mRNA_H-paniculata_contig2966.8057.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: D7FPM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM1_ECTSI) HSP 1 Score: 287 bits (735), Expect = 3.460e-89 Identity = 194/376 (51.60%), Postives = 223/376 (59.31%), Query Frame = 3
Query: 30 PELTTEEYVRALP-------GAVP---ASLTLSLICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDE---KSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLA-------------RLETAEVWVSFSHHDPEKSKLDMNFFELASLKGFASMPIKTVQRRDLFVENDGLDELRGEVHLWRLTRK 1079
P L EEY R P GA+P ++L LSL+ RHSLWGHRLWNAA++LA+M+D E V GK VLELGAGAGLP LIC L GA KVVISDYATSTD ALMVPI++NI+RVQP FVP GTLH VGHVWG +VE+LL PL R S + R + S D K+ S XXXXXXXXXXX G V + G V S + + R GGG G +G GFD++I+ADLLFNRSQH QLLETC R L VWVSFSHHDPEK++LDM FFELA KGF + IKTVQ RDLFVENDGLD+LRG+VHLW L R+
Sbjct: 31 PALVEEEYTRTPPKGSAEGRGALPPRPSTLKLSLVNSRHSLWGHRLWNAALLLADMVDKDEFDVRGKRVLELGAGAGLPALICALKGATKVVISDYATSTDAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLLVPL----RTGSSLSLRHENGGGSSSDGEKNASLGSGAAXXXXXXXXXXXXXXA--GAPVQDTGTEE--------EVASVHGQGEGSPRSCHRARPIGGGGG---------------------DGEGFDVVIMADLLFNRSQHAQLLETCDRCLLGRGSXXXXXXXXXXXXXXTVWVSFSHHDPEKAELDMKFFELAKEKGFVATRIKTVQMRDLFVENDGLDDLRGQVHLWCLKRR 371
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: A0A6H5JE74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE74_9PHAE) HSP 1 Score: 239 bits (611), Expect = 7.590e-72 Identity = 160/318 (50.31%), Postives = 185/318 (58.18%), Query Frame = 3
Query: 165 MIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLA-------------RLETAEVWVSFSHHDPEKSKLDMNFFELASLKGFASMPIKTVQRRDLFVENDGLDELRGEVHLWRLTRK 1079
M+D E+ V GK VLELGAGAGLP LIC L GA KVVISDYATSTD ALMVPI++NI+RVQP FVP GTLH VGHVWG +VE+L PL + +S ++ XXXXXXXXXXX GA A + ++ SG +P G TR GG G +G GFD++I+ADLLFNRSQH QLLETC R L +WVSFSHHDPEK++LDM FFELA KGF + IKTVQ RDLFVENDGLD+LRGEVHLW L R+
Sbjct: 1 MVDKDELDVRGKRVLELGAGAGLPSLICALKGATKVVISDYATSTDAALMVPIQINIDRVQPEFVPEGTLHAVGHVWGQAVEDLRAPLRTGSSLSLRHDNGVGSRSDGEKNVILGSVAADXXXXXXXXXXXXXAGAPVQATGTEEEIE-----SGYGQ-----GEGSPGGGCHRTRPIAGGGG---------------------DGEGFDVVIMADLLFNRSQHAQLLETCGRCLLGRGSXXXXXXXXXXXXXXTMWVSFSHHDPEKAELDMKFFELAKDKGFVATRIKTVQMRDLFVENDGLDDLRGEVHLWCLKRR 287
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: A0A836CF85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF85_9STRA) HSP 1 Score: 176 bits (445), Expect = 2.830e-48 Identity = 119/336 (35.42%), Postives = 152/336 (45.24%), Query Frame = 3
Query: 69 GAVPASLTLSLICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLARLETAEVWVSFSHHDPEKSKLDMNFFELASLK------GFASMPIKTVQRRDLFVENDGLDELRGEVH 1058
G P++LTL+L+ RHSLWGH LWNA+I LAEM D GE+ ++GKTVLELGAGAGLPGLI L GA V+I+DY TS D L+ I+ NI+ + P VP LH HVWG SV+ LLD L G FD+++LADLLFNRS+H +LL+TC+ +LA T VWV++ HHDP K+ LD+ FFE+A+ F + VQ DLF E+DG+DE RG V+
Sbjct: 2 GLEPSTLTLTLVSSRHSLWGHLLWNASIRLAEMFDGGEVDLKGKTVLELGAGAGLPGLIAALCGASTVLITDYGTSVDHTLVEAIRRNIDALSP-HVPKECLHAAPHVWGGSVQPLLDVLG-------------------------------------------------------------------------------------------------------------------EGHKFDVILLADLLFNRSEHRKLLQTCSTALAPGGT--VWVTWGHHDPPKAPLDLKFFEIAAAPHSEGGFDFELEHLPPVQYVDLFEEHDGMDEARGVVY 219
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: K8Z697_NANGC (Nicotinamide n-methyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z697_NANGC) HSP 1 Score: 153 bits (386), Expect = 4.300e-39 Identity = 111/317 (35.02%), Postives = 139/317 (43.85%), Query Frame = 3
Query: 15 DEVEDPELTTEEYVRALPGAVPASLTLSLICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIER-VQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLARLETAEVWVSFSHHDPEKSKLDMNFFELAS 962
+E P LTT Y R P A+P L +SL+ RHSLWGH+LWNAA VL EMID V+GK LELGAGA LP L+ LNGA++VV SDYATSTD+ L+ ++ NI+R V F+P L VG+VWG + LL PL + E GG G+S F +++ ADL+FNRS+H +LL TC L E EV V++SHHDP K LDM FF LA+
Sbjct: 48 EEDSSPMLTTHTYTRRDPTALPLELEISLLSCRHSLWGHKLWNAAKVLGEMIDSRPSLVQGKYCLELGAGAALPSLLAALNGARRVVCSDYATSTDRVLVAAMQTNIDRLVAQAFLPHDVLRAVGYVWGQPINSLLAPL---------------------------------------------------------------------------------------QEEKGG-------------------GVSK----FQVILCADLIFNRSEHKKLLWTCKTCLE--EDGEVLVTYSHHDPGKRALDMAFFALAT 252
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: A0A482T280_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T280_9ARCH) HSP 1 Score: 120 bits (301), Expect = 1.850e-26 Identity = 101/345 (29.28%), Postives = 147/345 (42.61%), Query Frame = 3
Query: 87 LTLSLICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTV---------------LELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLARLETAEVWVSFSHHDPEKSKLDMNFFELASLK-GFASMPIKTVQRRDL-FVENDGLDELRGEVHLWRL 1070
L L+L+ K HSLW ++NAA ++A++I + + + LELGAGAGLPG++ + GA++VVISDY + D +L+ PI N+E ++ LH V + WG+ + L + Q T T +D S + S +G D GI + D E+ FD + LADL+FNRS+H +LL T R + + +V+FSHHDP K+ LD+NFF LA + G + V R+ F E+DGLDE RG VH + L
Sbjct: 83 LQLALLNKHHSLWAEFIYNAARLMADIIVLPQADGSNSAIENALPPIVIESSDNCLELGAGAGLPGIMAAVCGARRVVISDYGSDLDLSLIYPIDSNVEYIKRICSSVAELHAVAYTWGYPIYPLTNTTQYYQH----TDTSLDLTS-----------------------------YAAYVQSKTSRRVGKGDHHGIMIE------------------------------------DYEK---------FDKIFLADLVFNRSEHRKLLWT-VRECLKPDKGVCYVTFSHHDPSKAALDLNFFTLAEEEFGLRVCKLGEVMRQSYPFRESDGLDEKRGVVHFYTL 348
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: F0ZWG9_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZWG9_DICPU) HSP 1 Score: 110 bits (276), Expect = 8.760e-24 Identity = 90/328 (27.44%), Postives = 132/328 (40.24%), Query Frame = 3
Query: 102 ICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLARLETAEVWVSFSHHDPEKSKLDMNFFELASLKGFASMPIKTVQRR--DLFVENDGLDELRGEVHLWRLTRK 1079
+ +RHSLW H WNA I L++ D G + + K VLELGAGAGLP I LNGAKKV+++DY D+ L+ + NIE P + + G H+WG E+L + L +NP +T + FDI+IL+DL+FN + ++L TCA L+ + ++V+FSHH P + D+ FFELAS + F K +R+ +F ++ G +E+R VH + L RK
Sbjct: 54 LSQRHSLWAHLPWNAGIALSDYFDSGAVDFKNKNVLELGAGAGLPSFIAALNGAKKVLLTDYP---DKDLIDNMLYNIENAVPNSISENRILGKPHLWGKEPEKLFEYL-----------------------------------------------------------------------------ENP-----TTEK-------------------------------FDIIILSDLIFNHATQDKMLLTCANCLS--DDGIIFVTFSHHRPNRMAKDLYFFELASQEPFNFTSEKFNERKMHAMFEDDLGPEEVRATVHFYLLKRK 263
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: Q54F12_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54F12_DICDI) HSP 1 Score: 107 bits (267), Expect = 1.410e-22 Identity = 91/328 (27.74%), Postives = 132/328 (40.24%), Query Frame = 3
Query: 102 ICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLARLETAEVWVSFSHHDPEKSKLDMNFFELASLKGFASMPIKTVQRRDLFV-END-GLDELRGEVHLWRLTRK 1079
+ +RHSLW H WNA I L++ D + + K VLELG+GAGLP I GLNGAKKVV++DY D L+ + NI P V ++G GH+WG E L L +NP ST + FDI+IL+DL+FN + H ++L +C++ L+ + ++V+FSHH P + D+ FFE+A+ + + P K +RR + END G +E+R V + L RK
Sbjct: 55 LSQRHSLWAHLPWNAGIALSDYFDE-HVDFKNKNVLELGSGAGLPSFIAGLNGAKKVVLTDYP---DTNLIENLNYNITNSLPESVTKDRIYGKGHLWGKEPESLFQYL-----------------------------------------------------------------------------ENP-----STEK-------------------------------FDIIILSDLIFNHAAHDKMLISCSKCLS--DDGVIYVTFSHHRPNRIAKDLAFFEIATEEPYNFTPEKFNERRMCAMFENDLGPEEIRSTVCFYTLKRK 263
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: A0A4Q0A035_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4Q0A035_9FUNG) HSP 1 Score: 107 bits (267), Expect = 2.000e-22 Identity = 100/348 (28.74%), Postives = 139/348 (39.94%), Query Frame = 3
Query: 66 PGAVPASLTLSLICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQP--TFVPPGTLHG--VGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGPGFDILILADLLFNRSQHVQLLETCARSLARLETA---EVWVSFSHHDPEKSKLDMNFFELASLK-GFASMPIKTVQRRDLFVENDGLDELRGEVHLWRLTRKAS 1085
PG PAS+ + L+ H LWGH LWNAA + + +D + V+GK VLELGAGA LP ++ LNGA++VVI+DY D LM I+ N++R P T P G+ G +WG LL+ L+ DE S S ++ R+ FD++IL DL+FN SQH QLL TC L + A E++V F+HH P + D+ FF A + GF S T +F ++ G +R VH +R+T S
Sbjct: 17 PGT-PASVQVRLVGS-HPLWGHMLWNAAKLFSHYLDAHKALVQGKNVLELGAGAALPSIVATLNGARRVVITDYP---DIDLMNNIRFNVDRTLPGYTTAPGGSGQARVEGFLWGADSTPLLNLLA-------------DEPS-----------------------------------------------SSXXXXXXXXXXXXXXXAAKAGNRK------------------------------FDLIILCDLIFNHSQHTQLLRTCRECLDTSDPAHPGEIYVFFTHHRPHLAHRDLAFFTKAQEEFGFESEEFMTRMMIPMFEKDQGPASVRATVHCYRMTLPTS 269
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: A0A7S1UJM9_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJM9_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.580e-22 Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 3
Query: 78 PASLTLSLICKRHSLWGHRLWNAAIVLAEMIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQ 347
P L L L+ + HSLWGH+LWNA++V+A+M+D GEI V GK+VLELG+GA LP + G+ G+ VV +DYA TDQ L+ I+ N+ER Q
Sbjct: 36 PRILNLGLVGEHHSLWGHKLWNASLVVADMVDAGEIDVTGKSVLELGSGAALPSCMAGICGSSCVVAADYAIDTDQHLVDNIRDNLERFQ 125
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Match: A0A0D2AA56_9PEZI (Protein N-terminal and lysine N-methyltransferase EFM7 n=1 Tax=Verruconis gallopava TaxID=253628 RepID=A0A0D2AA56_9PEZI) HSP 1 Score: 105 bits (262), Expect = 6.020e-22 Identity = 95/333 (28.53%), Postives = 131/333 (39.34%), Query Frame = 3
Query: 87 LTLSLICKRHSLWGHRLWNAAIVLAEMIDVGEIS-VEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMVPIKMNIERVQPTFVPPGTLHGVGHVWGHSVEELLDPLSVRQRCRHSTTTRMDEKSRDDRKHFENDSDXXXXXXXXXXXXXAKGGADGFAVSNQGDVMGNSDMSGIAVPSCNFSRQNPREGIQSTRREGGGRGGRXXXXDGDGVWDAEERGLSSNGP-GFDILILADLLFNRSQHVQLLETCARSLARLETAEVWVSFSHHDPEKSKLDMNFFELASLKGFASMPI-KTVQRRDLFVENDGLDELRGEVHLWRLTR 1076
LTL L+ + LWGH LWNA +A+ ++ V+G+ +LELGAGAGLP LIC LNGA +V+++DY D L+ +K NIE+ F PG L GH+WG SV+ LL L +N P GF LILADLLFN S+HV+LL + +L A V F+ + P + D+ FFELA GF I + + + +F E+ G ++LR V+ +RL R
Sbjct: 39 LTLRLV-GHNPLWGHFLWNAGRTIADYLEENASEYVKGRNILELGAGAGLPSLICALNGANRVIVTDYP---DPELIENLKTNIEQCS-AFTNPGILETTGHLWGDSVDSLLALLPP-----------------------------------------------------------------------------------------------------------------NNKPTGFQTLILADLLFNHSEHVKLLHSIEHTLQHSSDACALVFFTPYRPWLLEKDLAFFELAKQAGFMVEKIFEKLMEKVMFKEDPGDEKLRRTVYGYRLRR 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2966.8057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2966.8057.1 >prot_H-paniculata_contig2966.8057.1 ID=prot_H-paniculata_contig2966.8057.1|Name=mRNA_H-paniculata_contig2966.8057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=310bp MIDVGEISVEGKTVLELGAGAGLPGLICGLNGAKKVVISDYATSTDQALMback to top mRNA from alignment at H-paniculata_contig2966:1184..3960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2966.8057.1 ID=mRNA_H-paniculata_contig2966.8057.1|Name=mRNA_H-paniculata_contig2966.8057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2777bp|location=Sequence derived from alignment at H-paniculata_contig2966:1184..3960+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2966:1184..3960+ >mRNA_H-paniculata_contig2966.8057.1 ID=mRNA_H-paniculata_contig2966.8057.1|Name=mRNA_H-paniculata_contig2966.8057.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at H-paniculata_contig2966:1184..3960+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |