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Homology
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: A0A8B6XJ43_HYDVU (dnaJ homolog subfamily B member 6-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=A0A8B6XJ43_HYDVU) HSP 1 Score: 97.4 bits (241), Expect = 3.420e-20 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 130 YYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YY +LGVG A+D++IKKAYRKLAL WHPDKN DKK EAE +F+ I+EAYEVL D +KRN YD G
Sbjct: 5 YYSILGVGKSATDNDIKKAYRKLALKWHPDKNPDKKAEAEEMFKKISEAYEVLSDKEKRNVYDVYG 70
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: UPI00077A2B8B (dnaJ homolog subfamily B member 6-B-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A2B8B) HSP 1 Score: 93.6 bits (231), Expect = 5.080e-19 Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 130 YYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YYDVLGV ++SD +IKKAYRKLAL WHPDKN D KQ+AE F+ I+EAY+VL DP+KR YD G
Sbjct: 4 YYDVLGVPKNSSDQDIKKAYRKLALKWHPDKNPDNKQQAEENFKEISEAYDVLSDPEKRQVYDRYG 69
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: A0A5J4NDG8_9TREM (DnaJ subfamily B member 6 n=2 Tax=Paragonimus TaxID=34503 RepID=A0A5J4NDG8_9TREM) HSP 1 Score: 98.6 bits (244), Expect = 6.120e-19 Identity = 48/70 (68.57%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 118 SKPSYYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
S P YY VLGV DAS D+IKKAYR+LAL WHPDKN D K+EAE F+LI+EAYEVL D KRN YD G
Sbjct: 2 SDPDYYQVLGVRRDASSDDIKKAYRRLALKWHPDKNPDNKEEAEVRFKLISEAYEVLSDQSKRNIYDRYG 71
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: T2MIR3_HYDVU (DnaJ homolog subfamily B member 6 n=3 Tax=Hydra vulgaris TaxID=6087 RepID=T2MIR3_HYDVU) HSP 1 Score: 97.4 bits (241), Expect = 7.300e-19 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 130 YYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YY +LGVG A+D++IKKAYRKLAL WHPDKN DKK EAE +F+ I+EAYEVL D +KRN YD G
Sbjct: 5 YYSILGVGKSATDNDIKKAYRKLALKWHPDKNPDKKAEAEEMFKKISEAYEVLSDKEKRNVYDVYG 70
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: A0A3B1J264_ASTMX (DnaJ heat shock protein family (Hsp40) member B2 n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J264_ASTMX) HSP 1 Score: 93.2 bits (230), Expect = 9.000e-19 Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 130 YYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YYDVLGV AS D+IKKAYRKLAL WHPDKN D K+EAE F+ I EAYEVL D KR AYD G
Sbjct: 4 YYDVLGVSRSASQDDIKKAYRKLALRWHPDKNPDNKEEAERKFKEIAEAYEVLSDRSKREAYDTYG 69
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: Q86F63_SCHJA (DnaJ subfamily B member 6-A n=4 Tax=Schistosoma japonicum TaxID=6182 RepID=Q86F63_SCHJA) HSP 1 Score: 96.7 bits (239), Expect = 2.470e-18 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 130 YYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YY++LGV AS D+IKKAYR+LAL WHPDKN DKK+EAE F+LI+EAYE+L DP KRN YD G
Sbjct: 6 YYEILGVHKTASGDDIKKAYRRLALKWHPDKNPDKKEEAERQFKLISEAYEILSDPKKRNIYDRRG 71
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: A0A849H8L5_9BACT (DnaJ domain-containing protein (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A849H8L5_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 2.490e-18 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 130 YYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YYD LGVG DAS +++KKAYRKLAL +HPD+N+ K EAEA F+ +TEAYEVLRDP+KR YD G
Sbjct: 4 YYDRLGVGRDASTEDVKKAYRKLALKYHPDRNEGSK-EAEARFKEVTEAYEVLRDPEKRTTYDRFG 68
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: A0A7S0E6R0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E6R0_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 2.680e-18 Identity = 40/66 (60.61%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 130 YYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YY+VLGV DA + +IK+AYRKLA+ WHPDKN+D +++AEA+F+ + EAYE L DP+KR+AYD G
Sbjct: 30 YYEVLGVARDADEQQIKRAYRKLAVRWHPDKNRDSREQAEAMFKRVAEAYETLSDPNKRSAYDHHG 95
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: A0A0M0JAJ6_9EUKA (DNAj-like subfamily b member 2 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JAJ6_9EUKA) HSP 1 Score: 96.3 bits (238), Expect = 2.790e-18 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 124 PSYYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALGD 330
PSYY++LGV +AS DE+KKAYRK+A+ WHPDKNQDKKQ AE F+ I EAYEVL DP+K+ YD G+
Sbjct: 2 PSYYELLGVDKNASADELKKAYRKMAMKWHPDKNQDKKQVAEKKFKEIAEAYEVLSDPNKKEIYDRHGE 70
BLAST of mRNA_H-paniculata_contig294.8007.1 vs. uniprot
Match: A0A7S2Z782_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z782_9CHLO) HSP 1 Score: 92.8 bits (229), Expect = 2.870e-18 Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 133 YDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAEAVFRLITEAYEVLRDPDKRNAYDALG 327
YD+LGVG DA++ EIK+AYRK A+ WHPDKN D K+EAE F+L+ EAY +L DP+KR YDA G
Sbjct: 17 YDILGVGEDATESEIKRAYRKQAIKWHPDKNPDNKEEAELRFKLVAEAYGILSDPEKREVYDAYG 81
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Metazoa |
| Seed ortholog score | 97.1 |
| Seed ortholog evalue | 2.3e-17 |
| Seed eggNOG ortholog | 6087.XP_002158147.2 |
| Preferred name | DNAJB6 |
| KEGG ko | ko:K09509,ko:K09512 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0001671,GO:0001701,GO:0001890,GO:0001892,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006355,GO:0006457,GO:0006996,GO:0007010,GO:0007155,GO:0007275,GO:0008047,GO:0008104,GO:0008150,GO:0009653,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010466,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010941,GO:0010951,GO:0015630,GO:0016043,GO:0019219,GO:0019222,GO:0022414,GO:0022610,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030036,GO:0030154,GO:0030162,GO:0030198,GO:0030234,GO:0031072,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031674,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032781,GO:0032879,GO:0032880,GO:0033036,GO:0033365,GO:0034504,GO:0034613,GO:0042802,GO:0042981,GO:0043009,GO:0043062,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043154,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043281,GO:0043292,GO:0043462,GO:0044087,GO:0044092,GO:0044093,GO:0044183,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044449,GO:0044464,GO:0045103,GO:0045104,GO:0045109,GO:0045861,GO:0045892,GO:0045934,GO:0048471,GO:0048513,GO:0048519,GO:0048523,GO:0048568,GO:0048583,GO:0048598,GO:0048608,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0051082,GO:0051087,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051179,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051345,GO:0051346,GO:0051641,GO:0052547,GO:0052548,GO:0060255,GO:0060548,GO:0060589,GO:0060590,GO:0060669,GO:0060706,GO:0060710,GO:0060711,GO:0060713,GO:0060715,GO:0060717,GO:0061077,GO:0061458,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090083,GO:0090084,GO:0097159,GO:0097435,GO:0098609,GO:0098772,GO:0099080,GO:0099081,GO:0099512,GO:1900034,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1903867,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2001141 |
| EggNOG free text desc. | negative regulation of inclusion body assembly |
| EggNOG OGs | 38GYI@33154,3BBV4@33208,COG0484@1,KOG0714@2759 |
| COG Functional cat. | O |
| Best tax level | Metazoa |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03110 |
| Exons | 4 |
| Model size | 2917 |
| Cds size | 1380 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig294.8007.1 >prot_H-paniculata_contig294.8007.1 ID=prot_H-paniculata_contig294.8007.1|Name=mRNA_H-paniculata_contig294.8007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=460bp
MMTTKKSKPSYYDVLGVGVDASDDEIKKAYRKLALSWHPDKNQDKKQEAE
AVFRLITEAYEVLRDPDKRNAYDALGDREDGQGEEVSHGASEAAETEDVA
QHGGQEGAWGGWEGATGGAWERPMGTGGNGSTHAGLWGGNPYSQAGPYPR
QPHQQQSSFTQQQQRRPPSYGHYTKQEQQQFGATGAGNERMRVKTTVIHT
DVSMEPVQGNSDPGDGGAGDMKKPTYTPPPGYVPPPAYAPQAPHAPPSGV
YTPQAPSAPLGQAPPVLPEAMRSSFIPHSGLGNSYQYAQHSSHHPHGYPG
GGGIHVPEATSFAPPVTAFQVPPTNQPVCAPGAVLPPQGGGPLPPPQAGP
VDGGAYFVQQGSQHVMDQQHQQSLPVSQETKVAPQRRKSAPPTAPWWKFQ
RSRKDPYPKETRPTPQLPQDLNRYSMYPTENRAVDAAAVPQGTLNVFGGE
GKKGGAVFW* back to topmRNA from alignment at H-paniculata_contig294:13058..21462- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig294.8007.1 ID=mRNA_H-paniculata_contig294.8007.1|Name=mRNA_H-paniculata_contig294.8007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8405bp|location=Sequence derived from alignment at H-paniculata_contig294:13058..21462- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTCACTGTGTTCAAGTTAGGCTGTGACAAGTGTGGGAGCTACATTGC
TGATCACCGAAATATCTGGAGAAAGGAGAAGCACAAGAGAGATTGAATTA
TGATGACAACGAAAAAATCAAAACCTTCCTACTACGATGTGCTGGGTGTT
GGCGTGGACGCAAGCGACGATGAGATCAAGAAGGCTTATCGGAAGCTTGC
GCTGTCATGGCATCCGGTGAGTTCAACGCAGCAGGACGGGGTCAGTCTCA
AGTTGAGATATTTTCTCCGTCTGTAAGAGAAATTATTTCGATTGCTCTGA
GGGTACGTTGTATACATCATACACATATGTCTATTGCTGATTGATTGGCT
CTCTTGTCCAGCGCTTGTCTCATTTGATAAGACCGGTTGGTGCGTCTATG
CCTGTGGGATTCTGACCAAGTCCAGCAGGCTTGGGTTGTTTGTTTGCGTG
CACAATCAGAAGACAAAAGAGTCTGAACATTTTTCGAGAGCATTTCGTCT
GAATTAGAGAGAACTCACGTCACACGGAGAATTTGAACGCCAAACTAAAA
CTTTGATTCGGCGCGTTGACGGGGCAATTTTAGTGCCCGTGGCTGTGGAC
CAACGAGCTACTGCAGAGGTCACGAAGGCAGAGCGATGACGCCTTCTAGG
CATATAAAAATATTCCGCGCTGTTTCATACAGGTTTCTTGTTGGGCGAGC
TCGGTACACTAGGATGAGTTTCCAGCTTGTCTTCTGCTGTCGGGAAAACT
ATGCTGTGGTTTGCAGTTCGTGAGAGGGGGAAAGTGGAGGAAGCGTGTTT
TTTCTCGTTTTTGGATTGTTCTTTATCGTGTTCGATACAAAGTCGCAGTG
TTCGCTTTGTGGCGCTTTGGAGCGGGAAGTCGAGGGAGTCGTTAAACTGG
GGGTAAAGAGGCTACGTTGAAGCAAGCGGATTCGCACGTTCCGGTGGGTA
GAAGAGAAAGAAGAGGCGACGACCCATATTTTATATATGTATAAGACAAA
TCTCGACGAGTAGCTTGGCCGACGGGTACCTGTCTGTTCGGAGGCAGTTG
TTGCAACATTTCTCGAATATTCGTGTCGTCCAGACCGACAGAAGAGCCAG
CACAGTGTATAGTACAGTATATATCTCGTGGACAGTATACGAGGGGTATT
AACGTATTAACCCGTAAGCGAATTCCAGGGCTTGTGTTCGGGTTGAAGCG
AGAAGGCATGGGCGCCGACACCACCAAAGCAACGGGTACTACCCTCCTCT
TTCTTCGAAAAATGAAAAATAAGGGGCCTCACGCGCCGTCTCGCGCAACA
GACCCCGCTGCTCACCCAACTTGCCCCCATGACTATATTTTCTGGCCCTG
CTTGCTCTTCTGTCACCGCGTTGTTGTGCGATAATGATTGACATATAATC
TACTGGAGCACTGTAGCCCTACTGCCCGTCTGTCACCAGTGTACACAGGT
ACACCTCACTGAAACTACATTCAAATCACCAGCCCTAGCCCTGAATACAG
AAAACGACGCCTTGGTGGCTGAGTTTGAATGTAGTGTTGAGAGTGAGTAA
TTTAGTAATAGGTACAGTAGTAGTGGTAAGAAGAGACCTCAGATAGCTTG
TGCCCGACAAACGAGACAGACAGGCGAGCGTATGCTGAACATGCATTTTA
CAGATGAAGATAATGGTTTGGTGATGGATCGGATCGGATCGTGAGGTATA
AGAAGCTGGCCTTGACCTGCTACGACTATCGCGCTGACTACTCGTATGCA
TCAATTGCTTGGTGCCCTGTATCTATAATTCAGTATCTATAATTCAGTAT
CTCCATCCTGCTTTCGGTTCCAATAGGGTCAATCACACCACCACCTGTCA
CTGCCAATGTTATCATGGCTGTAGTGGTGTCCAGCAGACCATGATCTCAT
TACACCGCAACGGAGTGGTCTACAGGAGGTGTCCTTTACTGGATACGTGC
TGCAACAAATCACTAAACTACTGAGCTACGGCCAGCATTGGTTCTTTTGG
GCGCGTGCTGCTGCCCATCTCGCGTTCTTTTCGGTCGCCTCTCTGGCTCT
GTGGGTGATGTTGTGTTGGTCGTCACCATATAAGTGGTTTATTGTATTCT
TGCTGAGCTTGGGTGTGTCTAGTCTAAGCCGTACAGCTTGTCGTGCGTCC
ACGCATTTCCATCCAAACACGGAGGTGCTAGCTGCAACTATGGCTCATGC
AGATTTTTTTTTGTGTGTCCGACAGATCGATTTTCTTCATCCATTCAGCT
CAAGGCTCATAGCTTGTTCGGTGTCCACAAGGAGTCCATGCATCCTACAG
ATGAAACATTCATCCCCAGCAGTGGTGTCCCTCGCTGGCTGTAATGGTCT
AATTTCCTCACCGATGACACAGAATCCCCGGACTCGAATCCGAGTCGCAC
AGCTTGCTGCTTTTTGCACACTCAAGATTATATCCCAAATTCTCCTGTAC
ACACCCGTTGGTTTTTGGTCTTGACCACACGGGCAGGGGGCAACGCTGCA
ATACAGGCCCTTTCGTGGCGTTTTTCTTAACGTAGCCTCCTCTGACACTC
CCCTGTTGCAACCCATATGTATAGAGCTATGATTTAAACAAGAAGATATG
GAGGCATTTGATGCCATTTTTCGATGTGGGGAACCACCCCAACTCATGCT
GAACACAGTTTTAAGTCCCTCCGTGGCGTTGACACATAAGCGTCAGTATC
AGCAGTACGAGAGAGCATGGCCACTTTTTGAGGAGCCATAAAAAAAGCCA
CGAGAAAGAAGCTCTTCTAGCAAACACGTTCTGTTAGGTCGGTGACCATT
TGATAATACACTGTCCACCGTGATGTGGTCTAAGCCAGAAGCACCCTCAG
CGTGGTTGCAAACAGACTTGACTGTACGGTAACTGTCGCAGTGTACAGCT
AATAAGTTGGGAAACAGTCTATTCGGCGGGAAGCAGACAGTTGGGGTAGG
CGGGGTGAGATTCCTGTGGAGAATAACGACGTACATACACAACTAACCCA
CTGTAGGACTTGATGTTGAAGTTAAACATTAACCTGTTCTTTGAGTACGC
ACCCCTCGTGACTACAGATGGGCGTCCAAACAACCTGTCGTGAATCATAA
GACATGGATACTTTCAAGTCTACAGTAATATATCTACAGTATACTAGCTA
GCTTTGAACAGCTGGATGAGCATATCTCAGCTCGAAAAGGGAGTGTTGTG
TTTTTGCTGATGTAGACCCTATTATCTTGATTTACTTCAGAGTGAGGAAA
ACAGCCAAACGCAGTTCTTGTTTCGTAATGACCCCGAAAAAAACTAACTG
CACAGCGGATAAAAGGGTTGAAGACTGTTATCCTCAAAGGGTTAATTAGC
GCATTTACTCCCAATACCCCGGATTCAGTTGTTGGACAAGAAAAGCCATA
CCGTAATTCACGTCGAGAGTTACAATCGTTTTGGGCACACCCATGCCAAA
CTACAAGTCTGTGCTGTCTGTACTCTGAAGTTTCTCTGTCTGAACAGCGG
TTCCCGTGATCATGCCATATGATTCGCTTTCTCCCTGTCTTGGAGGTGGG
GACTAAACGGGGATTAACTTGGAGTCCGGCGTTGCATTTGACCGATCACT
GAAATCTTGTCACAACGTAGTTTAAAACTGGCTCATGTGAAGTTCGTTTT
GTTTCGATGAGACCGGGCGCGTCTCCACTATCTAGAACGTTGCGTTTCTG
CACAACGTATATATATGTTTTGATTTGTGTTTTTTATTTATCGTGCGTAA
GTAAAATAATATCGTTATAAAAAAATTTCCTTCCCCTTCCACTGCTGAAA
TCCCATTTTAATACACCTCCATTTTTGTTTGACAGTTTGTTGTCATGATT
TGTAATTTGCCCTTATGCGTTTTCTTCAAACCCGTGTTTCCCGTATGCTG
TTCCAGTGGTGAAAGTGTCCTTGGTGTTTTGGCAGGTGTGGCGTTGTTCC
TGCAATGAAGTGCACTTATCACTTGTTTCTCTTGCAACTGCTGCTTTTGG
CTACCAGGCACCACGCATATCGGCGTTCAATATTTTCAAGCATGTATCGT
ATACCAAAGACCGATTCAACTGAACTATTTACCTGCACCCCCCTTACCTG
TTTCTGTGCCGCCTCTGCTGCTACCTACGCTTGTTGGTTGGTCACACGCC
GACCGATCCCTCGATAACAATTGTGCGTCGCCCTTCAGGACAAGAATCAA
GACAAAAAACAAGAGGCAGAGGCGGTTTTCCGTCTTATAACAGAGGTATG
CACGTGACTTCAAGTTTTCGGCCCATCCTTGTCTTCGGCATATCTTGAAA
ATATTTTCACCCCCCTCCCCCCCCCGCATGGATGCAGTTTCAACACAAAA
AAGTAGAATTTGACACCAAAGAAATGTAGAGCGCTGCAGTCGTTGTGGGC
AAAACTACGCCAACTAGGAGTCTGTGCTGTATGTATTATATGTGCAGAAC
TATATTTCTGAACAGCAACGGGGCGTGTCCCCGTAATTTTTTTCTTTTCC
GTCGTTTTCCCCGTCTTTCAGGTGGGGATTAGACGGGGTCCAGGGTAAAA
GCGTCAAGAAGTAATCGCGGGCCCCATTCAGAGAGTCGTATCTTGTGTAT
GTATCACATGTGAAATATTACGTCTTTTTCCCAGATCTTTTCAAGTGGCA
TTAAAATGTATCGTGCTGTAGGTCGGCAGCTTTTTTTAAAAGGAACAGAT
TTACCCAGAAGCGCGCATGGGTGTACGTGGTGGCAAAGAAAATAACAGGA
GGCGAGGCCTCCTTGGCTGAGTAGTGTAACCCGTTTTTTCCGATGTTTTT
ACCTGGTCTGCCGCTAGTCCAAATCTCGTTCCCTCCGCATGCGCGGTTGC
GGATTGCGGCCGAACAAAAGCGTACATGAGATACCCTGGCCATTGTTTTA
TACGACGTGATGTCACCATGTGTGTGCCGAACAGTACAGTATTGTACATT
TCAGAATTATCATACACGGCGAAAACGATACACGCACGAATCGTGCGTGC
ACTATTGTTGATTGATTGTAGTCAACTCATCACTGCTATATCCATGGAAG
TCCTCCTTCGTCGTCGCACATGACTAACATGAGTGCATTTTACTATGGCA
CAAATAAATACACAACCAGGCATACGAGGTTCTGAGAGACCCGGACAAAC
GTAACGCGTACGATGCTTTGGGGGACCGGGAAGATGGGCAGGGCGAAGAG
GTTTCGCACGGAGCCTCCGAAGCTGCTGAGACTGAAGATGTCGCCCAGCA
CGGAGGTCAAGAGGGAGCCTGGGGTGGGTGGGAAGGGGCGACGGGAGGGG
CATGGGAAAGGCCAATGGGGACTGGAGGAAACGGCAGCACTCATGCTGGT
TTGTGGGTGAGTAGACAAATTCACAAGGTACTCATAGTTGGAGGCCCTTG
AGTTCCCCACATTACTGTATGTATCCACTAGTACTTGCTGTTGCTTGGTG
CTGTACTGGGAAGTTTTATCGTTTTCTGGGGGGGCTACTCTGTGAGAATA
CTTGAATTAATCGTGTGCTGTACTGGGGGGTTTTGTTGTCTTGGGATGAG
TTTTGTACTGCGAGAAAATGTTCAGTTTTACTTCGGGGTTGGGAGGCATA
CTAGAGGAGGGTGGACGGTAAGCACATTGGATCGATGCCGATTCAGGAAA
AAATGGGCCCTTCGGAGGCTTGACGCGGTCGAAACGGAAACATGTGGTGA
ATCAGCTTAGCTAGTTGGGCTTACGGTGATTATTATTGTTTTCTGTGCGG
GAAATCGCAGCAATTGAACGGTCGCCTCTGCCTGGTAGTTGTATGGATAG
CAAGCAAGTTTTTGTCTGTCATGTTACCCTGGTGGAACTCTTTGCCATCG
TGCTTGTTTGTTTCCTATGAATTGGTCGAACGCCAAGCTTCCCTTCTCCG
ACACCAACCTTAGTGAATCACTCCCCCCCCCCCCTCCCCCTCCCGCTGTC
GGTTGCCCCCCCCCGAAAAACATCCACGTGATTATTAATTGCCAGCAGGG
TGGGAATCCCTACTCGCAAGCAGGTCCATACCCACGGCAGCCTCATCAAC
AACAAAGCAGTTTCACGCAGCAGCAGCAGCGGCGTCCGCCCTCGTATGGA
CATTATACGAAACAGGAGCAGCAGCAGTTTGGCGCTACCGGCGCTGGCAA
CGAGCGCATGAGAGTAAAAACCACCGTCATCCACACAGATGTATCTATGG
AACCGGTGCAGGGTAACTCCGATCCGGGAGACGGAGGTGCTGGAGATATG
AAGAAACCAACTTATACGCCCCCACCGGGTTACGTACCCCCGCCGGCCTA
CGCACCCCAAGCGCCTCACGCACCCCCATCGGGGGTCTACACGCCACAGG
CTCCGTCCGCACCGCTCGGCCAGGCCCCGCCGGTTCTCCCCGAGGCCATG
CGAAGCTCCTTCATTCCCCACTCGGGTTTGGGAAATTCTTACCAATACGC
CCAACATTCGTCTCACCATCCCCATGGATACCCAGGGGGCGGTGGAATTC
ATGTGCCCGAGGCGACGTCATTCGCGCCCCCAGTAACCGCCTTCCAGGTA
CCCCCAACGAACCAGCCCGTATGTGCCCCAGGCGCAGTGCTGCCCCCTCA
GGGTGGGGGGCCGCTGCCACCGCCGCAGGCGGGGCCGGTGGACGGGGGGG
CATATTTTGTTCAGCAGGGCAGCCAACATGTCATGGACCAACAGCACCAG
CAGTCGCTGCCCGTGTCTCAGGAGACGAAAGTTGCCCCTCAACGGCGAAA
ATCAGCGCCCCCCACCGCCCCTTGGTGGAAATTCCAGCGCTCGCGCAAAG
ATCCCTACCCTAAGGAGACTAGACCTACCCCTCAGCTGCCTCAGGATTTG
AATCGATACAGCATGTACCCCACGGAGAACCGCGCCGTGGACGCGGCCGC
GGTGCCGCAAGGAACGTTGAACGTGTTCGGTGGAGAGGGCAAGAAGGGGG
GAGCGGTGTTTTGGTAAACACTTACGTGGAAGTGGGCGTGTGGGTCGGGC
GAGGGAGAAGGGAAAGCGGGGTTGAGGTGGCCAATGTGAAAAGGCGGCGG
CGGTTGCGGCGGTAATTACCGTGGAAGCCCCCCCCATCCACAGCTATGTT
GGTATGCTTCGGATTTTCGCAAGCCAAGAAAAATACGATTTGGCGATGCC
GCGGGATACAGAAGTGGAGTAATTTTGCGAGATTTTGTGCGTTTCGCGGT
ATTGTAGATTGTTTTTCATGTACAGAGGGAGCACAGTACTGGGAGGCGGT
TAATTACGTATCTAGATTATTTGATACTGATGTGTTTGATTAATATGGGC
ATGTGAGGATATGTAAGTTTTTCGGGGGGGGCTTGTGAAAATGGGCGGTA
AGTGTGCGCTTGCCCCCGTATAGGCGGGCATTTTTGAAAATCATGATATT
TCATTTCACAGTTTACGATAACGTGTATTTTAGCTTGTGGTTTTGCACGT
CTTTCGGTGCAAATCATTAGGCACAAGGAAAACAATTTGTCAGGTGTGAA
ATATCGAAAATGTTCAAGGTTGGTGGCAGAGGGAGGCGTTTGGTCATGTG
CGCACAAAGCGGGCGCCGTGGGAATGATATGCAGACATGCGCGTTTGGAG
GGGTTTACTTGCATCCTTTGTATTTTGGTCATTTTAAGAGTTTCGCCTTT
GTTGGCGATTTTATTTATTCAGATATTCTGGGACCGTGTTAAGTAGAGAT
CACCTATCCGGCTTGGCGTTTTGCGGATGTCTGCGGTTGGTTTGATCGTG
CTCTACTATCGTGAGCGCAGCCCCACCCGCCGCGAGAGGGTTGTATGAGA
GTAAACACGAGATCTCATCGGGGGCTGGGTTAATGGTGATGACCACGGTA
GGACGGGGATGGCAAGCATTTCTGTCGAGCGAGCGAGATTGATGGAAGAC
TTGACACTGGCGCATACAAATCCTGATGTACATGGTGTGAACCATTTATA
CCCTACAAGTTATGATGGATGTATCGCATCTGGTGATATGAATACAATAG
TTTTTATTCTGGTGTGTGGTACTTGCGTGGTACACCGTGATTTTACCTTG
GTGTGTAGTGTTTCTTCTGAACTATGATACTTATGGGCATTACAGTGTGC
GTATTAGCCTTCTCTTGTTGATACTCTTGAATCGTGTGTACCCTTATACG
GAATATATATATATATATATATATATTCCTTATAAGGGAAAAATGGCAAG
GCAAATAACAAAAAATATGAAATCGGACATAGCCTGGTTAGTGTATTGCT
TTTAGTCGTGTACCGAAATGAGCTATAGCGAGCGGGGTGTTTTCGTTGTT
TCCGCAGCGCAAACTCACTGTTTTTGAATTTCTTTCGCCGCGACACGGCT
TGGGATCTTTGGTACAATAGCGAACAAATGTGATTCATCTAACGCGAAAA
TAATC back to topCoding sequence (CDS) from alignment at H-paniculata_contig294:13058..21462- >mRNA_H-paniculata_contig294.8007.1 ID=mRNA_H-paniculata_contig294.8007.1|Name=mRNA_H-paniculata_contig294.8007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at H-paniculata_contig294:13058..21462- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGACAACGAAAAAATCAAAACCTTCCTACTACGATGTGCTGGGTGT
TGGCGTGGACGCAAGCGACGATGAGATCAAGAAGGCTTATCGGAAGCTTG
CGCTGTCATGGCATCCGATGATGACAACGAAAAAATCAAAACCTTCCTAC
TACGATGTGCTGGGTGTTGGCGTGGACGCAAGCGACGATGAGATCAAGAA
GGCTTATCGGAAGCTTGCGCTGTCATGGCATCCGGACAAGAATCAAGACA
AAAAACAAGAGGCAGAGGCGGTTTTCCGTCTTATAACAGAGGACAAGAAT
CAAGACAAAAAACAAGAGGCAGAGGCGGTTTTCCGTCTTATAACAGAGGC
ATACGAGGTTCTGAGAGACCCGGACAAACGTAACGCGTACGATGCTTTGG
GGGACCGGGAAGATGGGCAGGGCGAAGAGGTTTCGCACGGAGCCTCCGAA
GCTGCTGAGACTGAAGATGTCGCCCAGCACGGAGGTCAAGAGGGAGCCTG
GGGTGGGTGGGAAGGGGCGACGGGAGGGGCATGGGAAAGGCCAATGGGGA
CTGGAGGAAACGGCAGCACTCATGCTGGTTTGTGGGCATACGAGGTTCTG
AGAGACCCGGACAAACGTAACGCGTACGATGCTTTGGGGGACCGGGAAGA
TGGGCAGGGCGAAGAGGTTTCGCACGGAGCCTCCGAAGCTGCTGAGACTG
AAGATGTCGCCCAGCACGGAGGTCAAGAGGGAGCCTGGGGTGGGTGGGAA
GGGGCGACGGGAGGGGCATGGGAAAGGCCAATGGGGACTGGAGGAAACGG
CAGCACTCATGCTGGTTTGTGGGGTGGGAATCCCTACTCGCAAGCAGGTC
CATACCCACGGCAGCCTCATCAACAACAAAGCAGTTTCACGCAGCAGCAG
CAGCGGCGTCCGCCCTCGTATGGACATTATACGAAACAGGAGCAGCAGCA
GTTTGGCGCTACCGGCGCTGGCAACGAGCGCATGAGAGTAAAAACCACCG
TCATCCACACAGATGTATCTATGGAACCGGTGCAGGGTAACTCCGATCCG
GGAGACGGAGGTGCTGGAGATATGAAGAAACCAACTTATACGCCCCCACC
GGGTTACGTACCCCCGCCGGCCTACGCACCCCAAGCGCCTCACGCACCCC
CATCGGGGGTCTACACGCCACAGGCTCCGTCCGCACCGCTCGGCCAGGCC
CCGCCGGTTCTCCCCGAGGCCATGCGAAGCTCCTTCATTCCCCACTCGGG
TTTGGGAAATTCTTACCAATACGCCCAACATTCGTCTCACCATCCCCATG
GATACCCAGGGGGCGGTGGAATTCATGTGCCCGAGGCGACGTCATTCGCG
CCCCCAGTAACCGCCTTCCAGGTACCCCCAACGAACCAGCCCGTATGTGC
CCCAGGCGCAGTGCTGCCCCCTCAGGGTGGGGGGCCGCTGCCACCGCCGC
AGGCGGGGCCGGTGGACGGGGGGGCATATTTTGTTCAGCAGGGCAGCCAA
CATGTCATGGACCAACAGCACCAGCAGTCGCTGCCCGTGTCTCAGGAGAC
GAAAGTTGCCCCTCAACGGCGAAAATCAGCGCCCCCCACCGCCCCTTGGT
GGAAATTCCAGCGCTCGCGCAAAGATCCCTACCCTAAGGAGACTAGACCT
ACCCCTCAGCTGCCTCAGGATTTGAATCGATACAGCATGTACCCCACGGA
GAACCGCGCCGTGGACGCGGCCGCGGTGCCGCAAGGAACGTTGAACGTGT
TCGGTGGAGAGGGCAAGAAGGGGGGAGCGGTGTTTTGGTAAGGTGGGAAT
CCCTACTCGCAAGCAGGTCCATACCCACGGCAGCCTCATCAACAACAAAG
CAGTTTCACGCAGCAGCAGCAGCGGCGTCCGCCCTCGTATGGACATTATA
CGAAACAGGAGCAGCAGCAGTTTGGCGCTACCGGCGCTGGCAACGAGCGC
ATGAGAGTAAAAACCACCGTCATCCACACAGATGTATCTATGGAACCGGT
GCAGGGTAACTCCGATCCGGGAGACGGAGGTGCTGGAGATATGAAGAAAC
CAACTTATACGCCCCCACCGGGTTACGTACCCCCGCCGGCCTACGCACCC
CAAGCGCCTCACGCACCCCCATCGGGGGTCTACACGCCACAGGCTCCGTC
CGCACCGCTCGGCCAGGCCCCGCCGGTTCTCCCCGAGGCCATGCGAAGCT
CCTTCATTCCCCACTCGGGTTTGGGAAATTCTTACCAATACGCCCAACAT
TCGTCTCACCATCCCCATGGATACCCAGGGGGCGGTGGAATTCATGTGCC
CGAGGCGACGTCATTCGCGCCCCCAGTAACCGCCTTCCAGGTACCCCCAA
CGAACCAGCCCGTATGTGCCCCAGGCGCAGTGCTGCCCCCTCAGGGTGGG
GGGCCGCTGCCACCGCCGCAGGCGGGGCCGGTGGACGGGGGGGCATATTT
TGTTCAGCAGGGCAGCCAACATGTCATGGACCAACAGCACCAGCAGTCGC
TGCCCGTGTCTCAGGAGACGAAAGTTGCCCCTCAACGGCGAAAATCAGCG
CCCCCCACCGCCCCTTGGTGGAAATTCCAGCGCTCGCGCAAAGATCCCTA
CCCTAAGGAGACTAGACCTACCCCTCAGCTGCCTCAGGATTTGAATCGAT
ACAGCATGTACCCCACGGAGAACCGCGCCGTGGACGCGGCCGCGGTGCCG
CAAGGAACGTTGAACGTGTTCGGTGGAGAGGGCAAGAAGGGGGGAGCGGT
GTTTTGGTAA back to top
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