mRNA_H-paniculata_contig2949.8023.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: A0A6H5JNY5_9PHAE (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY5_9PHAE) HSP 1 Score: 136 bits (343), Expect = 3.050e-35 Identity = 70/85 (82.35%), Postives = 77/85 (90.59%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
M+VKVLFFASCREMAG KETSLELPGDSS+ LRE IV++LP L+PVAATVTLA+NQEY+DPEQD PLKEGDEVAFIPPISGG
Sbjct: 1 MKVKVLFFASCREMAGTKETSLELPGDSSSIAQLREHIVKKLPGLQPVAATVTLALNQEYLDPEQD-APLKEGDEVAFIPPISGG 84
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: D8LMR2_ECTSI (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMR2_ECTSI) HSP 1 Score: 137 bits (345), Expect = 3.060e-35 Identity = 72/91 (79.12%), Postives = 79/91 (86.81%), Query Frame = 1
Query: 25 VGDTEAMRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
V + A +VKVLFFASCREMAG KETSLELPGDSS+ LRE IVE+LP L+PVAATVTLA+NQEY+DPEQD T LKEGDEVAFIPPISGG
Sbjct: 17 VKSSPAQQVKVLFFASCREMAGTKETSLELPGDSSSIAQLREHIVEKLPGLQPVAATVTLALNQEYLDPEQDAT-LKEGDEVAFIPPISGG 106
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: A0A835YXW6_9STRA (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXW6_9STRA) HSP 1 Score: 102 bits (255), Expect = 6.350e-23 Identity = 53/85 (62.35%), Postives = 66/85 (77.65%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
M+VKVLFFASCRE+AG KE ++ L G ++T+ LR+ +VE LP L+PVA +TLAVN EY DP Q+ LK+GDEVA IPPISGG
Sbjct: 1 MKVKVLFFASCRELAGTKEIAVTLEGAENSTEALRKKLVELLPALEPVAWGITLAVNHEYTDPGQN-VQLKDGDEVALIPPISGG 84
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: D8U2Z7_VOLCA (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U2Z7_VOLCA) HSP 1 Score: 80.9 bits (198), Expect = 3.640e-15 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
MR+KVLFFA RE+AG+ E EL +T +L +II P L+ V + AVNQEY+ P D+ PLKEGDEVA IPP+SGG
Sbjct: 1 MRIKVLFFAKSREVAGLSEQVFELADGGNTEDLLHQIISAH-PGLENVMKSCVFAVNQEYVRP-CDKEPLKEGDEVAIIPPLSGG 83
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: A0A8J4EYW2_9CHLO (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EYW2_9CHLO) HSP 1 Score: 81.6 bits (200), Expect = 7.450e-15 Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
MR+KVLFFA RE+AG+ E EL ++T +L ++I+ R P + + T AVNQEY+ P QD LKEGDEVA IPP+SGG
Sbjct: 50 MRIKVLFFAKSREVAGLSEQVFELENGANTEDLL-QLIISRHPGIDGLMKTCVFAVNQEYVRP-QDRELLKEGDEVAIIPPLSGG 132
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: A0A6P4Z232_BRABE (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z232_BRABE) HSP 1 Score: 80.1 bits (196), Expect = 8.960e-15 Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
++V +LFFA RE+ G KE +L +PG +++ ++L I V R P L ++ + LAVNQEY+ P D L+ GDEVA IPPISGG
Sbjct: 10 VQVNLLFFAKSRELVGSKEATLAVPGQTTSAQLLAAI-VSRYPSLAVISNNLVLAVNQEYVAPGNDLLTLQPGDEVAVIPPISGG 93
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: L8H968_ACACA (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H968_ACACA) HSP 1 Score: 79.7 bits (195), Expect = 9.280e-15 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
MRVK LFFA+ R++ G++E L D + T L ++E+ P L P+ + LAVNQEYIDPE LK+GDE+A IPPISGG
Sbjct: 1 MRVKCLFFAASRDVTGVQEKELTY-ADGTKTDALIANLIEQFPGLGPIFQSAVLAVNQEYIDPESP-IELKDGDEIAVIPPISGG 83
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: A0A150H0I6_GONPE (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H0I6_GONPE) HSP 1 Score: 79.3 bits (194), Expect = 1.270e-14 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
M++KVL+FA RE+AG+ E + LP + T +L+ II P L+ V T A+NQEY+ PE D+ LK+GDEVA IPP+SGG
Sbjct: 1 MQIKVLYFAKSREVAGIAEQAFNLPDGADTADLLQHIISSH-PALESVMKTCVFALNQEYLRPE-DKEALKDGDEVAVIPPLSGG 83
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: A0A6A3EY87_9STRA (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3EY87_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.410e-14 Identity = 43/101 (42.57%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG*LRVITIMHRSEDEIR 345
M +KVL+FAS RE G++E L LP S+T + LR +++++ P+ ++TLA N EY D D+ L +GDEVA IPPISGG R + S +R
Sbjct: 3 MEIKVLYFASAREEVGLREEKLTLPRSSATLRELRRVLMDKHPQAAATIESITLARNLEYSD---DDVALADGDEVALIPPISGGVPRESPTIAISSGSLR 100
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Match: G5A3S1_PHYSP (Molybdopterin synthase sulfur carrier subunit n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A3S1_PHYSP) HSP 1 Score: 79.3 bits (194), Expect = 1.420e-14 Identity = 42/89 (47.19%), Postives = 58/89 (65.17%), Query Frame = 1
Query: 43 MRVKVLFFASCREMAGMKETSLELPGD----SSTTKVLREIIVERLPRLKPVAATVTLAVNQEYIDPEQDETPLKEGDEVAFIPPISGG 297
+ VKVL+FAS RE G++E L+LP D S+T LR ++V++ P ++TLA N EY +D++PL +GDEVA IPPISGG
Sbjct: 2 LEVKVLYFASAREEIGLREEKLQLPVDGDKNSATLASLRRVLVDKYPHAAATIESITLARNLEY---SEDDSPLDDGDEVALIPPISGG 87 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2949.8023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2949.8023.1 >prot_H-paniculata_contig2949.8023.1 ID=prot_H-paniculata_contig2949.8023.1|Name=mRNA_H-paniculata_contig2949.8023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp MRVKVLFFASCREMAGMKETSLELPGDSSTTKVLREIIVERLPRLKPVAAback to top mRNA from alignment at H-paniculata_contig2949:640..3048- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2949.8023.1 ID=mRNA_H-paniculata_contig2949.8023.1|Name=mRNA_H-paniculata_contig2949.8023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2409bp|location=Sequence derived from alignment at H-paniculata_contig2949:640..3048- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2949:640..3048- >mRNA_H-paniculata_contig2949.8023.1 ID=mRNA_H-paniculata_contig2949.8023.1|Name=mRNA_H-paniculata_contig2949.8023.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=516bp|location=Sequence derived from alignment at H-paniculata_contig2949:640..3048- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |