|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 992 |
| Cds size | 732 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig293.7990.1 >prot_H-paniculata_contig293.7990.1 ID=prot_H-paniculata_contig293.7990.1|Name=mRNA_H-paniculata_contig293.7990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
MLPGGSTSRFPGLGQQPPAATVRPSMWYRFHVDLTANSSGVSVKSLIREA
ESARRKAAAAAASSAARVSPRPAGSTAPFSNGGAATASGPGTATTPAAFT
NGVNGSNGLTTPGARDGAGDSAVGTIRQPRSVDGDFVATTGEVNRTGQPA
REAGTAKRPTPDTINAEDVTGPEQSELAKIKNTSEDIHPASELLRDKNRM
SGGLSLIERLELKYGGVASGHMPDSDQESSDMSSQEEPSSAEES back to topmRNA from alignment at H-paniculata_contig293:25111..26866- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig293.7990.1 ID=mRNA_H-paniculata_contig293.7990.1|Name=mRNA_H-paniculata_contig293.7990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1756bp|location=Sequence derived from alignment at H-paniculata_contig293:25111..26866- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGTCACCCGCTCCTGATTCGTACTTTACTCCTTCATTGGACTCTCTGTG
TCGGGGTGTTGCCTTGGAGTGCCTAGAGCGGGCTCCGCCCCTTCTCTCTA
GTATCTCTACTTTTACCGCATTCTTGAACTGATTGAGCTGCTGTACTGTT
GAGTCGCATACTAAATAAGGAGCTCCGCAATATCCCAGGATTTTGTGGTT
TGAATTTGAACACCATCTCAGAGAAGCCGCTCCGCCTGAGCGACCAACCT
CTACAACGAAATGTTGCCGGGAGGTTCCACATCGCGTTTTCCGGGACTCG
GTCAACAGCCACCGGCTGCTACAGTACGTCCATCCATGTGGTACAGGTAA
ATCTGGCTATGTTGTCGGTGGTAAGTATATGTTCACTTCTGCTGTGATTT
GTTCCTGCTTTTTTTGTTCCGCGCGGTGTTCGATCTACTCGCATCTCAGT
GCAACTCCAGTCAGTAGAGCTCTACGGTCCTCCTGTAGAGCGACAGAACT
ACAGATGTATCCCCTTTATTGTACCAGGTACTGCACACCCTAAGAGACCA
CGAGGCAGTTCACCAGAGTCCATTGGTAATCTGCATGGGTTACCTCCTTT
GCGAATACAACGATAGAGATGTTGGGGAATGTTCAGTGCATGTATCGACT
TCTTTTTTGGATATATCTTCGGTTGCTTGTCTATTGTCACATGAAGGCAG
TACAGTATCTTCCGTCCAGTGGTCAGACCTGTGCACCCGTATCACCATCG
CCATGACCGCACATGCTGATACAACACGCACATACGTCAAATGTCAGCTG
TACACCTTATTGTTCTGTGTGGTAAGCAGTGACCTCTCCTTTCCTCATTG
CCAAGCAGATTTCATGTCGACCTCACGGCAAACTCCTCTGGGGTAAGTGT
CAAAAGCTTGATACGAGAAGCTGAAAGCGCGAGGCGAAAAGCGGCAGCCG
CCGCCGCCTCCAGCGCCGCGAGGGTATCCCCGAGACCCGCTGGGAGCACC
GCGCCATTCTCCAACGGCGGTGCGGCAACTGCCAGCGGACCAGGGACAGC
GACAACGCCGGCTGCTTTCACGAACGGGGTCAATGGTAGCAATGGATTAA
CGACGCCTGGGGCGCGAGATGGAGCTGGGGACTCGGCTGTGGGAACGATC
AGGCAACCGAGATCAGTCGACGGCGACTTTGTCGCCACAACCGGTGAAGT
AAACAGAACGGGTCAACCTGCGAGGGAGGCAGGGACGGCGAAGGTGAGGA
CACAAATGCAACGTCGCATCTGGCGCGGCTATTGAGGGGGAAGAGCGGTC
ATTTGTGTACTTTATATTTTCAAGTACACCGCGTCGTCTAGTCAACACCA
CCTAGACTCGCGAAGAGAGCGACGACGTATACACAAAGGACGTTTCCCTT
CTAGCCTTCCTAATAGTCACCTATTTACTTTTCATTTGTCTTTCGAAACG
TGCATCGTCCACCCTTTCGTAACCGTAATGCTTCGCTTCGCTCAGAGACC
AACACCTGACACAATCAACGCTGAAGATGTGACCGGACCAGAACAGAGTG
AACTGGCAAAAATTAAAAATACTTCAGAGGATATCCACCCGGCGAGCGAA
CTGCTCCGCGATAAAAATCGCATGAGCGGCGGACTGAGTCTCATTGAGCG
TCTGGAGCTCAAGTATGGCGGCGTGGCGTCGGGACATATGCCAGATTCAG
ATCAGGAAAGCAGCGACATGAGTAGCCAAGAGGAGCCCAGCAGCGCGGAA
GAGAGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig293:25111..26866- >mRNA_H-paniculata_contig293.7990.1 ID=mRNA_H-paniculata_contig293.7990.1|Name=mRNA_H-paniculata_contig293.7990.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig293:25111..26866- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGCCGGGAGGTTCCACATCGCGTTTTCCGGGACTCGGTCAACAGCC
ACCGGCTGCTACAGTACGTCCATCCATGTGGTACAGATGTTGCCGGGAGG
TTCCACATCGCGTTTTCCGGGACTCGGTCAACAGCCACCGGCTGCTACAG
TACGTCCATCCATGTGGTACAGATTTCATGTCGACCTCACGGCAAACTCC
TCTGGGGTAAGTGTCAAAAGCTTGATACGAGAAGCTGAAAGCGCGAGGCG
AAAAGCGGCAGCCGCCGCCGCCTCCAGCGCCGCGAGGGTATCCCCGAGAC
CCGCTGGGAGCACCGCGCCATTCTCCAACGGCGGTGCGGCAACTGCCAGC
GGACCAGGGACAGCGACAACGCCGGCTGCTTTCACGAACGGGGTCAATGG
TAGCAATGGATTAACGACGCCTGGGGCGCGAGATGGAGCTGGGGACTCGG
CTGTGGGAACGATCAGGCAACCGAGATCAGTCGACGGCGACTTTGTCGCC
ACAACCGGTGAAGTAAACAGAACGGGTCAACCTGCGAGGGAGGCAGGGAC
GGCGAAGATTTCATGTCGACCTCACGGCAAACTCCTCTGGGGTAAGTGTC
AAAAGCTTGATACGAGAAGCTGAAAGCGCGAGGCGAAAAGCGGCAGCCGC
CGCCGCCTCCAGCGCCGCGAGGGTATCCCCGAGACCCGCTGGGAGCACCG
CGCCATTCTCCAACGGCGGTGCGGCAACTGCCAGCGGACCAGGGACAGCG
ACAACGCCGGCTGCTTTCACGAACGGGGTCAATGGTAGCAATGGATTAAC
GACGCCTGGGGCGCGAGATGGAGCTGGGGACTCGGCTGTGGGAACGATCA
GGCAACCGAGATCAGTCGACGGCGACTTTGTCGCCACAACCGGTGAAGTA
AACAGAACGGGTCAACCTGCGAGGGAGGCAGGGACGGCGAAGAGACCAAC
ACCTGACACAATCAACGCTGAAGATGTGACCGGACCAGAACAGAGTGAAC
TGGCAAAAATTAAAAATACTTCAGAGGATATCCACCCGGCGAGCGAACTG
CTCCGCGATAAAAATCGCATGAGCGGCGGACTGAGTCTCATTGAGCGTCT
GGAGCTCAAGTATGGCGGCGTGGCGTCGGGACATATGCCAGATTCAGATC
AGGAAAGCAGCGACATGAGTAGCCAAGAGGAGCCCAGCAGCGCGGAAGAG
AGCAGACCAACACCTGACACAATCAACGCTGAAGATGTGACCGGACCAGA
ACAGAGTGAACTGGCAAAAATTAAAAATACTTCAGAGGATATCCACCCGG
CGAGCGAACTGCTCCGCGATAAAAATCGCATGAGCGGCGGACTGAGTCTC
ATTGAGCGTCTGGAGCTCAAGTATGGCGGCGTGGCGTCGGGACATATGCC
AGATTCAGATCAGGAAAGCAGCGACATGAGTAGCCAAGAGGAGCCCAGCA
GCGCGGAAGAGAGC back to top
|