mRNA_H-paniculata_contig290.7901.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig290.7901.1
Unique NamemRNA_H-paniculata_contig290.7901.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: D7G7V3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V3_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 6.410e-153
Identity = 224/316 (70.89%), Postives = 267/316 (84.49%), Query Frame = 3
Query:  219 PTQTGVEMLLGVETSAGLLGLGALGAMRAFTSSITPKRVRVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQEPLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMALGAEVLLPPLTVETVMVSVE 1166
            P Q    ML G++   G+ GL AL A+R FT+SITPKRVRVVTDIDDTVKSSGNKRL G+PLGGIDAQY RG FYPGVFQFSLEL+RYRVPSWQEPLSVAVLTARAREFLFALEIGD+HEI+ EFR+CG+RN +K WGRGPVLYGSVKEW+C SRKS RKARNF  L+EDD +GG GRP GAEGGY+F+GDTGEGD RAGE+MS ++P+R+RAVFLHVVSD  +Q  V +P+D+ VN VPVVYFRTYVGAAVKAV+LGLMDK GLENVI  A++A++ VP+ SSKW+D+N+D+ MA  +E  LP + V+T+  +++
Sbjct:   59 PLQRAASML-GMDAGLGVAGLSALSAVRLFTASITPKRVRVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYRVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVCPSRKSERKARNFGFLLEDDEKGGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAEHPDRMRAVFLHVVSDGPQQGKVPVPMDRVVNAVPVVYFRTYVGAAVKAVELGLMDKKGLENVITAAKEAMTKVPRQSSKWEDINRDLMMAQTSETQLPSIGVKTLTSALD 373          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A835YMG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG4_9STRA)

HSP 1 Score: 281 bits (719), Expect = 9.600e-87
Identity = 150/261 (57.47%), Postives = 184/261 (70.50%), Query Frame = 3
Query:  333 VRVVTDIDDTVKSSGNKRLLG-IPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQEPLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQAL--SAVPQTSSKWKDLNQDIAMA 1106
            +RVVTDIDDTVKSSGN RL G IPLGGIDAQY RG+FYPGVFQF LELA + VP    PL +AVLTARA+E LFALE+   H +S+ +R+CG  N ++ WG GP+LYGSVKEWIC +RKS RK +NF +L+E DG+    R    E  YVF+GDTGEGD +AG  M   +P  LRA+FLH+V      D   +P D  VN VPV++F+TYVGAA KA + GL+++  +E VIA A + L  S  P+TSSKW DL  DI  A
Sbjct:    3 LRVVTDIDDTVKSSGNLRLAGVIPLGGIDAQYERGQFYPGVFQFGLELAAHGVPRGLMPLPIAVLTARAKELLFALELDMEHPVSVAYRQCGAENGMEGWGLGPILYGSVKEWICWTRKSRRKVKNFRRLMELDGRNAIARGYMTE--YVFIGDTGEGDFKAGIKMCENFPRELRALFLHMVYCV--DDVCKVPEDYAVNGVPVLFFKTYVGAARKAYEAGLLNRYAVERVIAKAVEELEYSGAPRTSSKWSDLEADIEAA 259          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A835YPL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL0_9STRA)

HSP 1 Score: 272 bits (696), Expect = 7.750e-83
Identity = 146/260 (56.15%), Postives = 177/260 (68.08%), Query Frame = 3
Query:  339 VVTDIDDTVKSSGNKRLLG-IPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQEPLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADA--RQALSAVPQTSSKWKDLNQDIAMAL 1109
            VVTDIDDTVKSSGN RL G IPLGGIDAQY RG+FYPGVFQF+LELA +  P    PL VAVLTARA+EFLFALE+   H +S+ +R+CG  N    WG GPVLYGSVKEWI  +RK  RK +NF +L+E DG   H    G    Y+F+GDTGEGD +AG  M   +P  LRA+F+H VS     +    P D  +N VPV++F+TYVGAA KA + GLMDKAG++ VI  +     LS  P+  SKW+D+  DI  AL
Sbjct:   38 VVTDIDDTVKSSGNLRLAGLIPLGGIDAQYERGQFYPGVFQFALELAAHGTPQGLLPLPVAVLTARAKEFLFALELKTEHPVSIAYRQCGTDNGFDGWGLGPVLYGSVKEWIVWTRKGRRKFKNFKRLMEIDGT--HAAARGCATDYIFIGDTGEGDTKAGVKMCETFPRELRAMFMHAVS--CDSEYCITPDDYTINGVPVLFFKTYVGAARKAYEAGLMDKAGVQRVIDRSVMELELSGAPRDCSKWEDMEMDIEQAL 293          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A1E7FEW2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW2_9STRA)

HSP 1 Score: 248 bits (634), Expect = 2.470e-73
Identity = 131/264 (49.62%), Postives = 176/264 (66.67%), Query Frame = 3
Query:  321 TPKRVRVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQE--PLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMA 1106
            T +  +V++D+DDT+KSSG   + G+ LGGID QY RG FYPGV +F L+L+ Y++       P ++A+LTARA EF  ALEI D  ++S+  R  G++  ++ WG GPVLYGSV EWI   RK LRK  NF +L++ D       P G    Y++VGD GE D  AGE M  +YPE ++AVFLHVV+D      + IP  K +N  P+V+FRTYVGAAV AVQLGLM+  GL++VI  A + LS VP+TS KWKD+ +D++ A
Sbjct:   58 THRFTQVISDVDDTLKSSGGVNVGGVALGGIDVQYGRGDFYPGVAEFMLQLSLYKLLQQDSNYPANIAILTARAEEFKAALEIKDGSKLSIALRSAGEKAGIEGWGVGPVLYGSVAEWIIQDRKGLRKFTNFERLMQQD-------PAGVIFQYIYVGDVGELDQEAGETMVREYPEVVKAVFLHVVTDQADVPPI-IPAPKFINGRPIVFFRTYVGAAVDAVQLGLMNLDGLQSVINAAIEKLSDVPETSDKWKDIRKDLSRA 313          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A6V2PZW2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PZW2_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.260e-73
Identity = 142/291 (48.80%), Postives = 182/291 (62.54%), Query Frame = 3
Query:  300 RAFTSSITPKR--------VRVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRV---PSWQE-----------PLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMA 1106
            RA TSS+   +         +V++D+DDT+KSSG   + G+ LGGID QY RG FYPGVFQF LEL+ +++   P+  E           P  VAVLTARA EF  ALE+  + +++  FRK G++  ++ WG GPVLYGSV EW+   RK LRK  NF +L+E D       P G    YV+VGDTGE D  AGE M  +YPE ++AVFLHVVSD        IP  K +N  P+V+FRTYVGAA KAVQLGLM + GL  VI +A  AL  VP+++ KW DL +DI+ A
Sbjct:   42 RAATSSLNMAQQQELYHPFTQVISDVDDTLKSSGGVNVAGVALGGIDVQYERGDFYPGVFQFMLELSMHKLGEGPNESEGDDTGEEDRLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIEDWGLGPVLYGSVAEWVIQDRKGLRKFSNFERLIEQD-------PTGTIMQYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVSDA---PFPRIPPPKLINGRPIVFFRTYVGAAAKAVQLGLMYEEGLMRVIVEAEAALEGVPRSNEKWLDLERDISEA 322          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A7S0UKK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKK8_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.260e-72
Identity = 128/257 (49.81%), Postives = 171/257 (66.54%), Query Frame = 3
Query:  336 RVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQEPLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMA 1106
            +V++D+DDT+KSSG   + G+ LGGID QY RG FYPGV +F L L++  +     P ++A+LTARA EF  ALEI +  ++++  R  G++  +  WG GPVLYGSV EWI   RK LRK  NF +L+E D       P G    Y++VGDTGE D  AGE M  +YPE ++AVFLHVV+D +    + IP  K +N  PV++FRTYVGAA+ AVQLGLM   GL++VI  A + LS VP+ S KWKD+ +D+A A
Sbjct:   55 QVISDVDDTLKSSGGVSVGGVALGGIDVQYDRGDFYPGVGEFMLALSQCGLTEEVNPANIAILTARAEEFKAALEIKEGSKLAVALRSAGEKVGINGWGVGPVLYGSVAEWIAQDRKGLRKFTNFERLIEQD-------PTGTIFQYIYVGDTGELDQEAGETMLREYPEVMKAVFLHVVTDDVEGPPL-IPPPKLINGHPVIFFRTYVGAAIDAVQLGLMSLDGLQSVIEAATEKLSDVPENSDKWKDIRKDMARA 303          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: W7UBU9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBU9_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.360e-71
Identity = 133/281 (47.33%), Postives = 182/281 (64.77%), Query Frame = 3
Query:  333 VRVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQEPLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMALGAEVLLPPLTVETVMVSVEKSG 1175
            ++V+TDIDDTVKSSG  RL+G+ LGGID QY RG++YPG FQF+LEL+R+ VP  +EP  VAVLTARAREF FALE+  SH++   +   G  N ++ WG G VLYGSVKEW+C SRK LRK RNF  L   D      R    +  YVFVGDTGE D +AGE M  +YP R++A+F+H VS++  + +   P D+ + +VPV+YFRTYVGAAVKA +LGL+  +G+E V+A   + +      + + K   +  A A     ++  + +    +   K+G
Sbjct:  106 LQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQD------RLDRTD--YVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVSES--RPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGGSATGEGKGRRKRKATAEQVAEVMADIALAEAFMGRSKAG 376          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A7S4CYL7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CYL7_9EUGL)

HSP 1 Score: 248 bits (633), Expect = 3.750e-71
Identity = 139/261 (53.26%), Postives = 172/261 (65.90%), Query Frame = 3
Query:  333 VRVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQEPLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAV-PQT---SSKWKDLNQDIAM 1103
            ++V+TDIDDTVKSSG  +  GIPLGGID QY RG FYPGVF+F LELA Y     + PLSVAVLTARAREFLFALE+ +SH I   FR  G  +  + WG G VLYGSV+EW+C  RKS RK  NF  L+          P  A   +VFVGDTGE D  AGE+M  ++P  ++A+FLHVV+         +P DK +N  PVV+FRTYVGAA KAV+ GL+   GL  V+  AR  L  + P++   SS+W DLN+DIA+
Sbjct:  215 LQVITDIDDTVKSSGGVKFGGIPLGGIDTQYRRGLFYPGVFRFMLELASYATT--EAPLSVAVLTARAREFLFALELDESHAICKAFRDTGRASGHEDWGIGEVLYGSVQEWVCQGRKSWRKVENFKLLLSS-------LPPDAARRFVFVGDTGELDQEAGEIMLEEFPSCMQALFLHVVAPDPALVPAPLPRDKLINGAPVVFFRTYVGAARKAVKYGLLGVDGLAAVVEAARADLERIEPESAGGSSRWADLNRDIAL 466          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A7S2IAS8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAS8_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.110e-71
Identity = 133/270 (49.26%), Postives = 172/270 (63.70%), Query Frame = 3
Query:  336 RVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQE-------------PLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMA 1106
            +V++D+DDT+KSSG   + G+ LGGID QY+RG+FYPGVFQF LEL+   + +  +             P  VAVLTARA EF  ALE+  + +++  FRK G++  +  WG GPVLYGSV EW+   RK +RK  NF +L+E D       P G    YV+VGDTGE D  AGE M  +YPE ++AVFLHVVSD        +P  K +N  PVV+FRTYVGAA +AVQLGLM + GL  VI +A  AL  VP ++ KW DL +DI+ A
Sbjct:   74 QVISDVDDTLKSSGGVTVAGVALGGIDIQYTRGEFYPGVFQFMLELSMPTLDNDDDENDTENEKSQFLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIDDWGLGPVLYGSVAEWVIQDRKGMRKFSNFERLIEQD-------PTGTIMQYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVSDA---PFPRVPPPKLINGRPVVFFRTYVGAAARAVQLGLMQEEGLMRVIVEAEAALKGVPTSNEKWLDLERDISEA 333          
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Match: A0A448ZMT4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMT4_9STRA)

HSP 1 Score: 241 bits (615), Expect = 2.670e-70
Identity = 131/267 (49.06%), Postives = 170/267 (63.67%), Query Frame = 3
Query:  312 SSITPKRVRVVTDIDDTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQ--EPLSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGSVKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGDARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRTYVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMA 1106
            S   P   +V++D+DDT+KSSG   + G+ LGGID QY RG FYPGV +F L ++ Y +P      P  +A+LTARA EF  ALEI +  ++++  R  G +  +  WG GPVLYGSV EWI   RK LRK  NF +L++ D       P G    YV+VGD GE D  AGE M  +YPE ++AVFLHVV+D     T  IP  K +N  P+V+FRTYVGAAV AVQLG+MD  GL+ V   A + L+ VP+TS KW+DL +D+A A
Sbjct:   68 SRFRPPFTQVISDVDDTLKSSGGVNVGGVALGGIDVQYERGDFYPGVGEFMLGMSLYGLPKEDVTSPAKIAILTARAEEFKAALEIKEDSKLAVALRSAGVKAGIDGWGIGPVLYGSVAEWIVQDRKGLRKFTNFERLIQQD-------PTGMIFQYVYVGDVGELDQEAGETMLREYPEVVKAVFLHVVTD-QADVTPIIPAPKYINGRPLVFFRTYVGAAVDAVQLGMMDLLGLKAVAEAAIEKLAGVPKTSDKWEDLQKDLARA 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig290.7901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V3_ECTSI6.410e-15370.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YMG4_9STRA9.600e-8757.47Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YPL0_9STRA7.750e-8356.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7FEW2_9STRA2.470e-7349.62Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A6V2PZW2_9STRA3.260e-7348.80Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S0UKK8_9STRA1.260e-7249.81Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
W7UBU9_9STRA1.360e-7147.33Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4CYL7_9EUGL3.750e-7153.26Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2IAS8_9STRA5.110e-7149.26Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A448ZMT4_9STRA2.670e-7049.06Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig290contigH-paniculata_contig290:5734..10291 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score455.3
Seed ortholog evalue3.1e-125
Seed eggNOG ortholog2880.D7G7V3
Hectar predicted targeting categorysignal peptide
EggNOG OGs2AJYC@1,2RZ89@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_000190.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size2005
Cds size1245
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig290.7901.1prot_H-paniculata_contig290.7901.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig290 5790..9587 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929884.2321043-UTR-H-paniculata_contig290:5733..57891622929884.2321043-UTR-H-paniculata_contig290:5733..5789Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig290 5734..5789 +
1691481054.3065703-UTR-H-paniculata_contig290:5733..57891691481054.3065703-UTR-H-paniculata_contig290:5733..5789Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig290 5734..5789 +
1622929884.2913558-UTR-H-paniculata_contig290:9587..102911622929884.2913558-UTR-H-paniculata_contig290:9587..10291Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig290 9588..10291 +
1691481054.3492258-UTR-H-paniculata_contig290:9587..102911691481054.3492258-UTR-H-paniculata_contig290:9587..10291Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig290 9588..10291 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929884.2493227-CDS-H-paniculata_contig290:5789..61561622929884.2493227-CDS-H-paniculata_contig290:5789..6156Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig290 5790..6156 +
1691481054.3179376-CDS-H-paniculata_contig290:5789..61561691481054.3179376-CDS-H-paniculata_contig290:5789..6156Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig290 5790..6156 +
1622929884.2642183-CDS-H-paniculata_contig290:7546..81631622929884.2642183-CDS-H-paniculata_contig290:7546..8163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig290 7547..8163 +
1691481054.327614-CDS-H-paniculata_contig290:7546..81631691481054.327614-CDS-H-paniculata_contig290:7546..8163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig290 7547..8163 +
1622929884.278419-CDS-H-paniculata_contig290:9326..95871622929884.278419-CDS-H-paniculata_contig290:9326..9587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig290 9327..9587 +
1691481054.3389041-CDS-H-paniculata_contig290:9326..95871691481054.3389041-CDS-H-paniculata_contig290:9326..9587Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig290 9327..9587 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig290.7901.1

>prot_H-paniculata_contig290.7901.1 ID=prot_H-paniculata_contig290.7901.1|Name=mRNA_H-paniculata_contig290.7901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=415bp
MTAPHHRRPLKIATTAIMASLFVSTSAFVRPHFRAFSVGRLARCRQRHSS
RMRNPTQTGVEMLLGVETSAGLLGLGALGAMRAFTSSITPKRVRVVTDID
