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Homology
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: D8LKB4_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKB4_ECTSI) HSP 1 Score: 206 bits (523), Expect = 2.570e-58 Identity = 114/138 (82.61%), Postives = 121/138 (87.68%), Query Frame = 2
Query: 281 MAENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAMGGVA--AAAKKVXXXXXXXESGDIGDEPDADN 688
MAENKTPEFEPPQACVQRVIK+VLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPL+EYL+QYRREASAKKQ KA G A AAAKK GD+ +EP+AD+
Sbjct: 1 MAENKTPEFEPPQACVQRVIKSVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLKEYLDQYRREASAKKQSKAAMGAAGPAAAKK------GEAGGDMMEEPEADD 132
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: A0A6V1RK43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RK43_HETAK) HSP 1 Score: 148 bits (373), Expect = 7.260e-38 Identity = 70/89 (78.65%), Postives = 82/89 (92.13%), Query Frame = 2
Query: 287 ENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLE 553
ENK PEFEPPQAC+QR++KAVLPDN+QIGKDAKAAF+R+AGIFIMYLTACANDFCRE+KRQTI+ DVM AI ELEF +L EPL+++LE
Sbjct: 30 ENKPPEFEPPQACIQRIVKAVLPDNIQIGKDAKAAFARAAGIFIMYLTACANDFCRESKRQTITGPDVMMAISELEFHDLVEPLKDFLE 118
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: A0A7S2SN07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN07_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.550e-33 Identity = 70/108 (64.81%), Postives = 86/108 (79.63%), Query Frame = 2
Query: 293 KTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAMGGVAAA 616
K PEFEPPQACVQR+IK+ LPDN QI K++KAAFS++AGIFI+YLT CANDFC+E KR TIS+ DVM A++ELEF +L PL E+L YR++AS KK A VA+A
Sbjct: 67 KLPEFEPPQACVQRIIKSALPDNCQITKESKAAFSKAAGIFIIYLTTCANDFCKENKRSTISSADVMSAMRELEFHDLMGPLEEFLTNYRKDASTKKDGVAAATVASA 174
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: A0A7S2DWQ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DWQ9_9STRA) HSP 1 Score: 137 bits (344), Expect = 2.730e-33 Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 2
Query: 266 KAERSMAENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAMGGVAAAA 619
+ ER ENK P+FEPP ACVQR+IK VLPD+ QI K++K AFS++AGIFI+YLT CANDFC+E KR TIS+ DV+ A++ELEF +L PL E+L YR++ +AKK++ AA A
Sbjct: 11 ETERKEKENKMPDFEPPMACVQRIIKGVLPDSCQITKESKTAFSKAAGIFIIYLTTCANDFCKEGKRSTISSADVLAALRELEFHDLIGPLEEFLAHYRQDTNAKKELGNSSAKAAHA 128
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: A0A7S3HH50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH50_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.160e-30 Identity = 62/114 (54.39%), Postives = 86/114 (75.44%), Query Frame = 2
Query: 278 SMAENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAMGGVAAAA 619
+MA+++ +FEPP ACV RV+KA LP+N+ + KDA+AAF R+AGIFI YLT C+NDFCRE+KR TI QDVM A++EL F + E+PL E+LE Y++++ +K + V AAA
Sbjct: 7 NMADSRPQDFEPPMACVSRVMKAALPENILLTKDARAAFVRAAGIFIFYLTHCSNDFCRESKRATIFPQDVMAALRELGFEDFEKPLEEFLEAYKKDSEQRKPVPRTKTVGAAA 120
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: K8Z488_NANGC (DNA polymerase epsilon subunit 3 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z488_NANGC) HSP 1 Score: 121 bits (304), Expect = 6.770e-28 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 2
Query: 257 GSTKAERSMAENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAMGGVAAAAKKVXXXXXXXESG 658
G +A + +K+PEFEPP + V ++I+ + D+VQ+GK+AKA F+R AGIFI+Y+TACANDF RE KR TI+A DV QA+KELEF ++ EPL+E+L + E K +IKA+ AA ++V E G
Sbjct: 44 GEKEAPTAATVSKSPEFEPPLSSVTKIIRRAVGDSVQVGKEAKATFTRVAGIFILYITACANDFSREGKRATITANDVYQALKELEFEDMVEPLQEFLRRSNEEKKNKAEIKAIRKREAAEEEVGDSGGEKEVG 177
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: A0A4D9CZ16_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ16_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.530e-26 Identity = 60/114 (52.63%), Postives = 84/114 (73.68%), Query Frame = 2
Query: 257 GSTKAERSMAENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAM 598
G +A + +K+PEFEPP + V ++I+ + D+VQ+GK+AKA F+R AGIFI+Y+TACANDF RE KR TI+A DV QA+KELEF ++ EPL+E+L + E K +IKA+
Sbjct: 68 GEKEAPTAATVSKSPEFEPPLSSVTKIIRRAVGDSVQVGKEAKATFTRVAGIFILYITACANDFSREGKRATITANDVYQALKELEFEDMVEPLQEFLRRSNEEKKNKAEIKAI 181
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: A0A7S2WSI8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WSI8_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.030e-25 Identity = 56/102 (54.90%), Postives = 77/102 (75.49%), Query Frame = 2
Query: 302 EFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAMGGV 607
EFEPP ACV+R++K+ LP + +GKDA +AF+R+ GIF++YLTACANDF RE KRQTI+A D+M +IKEL+F E L +LEQ+R+E K++ K G+
Sbjct: 32 EFEPPLACVRRLLKSSLPTSTNVGKDASSAFARACGIFVIYLTACANDFARENKRQTITANDIMASIKELDFDEFTPQLTGFLEQHRKEEKEKRERKKASGL 133
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: W7TTI8_9STRA (Dna polymerase epsilon subunit 3 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTI8_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.240e-25 Identity = 55/98 (56.12%), Postives = 76/98 (77.55%), Query Frame = 2
Query: 257 GSTKAERSMAENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYL 550
G +A + +K+PEFEPP + V ++I+ + D+VQ+GK+AKA F+R AGIFI+Y+TACANDF RE KR TI+A DV QA+KELEF ++ EPL+E+L
Sbjct: 68 GEKEAPTAATVSKSPEFEPPLSSVTKIIRRAVGDSVQVGKEAKATFTRVAGIFILYITACANDFSREGKRATITANDVYQALKELEFEDMVEPLQEFL 165
BLAST of mRNA_H-paniculata_contig2907.7925.1 vs. uniprot
Match: A0A7S1D791_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D791_CYCTE) HSP 1 Score: 114 bits (285), Expect = 2.170e-25 Identity = 54/105 (51.43%), Postives = 77/105 (73.33%), Query Frame = 2
Query: 302 EFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLTACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAKKQIKAMGGVAAA 616
EFEPP ACV+R++K LP + +GKDA AAF+R+ GIF++Y+TACANDF RE++RQTI+A DV+ ++KEL+F E L +L+++R +K+ KA AAA
Sbjct: 31 EFEPPLACVRRILKNALPSSTNVGKDASAAFARACGIFVIYITACANDFARESRRQTITANDVLASVKELDFDEFSPHLEAFLDRHRAAEKSKRDAKAKAARAAA 135
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 208.0 |
| Seed ortholog evalue | 5.4e-51 |
| Seed eggNOG ortholog | 2880.D8LKB4 |
| Preferred name | POLE3 |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K02326 |
| KEGG Reaction | R00375,R00376,R00377,R00378 |
| KEGG Pathway | ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko05166,map00230,map00240,map01100,map03030,map03410,map03420,map05166 |
| KEGG Module | M00263 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000082,GO:0000123,GO:0000228,GO:0000278,GO:0000731,GO:0000785,GO:0000790,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005671,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006271,GO:0006272,GO:0006281,GO:0006301,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006342,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0008622,GO:0008623,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010212,GO:0010332,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019985,GO:0022402,GO:0022607,GO:0022616,GO:0031010,GO:0031055,GO:0031248,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031490,GO:0031491,GO:0031492,GO:0031497,GO:0031507,GO:0031974,GO:0031981,GO:0032502,GO:0032991,GO:0033260,GO:0033554,GO:0034061,GO:0034080,GO:0034401,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0036211,GO:0040029,GO:0042276,GO:0042575,GO:0042766,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043486,GO:0043543,GO:0043596,GO:0043933,GO:0043966,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0044877,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046982,GO:0046983,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051716,GO:0060255,GO:0061641,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070603,GO:0070828,GO:0070868,GO:0070869,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071824,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090399,GO:0097159,GO:0097549,GO:0104004,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1902292,GO:1902315,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1902969,GO:1902975,GO:1903047,GO:1903506,GO:1903507,GO:1904949,GO:1990234,GO:2000112,GO:2000113,GO:2001141 |
| EggNOG free text desc. | DNA-directed DNA polymerase activity |
| EggNOG OGs | KOG0870@1,KOG0870@2759 |
| Ec32 ortholog description | DPB4 class protein with histone-like transcription factor (NF-YB subunit) domain |
| Ec32 ortholog | Ec-01_009630.1 |
| EC | 2.7.7.7 |
| COG Functional cat. | K |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03400 |
| Exons | 5 |
| Model size | 1933 |
| Cds size | 792 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2907.7925.1 >prot_H-paniculata_contig2907.7925.1 ID=prot_H-paniculata_contig2907.7925.1|Name=mRNA_H-paniculata_contig2907.7925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp
MAENKTPEFEPPQACVQRVIKAVLPDNVQIGKDAKAAFSRSAGIFIMYLT
ACANDFCREAKRQTISAQDVMQAIKELEFGELEEPLREYLEQYRREASAK
KQIKAMGGVAAAAKKVGGVEAEAESGDIGDEPDADNDNGVVPDADDGMGE
DGGTGAAAGAVAGQVEGAAAQQPHADGSNGAAVVASPAAAAAQGGIDKSS
MDVEEARPEPPSAAQSAEAPAAGAGPAPMDEDDGVATSIGGGASSAMAPA
VAGQGGAGETNGN* back to topmRNA from alignment at H-paniculata_contig2907:288..6043- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2907.7925.1 ID=mRNA_H-paniculata_contig2907.7925.1|Name=mRNA_H-paniculata_contig2907.7925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5756bp|location=Sequence derived from alignment at H-paniculata_contig2907:288..6043- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCAAATGAAAAGGATACGCAGTACAGACAGCGAGGGGAAAAACAGCGTG
GTTGTCTCTACTGTAGGGGTTTCGAGAGGAACACCTGTGACACAACCCCA
ACACGTGCGTGCACCAACACTTTGGCAAGACGAGGGCACAGCCAAGTGAG
GGCTTTCGAAGACAGCTTAAGGCAAAAACCTTCTACATATAGGAAGAGAA
GCCACAGGTACAGAAGCCACTCCATCACTCCTTGAAGGGAGTGTCACTTT
TTCCACATGTACCAACATAGAGGACACACACCTAATCTCCTCACAACGAC
GATACAGATTAAGAGCCTTAATGTACTTCGTAGCAAATTGGAGAATCGCG
GAACAAATATCTCTTGTTTGCGCTCACCGCCTGCGCCTTGATGAAAGAGT
CTGGACTCTTGAGCTCCAGCTTGATCTCCGCTATCGTGGCTGAAATATAG
TCTGACGGGTCTCGCTTGTTCGCACGGATACCCTTGACCACATCTTGCAA
GGTTTTCTCGAACATACTCACTCAACTGTTGTCTGCTGTGTATGTTTTGC
ACAAGAGGCTGCACAACAGTATAGTACAGTGAAGGAACAGGAAGTGCGGA
CAGCAGTACTACCTCCAGGGGCAGTGGGTCTATAATAAACCAAGCCCACT
ACTGCCTTAAAAGTACGACAGACAGCACGCGAACACACACGCACGCGCTC
ACTAACATACGCACAAATTTCTTCTCGGAGCAGTGCTCAAGCTATACTAT
CTTATGCCCAGGGCTAACCTTTTGCTGTGTTATCGCGTGCCTAAAGCGGA
AAGGAATTGTCCTCGTAATTTGTATTTCGGAATGTCATCACTTATGGTCA
TGCTCCAATCTACGCCCCAGGTCACACTGCTGTCGACCGCTGCATCCACA
GGAAGGGACGATTTGAAAGGGATCCACAAAGGCAGAGAGAAGCATGGCTG
AAAACAAGACGCCCGAGTTTGAGCCACCTCAGGTGATGCTAGTGTTTTTT
TTAGGGAGAGTTCTGTCGAAGCGGTCGTTTATGGCAGTTTTGGGGAAAAT
TTGAATTGTTTTTTGCGGCACATATCGATCTCTCCTATTTTCGCAGACAT
TCAGGCTAGCTTCGAGAGGGTGTGTGGGTGTGCTCTGGTGTACTGTACTT
TACTCTAGTTGTACTCGTCATCTTGCCCTCCTGATGGCGACTGGACCCCA
TCTCCCCGGGCTCGTACAAGTTGGTTATTCTGTATTAGGATAATTGGACT
GCTTTCATGCCAGTAATGATGTGTGTTCTCTTTGTTTTCTTCAGCGAAAA
TACTAGACACAAGTGTTCAAAGCTTGATGAATTATTTTGTCCGAGCAAGG
TTTTGGTATTGTATTACCTACCCAAGAGTATGTTGACCTTCCACTGTCCG
GGCCTTCGTCCTAGGGCCACTTCTTATCGTGGTGGGAAAAAAATATGTTG
GAAAATCACTTTTTTGCCCTTTGCAGCCATTTTTAACTCGGAGAGCAGGA
TATTCGGCTTCTGCCACCTCACGGTTTGTTCAGGATATCCGGCACATATT
TCCGTTTCCCCAGGCGTGTACTTAGACTTTGGATCGAATTTGGAACTTCC
TGAACAAACCGTTCAAGACTGCAAAAATTTGAAAAATTCCCAGACTTTGA
GGTTGTATAAACAGTTTGTCCCCCAAATTCCAAGTTCGACCCAAAGTTAT
ACTGCACGCCTCGGGAAACGGAAATGTGTGTCGGATCCCTCTTACTATCT
AGTGGAGATCGTTCCGAGGTGGTAGAAGCCGAATATCCCGCTCTCCGTGG
TAAAAACGACGACAGCCAAAAAATGATTTTTCCATTATCACCATAAGGAG
CGCCCAAAGTAGGACACCGCCAATAAGATTCTTAGTACCGATTTTCAAAT
AAAGCTTAGGCTACTACGGATCATTATAGTGAGGCATTTAGGGGGTGGGG
GGGTTGTTCGTTGCGTTATTGCTCACAAGGGGGTTCTTTCGTGGGTGAGC
CGAGCTTGGTCTCATGTGTATGTTATCGTCTCAACCATAGCATTTTCAGT
ACTCACCAGGGAAATGAATCACGATACTGGACTACGCCCTATGCACCGTA
TCGTGTTAGATCTGGCACCGAAATAGGCGCCAAGATCTGTATTTCAATCC
AAGAGGCGCGAGGTCGCGGTGCGGCGGAATTGTCAGTGTCCCAGTTTTTA
GACATGCACGCTCACTAGAGTACAAGCCCTTGCCTCATCGACAATTATCC
GCCGTTTTTATGACCACGGGTCTGAGGGGTCGGACCAGGGTTAAGGAGGA
AAAAAACGTTAAATGTATTTACTGCCATGGTATGTACTACGAATACCGTC
GCAACACACCATGTCGAAAGAATCCCTATTATATAAGGTCTGACAAGGTG
CAGACTATCTGTGGCTGTCGGCTCTTGTTGGGATGAACCGTTTGTTTTGC
TCTGTTGTGTGTCCACGCATTCCAGTGTAAAGACGCCACTCTATAAGAAT
TTGCAAAAACAAGGCGCGGGGGCACAGGTAGGAAGTGGGAGAGAAAGTTG
CGACACCTCGATTTAATTGTATATCCATGATGTTAATATCCGAAGGCGTG
AAGTCCATGCTGTGCCCATTTACTGATACGTCTTTAAGCTCGTTGTGCGC
TTGACTGGATCCCTGGCACTTAACTTCATTGCTAGTGCCCCCCTCCCACG
CTGTAGCGTGCGGCTTACCTCGCCGTACCCCATCCACATCATTGGTATGT
CAATTCACTCAAGTCAATCGTGACCATTCGTTTTCGTGGTTTGGGTTTTT
GGTGGTTGTCTGGGTGTACTGACTGTTGTACTGCACTGCGCATATTCTTG
ACCTTGCAACCCTTCTTTTATGTTGCAGGCGTGTGTTCAGCGAGTGATCA
AGGCGGTGTTGCCGGATAACGTCCAGATCGGAAAGGACGCGAAGGCTGCG
TTCTCCCGGAGCGCCGGCATCTTCATCATGTGATATTTTGGAGAATTTTT
TCGGTTCAATTTTTAATCCAGCGCTTTGCAAAAAATATAGGACAGAGTGC
GCGGCGTTCTGTTGGTGTTGCGGATGCAAACGTTTTGAGTCATACACTCC
CACTCCTGCGGTAGCTACAGCACGTGCTGTTTACCTGCTGTCTTGCTGGG
GCGTACTGGGACTGTATTCGCATCTCTCAGGACCATGTAGTATCATGGAA
TGTCTGGCGTTAGGGGGCAATTGGGCATGATGTCTTGAGGGGATCTTCTC
CGTTGGCCGAAGGGAACTGGCTGAATAAATTAAATCTACGTCAGCGACAC
AACCGTCTACATATGTTATGTTCGTCTTTGGTTGAAGGAAAGTCAAGTAG
GCGAGTTTTGATCTTACACGACAAGATCTTTTGTGTCTACGACCACCAAA
ACGCACATTTTGGAGACGAAGTCACCAAATGTGGAGAAAATCCCCCAACA
TCGGTGTTCTTTTTAGCCACACAATGCGCACGTCCTTTTTTACGGTGGTG
CTTTTCTCGTCTTCGAACAGCATGATCCTTGTCACCATGACCTGTGGCGT
TCTTGGTCCACGTCACCCATAGTATTTTTTTGCATCATCACAGCAGACAG
ACAACACGCTCTTGGATGGAAAAGGAAAACTGCTCCGAAAAATCACCATT
GTATTACTTTCAAACGAGCCACATCTGTGATTTGTTAAGACAGTTTATTT
CTTCGTTTGATTAGTACTTCCTGTAGTAACAGCTGCCAACGATAGATAAG
GTACAAGGGTTAACAGATGGCAGTTTCTCCCCCAATGGATATCAGCGTGA
GCTTTCCGGTCGAAAAGGGATAACTTGGTACAATACTATTAAAATATGAC
TATGTTCTCGCTGGACTGTCTGCCTGCTGTTCTCAGGTATCTGACCGCGT
GCGCTAATGACTTCTGCCGAGAGGCCAAACGGCAGACAATCAGTGCGCAG
GACGTGATGCAGGCGATCAAGGAATTGGAATTCGGGGAGCTGGAGGAGCC
GCTCAGAGAGTATTTAGAGCAGGTGGCCAAAATACACATGATATGCATTA
CGGTACTGCCTTTGTAAGGCTGTGATATATACCTATAATGTATAGATCCT
AAGGCACCCGCTCGTTCAACCAATCCTTCATGCCGTTCCATTTCAACTTT
GTTTCGCGATTTGAGAGGAACAAAAGCAACTCGTTCCTGTACGTCTCATG
TACACTTTTCTCAGCTCGTTCTCACATGTGCAGTCATTATCTCATTATCC
ACGACTCCGCCACTGCACCTCACCCGCACACGCGGAACACGTGCTCAACC
GAACCGAATCGTCGCGTCGCGTTTCCGCTCCATCGTAACCTCGATTTCCG
CCGGCATCTAACCCGCTCCCCGGCAAAAGTACCGTCGGGAGGCTAGCGCA
AAGAAGCAAATCAAGGCGATGGGCGGCGTGGCGGCGGCGGCGAAAAAGGT
CGGCGGAGTAGAAGCAGAGGCCGAATCGGGCGATATTGGAGACGAGCCGG
ACGCAGACAATGACAACGGAGTAGTGCCAGACGCAGACGATGGTATGGGA
GAAGACGGGGGAACGGGGGCGGCGGCGGGGGCCGTGGCGGGACAGGTCGA
AGGCGCGGCGGCACAACAACCACATGCGGATGGTAGCAACGGTGCTGCTG
TTGTCGCTTCTCCTGCTGCCGCTGCTGCGCAAGGAGGTATCGACAAATCG
AGCATGGACGTTGAAGAAGCTAGACCAGAGCCACCGTCAGCCGCGCAATC
CGCTGAAGCGCCCGCCGCGGGGGCTGGCCCGGCGCCAATGGACGAGGACG
ATGGTGTGGCGACGTCGATCGGGGGGGGGGCGTCGTCCGCCATGGCTCCT
GCAGTTGCCGGACAAGGTGGTGCGGGCGAGACCAACGGGAATTGAGAGTA
GCGCTATTATTTTGTGGACGGAAGCGGGGAAGGAGGGGAGGAAGGGACGA
CAGCTGGGAGAGAGGGTCGTAGCGAGCAACAGTTGCCGTCTGGTTTATTT
TATATGGTGGTGGCAAGCGGAGCCGCTGGACAACCCTGCTTGTCGATTCA
TCGACCCCCACCCCCCGGCGTGAAAATTGAATAAAAGCACGTTCTTTCAC
GTTAGTTCTCGGTGCGCTGGCATATGCAATGCACGGTGATTGTAGTAGCG
CGTAAATACCGCGACGTCCTGTAGACTCCTTTTTCAGTTATTCATAAATG
TTCCATCTCTGCCGTCGAGGGTCGCGACGTATTGTGTGTATTTGTTTGTG
TCGAGTGTTTGGTTTGGCGACCGATTCAAAGAGCGGGTTATGGGTGGTAT
TCTTGTTATTAAAGTGTTGAATTTATCGTTATCAAGGATCTGCTAATGTG
ACGACACATTGTATGTAATGGATAAACATGATGCTCCAAAACCCTGGGAG
AATTACAGTAAAAAGCGGTGAAAACATACGGGTTGCTGGCTGTCCCCTCG
TTGTGAACGTATGTCGTGCGTCCTCGAGGCCGATGTGTTGTGAACACGTT
TCTATGGGTCTTCAGAGATACTCTTATGAGGGAGGCTACCTATCGGCCGC
TCTTGCGCGTCTGTATGCTATCGGTGGTGGCACTGTGGAATCTTGTATAT
TTTTAGAGTTGATCCCCATTTAAAAAAACACTCAGTCGACGAAAGGCCAC
ACATATATTTATATATATTCAAAATCAGTCTGGTCGCATGAATCTGAGTT
ATTGACCTTTTTGGAATATATTTCGCAGATTTGAGATCAATCAAAACCCG
AATATA back to topCoding sequence (CDS) from alignment at H-paniculata_contig2907:288..6043- >mRNA_H-paniculata_contig2907.7925.1 ID=mRNA_H-paniculata_contig2907.7925.1|Name=mRNA_H-paniculata_contig2907.7925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig2907:288..6043- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGAAAACAAGACGCCCGAGTTTGAGCCACCTCAGATGGCTGAAAA
CAAGACGCCCGAGTTTGAGCCACCTCAGGCGTGTGTTCAGCGAGTGATCA
AGGCGGTGTTGCCGGATAACGTCCAGATCGGAAAGGACGCGAAGGCTGCG
TTCTCCCGGAGCGCCGGCATCTTCATCATGCGTGTGTTCAGCGAGTGATC
AAGGCGGTGTTGCCGGATAACGTCCAGATCGGAAAGGACGCGAAGGCTGC
GTTCTCCCGGAGCGCCGGCATCTTCATCATGTATCTGACCGCGTGCGCTA
ATGACTTCTGCCGAGAGGCCAAACGGCAGACAATCAGTGCGCAGGACGTG
ATGCAGGCGATCAAGGAATTGGAATTCGGGGAGCTGGAGGAGCCGCTCAG
AGAGTATTTAGAGCAGGTATCTGACCGCGTGCGCTAATGACTTCTGCCGA
GAGGCCAAACGGCAGACAATCAGTGCGCAGGACGTGATGCAGGCGATCAA
GGAATTGGAATTCGGGGAGCTGGAGGAGCCGCTCAGAGAGTATTTAGAGC
AGTACCGTCGGGAGGCTAGCGCAAAGAAGCAAATCAAGGCGATGGGCGGC
GTGGCGGCGGCGGCGAAAAAGGTCGGCGGAGTAGAAGCAGAGGCCGAATC
GGGCGATATTGGAGACGAGCCGGACGCAGACAATGACAACGGAGTAGTGC
CAGACGCAGACGATGGTATGGGAGAAGACGGGGGAACGGGGGCGGCGGCG
GGGGCCGTGGCGGGACAGGTCGAAGGCGCGGCGGCACAACAACCACATGC
GGATGGTAGCAACGGTGCTGCTGTTGTCGCTTCTCCTGCTGCCGCTGCTG
CGCAAGGAGGTATCGACAAATCGAGCATGGACGTTGAAGAAGCTAGACCA
GAGCCACCGTCAGCCGCGCAATCCGCTGAAGCGCCCGCCGCGGGGGCTGG
CCCGGCGCCAATGGACGAGGACGATGGTGTGGCGACGTCGATCGGGGGGG
GGGCGTCGTCCGCCATGGCTCCTGCAGTTGCCGGACAAGGTGGTGCGGGC
GAGACCAACGGGAATTGATACCGTCGGGAGGCTAGCGCAAAGAAGCAAAT
CAAGGCGATGGGCGGCGTGGCGGCGGCGGCGAAAAAGGTCGGCGGAGTAG
AAGCAGAGGCCGAATCGGGCGATATTGGAGACGAGCCGGACGCAGACAAT
GACAACGGAGTAGTGCCAGACGCAGACGATGGTATGGGAGAAGACGGGGG
AACGGGGGCGGCGGCGGGGGCCGTGGCGGGACAGGTCGAAGGCGCGGCGG
CACAACAACCACATGCGGATGGTAGCAACGGTGCTGCTGTTGTCGCTTCT
CCTGCTGCCGCTGCTGCGCAAGGAGGTATCGACAAATCGAGCATGGACGT
TGAAGAAGCTAGACCAGAGCCACCGTCAGCCGCGCAATCCGCTGAAGCGC
CCGCCGCGGGGGCTGGCCCGGCGCCAATGGACGAGGACGATGGTGTGGCG
ACGTCGATCGGGGGGGGGGCGTCGTCCGCCATGGCTCCTGCAGTTGCCGG
ACAAGGTGGTGCGGGCGAGACCAACGGGAATTGA back to top
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