK
Sbjct: 263 KAVVNLLQAVTKNTGDPSKQKLVALLRRWKQTDVNITEAANEAKDNVKYLFTLERFIEPLYKGTTTTIVDTLPALTNSIKMIHTIARYYSTSERMTALFACITDQMIVNCK 373
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A482S391_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S391_9ARCH) HSP 1 Score: 178 bits (451), Expect = 1.310e-49 Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
K VI +LS LTK + D KQ +AN LRRWKQIDV++TE+ANEAKDNVK+LYTLERFI+PLY+G A TIIDTLPALMNSIKMIHTIARYYNT ERMT LFAKIT+QMI NCK
Sbjct: 189 KQVISVLSALTKAATDSGKQSVANSLRRWKQIDVNITESANEAKDNVKYLYTLERFIDPLYTGNAETIIDTLPALMNSIKMIHTIARYYNTPERMTALFAKITEQMIANCK 299
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A6A3HGX3_9STRA (DHC_N1 domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3HGX3_9STRA) HSP 1 Score: 162 bits (409), Expect = 8.610e-49 Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
KDV +LS TK +D +KQ+I LLRRWKQID+ +TEAANEAKDNV +L+TLE+FI PLY+GT ++IIDTLPALMNSIKMIH+IARYYNTTERM LF KIT+QMI CK
Sbjct: 27 KDVFAVLSQTTKRISDDTKQRIQTLLRRWKQIDIGITEAANEAKDNVMYLFTLEKFIIPLYNGTPSSIIDTLPALMNSIKMIHSIARYYNTTERMANLFTKITNQMITICK 137
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A835YLK0_9STRA (Dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK0_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.600e-48 Identity = 82/111 (73.87%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
K V+GLLS +T+++A+P + ++ LLRRWKQ DVD+TEAANEAKDNVK+L+TLERFIEPLY G TI+DTLPAL+NSIKMIHTIARYYNT+ERMTGLF KIT+QMI NCK
Sbjct: 291 KAVVGLLSAVTRSAAEPVRARVGALLRRWKQTDVDITEAANEAKDNVKYLFTLERFIEPLYGGAPATIVDTLPALLNSIKMIHTIARYYNTSERMTGLFVKITNQMIANCK 401
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A2D4CHX6_PYTIN (DHC_N1 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CHX6_PYTIN) HSP 1 Score: 167 bits (423), Expect = 2.480e-47 Identity = 80/111 (72.07%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
KDV +LS TK+ +D +KQ++ LLRRWKQID+ +TEAANEAKDNVK+L+TLE+F+ PLY GT ++IIDTLPALMNSIKMIH+IARYYNTTERM LFAKIT+QMI NCK
Sbjct: 327 KDVFHVLSRTTKSVSDDTKQRVQTLLRRWKQIDIGITEAANEAKDNVKYLFTLEKFLIPLYQGTPSSIIDTLPALMNSIKMIHSIARYYNTTERMANLFAKITNQMIANCK 437
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Match: A0A2R5GXI3_9STRA (Dynein heavy chain 5, axonemal n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXI3_9STRA) HSP 1 Score: 171 bits (434), Expect = 2.610e-47 Identity = 82/111 (73.87%), Postives = 99/111 (89.19%), Query Frame = 1
Query: 1 KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLYTLERFIEPLYSGTATTIIDTLPALMNSIKMIHTIARYYNTTERMTGLFAKITDQMIVNCK 333
K VI +LS+LTKN D ++QK+ +LLRRWKQID+++TEAANEAKDNVK+L+TLE+FIEPLYSGT +++DTLPALMNSIKMIHTIARYYNT ERMT LF+KIT+QMI CK
Sbjct: 270 KTVIAVLSSLTKNPQDSNRQKVFSLLRRWKQIDINITEAANEAKDNVKYLFTLEKFIEPLYSGTPESVVDTLPALMNSIKMIHTIARYYNTMERMTNLFSKITNQMISCCK 380 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2966.8059.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2966.8059.1 >prot_H-paniculata_contig2966.8059.1 ID=prot_H-paniculata_contig2966.8059.1|Name=mRNA_H-paniculata_contig2966.8059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=111bp KDVIGLLSTLTKNSADPSKQKIANLLRRWKQIDVDVTEAANEAKDNVKFLback to top mRNA from alignment at H-paniculata_contig2966:16995..19070+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2966.8059.1 ID=mRNA_H-paniculata_contig2966.8059.1|Name=mRNA_H-paniculata_contig2966.8059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2076bp|location=Sequence derived from alignment at H-paniculata_contig2966:16995..19070+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2966:16995..19070+ >mRNA_H-paniculata_contig2966.8059.1 ID=mRNA_H-paniculata_contig2966.8059.1|Name=mRNA_H-paniculata_contig2966.8059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at H-paniculata_contig2966:16995..19070+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |