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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 3 |
| Model size | 1595 |
| Cds size | 1593 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2945.8015.1 >prot_H-paniculata_contig2945.8015.1 ID=prot_H-paniculata_contig2945.8015.1|Name=mRNA_H-paniculata_contig2945.8015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=531bp
AAAAAAAAHKLRQAKAHAHLLTQAAKALAYEKLQSQAFEFLRAKASAAEK
SAATGKLPPVPRSVPPRHQGQGQPPPPPPPPRSSTLAASTFHSAPLGSQA
TRTATALTADGGGGGGGGGIMLRAGRDTALTTAATASPAQSVVTAVEEEV
EGEAARKEVNDDRNRHEFVRSSSMPRPGVGNDGVWSDVLAIAPGTVRQAV
ARMQRAQAAAEAAATPQSSTGTGRKKLSSRLVRIDGRVRSGSVKQLATAT
ATASGVHVTTPASYKRSVSATLPDKTAVGDTAVVVAAPAVDALAVAGAHE
SVGRAPAATQKMEDAKASLPNAAKVAAGEERLRGVVGAARSSEVRVPVGL
SSPRAAVDVSAAPHLGLQQQEAKERDRRRVDLMMESLKKAQELSGNSSRS
SLNHNHNATETPAVATAPIAGPSSVGQHCRSPPGSGDVSGNGTFTDGETE
ATEVDSHLGSCSTRPGEEQASDDVYSGSDAEGVTANETSDDGDDAESESS
EAFGSWAAGVGSGEHGSGRGGVVGNAAVAVT back to topmRNA from alignment at H-paniculata_contig2945:1988..4350- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2945.8015.1 ID=mRNA_H-paniculata_contig2945.8015.1|Name=mRNA_H-paniculata_contig2945.8015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2363bp|location=Sequence derived from alignment at H-paniculata_contig2945:1988..4350- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGCGGCGGCTGCGGCGGCCGCTCACAAACTTAGGCAGGCAAAGGCTCA
CGCACACCTGCTGACGCAGGCGGCGAAGGCCCTCGCGTACGAGAAGTTGC
AGGCAAGTATTATTTATTGGGAAATTTACTTTCAGCGGGGAGTGCTTGGA
GATACGATAAGGTTATCATGGAACACCGCGTCTACAGCGGTCGTTAATAC
GGATATGGTAAAGGTGTCGCGTCGTTTTCTGCGGTATGTGGGACGAGTTG
GACATTACTTGTTGAAGCAATAAAGCAAAATACCCTCACCTCAACCTGAG
AAGACAAGATAGCTCTTAGTAAATGTTGAAATACGACAAGTGTTTCTTTC
ACAACCTCTTGAGCATTTTCGGGCATTGGTGATAACATCACTAGTTCGCG
CGAAAAAAACAGCTGCGTGCATCCAAAAAATCAACTTGACGGTTTGTGGT
GAACTTCTCGAGACAAAAATTCCGCACCCCGAAATCTGCGCCGCTCTTCC
CTACCCTCCTCCTCATTTTGCCGCTGCTCGAATTCCTAGTCCCAAGCATT
CGAATTTTTGCGTGCGAAAGCGTCGGCTGCTGAGAAATCCGCGGCCACGG
GCAAGCTACCGCCGGTGCCACGATCAGTCCCCCCAAGACACCAAGGGCAA
GGGCAGCCGCCGCCGCCGCCGCCCCCACCACGCTCGTCCACCCTAGCAGC
ATCCACGTTCCACTCGGCGCCGCTAGGATCCCAGGCAACAAGAACGGCGA
CAGCGTTGACAGCGGATGGCGGTGGGGGCGGCGGGGGCGGTGGGATCATG
CTACGAGCAGGCCGTGATACGGCTCTAACGACGGCAGCGACTGCGAGCCC
GGCGCAGTCGGTGGTGACCGCGGTGGAGGAGGAGGTGGAGGGAGAGGCGG
CGAGGAAAGAGGTCAACGATGACCGAAATCGACACGAGTTCGTCAGGAGC
AGCTCGATGCCGCGGCCGGGGGTGGGGAACGATGGTGTGTGGTCTGACGT
ACTGGCGATAGCGCCGGGAACGGTGCGGCAGGCGGTCGCACGAATGCAAC
GCGCTCAAGCAGCGGCCGAGGCAGCGGCGACGCCGCAATCATCAACCGGC
ACCGGCCGAAAGAAGCTCTCTTCTCGGCTCGTGAGGATCGATGGTCGTGT
ACGGAGCGGATCGGTGAAGCAACTCGCGACTGCCACCGCCACTGCGAGTG
GTGTTCATGTGACGACGCCGGCATCGTACAAGCGCTCGGTATCTGCGACG
CTTCCGGATAAAACGGCAGTAGGTGATACTGCGGTGGTGGTGGCGGCGCC
CGCTGTCGACGCCCTGGCAGTTGCGGGAGCACACGAGTCGGTAGGGAGGG
CGCCGGCGGCAACGCAGAAGATGGAGGATGCAAAGGCTTCCCTGCCCAAT
GCCGCAAAAGTAGCAGCGGGGGAAGAGAGGCTGCGGGGAGTAGTTGGTGC
TGCGCGTAGTAGTGAGGTGAGAGTCCCTGTTGGTCTGTCAAGCCCTAGAG
CTGCTGTTGATGTGAGCGCCGCCCCTCACCTGGGTCTGCAGCAACAAGAG
GCGAAAGAGAGGGACCGTCGGAGGGTGGACCTCATGATGGAAAGCCTCAA
GAAGGCACAGGAGCTGTCAGGAAACAGCAGGCGAGTTTAATGTCTCGCCC
TACTCCGAATCAACTGTTTGCATTTGTTGCAGCATGAAGGGTATACGATG
TGTAGTCGGCTACTGTCGTAAGTTTGTTGAAAAGCGATACTTTTTGGATC
AATCCACCCATTCACCAGTTGTCGTTTACAGACACACGAATTATAGACAT
ATAACCCCCTCCACACCCTCTGCCCTGATGCAGCGCCGTCATTTCGAGGA
CGCGCGGTCGACGATCAAACTAGTACAGCATGTAAAGCGTGTGTGTACCC
CCCCGACGCTGCCCCTCCTAATATTCACCATACCAACTTTTCCGACTTGA
TGTGCCTACAGTAGAAGCAGCCTCAACCATAACCACAACGCAACAGAAAC
GCCTGCAGTGGCTACTGCCCCCATCGCCGGCCCTTCCTCGGTCGGTCAAC
ACTGCCGCTCCCCTCCGGGTTCGGGTGACGTCAGCGGCAATGGTACGTTC
ACGGACGGAGAGACGGAAGCGACGGAAGTCGACTCGCACTTGGGTAGCTG
CAGCACGCGGCCTGGAGAAGAACAAGCAAGCGATGATGTATACTCAGGGA
GTGATGCGGAGGGGGTCACGGCCAACGAGACAAGCGATGATGGGGACGAT
GCGGAGAGCGAATCAAGTGAGGCATTTGGTTCGTGGGCGGCTGGTGTGGG
AAGTGGGGAGCATGGCAGCGGGCGAGGCGGGGTGGTCGGAAATGCGGCGG
TGGCGGTCACCAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig2945:1988..4350- >mRNA_H-paniculata_contig2945.8015.1 ID=mRNA_H-paniculata_contig2945.8015.1|Name=mRNA_H-paniculata_contig2945.8015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3186bp|location=Sequence derived from alignment at H-paniculata_contig2945:1988..4350- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGCGGCGGCTGCGGCGGCCGCTCACAAACTTAGGCAGGCAAAGGCTCA
CGCACACCTGCTGACGCAGGCGGCGAAGGCCCTCGCGTACGAGAAGTTGC
AGGCTGCGGCGGCTGCGGCGGCCGCTCACAAACTTAGGCAGGCAAAGGCT
CACGCACACCTGCTGACGCAGGCGGCGAAGGCCCTCGCGTACGAGAAGTT
GCAGTCCCAAGCATTCGAATTTTTGCGTGCGAAAGCGTCGGCTGCTGAGA
AATCCGCGGCCACGGGCAAGCTACCGCCGGTGCCACGATCAGTCCCCCCA
AGACACCAAGGGCAAGGGCAGCCGCCGCCGCCGCCGCCCCCACCACGCTC
GTCCACCCTAGCAGCATCCACGTTCCACTCGGCGCCGCTAGGATCCCAGG
CAACAAGAACGGCGACAGCGTTGACAGCGGATGGCGGTGGGGGCGGCGGG
GGCGGTGGGATCATGCTACGAGCAGGCCGTGATACGGCTCTAACGACGGC
AGCGACTGCGAGCCCGGCGCAGTCGGTGGTGACCGCGGTGGAGGAGGAGG
TGGAGGGAGAGGCGGCGAGGAAAGAGGTCAACGATGACCGAAATCGACAC
GAGTTCGTCAGGAGCAGCTCGATGCCGCGGCCGGGGGTGGGGAACGATGG
TGTGTGGTCTGACGTACTGGCGATAGCGCCGGGAACGGTGCGGCAGGCGG
TCGCACGAATGCAACGCGCTCAAGCAGCGGCCGAGGCAGCGGCGACGCCG
CAATCATCAACCGGCACCGGCCGAAAGAAGCTCTCTTCTCGGCTCGTGAG
GATCGATGGTCGTGTACGGAGCGGATCGGTGAAGCAACTCGCGACTGCCA
CCGCCACTGCGAGTGGTGTTCATGTGACGACGCCGGCATCGTACAAGCGC
TCGGTATCTGCGACGCTTCCGGATAAAACGGCAGTAGGTGATACTGCGGT
GGTGGTGGCGGCGCCCGCTGTCGACGCCCTGGCAGTTGCGGGAGCACACG
AGTCGGTAGGGAGGGCGCCGGCGGCAACGCAGAAGATGGAGGATGCAAAG
GCTTCCCTGCCCAATGCCGCAAAAGTAGCAGCGGGGGAAGAGAGGCTGCG
GGGAGTAGTTGGTGCTGCGCGTAGTAGTGAGGTGAGAGTCCCTGTTGGTC
TGTCAAGCCCTAGAGCTGCTGTTGATGTGAGCGCCGCCCCTCACCTGGGT
CTGCAGCAACAAGAGGCGAAAGAGAGGGACCGTCGGAGGGTGGACCTCAT
GATGGAAAGCCTCAAGAAGGCACAGGAGCTGTCAGGAAACAGCAGTCCCA
AGCATTCGAATTTTTGCGTGCGAAAGCGTCGGCTGCTGAGAAATCCGCGG
CCACGGGCAAGCTACCGCCGGTGCCACGATCAGTCCCCCCAAGACACCAA
GGGCAAGGGCAGCCGCCGCCGCCGCCGCCCCCACCACGCTCGTCCACCCT
AGCAGCATCCACGTTCCACTCGGCGCCGCTAGGATCCCAGGCAACAAGAA
CGGCGACAGCGTTGACAGCGGATGGCGGTGGGGGCGGCGGGGGCGGTGGG
ATCATGCTACGAGCAGGCCGTGATACGGCTCTAACGACGGCAGCGACTGC
GAGCCCGGCGCAGTCGGTGGTGACCGCGGTGGAGGAGGAGGTGGAGGGAG
AGGCGGCGAGGAAAGAGGTCAACGATGACCGAAATCGACACGAGTTCGTC
AGGAGCAGCTCGATGCCGCGGCCGGGGGTGGGGAACGATGGTGTGTGGTC
TGACGTACTGGCGATAGCGCCGGGAACGGTGCGGCAGGCGGTCGCACGAA
TGCAACGCGCTCAAGCAGCGGCCGAGGCAGCGGCGACGCCGCAATCATCA
ACCGGCACCGGCCGAAAGAAGCTCTCTTCTCGGCTCGTGAGGATCGATGG
TCGTGTACGGAGCGGATCGGTGAAGCAACTCGCGACTGCCACCGCCACTG
CGAGTGGTGTTCATGTGACGACGCCGGCATCGTACAAGCGCTCGGTATCT
GCGACGCTTCCGGATAAAACGGCAGTAGGTGATACTGCGGTGGTGGTGGC
GGCGCCCGCTGTCGACGCCCTGGCAGTTGCGGGAGCACACGAGTCGGTAG
GGAGGGCGCCGGCGGCAACGCAGAAGATGGAGGATGCAAAGGCTTCCCTG
CCCAATGCCGCAAAAGTAGCAGCGGGGGAAGAGAGGCTGCGGGGAGTAGT
TGGTGCTGCGCGTAGTAGTGAGGTGAGAGTCCCTGTTGGTCTGTCAAGCC
CTAGAGCTGCTGTTGATGTGAGCGCCGCCCCTCACCTGGGTCTGCAGCAA
CAAGAGGCGAAAGAGAGGGACCGTCGGAGGGTGGACCTCATGATGGAAAG
CCTCAAGAAGGCACAGGAGCTGTCAGGAAACAGCAGTAGAAGCAGCCTCA
ACCATAACCACAACGCAACAGAAACGCCTGCAGTGGCTACTGCCCCCATC
GCCGGCCCTTCCTCGGTCGGTCAACACTGCCGCTCCCCTCCGGGTTCGGG
TGACGTCAGCGGCAATGGTACGTTCACGGACGGAGAGACGGAAGCGACGG
AAGTCGACTCGCACTTGGGTAGCTGCAGCACGCGGCCTGGAGAAGAACAA
GCAAGCGATGATGTATACTCAGGGAGTGATGCGGAGGGGGTCACGGCCAA
CGAGACAAGCGATGATGGGGACGATGCGGAGAGCGAATCAAGTGAGGCAT
TTGGTTCGTGGGCGGCTGGTGTGGGAAGTGGGGAGCATGGCAGCGGGCGA
GGCGGGGTGGTCGGAAATGCGGCGGTGGCGGTCACCTAGAAGCAGCCTCA
ACCATAACCACAACGCAACAGAAACGCCTGCAGTGGCTACTGCCCCCATC
GCCGGCCCTTCCTCGGTCGGTCAACACTGCCGCTCCCCTCCGGGTTCGGG
TGACGTCAGCGGCAATGGTACGTTCACGGACGGAGAGACGGAAGCGACGG
AAGTCGACTCGCACTTGGGTAGCTGCAGCACGCGGCCTGGAGAAGAACAA
GCAAGCGATGATGTATACTCAGGGAGTGATGCGGAGGGGGTCACGGCCAA
CGAGACAAGCGATGATGGGGACGATGCGGAGAGCGAATCAAGTGAGGCAT
TTGGTTCGTGGGCGGCTGGTGTGGGAAGTGGGGAGCATGGCAGCGGGCGA
GGCGGGGTGGTCGGAAATGCGGCGGTGGCGGTCACC back to top
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