DTVKSSGNKRLLGIPLGGIDAQYSRGKFYPGVFQFSLELARYRVPSWQEP
LSVAVLTARAREFLFALEIGDSHEISMEFRKCGDRNNLKAWGRGPVLYGS
VKEWICGSRKSLRKARNFAKLVEDDGQGGHGRPGGAEGGYVFVGDTGEGD
ARAGELMSVQYPERLRAVFLHVVSDTMRQDTVGIPVDKEVNNVPVVYFRT
YVGAAVKAVQLGLMDKAGLENVIADARQALSAVPQTSSKWKDLNQDIAMA
LGAEVLLPPLTVETVMVSVEKSGTLTTKATDAGNGSAGTGYDRDRSRITS
ARRREGTLTGWRRD*
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mRNA from alignment at H-paniculata_contig290:5734..10291+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig290.7901.1 ID=mRNA_H-paniculata_contig290.7901.1|Name=mRNA_H-paniculata_contig290.7901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4558bp|location=Sequence derived from alignment at H-paniculata_contig290:5734..10291+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTGACATAGTTGTGGGCGATATATAAAGGTCGCCGTGAGGCGAGGGGCG GGGGGAATGACTGCGCCGCATCATCGGCGACCGCTGAAAATTGCTACGAC AGCAATCATGGCCAGTCTTTTTGTGTCCACGTCGGCATTTGTAAGGCCAC ATTTCCGAGCATTTTCGGTTGGCCGACTCGCGCGATGTCGACAGCGTCAC AGCAGCAGGATGCGAAATCCGACCCAAACCGGGGTAGAGATGTTGCTTGG CGTGGAAACAAGCGCCGGGCTGCTGGGACTTGGCGCGCTGGGCGCTATGA GAGCATTTACATCTAGCATTACTCCGAAGCGCGTGCGCGTTGTCACTGAT ATAGATGACACGGTGAAGTCAAGCGGCAACAAGAGACTTCTCGGCATACC CTTGGGCGGCATTGATGCACAATGTGAGGAAGGAGCCAAATGTGTACATA CGCCAGCAGAAATGTACGTGTAGTGCTGTCGCAATTTATGTTGACCATCA CATCATCCTGTAGCTTAGGTACATGACGTAGCGGTAGATTTCGTTCCTTT GGAAAATTGAACTTGGTCCTCGTAGGTTCGCAAGCATGTAGATGGGGCGT GTACACAGTACGTCTTGTAGAGCCTATGGCACCATAGAACTGGAATTTGG AGATGTTGTGCAAGTTCAGGTTCAATTGTTGAGGGGTGTATTGTCTGGAT ACAAGTGTAAAAGTGTGCAGAAAATCACGCCCATCACACTGAAGCTGTAT ATGTGGTGAGAGTCTCTTCCTCGTCCTTTCTATTTAGCGGTAAGGTCTGA TAGGGCTTGAACGCGTACAAGTATAGCGCTGGTGTCCTTGACAAGGCCCT TCAGATAATCTCTGCCCCCGAAAACAGTATAATTACTTAGTTTTTTTTCT GACAAACGCCGATGACATGATCGCGGAGATGGGGATCTTCTACAGACAAT ACAAGTACACAGGTCCTATAATTAGGTCAACACGACCCAGATCGACCCAG ATAGAGATTCTCAACAGACAGTACAAGTACATAGGCCCTGTAATTGGGTA CTTGGGCTTTGTGTTTGCTGCGATCGCTCTCGTGTCGACTGTCAATGTAG GCGTTTATTGCGCCCAAACTTCGCAACTTCCAAGTGAAATCACCACGCTT GTAAGGCTGATCGACCACCCAACAAGCCGAATAATGTGTCGGAAACAACA CGTTTTTCATTGACTTCAACTTATTTTTTTCGTGTACAATTCCATTTTTT TCCCTAAACTTCAGTTCAGCTTCTCAGACTCGTGGCTAGAGAACAAAAGC TCCTATTGCTGTACCATACTCCAAAACTGTGAGGCCGAAACCCCACCCTC TTCCCTCGTGAAACATGATCTCCCTCCCTCTTTGGTGGCGGGACTCTCAG ATGTTACTTTTGTTCCGAAACAGCATCCTCGGCCAGATGGGTTGGCTGCC TGCGAACACTCTTAAAACGTGCAATGTGCCATCTGTCAATTGGAGATGGG AGCAAAAAACCTTAGATACCCTTTTTCTTTTTATATGTCGCACATGACAC AGTCATGATTCTATTTGTTTAATATATGAAGTTGCAATATTGTAATCACC ATTTAACATGGGGATTGGGGGTCCAGCGCTCCGTTGTTTGTTATCCCTCA TCAAACCATGACACTCTCTTAAGCCAGCAGCGCCACCGCCCGTCCTTGCT CCTGTCTTCTCGGCTGGCAACCCCCCGAATCTGAAGCAACCCCCGGAATC CGAAACAACCCCTCTACCTCGCCCCACTTCTTTTTCTCCTTCGCTACTCT TCTTGCTGCTCAGACTCGCGGGGGAAGTTCTACCCTGGAGTGTTTCAGTT TTCCCTCGAGCTCGCACGATATCGGGTCCCTTCGTGGCAGGAACCCTTGT CGGTAGCAGTCCTCACGGCAAGAGCCAGAGAATTTCTCTTCGCGCTGGAA ATAGGAGACTCGCATGAAATATCCATGGAGTTTCGAAAGTGTGGGGATCG AAACAATCTCAAGGCCTGGGGCCGAGGACCTGTTTTATATGGGAGCGTCA AAGAGTGGATCTGCGGCAGCCGAAAAAGCCTGCGAAAAGCGCGAAATTTC GCGAAGCTGGTGGAGGATGACGGGCAGGGGGGACACGGCCGCCCCGGCGG GGCGGAGGGTGGTTATGTGTTTGTAGGGGATACGGGCGAGGGAGATGCTA GGGCGGGAGAACTGATGAGCGTCCAGTACCCCGAGCGTTTGCGAGCGGTG TTCTTGCACGTTGTGAGCGACACGATGAGGCAGGACACGGTGGGAATTCC TGTCGACAAGGAGGTAAACAACGTGCCCGTCGTGTACTTCCGTACCTACG TCGGGGCTGCCGTGAAGGCCGTCCAACTAGGGCTGATGGACAAGGCTGGG TTGGAGAACGTCATTGCTGATGCTCGGCAGGTAGGGAGACTGTCAATTGG TTCTAGTGGCACCGGTGAAGAGTGCTGAAATAGAAATGCTCGACGGGATT CACGGCGCGCAAGGCCCATGCCGAACCCAGCTAGAGAGACGGAACAGCTT CCAATGGATATTTTCGGCGTGATTTTCGCGAGTATATGTATAGATCTGGA ATTATTCGGGCAAATTTGTACAACAATGCCACGAGCGGCTGTGTGCGATT TTTTTTAGCGCCGGTCCTTATCTAATCTGTACCCCAAAACTGGGAAATGC GGCGCCTATGACATGACTAAAGGGATATAAGGTCGCTGCTTTTCATACAG ACAGTACGTACAGCACAGAGCAATAGTTGGCATGGTTGGTATGGTATTAC CATGCAGTAGTCGACTTTGCTGTCAGATGCCTTTTTGTTCCGAAGCAGCC CACGGCACAATAGGTTCGAAAGTAACGACAACAGGTACATTATTTCGTAT CTTTCTAGCTTAGTTTTTGCTATCTGATCTCATCTGCCTACTAATTTCGT GTGACCAGGCGCAGGAAAAGCGAGATTGCGTTGGTGTCTTCGTCTCTCTC TTGACAGCACATCATCAAGTGCCTGATGATTGGAATCTCACGGCTTGAAA ATCTCTTCTGTATCATCACACCAACCGCTTCCCCATGTCCTTGTTCGGAT ATTCACAGACAATCCACTGAACCAGTACGCCAGTAAGCCATTACGCGGAG TTGTGCACAGTTTCATGACTAACTCGTGTTAGGTAGTCGACCGGTAATCC TGGTAGTCGACGCATATGAAGCATTTTCAAAGATGCAAGGATTACAGTCG ATTGCTAACACCTAATTTACAGAATAGCAGCAGGGTTATCCCCCAAGCAT TCTTGGCACGACTATTCATTCGCCGACTCGTGTGGGATACCACCATTTGC TTGATCGGTTCGACCTATCGCGTCGCCCATATGGACCTTGTCGTCGGACT CACTACGGACTGTGAACGGCTAACGACTACGTTATGGGTGACGTATATCT TTGGAACGTTGGCTCATTAGGCCAGTGGCCGTTTCTCGTGTATCAGACAA ATAACTCAGGATACAAAATTCTGGCTCACTGGCTCACTAGCTCACTGGTC AAGTCGGCTTTGTATGTCGTGTTTTTGTGTCTGATTCGTGCAGGCATTGT CAGCAGTGCCTCAGACTTCCTCAAAGTGGAAAGACCTCAACCAAGATATT GCTATGGCGCTAGGTGCAGAGGTTCTCTTGCCGCCTTTGACAGTAGAAAC AGTAATGGTGTCAGTGGAAAAGTCTGGCACTCTTACAACCAAGGCAACGG ATGCTGGGAATGGCTCAGCCGGGACTGGTTACGATCGAGATAGGTCTCGA ATAACGTCAGCTAGAAGGCGTGAGGGGACTCTCACGGGATGGCGCAGAGA CTAGATCTCAGAAGTGTCCCGCTTCTCTTCTGCTTGTAACTGGCAGTGTG TTGTAATTTTATTGGTGTTTTTCAAACAGTATTTTGTTTTATCCGCCTGT TTTTAACCAGATCTCTGTTCTGCGTATCCAACCGTTGATGTCCTTGTAAC GCGGCGTCTTACGCATCTTGTAGCTCATCTGGACCTAGTAGCGGTGGAGT GTATGTACAGACACGCACCGTGTGGATTATTTCAGCAGTTTATTAGATGC AGGCCCGATGTAGTCGCAAAATAATTTGGTGTACAATATGCTACGGCTTT ACTTCATTTGTTTATAATACATTATGTTTTCGTCAATGCTACGTACCCGC AAATTTCCAACGCTCACGTAGATCCGAGTCTTGATGATCTGTATCATGAT GTCTTGGCCGGATTGTTTTGTTTCGTTTCGCATTCCGTCGTTGGTCTGAC GTAAAACAAGTCACGACTAAGCTGGGGCTTTCCCTGGCAGGCGTTGTCCC CCGTCGTCAGTTCGTACTTTGCCCCTCAAGACGCGTCCTGTGGTCTCGTG TCACCACATAGCTTCGTATTCAGGAAGTAATTGTGCGTTCACCACGGCAT CGTCATACACCACTCCTCACTGGCGTGAGATAAGGTCTACTTGTGTATAG AGTGCTGAATTTGGCGATCTGTGTAACAGAGATAAAACATCTCGGTACAG CTGTTCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig290:5734..10291+

>mRNA_H-paniculata_contig290.7901.1 ID=mRNA_H-paniculata_contig290.7901.1|Name=mRNA_H-paniculata_contig290.7901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2490bp|location=Sequence derived from alignment at H-paniculata_contig290:5734..10291+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACTGCGCCGCATCATCGGCGACCGCTGAAAATTGCTACGACAGCAAT
CATGGCCAGTCTTTTTGTGTCCACGTCGGCATTTGTAAGGCCACATTTCC
GAGCATTTTCGGTTGGCCGACTCGCGCGATGTCGACAGCGTCACAGCAGC
AGGATGCGAAATCCGACCCAAACCGGGGTAGAGATGTTGCTTGGCGTGGA
AACAAGCGCCGGGCTGCTGGGACTTGGCGCGCTGGGCGCTATGAGAGCAT
TTACATCTAGCATTACTCCGAAGCGCGTGCGCGTTGTCACTGATATAGAT
GACACGGTGAAGTCAAGCGGCAACAAGAGACTTCTCGGCATACCCTTGGG
CGGCATTGATGCACAATATGACTGCGCCGCATCATCGGCGACCGCTGAAA
ATTGCTACGACAGCAATCATGGCCAGTCTTTTTGTGTCCACGTCGGCATT
TGTAAGGCCACATTTCCGAGCATTTTCGGTTGGCCGACTCGCGCGATGTC
GACAGCGTCACAGCAGCAGGATGCGAAATCCGACCCAAACCGGGGTAGAG
ATGTTGCTTGGCGTGGAAACAAGCGCCGGGCTGCTGGGACTTGGCGCGCT
GGGCGCTATGAGAGCATTTACATCTAGCATTACTCCGAAGCGCGTGCGCG
TTGTCACTGATATAGATGACACGGTGAAGTCAAGCGGCAACAAGAGACTT
CTCGGCATACCCTTGGGCGGCATTGATGCACAATACTCGCGGGGGAAGTT
CTACCCTGGAGTGTTTCAGTTTTCCCTCGAGCTCGCACGATATCGGGTCC
CTTCGTGGCAGGAACCCTTGTCGGTAGCAGTCCTCACGGCAAGAGCCAGA
GAATTTCTCTTCGCGCTGGAAATAGGAGACTCGCATGAAATATCCATGGA
GTTTCGAAAGTGTGGGGATCGAAACAATCTCAAGGCCTGGGGCCGAGGAC
CTGTTTTATATGGGAGCGTCAAAGAGTGGATCTGCGGCAGCCGAAAAAGC
CTGCGAAAAGCGCGAAATTTCGCGAAGCTGGTGGAGGATGACGGGCAGGG
GGGACACGGCCGCCCCGGCGGGGCGGAGGGTGGTTATGTGTTTGTAGGGG
ATACGGGCGAGGGAGATGCTAGGGCGGGAGAACTGATGAGCGTCCAGTAC
CCCGAGCGTTTGCGAGCGGTGTTCTTGCACGTTGTGAGCGACACGATGAG
GCAGGACACGGTGGGAATTCCTGTCGACAAGGAGGTAAACAACGTGCCCG
TCGTGTACTTCCGTACCTACGTCGGGGCTGCCGTGAAGGCCGTCCAACTA
GGGCTGATGGACAAGGCTGGGTTGGAGAACGTCATTGCTGATGCTCGGCA
GACTCGCGGGGGAAGTTCTACCCTGGAGTGTTTCAGTTTTCCCTCGAGCT
CGCACGATATCGGGTCCCTTCGTGGCAGGAACCCTTGTCGGTAGCAGTCC
TCACGGCAAGAGCCAGAGAATTTCTCTTCGCGCTGGAAATAGGAGACTCG
CATGAAATATCCATGGAGTTTCGAAAGTGTGGGGATCGAAACAATCTCAA
GGCCTGGGGCCGAGGACCTGTTTTATATGGGAGCGTCAAAGAGTGGATCT
GCGGCAGCCGAAAAAGCCTGCGAAAAGCGCGAAATTTCGCGAAGCTGGTG
GAGGATGACGGGCAGGGGGGACACGGCCGCCCCGGCGGGGCGGAGGGTGG
TTATGTGTTTGTAGGGGATACGGGCGAGGGAGATGCTAGGGCGGGAGAAC
TGATGAGCGTCCAGTACCCCGAGCGTTTGCGAGCGGTGTTCTTGCACGTT
GTGAGCGACACGATGAGGCAGGACACGGTGGGAATTCCTGTCGACAAGGA
GGTAAACAACGTGCCCGTCGTGTACTTCCGTACCTACGTCGGGGCTGCCG
TGAAGGCCGTCCAACTAGGGCTGATGGACAAGGCTGGGTTGGAGAACGTC
ATTGCTGATGCTCGGCAGGCATTGTCAGCAGTGCCTCAGACTTCCTCAAA
GTGGAAAGACCTCAACCAAGATATTGCTATGGCGCTAGGTGCAGAGGTTC
TCTTGCCGCCTTTGACAGTAGAAACAGTAATGGTGTCAGTGGAAAAGTCT
GGCACTCTTACAACCAAGGCAACGGATGCTGGGAATGGCTCAGCCGGGAC
TGGTTACGATCGAGATAGGTCTCGAATAACGTCAGCTAGAAGGCGTGAGG
GGACTCTCACGGGATGGCGCAGAGACTAGGCATTGTCAGCAGTGCCTCAG
ACTTCCTCAAAGTGGAAAGACCTCAACCAAGATATTGCTATGGCGCTAGG
TGCAGAGGTTCTCTTGCCGCCTTTGACAGTAGAAACAGTAATGGTGTCAG
TGGAAAAGTCTGGCACTCTTACAACCAAGGCAACGGATGCTGGGAATGGC
TCAGCCGGGACTGGTTACGATCGAGATAGGTCTCGAATAACGTCAGCTAG
AAGGCGTGAGGGGACTCTCACGGGATGGCGCAGAGACTAG
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