mRNA_H-paniculata_contig2883.7859.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: A0A6H5K8Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z9_9PHAE) HSP 1 Score: 214 bits (544), Expect = 8.670e-65 Identity = 109/156 (69.87%), Postives = 121/156 (77.56%), Query Frame = 1
Query: 1 KVISASPRYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFGTMDPSVIYGDADPMSPPFETPSADLREH---DDFSSNRPPWWLTASVDKDGAVLDWRRAPA 459
KVI+ SPRY+RVEF+S A+ A+VDDAEFYFTPGDALVQFR ARR GPTDFG NRRRMD IR AL FES+ VLRNRKRALFFGESP+DSFGPSFG DPSVIYGDADPMSPPFETPS LRE ++RP WW + G DWR+ P+
Sbjct: 178 KVIATSPRYLRVEFESPNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADPSVIYGDADPMSPPFETPSDALRERYGEGGGGADRPAWWGKPLAEA-GGFADWRQMPS 332
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: D8LJJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ3_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.400e-42 Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 1
Query: 1 KVISASPRYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFG 285
KVI++SPRY+RVEF++ A+ A+VDDAEFYFTPGDALVQFR ARR GPTDFG NRRRMD IR AL FES+ VLRNRKRALFFGESP+DSFGPSFG
Sbjct: 178 KVIASSPRYLRVEFEAVNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFG 272
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: R1BF77_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BF77_EMIHU) HSP 1 Score: 123 bits (308), Expect = 1.160e-30 Identity = 67/140 (47.86%), Postives = 84/140 (60.00%), Query Frame = 1
Query: 1 KVISASPRYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFGTMDP---------------SVIYGDADPMSPPFETPSADLREHDD 375
KV+ RY+R EF SR L AVDDAEF+FTP D LVQFRAARR DFG NR+R++ R+AL +E V VLRNR+RAL ESP DSFGP+ D +YGD DP++ P+ P+ +R+ D
Sbjct: 82 KVVEQDERYLRAEFASRGPLGDAVDDAEFFFTPDDVLVQFRAARRGDAPDFGANRKRLERARIALGWEKVEVLRNRRRALVVVESPFDSFGPATYERDELGFTNRDLVPAEANQKELYGDLDPLAAPWRKPTPSMRDAKD 221
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: A0A6V1P1K7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1K7_HETAK) HSP 1 Score: 119 bits (298), Expect = 1.090e-28 Identity = 68/129 (52.71%), Postives = 87/129 (67.44%), Query Frame = 1
Query: 1 KVISASPRYIRVEF-DSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSF------GTMDPSVIY-GDADPMSPPFETPSADLR 363
K+I + Y+RVEF D RT +VDDAE+YFTP D+++QFRAARR TDF NRRRM+ +R+AL +E + VLRNR+RAL F ES LDSFGP+ MD +Y GD DP +P +E PS +R
Sbjct: 146 KIIKKTEDYLRVEFHDMRTG---SVDDAEWYFTPNDSIIQFRAARRDAKTDFAANRRRMENLRIALGYEKIPVLRNRQRALVFFESLLDSFGPATIRDMTPEEMDAMELYRGDLDPRAPAWEAPSKQMR 271
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: A0A4D9CVY8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVY8_9STRA) HSP 1 Score: 114 bits (285), Expect = 2.500e-28 Identity = 60/121 (49.59%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 1 KVISASPRYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFGTMDP-----SVIYGDADPMSPPFETP 348
+ ISA RY+R E +DD EFYFTP D+++QFR+ARR D G N++RM+ IR+AL FE + VLRNR+RALFF ESPLD +GPS+ P YGD+DP++P +E P
Sbjct: 15 ETISAEDRYLRFEIKED----GNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAP 131
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: A0A7S2MSC2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MSC2_9EUKA) HSP 1 Score: 116 bits (290), Expect = 7.020e-28 Identity = 62/128 (48.44%), Postives = 85/128 (66.41%), Query Frame = 1
Query: 22 RYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPS-FGTMDPSVIYGDADPMSPPFETPSAD----LREHDDFSSNR 390
RY+R EF+ + A+DD +F+FTP D LVQF+A RR G +DFG NR+R++ +R+AL +E V VLRNR+RAL ESPLDSFGP+ +G I+ D DPM+ F+ P+ +RE DD +R
Sbjct: 128 RYLRAEFEDSGFIGVAIDDCQFFFTPNDTLVQFKAVRRGGASDFGVNRKRLEKLRIALGWEKVPVLRNRRRALVVVESPLDSFGPALYGD-----IFEDKDPMAGAFKPPTGAERLWMRESDDRVRSR 250
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: A0A835YWY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY1_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.460e-27 Identity = 67/128 (52.34%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 1 KVISASPRYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPS-FGT-----MDPSVIYGDADPMSPPFETPSADLRE 366
K+++ S RY+R E S +A VDD E Y TP D VQFRA RR G TD G NR+RM+ +R+AL FE + VLRNR RA FGES LDSFGPS F M P ++ D DP +P FETPS L++
Sbjct: 97 KIVAESERYLRAEVASLGGIA--VDDVELYLTPNDYTVQFRANRRDGVTDLGQNRKRMERMRIALGFEKIPVLRNRTRAFIFGESFLDSFGPSGFNNEVPEEMAPGAMW-DRDPKAPVFETPSPSLKK 221
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: W7TBJ3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBJ3_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.310e-26 Identity = 60/121 (49.59%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 1 KVISASPRYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFGTMDP-----SVIYGDADPMSPPFETP 348
+ ISA RY+R E +DD EFYFTP D+++QFR+ARR D G N++RM+ IR+AL FE + VLRNR+RALFF ESPLD +GPS+ P YGD+DP++P +E P
Sbjct: 179 ETISAEDRYLRFEIKED----GNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAP 295
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: A0A7S0EPF0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPF0_9EUKA) HSP 1 Score: 110 bits (275), Expect = 9.550e-26 Identity = 61/136 (44.85%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 4 VISASPRYIRVEFDSRTALAAAVDDAEFYFTPGDALVQFRAARRAGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFGTMDP---------------SVIYGDADPMSPPFETPSADLRE 366
VI RY+R EF S+ L +VDD E+YFTP D LVQFRA RR DFG N++R++ +R+ L +E V +LRNR+RAL ESP DSFGP D IY D DPM+ F PS + E
Sbjct: 91 VIEKDGRYLRAEFASKGPLGESVDDVEWYFTPNDVLVQFRAERRGAGPDFGANKKRLEKMRIGLGWERVEILRNRRRALVVVESPFDSFGPGTYEADELGFSNREMVPAEANQKEIYRDVDPMAAAFRKPSGSMLE 226
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Match: A0A7S0IQF0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IQF0_9EUKA) HSP 1 Score: 100 bits (249), Expect = 3.170e-22 Identity = 63/159 (39.62%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 4 VISASPRYIRVEFDSRTALAAAV-DDAEFYFTPGDALVQFRAARR-AGPTDFGTNRRRMDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFGTMDP---------------SVIYGDADPMSPPFETPSADLREH--DDFSSNRPPWWLTASVDK 423
++ A RY+R F SR + V DD EF+FTP D LVQFRA R+ A +D G NR+R++ R+AL +E V VLRNR+RAL ESP DSFGP+ D + +YG+ DP++ + P A +RE +D WL + D+
Sbjct: 52 LVQADERYLRARFASRGLFGSPVIDDVEFFFTPNDTLVQFRAVRQGAMQSDLGENRKRLEKARLALGWEQVPVLRNRRRALVVVESPWDSFGPAMSERDELGFSPRELVPAETPRAELYGELDPLTARWAPPPAAMREGRANDVGKQLQGLWLREADDR 210 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2883.7859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2883.7859.1 >prot_H-paniculata_contig2883.7859.1 ID=prot_H-paniculata_contig2883.7859.1|Name=mRNA_H-paniculata_contig2883.7859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp MDAIRVALNFESVAVLRNRKRALFFGESPLDSFGPSFGTMDPSVIYGDADback to top mRNA from alignment at H-paniculata_contig2883:17638..19571- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2883.7859.1 ID=mRNA_H-paniculata_contig2883.7859.1|Name=mRNA_H-paniculata_contig2883.7859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1934bp|location=Sequence derived from alignment at H-paniculata_contig2883:17638..19571- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2883:17638..19571- >mRNA_H-paniculata_contig2883.7859.1 ID=mRNA_H-paniculata_contig2883.7859.1|Name=mRNA_H-paniculata_contig2883.7859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig2883:17638..19571- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |