mRNA_H-paniculata_contig2887.7870.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS) HSP 1 Score: 197 bits (502), Expect = 3.260e-55 Identity = 121/333 (36.34%), Postives = 186/333 (55.86%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRR-EKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVET-FIDANSAEDFEGRKSTTGYV 993
GN++RYK RLVAQG+SQ+ D+ E APV R+ + +AA D E+ + V AYLN +E++ +++ P + S + RLR++LY LKQSG WN D L IG + + C+Y EG T ++ V+VDDL+I E + E K + F +KDLG +++ IE++RDR NGTI++SQ YI VL R+G R V TL++ V L + D +P +G ++GSL+YA GT+ D++HAV + +P E + +R+ RYL+ +L + F G+++ T + DA+ A + + RKS +GY
Sbjct: 30 GNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVC---RLRKTLYGLKQSGCEWNWE-FDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNVI-LKKRTDDLIADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYT 355
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 201 bits (510), Expect = 1.830e-53 Identity = 121/333 (36.34%), Postives = 187/333 (56.16%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRR-EKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVET-FIDANSAEDFEGRKSTTGYV 993
GN++RYK RLVAQG+SQ+ D+ E APV R+ + R +AA D E+ + V AYLN +E++ +++ P + S + RLR++LY LKQSG+ WN D L IG + + C+Y EG T ++ V+VDDL+I E + E K + F +KDLG +++ IE++RDR NGTI++SQ YI VL R+G R V T ++ V L + D +P +G ++GSL+YA GT+ D++HAV + +P E + +R+ RYL+ +L + F G+++ T + DA+ A + + RKS +GY
Sbjct: 937 GNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVC---RLRKTLYGLKQSGREWNRE-FDRKLTSIGFSKLEADHCVYKRIREGRMT--IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTPLDPNVI-LKKRTDDLVADPAMVGGYQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYT 1262
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR) HSP 1 Score: 199 bits (505), Expect = 8.670e-53 Identity = 133/341 (39.00%), Postives = 191/341 (56.01%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIP--FLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGR-REKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGV--PTLVEGKVKNLAPESADKPPEPKPLGAVLG---MVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGK--SNGDVVETFIDANSAEDFEGRKSTTGYV 993
GN+ RYK+R+VA+GF+Q E D+ E+ APVA + + R + +LAA+HD EL+ + V AYLN + + ++ LP P DIP +L++SLY LKQ+G+ WN + D L +G R E CLY R EGG+ LV VYVDDL++A R +DE K ++ F+M+DLG S VL I++RRDR I +SQ YI VLKR G ++C+ V P + ++ P + D E + +VGSL+YA+ GT+ D+A+A +P R +R+ RYL DL + F G S + DA+ + D E KST+GYV
Sbjct: 1061 GNIERYKIRIVARGFTQREGVDYQEVFAPVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-LP----PDGVDIPKGHCWKLKKSLYGLKQAGRTWNK-TFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVLKRCGMEDCKPVFTPLSTQNRLTADDPINNDTLTEMTINNKTVSYATVVGSLMYAMMGTRPDIAYATGLLGRFSTNPKRCHWEAAKRVLRYLKGTRDLELQFDGNDVSMDMSFHGYSDADWSGDPETSKSTSGYV 1394
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: W8C3B0_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8C3B0_CERCA) HSP 1 Score: 192 bits (487), Expect = 7.320e-51 Identity = 118/334 (35.33%), Postives = 197/334 (58.98%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPF-LRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREKVDEF-KHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDAN-SAEDFEGRKSTTGYV 993
G + R+K RLVA+G SQ+ ++ + +PV R ST R +F+LAAE++ L + V+ A+LN ++ ++ P F SRD P + +L+++LY LKQ+G+ WN L + LV+IG ++ TEPC+Y + G+ L+AVYVDDL+IA ++ +F K IS+ F++ D G + L++EV R+ G IAI Q G+I+++L+++ ECR + T ++ K + +S K + + + ++GSL+Y T+ D+ H V + A + +P+ E L+ +R+ RYL +D + + G ++ + DA+ E FE RKS TGYV
Sbjct: 386 GEINRFKARLVAKGCSQIYGVNYTDTFSPVVRYSTIRIIFALAAEYELYLHHVDVSTAFLNGKVDDDIYMAQPEAFV--SRDHPNKVLKLKKALYGLKQAGRQWNVK-LHEILVKIGFKQCVTEPCVYTKHH--GDKINLLAVYVDDLLIASSHKQELQFIKQQISKYFQVVDKGPVELFLSMEVERNGEKGAIAIRQKGHIKQLLQQHNMLECRPIATPLDAKQQINCIDSECKRVDKQEYQS---LIGSLLYLALCTRPDIMHTVCKLAQQNSEPHSEHLAAAKRVLRYLCFTTDFALRYY--KTGSSIQCYADADWGGESFE-RKSYTGYV 708
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A1M2VT18_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Trametes TaxID=5324 RepID=A0A1M2VT18_TRAPU) HSP 1 Score: 189 bits (481), Expect = 1.320e-49 Identity = 122/343 (35.57%), Postives = 192/343 (55.98%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGR-REKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVL---------GMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKS-NGDV-VETFIDANSAEDFEGRKSTTGYV 993
G + RYK+R+VA+GF+Q D+ ++ APVA + + R + +LAA +D EL+ + V+ AYLN ++++ ++ P + + RL+ SLY LKQ+G+ WN +LD L +G R +E CLY R++ G+ LV VYVDDL++A R +DE K ++ +F+M+DLG S +L I +RRDRP I +SQ YI VL RYG +C+ T + VK SAD P + L ++ ++GS++YA+ GT+ D+A+ V +P R +R RYL D+ + F G GD+ + DA+ + D + +ST+G+V
Sbjct: 1041 GGIERYKIRIVARGFTQKPGIDYQDVFAPVANLESVRIILALAARYDLELDQMDVSAAYLNGELDEELYLMPPDGV---AIEPGHCWRLKRSLYGLKQAGRTWNK-TLDRKLTGLGFNRLDSETCLYVFRDDKGQLCFLV-VYVDDLLLAATSRAFMDEVKRKLTAQFKMRDLGEASYILGIAIRRDRPARAIYLSQRQYIDTVLDRYGMKDCKPQYTPMSASVK----PSADDPEDNTTLHSITIEGRSVSYASVIGSMMYAMMGTRPDIAYLVGVLGRYSANPKRCHWEMAKRGLRYLKATRDMELRFDGSDVAGDMDFHGYSDADWSGDRDTSRSTSGFV 1374
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR) HSP 1 Score: 188 bits (478), Expect = 3.250e-49 Identity = 114/332 (34.34%), Postives = 183/332 (55.12%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREK-VDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
GN+ R+K RLVA+GFSQ D+FE APVA+++T+RT+F+LAA +E+ G+ V AYL + ++ ++ P F + RL SLY LKQ+ + WN + FL+++G RS +PCLY + + ++VDDL+I G+ + + K ++ F MKDLG L L + + R NG+I+I Q GYIR++L+R+G + + V T + + + E+ + MVGSL+YA+ ++ D+A+A+ Q + +P +R+FRYL G+ + G + V + DA+ A D + RKS +GYV
Sbjct: 956 GNIVRFKARLVARGFSQAYGVDYFETYAPVAKLTTYRTIFALAALEQWEIHGMDVITAYLLGKLNEEIYMMQPEGFVRMGMKRNMVCRLLRSLYGLKQAARVWNQK-IHAFLIKLGFVRSNADPCLYIKKF------LYITIWVDDLLIVGKNGRDIANVKGQLAGEFEMKDLGKLEYFLGMRIMRSL-NGSISIDQNGYIRQILERFGMEASKPVSTPIATGTRLVIGETESN------IKQYQAMVGSLMYAMLCSRPDLAYAIQQLSQFNSNPTNAHFQAAKRVFRYLQGSQATGLVY-GSNITTPVLGYCDADYAADGD-RKSISGYV 1271
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI) HSP 1 Score: 187 bits (474), Expect = 1.120e-48 Identity = 120/339 (35.40%), Postives = 192/339 (56.64%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAV--LGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYVSS*TGG 1011
G++ ++K RLVAQG++Q+ DF E APVA++S+ RT+ +LAA +D+ELE + V AYLN ++++ +++ P P + + L+++LY LKQ+G+ W +L + + +G R ++ +++ R G++ +VA VD L IAG R+ V +FK IS RF M DLG++ +L IEV+RDR TIAISQ YI V R+ + V T ++ +S P + + V VGSL+YA+ GT+ D+A AV + M++P R +R+ RYL +L + + +G ++ F DA+ E R S +GYV + GG
Sbjct: 1022 GSITQFKARLVAQGYTQMPGVDFNETFAPVAKLSSIRTILALAARYDWELEQMEVKSAYLNGRLDEEIYMRQPPGSAPAGLE-HLVCCLKKTLYGLKQAGRGWYK-TLSNRMAEMGFTRCASDHAVWYKR--AGDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNVPYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYGTSDDG--IQGFSDADWGSSTEHRHSISGYVFTLDGG 1354
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A177VA33_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177VA33_9BASI) HSP 1 Score: 187 bits (474), Expect = 1.170e-48 Identity = 119/332 (35.84%), Postives = 184/332 (55.42%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREK-VDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
G AR+K RLVAQGFSQ D+ E APVAR++T R + +LA H ++ + V AYLN I + F+ P F S + LRR SLY LKQSG+ W + + +L GL + +EPC++ R+ G ++ +YVDD++IA + + +D + + S+RFRM D G LS+VL ++V + GT ISQ YI +++R+G DE V + + ++ L D + ++G ++A GT+ D+A+AV + A M +P E + R+ RYL S +G+ F +SN + E F DA+ A+D + R+S +GY
Sbjct: 1361 GMAARWKARLVAQGFSQKAGIDYDETFAPVARLTTIRILVALALRHKMKIWSMDVVTAYLNGTITEDIFMMQPPNFDDGSGRVCKLRR---SLYGLKQSGREWFS-VVATWLKAQGLWPTQSEPCVFTKRDRYGNA-IIIVLYVDDVLIACQNQSTIDSIRDSFSQRFRMTDNGPLSQVLGLKVDINHDAGTATISQQAYIDSIIRRFGMDEANAVDSPMTAALQGLG-RRTDGQATAAEICVFASLIGCEMWAAQGTRPDIAYAVSRLARFMANPRPEHIVGAYRLLRYLKGTSGIGLVFTDESNVQI-EGFCDADHAKDHDNRRSVSGYA 1685
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: A0A177TIS2_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177TIS2_9BASI) HSP 1 Score: 186 bits (473), Expect = 1.240e-48 Identity = 119/332 (35.84%), Postives = 184/332 (55.42%), Query Frame = 1
Query: 1 GNVARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGRREK-VDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVKNLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
G AR+K RLVAQGFSQ D+ E APVAR++T R + +LA H ++ + V AYLN I + F+ P F S + LRR SLY LKQSG+ W + + +L GL + +EPC++ R+ G ++ +YVDD++IA + + +D + + S+RFRM D G LS+VL ++V + GT ISQ YI +++R+G DE V + + ++ L D + ++G ++A GT+ D+A+AV + A M +P E + R+ RYL S +G+ F +SN + E F DA+ A+D + R+S +GY
Sbjct: 576 GMAARWKARLVAQGFSQKAGIDYDETFAPVARLTTIRILVALALRHKMKIWSMDVVTAYLNGTITEDIFMMQPPNFDDGSGRVCKLRR---SLYGLKQSGREWFS-VVATWLKAQGLWPTQSEPCVFTKRDRYGNA-IIIVLYVDDVLIACQNQSTIDSIRDSFSQRFRMTDNGPLSQVLGLKVDINHGAGTATISQQAYIDSIIRRFGMDEANAVDSPMTAALQGLG-RRTDGQATAAEICVFASLIGCEMWAAQGTRPDIAYAVSRLARFMANPRPEHIVGAYRLLRYLKGTSGIGLVFTDESNVQI-EGFCDADHAKDHDNRRSVSGYA 900
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Match: Q6L4X8_ORYSJ (Putative polyprotein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q6L4X8_ORYSJ) HSP 1 Score: 186 bits (472), Expect = 1.930e-48 Identity = 115/333 (34.53%), Postives = 195/333 (58.56%), Query Frame = 1
Query: 10 ARYKVRLVAQGFSQVEDEDFFEISAPVARMSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFF-PFSRDIPFLRRLRESLYCLKQSGQNWNNNSLDDFLVRIGLQRSTTEPCLYFSRNEGGETDTLVAVYVDDLVIAGR-REKVDEFKHNISRRFRMKDLGSLSRVLAIEVRRDRPNGTIAISQGGYIREVLKRYGFDECRGVPTLVEGKVK---NLAPESADKPPEPKPLGAVLGMVGSLVYALTGTKYDVAHAVHQAACRMEDPYREDLSTCRRIFRYLSIVSDLGITFCGKSNGDVVETFIDANSAEDFEGRKSTTGYV 993
ARYK RLVA+G+SQ+ DF ++ +PV + S+ RT+ S+ A HD+ELE + V A+L+ +E+ +++ P F P ++ + RL++SLY LKQS + W D F+ +RS + C+Y +G L+ YVDD++IA + + ++++ K +S F MKDLG+ ++L +E+ R+R +G + +SQ GYI +VL+R+ + + V T + + +L P+S D E L +VGSL+YA+ ++ D++HA+ + M +P +E + IF+YL S + F G+S +V ++D++ A D + R+S TGYV
Sbjct: 757 ARYKARLVAKGYSQIPGIDFNDVFSPVLKHSSIRTLLSIVAVHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVY--RLKKSLYGLKQSPRQWYKR-FDSFMFSQKFRRSNYDSCVYLKVVDGSSIYLLL--YVDDMLIAAKDKSEIEKLKAQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKGYIEKVLRRFNMHDAKPVSTPLAAHFRLSSDLCPQS-DYDIEYMSRVPYLSVVGSLMYAMVCSRLDLSHALSVVSRYMANPGKEHWKVVQWIFKYLRGTSSACLQF-GRSRDGLVG-YVDSDFAGDLDRRRSLTGYV 1081 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2887.7870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2887.7870.1 >prot_H-paniculata_contig2887.7870.1 ID=prot_H-paniculata_contig2887.7870.1|Name=mRNA_H-paniculata_contig2887.7870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=302bp MSTFRTVFSLAAEHDFELEGIHVNVAYLNAPIEQKPFVKLPSEFFPFSRDback to top mRNA from alignment at H-paniculata_contig2887:2081..3282- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2887.7870.1 ID=mRNA_H-paniculata_contig2887.7870.1|Name=mRNA_H-paniculata_contig2887.7870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1202bp|location=Sequence derived from alignment at H-paniculata_contig2887:2081..3282- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2887:2081..3282- >mRNA_H-paniculata_contig2887.7870.1 ID=mRNA_H-paniculata_contig2887.7870.1|Name=mRNA_H-paniculata_contig2887.7870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1812bp|location=Sequence derived from alignment at H-paniculata_contig2887:2081..3282- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |