mRNA_H-paniculata_contig288.7849.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig288.7849.1
Unique NamemRNA_H-paniculata_contig288.7849.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: D7FMJ8_ECTSI (Mannitol 1-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMJ8_ECTSI)

HSP 1 Score: 895 bits (2313), Expect = 2.270e-314
Identity = 433/524 (82.63%), Postives = 477/524 (91.03%), Query Frame = 2
Query:  380 VAVNLDKPFLATLEAEAITHYRRTYHNFRAGKAHGAKGETDQFHVEPDVPAVDEELLREETFFSLPGSITKVMDAISAYRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARFMPVGQRANLIRTTKEAEAKDPPQTPLTRLHVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSEDQLPEDLYAPNLKLFVCSINPSLQRKVVNAADTLTTSLGPVMHRVVMPHFDVDKPEGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVGSAPASQP 1951
            + ++L  PFL  LEAEAITHYRRTYHNFR GK+ GAKGET+QFHVEPD+PAVDEELL +ETFFSL GSITKVMDAI+ YRISYSRFRQG+HRGAKGE+SAVT  M+AAHA+FMPVGQRANLIRTT EA+A     TP+T+LHVHFGCGRLGMGLLSPAMA++GRPVILIDGPFGDYE LVKEGHKTV+FYVNGEPTLT V+LITSE  LP+DLY P LKLF+CS +P+LQRK V+A DTLTTSLGPVMH+VVMPHFDVDK  G+RTYIYGCENDHGMVEELGEKL+GKAEVVTCMVDRICTGR VTGN I+VSAEPH+GEVVILQPPV APLPAFAGDNV VPMTYGEANYFCRRKITMVNGMHTTLAFITLCREE GD PG+HKLLTC DA +++Q SIWHWAVARLLL+LWEHD EIIRHAH L+TDDEVC+ LI YARSSLKRFDTVEDTTGRVL GGVANRWNTRLKVALNYLDSQPRPG++E+RLLKM+ V+Y+DV +SVK LVEDSHRFVG+AP SQP
Sbjct:    2 IDISLAPPFLPALEAEAITHYRRTYHNFRLGKSQGAKGETNQFHVEPDLPAVDEELLEQETFFSLSGSITKVMDAITGYRISYSRFRQGFHRGAKGEISAVTHFMTAAHAKFMPVGQRANLIRTTAEAKAAGDIDTPVTKLHVHFGCGRLGMGLLSPAMAKSGRPVILIDGPFGDYEALVKEGHKTVNFYVNGEPTLTDVTLITSEADLPDDLYKPGLKLFICSTDPALQRKAVDACDTLTTSLGPVMHKVVMPHFDVDKSPGDRTYIYGCENDHGMVEELGEKLEGKAEVVTCMVDRICTGREVTGNDIKVSAEPHLGEVVILQPPVAAPLPAFAGDNVMVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREESGDHPGDHKLLTCKDAPQDVQDSIWHWAVARLLLILWEHDHEIIRHAHGLTTDDEVCEKLIAYARSSLKRFDTVEDTTGRVLAGGVANRWNTRLKVALNYLDSQPRPGQMEARLLKMSGVKYTDVVSSVKTLVEDSHRFVGTAPVSQP 525          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: A0A2Z4C3U8_SACJA (Mannitol-1-phosphate dehydrogenase 1 n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4C3U8_SACJA)

HSP 1 Score: 868 bits (2244), Expect = 2.660e-303
Identity = 421/510 (82.55%), Postives = 463/510 (90.78%), Query Frame = 2
Query:  422 AEAITHYRRTYHNFRAGKAHGAKGETDQFHVEPDVPAVDEELLREETFFSLPGSITKVMDAISAYRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARFMPVGQRANLIRTTKEAEAKDPPQTPLTRLHVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSEDQLPEDLYAPNLKLFVCSINPSLQRKVVNAADTLTTSLGPVMHRVVMPHFDVDKPEGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVGSAPASQP 1951
            +++ITHYRRTYHNFR GK+ GAKGETDQFHVEPD+PA+DE LL EETFFS+ G +TKVMDAI+AYRISYSRFRQG+HRGAKGE+SAVT  M+AAHA+FMPVGQRANLIRTT EA+AK   +TPLTRLHVHFGCGRLGMGLLSPAMA++ RPVILIDGPFGDYE LVK+GHKTV+FYVN EPTLT V+L+TSE  LPEDL+AP LKLFVCS +  LQR+VVNA DTLTTSLGPVMH+V+ PHFD +K   +RTYIYGCENDHGMVEELGEKL+GKA VVTCMVDRICTGR V GN I+VSAEPHVGEVVILQPP MAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAF+TLC+EE GD PG+HKLLTC DA  +IQA IWHWAVARLLL+LWEHD EIIRHAH L+TDDEVC+ LI YARSSLKRFDTVEDTTGRVL GGVANRWNTRLKVALNYLDSQPRPGK+E+RLL MA V+YSDV ASVK+LVEDSHRFVG+APASQP
Sbjct:   56 SQSITHYRRTYHNFRLGKSQGAKGETDQFHVEPDMPAMDEGLLEEETFFSIAGPMTKVMDAITAYRISYSRFRQGFHRGAKGEISAVTSFMTAAHAKFMPVGQRANLIRTTNEAKAKGEIETPLTRLHVHFGCGRLGMGLLSPAMAQSDRPVILIDGPFGDYEKLVKDGHKTVNFYVNDEPTLTDVTLVTSEADLPEDLHAPGLKLFVCSTDAKLQRRVVNACDTLTTSLGPVMHKVITPHFDEEKSPEDRTYIYGCENDHGMVEELGEKLEGKAFVVTCMVDRICTGREVIGNDIKVSAEPHVGEVVILQPPPMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFLTLCKEETGDHPGDHKLLTCKDAPADIQAKIWHWAVARLLLILWEHDQEIIRHAHGLTTDDEVCETLIAYARSSLKRFDTVEDTTGRVLAGGVANRWNTRLKVALNYLDSQPRPGKMEARLLSMAGVKYSDVIASVKDLVEDSHRFVGTAPASQP 565          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: A0A836CC36_9STRA (Mannitol 1-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC36_9STRA)

HSP 1 Score: 534 bits (1376), Expect = 7.400e-174
Identity = 282/521 (54.13%), Postives = 369/521 (70.83%), Query Frame = 2
Query:  395 DKPFLATLEAEAITHYRRTYHNFRAGKAHGAKGETDQFHVEPDVP--AVDEELLREETFFSLPGSITKVMDAISAYRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARFMPVGQRANLI-RTTKEAEAKDPPQTPLTRLHVHFGCGRLGMGLLSPAMAEA---GRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSEDQLPEDLYAPNLKLFVCSINPSLQRKVVNAADTLTTSLGPVMHRVVMPHFDVDKPEGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVGSAP 1939
            DK     +  + +  +R+TY  FR G+A GAKGE DQF +E  +    ++ E L  ETF ++  +  +V +A++ YR+SY+RFRQG  +GAKGEVSAVT++M+  HAR MPV QRA L+ R  +EA        P T+ H+HFG GRLG+GLLSPA+A+A   G P  L+D PFGDY+ LVK GHKTV F+VNGEPT+  V LIT E+QLPE+L  P   LF+C+ +  L  KV+  A T++TSLGPVM +VV P+F+  KP  +  +IY CENDHGMVE+LGE L+GKA VVTCMVDRICTGRTV  +K+  ++EPH+GE+VIL PP+ APLPAF G NV  P +   A+YFCRRKI +VNGMHTTLAF++L +E KGD   +  LL    AS+E Q  I  + V RLLLVL+EHD  +I+HAH++ TD+EV +VL+DY  S+LKR++T++D T RVLGGGVANRW+TRL     +LD+ P+ G I  RLL+MA+V+   V ASV  LV+DS +FVG  P
Sbjct:   13 DKKLGKAINNDRVHAFRQTYRYFRTGEAKGAKGEVDQFRIETGLENFPLNREALESETFATVESANAEVYNAVTNYRLSYARFRQGGSQGAKGEVSAVTRIMTMEHARSMPVAQRAKLLKREQREAH-------PDTKFHLHFGGGRLGLGLLSPAIAKAHDTGIPFALVDAPFGDYDDLVKRGHKTVSFFVNGEPTIQNVLLITKEEQLPENLLDPKTALFLCTTDTKLVNKVLAIATTVSTSLGPVMPKVVCPYFE--KPTDK--FIYCCENDHGMVEKLGETLEGKATVVTCMVDRICTGRTVEEDKVYTTSEPHLGEIVILNPPLGAPLPAFKGPNVMAPDSQATADYFCRRKIGLVNGMHTTLAFMSLLQECKGDTAEDVDLLAPEKASEEQQQMIRDFMVVRLLLVLYEHDTSVIKHAHNVKTDEEVARVLLDYGESTLKRYNTIQDKTSRVLGGGVANRWSTRLCNVKQFLDAHPQLGGISKRLLRMANVDEKHVRASVDKLVKDSEKFVGQKP 522          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: D8LI09_ECTSI (Mannitol 1-phosphate dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI09_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 2.990e-118
Identity = 225/546 (41.21%), Postives = 328/546 (60.07%), Query Frame = 2
Query:  380 VAVNLDKPFLATLEAEAITHYRRTYHNFRAGKAHGAKGETDQF---HVEPD--VPAVDEELLREETFFSLPGSIT------KVMDAISAYRISYSRFRQGYHRGAKGEVSAV----TQLMSAAHARF-MPVGQRANLIRTTKEAEAKDPPQTPLTRLHVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSE-----DQLPEDLYAPNLKLFVCSINPSLQRKVVNAADTLTTSLGPVMHRVVMPHFDVDKP--EGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGN----HKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQP--RPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVG 1930
            V+ ++    L+ L+ EA+  YR +Y  FR G + G++GE  +    HV PD  VP VD +         +PG         ++ DA+S YR+ Y R R G  RGAKGE++A+    T L     +   +PVGQ + L    K A         LT  HVH G GRLG+GL+ PA+  +G+P  ++  P   +  +  +    V   VNGEPT+  + ++ +        LP        ++F C+      + +   A T + SLGP M  VV+P     +P  +GER  +Y CENDH  V +L E L+G+ +VV+CMVDRICT RT+T + IE+  EP  GE+V++ PP  APLP F GD+V++P    EA YFCRRKI +VNGMHTTLAFITLC+ E G + G+    H L+T A A+++  A +W WAVAR++ V+WEH+ +II+ AH+++TD+E+C+ L+ YA+++L RF  VED  GRVLGGGVANR+  RL +  ++L+++P  R G + ++LLK+A V+ SD+  +V++LVE S RFVG
Sbjct:    5 VSRDIGPAVLSQLDNEAVRTYRMSYRRFRKGDSRGSRGEDPEAPADHVVPDELVPEVDGD-------HGVPGLSAAEIFNAEMFDALSRYRMDYRRHRMGAARGAKGEITALAMGPTSLTGNKRSSMKLPVGQLSALAAFRKAA--LHAAVARLTTFHVHIGAGRLGLGLVIPAIHASGKPYAIVQRPSRSWAAVTDKEGTEVGLKVNGEPTIEKMDVLKNGMVGGVAALPGGGLGEESRVFACTDEAESLKALAERATTFSISLGPSMSDVVLPLLSCIEPKADGERPALYACENDHDAVHKLQEALEGRVDVVSCMVDRICTERTITADWIEMGTEPSSGEIVVIAPPQGAPLPPFKGDHVQIPRIPAEAEYFCRRKILLVNGMHTTLAFITLCKLESGVLQGDGWKEHILVTPATATEQENALVWRWAVARVMYVMWEHEPDIIKAAHNINTDEELCRTLLRYAKTTLGRFSGVEDKAGRVLGGGVANRFEGRLNMIKSFLENEPPMRTG-LRAKLLKLAGVKESDMREAVRSLVEQSSRFVG 540          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: A0A835YRM5_9STRA (Mannitol 1-phosphate dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM5_9STRA)

HSP 1 Score: 371 bits (953), Expect = 4.880e-112
Identity = 209/522 (40.04%), Postives = 295/522 (56.51%), Query Frame = 2
Query:  392 LDKPFLATLEAEAITHYRRTYHNFRAGKAHGAKGETDQ-FHVEPDVPAVDEELLREETFFSLPGSITKVMDAISAYRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARFMPVGQRANLIRTTKEAEAKDPPQTPLTRLHVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSEDQLPEDLYAPNLKLFVCSINPSLQRKVVNAADTLTTSLGPVMHRVVMP---HFDVDKPEGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGN----HKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQPR-PGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVG 1930
            L   FL  LE E +  YR +Y  FR+G   G+KGE     H  P++   D+     ET     G   ++  AI+AYR+ Y  +R+G+  GAKGE++ ++  MS+  A  +PV Q   L R  +E  A  P  +   + HVH G GRLG+GL+ PA++    P  ++  P G ++ L   G       VNG+ T+   +L+ +  + PE      L +F  + +P +   ++  A + +TSLGP +   V+P       D    +R  +Y CENDH  V  L ++L+G+ +VV CMVDRICT RT++   + +  EPH GEVV++ PP  APLP   GDN++ P    EA Y+C+RK+ MVNGMHT LAF+TLC+ E G + G+    H L T A A +  +  +W WAVAR L + WEH+ E+I  AH      EVC  L+ YAR++L RF TV+D  GRVLGGGVANRWN RLKV  ++L  +P   G +   LLK A V   ++   V  LV +S RFVG
Sbjct:   10 LPPSFLPELENEPVHDYRLSYRRFRSGHHEGSKGEVAAPLHRSPELDHEDDI----ETMVESDGRFQQIHAAINAYRMHYRMYRRGHPEGAKGEITDLSVKMSSRVAASLPVAQLQRLARHKREG-ALAPNAS---KYHVHLGAGRLGLGLVIPALSRGAAPFAILQRPSGAWKALTASGADATRIRVNGDETVIEFALLVNGSR-PEAALGGALPVFAVTDDPVILAALIARATSYSTSLGPGLADTVLPLLGGLPADAAAEQRPALYACENDHAAVHSLAQELEGRVDVVDCMVDRICTERTISAEFVGIGTEPHPGEVVVITPPKTAPLPPLGGDNIRWPKIAAEAEYWCQRKLLMVNGMHTCLAFMTLCKHEPGGLSGDGWKEHTLNTMATADEAERRRMWVWAVARCLFIAWEHEPEVIASAHGAEGHAEVCAALLSYARATLGRFSTVQDKVGRVLGGGVANRWNGRLKVIADFLAGEPAFRGGLRGELLKQAGVGEEELRREVNALVAESQRFVG 522          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: A0A0G4F4M9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F4M9_VITBC)

HSP 1 Score: 365 bits (936), Expect = 7.460e-109
Identity = 214/564 (37.94%), Postives = 320/564 (56.74%), Query Frame = 2
Query:  392 LDKPFLATLEAEAITHYRRTYHNFRAGKAHGAKGETDQ-----------------FHVEPD--------VPAVDEELLRE-----ETFFSLPGSITKVMDAISAYRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARFMPVGQ----RANLIRTTKEAEAKDPPQTPL-TRLHVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSEDQLPEDLYAPN-------LKLFVCSINPSLQRKVVNAADTLTTSLGPVM----HRVVMPHFDVDKPEGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVM-APLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDS----QPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVG 1930
            L++PF   L  ++I H+R+ Y +FR G  HGAKGE D+                 F VE           P+  + L        E   S   ++ K++++I+ +RI Y RFR+G  +GA+  +  +T+ +   H R +PV Q    +  L    K +E +  P+  L T  HVHFG G+LG+GL+S A+A +G+P  ++D P   ++ L++    T D  VNG   +T + ++   D LP    AP        L+LFVCS + +    ++ AA +++TS+GP +     R+     D  K       ++GCENDH  V+ L   L G+ +VV CMVDRICTGR +T  +I ++ EP  G +V++ PP   A  PAF G+   +P+   EA+YF  RKIT+VNGMHTTLAF+TLC  +K D P +H+LLT A    + Q  +W WAVAR+L++LW+HD  II+HAH ++ D E+ ++L+ YAR +L RF T+ DTTGR+L GGV NR+ TRL+    +L S    +   GKI   +LK A++    +  +V+ LVED++RF G
Sbjct:   24 LERPFSQKLNRDSIWHFRQNYRSFRCGMPHGAKGEADEAFERAVSNPPDTLPDAVFEVEASPKHYNGDVTPSTGKRLSSAYKEEWEHVESNDTNLAKIINSIAEFRIGYRRFRKGEAKGAQRHMGDITRDIKREHLRVLPVAQLKQLQLQLSEMRKPSEERIMPKGFLPTAFHVHFGAGKLGLGLISTALAGSGQPFAIVDPPLDAWKELLESKSPTTDVIVNGTK-ITQLQVLRPGDPLPSLPIAPGQHGGSTPLRLFVCSSDDATLATLIKAATSMSTSVGPALPMIGDRISGVLSDPPKDHHRLPTLFGCENDHKAVDRLANSLAGRVDVVCCMVDRICTGRELTPTEIRITTEPDPGAIVVMTPPEPPAYAPAFGGECFTLPLVEAEAHYFANRKITIVNGMHTTLAFMTLCIMQKDDEPRSHELLTTATLPDDKQREVWAWAVARVLMILWQHDTHIIKHAHCMNDDIELARLLLGYARRTLNRFATISDTTGRILSGGVTNRYQTRLQPVDKFLMSHEVGEVPLGKI---VLKEAELTEGFLLRAVRRLVEDAYRFTG 583          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: B7ZGN5_9PHAE (Mannitol-1-phosphate dehydrogenase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN5_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 6.930e-108
Identity = 166/195 (85.13%), Postives = 180/195 (92.31%), Query Frame = 2
Query: 1367 APLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVGSAPASQP 1951
            APLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAF+TLC+EE GD PG+HKLLTC DA  + QA IWHWAVARLLL+LWEHD EIIRHAH L+TDDEVC+ LI YARSSLKRFDTVEDTTGRVL GGVANRWNTRLKVALNYLDSQPRPGK+E+RLL +A V+YSDV ASVK+LVEDSHRFVG+APA+QP
Sbjct:    4 APLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFLTLCKEESGDHPGDHKLLTCKDAPADNQAKIWHWAVARLLLILWEHDQEIIRHAHALTTDDEVCETLIAYARSSLKRFDTVEDTTGRVLAGGVANRWNTRLKVALNYLDSQPRPGKMEARLLTLAGVKYSDVIASVKDLVEDSHRFVGTAPANQP 198          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: A0A0G4I719_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I719_9ALVE)

HSP 1 Score: 329 bits (844), Expect = 1.300e-95
Identity = 207/585 (35.38%), Postives = 305/585 (52.14%), Query Frame = 2
Query:  389 NLDKPFLATLEAEAITHYRRTYHNFRA------------------GKAHGAKGETDQFHVEPDVPAVDEELLREETFFSLPGSITKVMDAISAYRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARFMPVGQRANLIRTTKEAEAKDPPQTPLTR-LHVHFGCGRLGMGLLSPAMA-----EAGRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSEDQLPEDLY---------APNLKLFVCSINPSLQRKVVN----AADT-------LTTSLGPVMHRVVMPHFDV--DKPEGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTV---TGNK----IEVSAEPHVGEVVILQPPVMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLD-SQPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVGS----------APASQP 1951
            ++  PF   L+ + +  YR  Y                        K+ G KGE                 L E++ F     I  + D ++ +R+ Y  FR+G   G++GEV  +  + +  H + +PV Q   L    K+ +       PL R +H HFG G+L +GL+  AMA     E+ R ++++      ++ +VK  H  V F VNG   +  + +    +Q+ + L+         AP     +    P    KV      A  T        + SLGP + + V P      DKP+G+R  +YGCEND   VE+LGE LKGK + V CMVDRIC  R+V    G      + V+AEP  GE+V+L PP  AP PAF G NV++P+   +A YFC+RKI  VNGMHTTLAF+TLC+ EKG+ PG H+L+T   A++  +  +W WAV+R +L ++EHDV+II+ AH+++TD EVC++L+ YA+ +L RF TV+DTT RVL GG+ NR+ TRLK+  ++LD S+P        LL+ A +    +   V+ LV D+ RF  +          APA+ P
Sbjct:    3 SIGTPFHPVLDTDPVKQYREDYRKXXXXXXXXXXXXXXXATSRPRSKSQGGKGE-----------------LPEDSIFGGSDDIQNMYDLLTEWRVRYRAFRRGEAHGSEGEVGRLASMFNKDHLKLLPVWQLRALQVYLKKQQLLPAVPPPLKRKIHFHFGAGKLALGLIFKAMARSAVQESSR-IVVVQRASDAWQDVVKHSHPDVTFSVNGTAVMA-LKVCRPGEQIDKSLFLSDEPVGAAAPCGYFLLHGSTPEETAKVDELISWAVSTDCPLRAVFSASLGPALEKGVSPVLSKLEDKPQGKRPAMYGCENDQKAVEKLGETLKGKVDTVKCMVDRICAERSVIVPAGGDLPCDVNVTAEPFSGEIVVLSPPEDAPRPAFVGGNVQIPILEAQARYFCQRKILCVNGMHTTLAFMTLCKFEKGNRPGEHELMTWETATEAEKERLWAWAVSRCILCVFEHDVDIIKSAHNVTTDKEVCEILLAYAKKTLDRFSTVKDTTTRVLSGGIVNRYQTRLKMVQDFLDASKPDSSPAGRELLRQAGISAETLQGHVRALVADAKRFASTEGQADQQTPAAPAAAP 568          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: A0A7S4LFU9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LFU9_9EUGL)

HSP 1 Score: 318 bits (816), Expect = 9.320e-89
Identity = 190/469 (40.51%), Postives = 271/469 (57.78%), Query Frame = 2
Query:  614 YRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARF--MPVGQRANLIRTTK----EAEAKDPPQTPLTRLHVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGH-KTVDFYVNGEPTLTGVSLITSEDQLPEDLYAPNLKLFVCSINPSLQRKVVNAADTLTTSLGPVMHRVVMPH----FDVDK--------------------PEGERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVMAPLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGD-VPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRF 1924
            +R++Y   R G  +GAKGE+SA+   ++     F  +PV +  ++ R         E   P  T    LHVHFG GRL +GL+ PA+  +GRP  +I  P G+++++V++G  + V   +NG  + T ++LITSE+ L      P  +L VCS +  L R ++  A T + +LG  M  V++P     +++D                     PEG R  IY CENDH  VE L  ++    +VV CMVDRICT R+VT +++ + AEP+ G VV++ PP  APLPAFAG  V +P T   A Y CRRK+  VNGMHTTLAF+TL   E G  V G++ L+T   A++E +  IW WAVAR  L+++EHDV ++  AH + T DE+   L+  +R  LKRFDT +DTT RVL GGV NRW TRL     +LD+ P  G +  RL+K A +   ++  SV++LV D+  F
Sbjct:  115 WRLAYRNHRIGAAKGAKGEISALAAQLNHKKPDFKLLPVSEFLSMQREVSLHGSTTEISRPEVTD--SLHVHFGAGRLALGLIIPALHASGRPFAVIQRPSGEFKSMVEQGGGREVHLKINGAVSTT-LTLITSEEDLA--CITPTSRLLVCSEDERLTRVLLAHAPTSSCALGAAMSNVLLPLLEDVYELDTYSRDQVSEAWEIVRAAFPSMPEGCRPAIYCCENDHKAVENLEARMASAMDVVACMVDRICTDRSVTESEVLLEAEPYDGSVVVMSPPWCAPLPAFAGPTVAIPETQAAAQYLCRRKLLTVNGMHTTLAFLTLREHESGPGVAGDYPLVTVKLATEEQRRVIWAWAVARCCLLIFEHDVGVMLSAHGVKTQDELVDSLLALSRDVLKRFDTADDTTRRVLSGGVKNRWETRLHNVQEFLDNGPL-GSLSMRLIKKAGITLEEMTKSVRDLVSDAKPF 577          
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Match: A0A0G4EUF0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EUF0_VITBC)

HSP 1 Score: 308 bits (790), Expect = 4.030e-88
Identity = 198/578 (34.26%), Postives = 312/578 (53.98%), Query Frame = 2
Query:  383 AVNLDKPFLATLEAEAITHYRRTYHNFRAGKAHGAKGETDQFHVEP------------DVPAVDEELLREETFFSLPGS----------------ITKVMDAISAYRISYSRFRQGYHRGAKGEVSAVTQLMSAAHARFMPVGQRANLI----RTTKEAEAKDPPQTPL-----------------TRLHVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGHKTVDFYVNGEPTLTGVSLITSEDQLPE--DLYAPNLKLFVCSINPSLQRKVVNAADTLTTSLGPVMHRV---VMPHFDVDKPE----GERTYIYGCENDHGMVEELGEKLKGKAEVVTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVM-APLPAFAGDNVKVPMTYGEANYFCRRKITMVNGMHTTLAFITLC--REEKGDVPGNHKLLTCADASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYARSSLKRFDTVEDTTGRVLGGGVANRWNTRLK-VALNYLDSQPRPGKIESRLLKMADVEYSDVCASVKNLVEDSHRFVG 1930
            A  L  PF   L  +A T YR  Y NFR G A GA GET     +             D+P   ++++  ++  S  G+                I+  +  +  +R  Y  FR+G  +GA+ E+S VT+ +++ H   +PV Q   LI     + K A   +  ++ +                 T+ HVHFG G+LG+GL+ P+M  + +   +I+     ++ +++    TV+  VNG   +T ++++ S D LP      AP L+LFV S   +   +++  A + +T+LGP + ++   +   +     E    G +  ++ CENDH  V+ L E+L+   +VV CMVDRICTGR VT  +I V+ EP  G +V++ P    A  PAF G    +P+   EA YF  RKIT+VNGMHTTLAF+TLC  +++  D P +H LLT A   +E Q  ++ WAVAR+L++L +HD  +I+HAH +  D++V ++LIDYA  +L+RF T+ DTTGR+L GGV NRW TRLK V L  +        +   +L+++ ++ + +  +V+ LVE+++RF G
Sbjct:    8 AYELALPFRPFLGGDAFTVYRMNYRNFRRGYAKGAAGETADVARQSSYINLQHQSAGRDLP---DKIIHVDSGESPGGASPGGQSYLMEDTEMLKISSFISDLDRFRSDYRNFRRGQSKGAQRELSDVTKNITSQHLALLPVSQLRQLILAGSESLKGASNYEKDKSLIVTDGGFRDRLQGRGFRPTKFHVHFGAGKLGLGLVVPSMVASNKSFAIINERLTSWQRIIEGSASTVNIKVNGTH-VTSMTVLRSGDPLPPLPPPDAPPLRLFVVSDEDAKIAQLICMATSYSTALGPAIGQIGTKIDEAYSGQTREADSGGLKPTLFACENDHKAVDALTEQLRDHVDVVHCMVDRICTGRDVTAEEISVTTEPDDGAIVVMTPSTPPAYAPAFGGSCFSLPLVEAEAQYFANRKITIVNGMHTTLAFMTLCHAQQDGDDDPRSHDLLTSATLPEEKQREVYAWAVARVLMILNQHDKHVIKHAHGVLEDEKVAQILIDYATRTLQRFTTIPDTTGRILSGGVTNRWQTRLKPVDLFLMTYDVDEIPLGKTVLRLSGLKETFLLKAVRRLVENTYRFTG 581          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig288.7849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMJ8_ECTSI2.270e-31482.63Mannitol 1-phosphate dehydrogenase n=2 Tax=Ectocar... [more]
A0A2Z4C3U8_SACJA2.660e-30382.55Mannitol-1-phosphate dehydrogenase 1 n=1 Tax=Sacch... [more]
A0A836CC36_9STRA7.400e-17454.13Mannitol 1-phosphate dehydrogenase n=1 Tax=Tribone... [more]
D8LI09_ECTSI2.990e-11841.21Mannitol 1-phosphate dehydrogenase n=2 Tax=Ectocar... [more]
A0A835YRM5_9STRA4.880e-11240.04Mannitol 1-phosphate dehydrogenase n=1 Tax=Tribone... [more]
A0A0G4F4M9_VITBC7.460e-10937.94Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
B7ZGN5_9PHAE6.930e-10885.13Mannitol-1-phosphate dehydrogenase (Fragment) n=1 ... [more]
A0A0G4I719_9ALVE1.300e-9535.38Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S4LFU9_9EUGL9.320e-8940.51Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0G4EUF0_VITBC4.030e-8834.26Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig288contigH-paniculata_contig288:28295..40783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score899.4
Seed ortholog evalue8.6e-259
Seed eggNOG ortholog2880.D7FMJ8
Hectar predicted targeting categorychloroplast
EggNOG OGs2BX5V@1,2S2EN@2759
Ec32 ortholog descriptionmannitol 1-phosphate dehydrogenase
Ec32 orthologEc-23_000570.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons14
Model size3822
Cds size1752
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig288.7849.1prot_H-paniculata_contig288.7849.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig288 28497..38915 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929876.6391473-UTR-H-paniculata_contig288:28294..284961622929876.6391473-UTR-H-paniculata_contig288:28294..28496Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig288 28295..28496 +
1691481050.7020435-UTR-H-paniculata_contig288:28294..284961691481050.7020435-UTR-H-paniculata_contig288:28294..28496Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig288 28295..28496 +
1622929876.8692124-UTR-H-paniculata_contig288:38915..407831622929876.8692124-UTR-H-paniculata_contig288:38915..40783Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig288 38916..40783 +
1691481050.8520103-UTR-H-paniculata_contig288:38915..407831691481050.8520103-UTR-H-paniculata_contig288:38915..40783Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig288 38916..40783 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929876.653194-CDS-H-paniculata_contig288:28496..287231622929876.653194-CDS-H-paniculata_contig288:28496..28723Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 28497..28723 +
1691481050.715424-CDS-H-paniculata_contig288:28496..287231691481050.715424-CDS-H-paniculata_contig288:28496..28723Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 28497..28723 +
1622929876.6670067-CDS-H-paniculata_contig288:29370..295331622929876.6670067-CDS-H-paniculata_contig288:29370..29533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 29371..29533 +
1691481050.725939-CDS-H-paniculata_contig288:29370..295331691481050.725939-CDS-H-paniculata_contig288:29370..29533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 29371..29533 +
1622929876.6791947-CDS-H-paniculata_contig288:29720..298511622929876.6791947-CDS-H-paniculata_contig288:29720..29851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 29721..29851 +
1691481050.7350385-CDS-H-paniculata_contig288:29720..298511691481050.7350385-CDS-H-paniculata_contig288:29720..29851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 29721..29851 +
1622929876.691534-CDS-H-paniculata_contig288:32816..329551622929876.691534-CDS-H-paniculata_contig288:32816..32955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 32817..32955 +
1691481050.7486508-CDS-H-paniculata_contig288:32816..329551691481050.7486508-CDS-H-paniculata_contig288:32816..32955Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 32817..32955 +
1622929876.7067459-CDS-H-paniculata_contig288:33694..337931622929876.7067459-CDS-H-paniculata_contig288:33694..33793Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 33695..33793 +
1691481050.7580717-CDS-H-paniculata_contig288:33694..337931691481050.7580717-CDS-H-paniculata_contig288:33694..33793Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 33695..33793 +
1622929876.7217772-CDS-H-paniculata_contig288:33993..341491622929876.7217772-CDS-H-paniculata_contig288:33993..34149Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 33994..34149 +
1691481050.767588-CDS-H-paniculata_contig288:33993..341491691481050.767588-CDS-H-paniculata_contig288:33993..34149Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 33994..34149 +
1622929876.7360022-CDS-H-paniculata_contig288:34731..348201622929876.7360022-CDS-H-paniculata_contig288:34731..34820Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 34732..34820 +
1691481050.777739-CDS-H-paniculata_contig288:34731..348201691481050.777739-CDS-H-paniculata_contig288:34731..34820Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 34732..34820 +
1622929876.7534537-CDS-H-paniculata_contig288:35013..351461622929876.7534537-CDS-H-paniculata_contig288:35013..35146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 35014..35146 +
1691481050.7869637-CDS-H-paniculata_contig288:35013..351461691481050.7869637-CDS-H-paniculata_contig288:35013..35146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 35014..35146 +
1622929876.7664685-CDS-H-paniculata_contig288:36240..364011622929876.7664685-CDS-H-paniculata_contig288:36240..36401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 36241..36401 +
1691481050.7991056-CDS-H-paniculata_contig288:36240..364011691481050.7991056-CDS-H-paniculata_contig288:36240..36401Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 36241..36401 +
1622929876.791123-CDS-H-paniculata_contig288:36829..368991622929876.791123-CDS-H-paniculata_contig288:36829..36899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 36830..36899 +
1691481050.8078833-CDS-H-paniculata_contig288:36829..368991691481050.8078833-CDS-H-paniculata_contig288:36829..36899Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 36830..36899 +
1622929876.8076143-CDS-H-paniculata_contig288:37293..373951622929876.8076143-CDS-H-paniculata_contig288:37293..37395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 37294..37395 +
1691481050.8168638-CDS-H-paniculata_contig288:37293..373951691481050.8168638-CDS-H-paniculata_contig288:37293..37395Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 37294..37395 +
1622929876.822473-CDS-H-paniculata_contig288:37659..377791622929876.822473-CDS-H-paniculata_contig288:37659..37779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 37660..37779 +
1691481050.8270683-CDS-H-paniculata_contig288:37659..377791691481050.8270683-CDS-H-paniculata_contig288:37659..37779Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 37660..37779 +
1622929876.8387637-CDS-H-paniculata_contig288:38397..384741622929876.8387637-CDS-H-paniculata_contig288:38397..38474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 38398..38474 +
1691481050.8360972-CDS-H-paniculata_contig288:38397..384741691481050.8360972-CDS-H-paniculata_contig288:38397..38474Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 38398..38474 +
1622929876.8563986-CDS-H-paniculata_contig288:38830..389151622929876.8563986-CDS-H-paniculata_contig288:38830..38915Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 38831..38915 +
1691481050.8441405-CDS-H-paniculata_contig288:38830..389151691481050.8441405-CDS-H-paniculata_contig288:38830..38915Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig288 38831..38915 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig288.7849.1

>prot_H-paniculata_contig288.7849.1 ID=prot_H-paniculata_contig288.7849.1|Name=mRNA_H-paniculata_contig288.7849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=584bp
MVYVVKIAHFILVLVLVVIVSPKVVSAFISSHSTLVTAGRRTSVSTTSTP
RLTCEMALPVAVNLDKPFLATLEAEAITHYRRTYHNFRAGKAHGAKGETD
QFHVEPDVPAVDEELLREETFFSLPGSITKVMDAISAYRISYSRFRQGYH
RGAKGEVSAVTQLMSAAHARFMPVGQRANLIRTTKEAEAKDPPQTPLTRL
HVHFGCGRLGMGLLSPAMAEAGRPVILIDGPFGDYETLVKEGHKTVDFYV
NGEPTLTGVSLITSEDQLPEDLYAPNLKLFVCSINPSLQRKVVNAADTLT
TSLGPVMHRVVMPHFDVDKPEGERTYIYGCENDHGMVEELGEKLKGKAEV
VTCMVDRICTGRTVTGNKIEVSAEPHVGEVVILQPPVMAPLPAFAGDNVK
VPMTYGEANYFCRRKITMVNGMHTTLAFITLCREEKGDVPGNHKLLTCAD
ASKEIQASIWHWAVARLLLVLWEHDVEIIRHAHDLSTDDEVCKVLIDYAR
SSLKRFDTVEDTTGRVLGGGVANRWNTRLKVALNYLDSQPRPGKIESRLL
KMADVEYSDVCASVKNLVEDSHRFVGSAPASQP*
back to top

mRNA from alignment at H-paniculata_contig288:28295..40783+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig288.7849.1 ID=mRNA_H-paniculata_contig288.7849.1|Name=mRNA_H-paniculata_contig288.7849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12489bp|location=Sequence derived from alignment at H-paniculata_contig288:28295..40783+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTACTAGTAGTATCTTTAGAACTGCGTGTCAGCTCCATTCGTTGCTGGTC TGTACCTGTTGTCGCTGTCGTGCATCTGGCTTCTCTAGGCTTCCCCGTCC GCGCTTGCGTGGCTAGAAGGGTGCTGTAGCAGGTAGCCAAGCACTACATC TCCACGCTCCGGTGTAGTTTGGCTTCCTGTTGCAATCAGCAAGCGGTTGC CAATGGTGTATGTTGTCAAAATTGCACACTTCATTTTGGTGCTTGTACTC GTTGTCATAGTTAGTCCTAAAGTGGTATCTGCGTTTATTTCTTCGCACAG CACGCTTGTGACCGCAGGTCGGCGCACCTCCGTCAGTACCACTTCTACTC CACGACTTACTTGCGAGATGGCGCTTCCTGTCGCGGTCAACCTGGACAAG CCCTTCCTTGCGACGCTGGAGGCAGAAGCGTGAGCATGGCCTTTCGCCAC CCTTTCGTGTACCCACTTAAATGTCTCGAAGTCAAGTCAACGTCAAAGTC AAATCTCGCAATTCGCCACGCAGGCAGGCATTGTGTAGTAGCGATCAGAT GCAATCCAACGTACTACCCTGGATTGAAGGAAACAGATTAGTTGATGGAA GAATTTTAAGCTTGTGGCAACCTGATATTTTTCGAATGCCTGTCATGTTT TTCCGTGTGTGCACGAGTTGGTCTGCGTGCGCGTTGCGTTCGGGTAATGC TCCTCTCCGTTCTAGTCCAAAATTCAACCTTTTCCTCTAAAAGTTCGTTC CGACAAGGGAAGACTCATGCTCCGCATTGAGTTTTTGATTCTGCCCGTCT ACCCCAGAAACAAGCGTGCAAGGAGCACAGGGCCTCGAATTAGAGAGGAA ACTTGACGGATAGCCCACAGCGCCGCCTCTGTATCAGGCGCTGCATATTA AGCGAGTGCCACGGCCGTAGAAGGTAGAAGATGTCTTGTAACTTGGAAAA TATATAGCCAAAGGAGAAATTTTTATACTAGTTTTGTGCCTGCACATACA ATTTGTACTGTCTGTCTAGCAATACGTAGTGCGCACTCATAACATTCATG TAACATGACATGACATGATATGGCAGGATTACACACTACCGCCGGACCTA CCACAATTTCCGTGCTGGCAAAGCACATGGAGCTAAGGGAGAGACCGATC AGTTTCACGTTGAACCCGATGTCCCTGCTGTGGATGAAGAGTTGCTTCGG GAGGAGACTTTCTTCTCTCTGCCGGGGTCCATCACTAAGGTGAGAGTCGC TCTACTCTAGTTACTACTATCTGTCTGCACTCTCTTACAATCGATTTGTT TCGTGCTTCAGACATCACGTTCAGTCTCTTATCTCTTTTTTGTATGTTCC TGTTCGCATCGTGTTGGGAGCTCATGTTGGTTTTATTCATGTGTTTGCCT TGTCATTCCTTGCCTTGCCCTGCCAGGTTATGGATGCCATCTCGGCCTAC CGTATTAGCTATAGTCGCTTCAGGCAGGGTTACCACAGGGGCGCCAAGGG GGAGGTCAGCGCGGTGACACAACTAATGAGCGCTGCGCACGCTCGATTCA TGCCTGTGTGAGTATCCGTAGCAAATCACGAATTATGAACATATACATAT TTAGGTTGTACTGTGCATTTCATCCTTTGAGTGAACATCAAATGATAGAT ACGGTCAAAGAGTCGGTTGATCTCCCAAGAACAACATACTCCGCCCAGGC CACGACAGCAGTAAGTTAGTCACTGCATGGCCTGGACTCTCATGCCTTTG TATGTTCCGGCGATGTGGCTTATCGTAATAGTATATGGGCACTATAGCTT CGCTTGATCGTTTAGGCTGGTAGACTGCCCTGCCTCTGTGTAATGTGCTC CGTAGCATCGTCAACAGAGGCCATACTTTCGGACAATTTCTTGCGCATGC TACAACTGTGCTGTTCCTTCACGTTCAAGTAATTTGTATTTTTTGCCTGT ATCGATTTGGTCATATCTCGCGTTGTGCTTTGAGGTCGCAAATCAGAGAA TGAAAGTTGTTGATGTGGATGAGCTTCCCTTATTTCAAGGAGGCCAGTTA CCATCTTGGGTGCCTTTTTCGCATAAGGATATTCAAGTTTGTACTCTTTG CCCGCTGGGCTTCGTAAACTGGTGATTTTGTTTTGGTCTACAATTCCAGT TGTATGCACGGGACAGTTGTAGCCAGACCCAGAAACCACTAAAGTTGTTA ATTTGCAGCAACCCAGAAGACCACTTGACAACGCGAAAATCAAGTGTAGG ATACTGTTCCGAAAAGGACAACGTGACCACGTCACGGTAAGCGTGCTGTC CTCCTGAGTATTGAGCAGGTGGGTTCATCACGTAAGTTGTGTTTGATCCT TTACTAAATCAGCGTTGCGCCTGATGAAAAGGGTACGCAGATACCCGGAA GATTTCAACTTTCAAGACTTTCACCTTCACGATACCTGTAAACTGTGGGC AATTTCGGCTCTGAGCCACTTTTTACTGGCGAATATAGGTGTGGTGCGTT GAATAATAGCCGTCACATCGAGAGACACGGCAAATGCAGGTTACGATCAG GTTACGTACAAACCGCATCCCTGAGGTCAGCTCATTCGTGATAAAGCGTT CTTAAGTTGTACCGTTTGTGTCTCATTGTCTTCTATGCGGTAGGTATATA CCTGTTGAGGATGATCGGCATGAGGGGAAATTTGGCCGACGAACTAAAGT TATATGTTACACGAAGACTTATGCCTTGGCCAGTTAGCTACGGTTCGGGT CAAGTTGCGATATGAATCTTGATGCTATTGAATTTTTTATCGTTTGATTT TTTCCGCCTTCGATTATCCGCCCAAACCTGACCCAAACGATTATTGTTGT ACACATCGCATCATGTGTTGTCAGTGCAGATGTCACCTGTACTGACGGTT AGCTCTTGGACGTGCGAAGAAGGGAAATTGACTTGCATCCCTCATTAGAA ATTCTACGAGTTTGCAAGACCGAAGACGTGACATGCCCATGGTTGTTTGC CGTGTGATTTGGAAACGTGACGCGCTTGTCGCTAACGTGCGGATAAATAT AAACTGTCGAATGTAAGGAAGCGTTTTCAAAACGATCAAATAGGAGACAG TTCCAAATATGCTTTTAGAAAGATGTACTTCCATTATGAAATTATGTGAT CAATCTTGAACTCTTGGTGTCGTCAGGATGTCGAGAGCTCCAGCTTGTTC TCTGATATGATGACTTGTGGAGCGGTGGGGCACACCGAGATCAGGGCAGA CAAATCGGCGAAGGAATCGATTGGATGATCTTGATCATGTGTCACTGTTA TACTTTGAGTTGCCTCCTGATGACATTTGCCCCCTTTTGGTGTCGTTGCT CATGTGCTATTATTAATACTTTCTCTCCTATGTGCTCTTGCTGCATGTAG CTCGCGTGAGAGGGTGAAACTTTTTTTCTGTAGCTCTGAGCACCTTGCTC TTCCGGTAAATTGCAAATTTGTACATTGACGGTTATACCTGCCTCGCTAG CTACCTTAGGAAGCTGTTGAACTACGTTCACATCGAGTGTACTGTTTTGA AGAAAAGCCATCAGGCGTGGCTCCGGCCCGGAAGAGCTCCAGCGTGTACA GAAAATTTTGTGGGTTCATCAACGTGCAGCGATTCTCGCCGACATTCAGT TTACGGGTTATGTCTCGTACCAAAAAAAACAGTTGACCAAGTTAATGCCC GACGCGTATCCACGAACAGTGATTGCGTCAAAAACGTTTTTGCGGTGTAA AGAAACTGACTTACGTTCATTACACTGATGACTTCGGGACTCGTACAACG AAGGGTAGCACAAGCCGTAGATTTCCGTTGACGACTATCTGTGCGTGTTT GACTTTCTCGTTATAGTGGTGTCTTATTGAGATACATGAGGCGATTTGAT CCTTTCATCCCCAATAGAGTTTCAAGAGCAAAAATAAATGGCATCTGCCA AAAAACGTCGAGTGCTGCAGTATTTATGGGCAAATGATACTACCCAACTA CCTGTCTGCCCTGCGTGTAGTGTATATGTTGAACGGTCTGTCTAAAATGC AGCGCCCCCGTGTCCCCGTAATGATGTCATGTGCATTGTTTTTGCACGTC CTTTTTTGAGATGAGACGGTGAATTAATAGGATCTCGCTGTGAGAGGGTC GAAAGCCATGATACGCAGGCATGAGCACAACCAGTCACACTCACAGTAGT TTGAACTCAAGTACAGTAGTATCATGTAGTTGCAGCACAAAAGGCATGAG TAAACCTCCACAGAAGTAAGATGGGGTTGCTGTAATGCCGGCGGACAGTG TCCAACCTGAGTGCAAAAATCAAAGCAAAATTAATTGGAAGTAAACCATC TGTATGTGTTGATTTGATTCTGAACGAGAGCAAGGATTCAAGGATTGCGA TAACCCTTAGCGCACGAAAGCCAATTTTACTTGACTCTGCCGAAAGGGAA CGTGTCACACTTCACTGATTCTTGTTTATGTTGTCCCTCGACTCGTAATG TCTGTCATGTACCAATCCACAGGGGTCAACGCGCAAACCTTATCCGTACG ACCAAGGAAGCTGAAGCTAAGGATCCTCCACAGACGCCATTGACAAGGCT TCACGTGCACTTTGGGTGCGGCCGTCTCGGAATGGGGTTGCTCTCCCCTG CAATGGCGGAGGTTAGTTTGCTTGTTTAAATCATCTCATCACGAATACAT TAATAAAAGCACTAAATTTCATGTTGAGAGCAAGTTAGTTGAGTGTTACT GAGAATTAAGGTCAACGTACTGGGGACGGCGAAGTTGAAGCTCTTCACAA TGACGATTGCATCGCTGTATACCTTTTTCATGCGTGGTGATTCGTCGCCC CTTGGTCGCCATTTGTCATGTTGTGCACCATGATTGAACTGTTGCGTTTT CCATGATGTTCGTATATGTTACACACAGTTGGTTCCCAGAAGTCTATTCG ACTTGCCAAAATACATATTGAAAAAAATCAAATCCACATCGTATGATATA CGTTCGTGGACGATGGGAGTGTGATGCACACGGCGAGAAAAACCTCAACC GATGGCCAACCATAAAAACAAGCACCGTTCGTTTCCTGGCAACAGGCCCC TCTCGTCCAGTACTACAGTGTGTGTTATTGTCGAAGGAGTTGTTTTTTGC TTCTCGTAGTACAAGAATCCAATCCGCACTCTTGAATACTATGTGCTGTG TTCGTCAAGACACCAAGCTTATTCGTTGTGGTGTTTTCATGTGATGAGAT AAGAGATGAATGAGTGTTGCCGATCCGTCTGAAAGTACTGTCAATATGTC CAACTTCCTCATGGTGGTCGCTCGATCACTTCCTGTACTGATCCGACCCG ACGTTGGCACTTCGTTGTGTGACATCACCTCACCTCATCCCAACTCACAG GCTGGACGTCCCGTCATCCTCATCGACGGACCATTCGGTGATTATGAAAC GCTTGTGAAGGAGGGTCACAAGACCGTCGACTTTTACGTCAACGGCGAGG TAGGTCACATTACGTAAGTTTGATCGTCGGGTAGGTACTTGACCATGAGT AAAAGTGCAGTAAAGTGAAAGAAGGAAGCAACCAATACGAAAGGCGACCA TCGTAAAGTCAATTTCTTCATTAAACATGGTTGAAATGTTGCCTTCCTGC CTTCCTGCCTGCCTGATCCGTCGAATGTAAAACATGTGCGTACTCACAGC CCACTTTGACAGGCGTGAGTCTGATAACAAGTGAGGACCAGCTGCCAGAG GACTTGTACGCTCCCAACTTGAAGCTGTTCGTGTGCTCCATCAACCCCAG CCTCCAAAGGAAGGTGGTTAATGCGGCCGACACCTTGACCACCTCTCTTG GCCCGGTGAGTGTCTTCACCTGGAGGTCATTCACTATCGTAGTCACCATC ACCATTGTACGTGCTAGTGTAGTGTAGTACTCTCGTTTCAACTAAGGCTA CAGTCGCATAATCATTACAAGTAGTGTAGAGCATGGTCCATATATGAAAC ATACCATTATTGAGGAAGTGCGAGAAAGTCCCAGCTTCTCAACAAAGTCC ACACGATACAATATCCCATAATTATTTAGTTAAGTAATCAGTGCCCCATG CGATATCCCCATCTCCTGATTTTTTCATGTTTTTTATTCCAACACTTGTA TTCTGGTATTCACAGCTATTTAACTATAGCTCCAGCTAGGTAATCGCCCT CTTATTTTTGTCATGTTAAGTTGGCAAAAACCTCACAAAAGTCACCCAAG CAGCAGGGTCAATGTTGTACTTCACTGGGTTATGGATCATGTAAATCTCA AACCTTGAGAGAGCAGAGTAGTGTTCAACATGGGGGACGGGGGTAGCCAC GTGCACCGTGGTAGGTTGCAAAGCACTGTTTACCGGCTAGCTGACTTATT TTGTTCTATGTGTATTGTAATGTATCTCTTGATCCAGGTGATGCACAGAG TGGTCATGCCCCACTTTGATGTGGACAAGCCAGAGGGGGAGCGCACGTAC ATCTATGGCTGTGAGAACGACCACGGGTGAGCCATTTACACTAGCCACCA GTATTGCTGTCTGTAGTGCTTGTTGCTGAAGGGCTTGAAGGATGGGATGG TGGTATCACCCATGATGAGCGATACGTTGCTCAAGTGTCGAGTCTATATT TTACCCTCATGGTTGTAGGTGGGCCTGTTAGGTCTGAGCTGTTGTTTTGT GTCATCGTGTTTGTTTCAGAATGGTGGAAGAGCTGGGAGAGAAGCTCAAG GGGAAAGCGGAGGTGGTGACCTGTATGGTGGATAGAATCTGCACAGGCCG TACTGTGACTGGAAACAAGATCGAAGTCTCTGCTGAGCCACACGTGGGAG AGGTAAAAGCGCAACCACATTGACAGCTTGAAAACATCCAATTCGGTCAG GAAAGGAAGCCAAGCTATACTATCCTAACACCCTTTTGACATATTATTCG TACGCTGTTTTAGGACTGAAGATGAGTAATTTAACCTTTGGACTCTCGGG GGCCACTTTGTGACATTTGGTGACTGTCGAGAATTGTCATTTCCACGATG AGCAACGATAATGGCATTGATGATCGTTTGGCCCAAATAAGAATGTGGAT CAGACCTATGCGGAAAACACGTAAAAATAGTAGCAGATATGGCGCAGAGG GATATTTTGAAAGAGCAAGTTGTGGTCGAAGTATTATAGCAGAAAGAGGT GGCAGGAGCCAAAGAGAAGTGCGTCAAAGGCTGGTGGCTGCAGCCGCATC GCTGTGTTTGTAATTAGTCTAGATGGTACAGCAAACGGCTTGCAGTGTAG ATATGGATTAACTCGCGGTGACAGGGAGCTGGACACGGATTCGAGCAGAT ACCTATTTCGTGGAATTAAGAGTTGTATAGAGGTGGTGACCAAAGAAACC ATCTTAGTCTAACGTTTGGGTGCGTGCTGCCCTTCTGCGGTTTACTGGAG AACCGCGAAGAAACAAGGGAAGGCAGGTTAGTGGATATCAGTACCAACGA AAAGATCCCTGGCGATAGCGTGTTTGTGGCGACCTGTTTCGCGTGATGCT ACCCATGTAGACAGGACCACACAGGCAGGCATCCTCTCGCAAGTGATGAT GAGCAAAGCATGACTGAAACATACGTACGCAGGGGATATTCGCGTTATAA CAAACATAGCTCGCGCCCGTACAATCAGGTGTTGGAACTTCCTAACAAAG TATTATTCCCTTTTATCCTTTTTTTTCCCTTGGGGTCAAGGTATCAAATC ATGAAGCCTGTAAATATCCTTTAGCAAAGCGTTCGAAATTCAGCAAGAGC GGGTTGGTGTTTCTTTTACGCGCCACGCTCCCAACAACTTGCATATTGCG CCACCCTTGTGTGGTTGATTGTAAGGATTTGATGACATGTAGGTTAGTCA TGATGTCGAATTTTTGCTCTGGAACTTCGAAACTTGACACGCACAGGTGG TGATCTTGCAGCCGCCGGTGATGGCGCCTCTGCCGGCATTTGCTGGTGAC AACGTGAAAGTGCCGATGACCTACGGTGAAGCAAACTACTTCTGCCGTCG CAAAATTACCATGGTCAACGGCATGCACACCACGTTGGCTTTCATCACGC TGTGTAGGTGTGCCATGCTGTCCTGTGCTAGCCGACAACATCAGTGTGAT GGTGTGAGAATAGAATTATCAATTCCTGTTGAGCAGATATGCTACGTCGG GTTTGAATGCATGAATGGCTCACTTCTTTGCTGGGCACCCGTATTGGTTA AATGTGTTTCATGTATTGTACATGTACTGGGTAGAGCTTGGTATGGTGAG CGTGACCACGTTGAGTTCACTTTATGTCAGTCACTGGAACCGGTTAATTA GGCTTGGTGTGTATTCCCACACTTACGTGGTAGCACGTGGCACATGCAGA ATTTCTTTCTCGGCGTTTGAGCGTGAAGAAAGCAACCCTTTGATTCATTC GAATCATGCTACCATTTTTTTTCATTTTTTGTATTACCATTTTAATCTCA AACGGTATGTGTTTATATCACATGTGATTCTACAGGGAGGAGAAGGGAGA TGTCCCCGGCAACCACAAGCTACTGACCTGTGCTGACGCGTCCAAGGAAA TTCAGGTATGCCGAACGATCGAGTTGTACAACACAACAAACTAGGGCATA ACACAGCACTACTCAAGCACGGCATGGTATTCTGGTTGAAGTGGTTAGTT ATTTCCCCCGACGCCCTTGCGTTTGTTTTTATCGCCAAAGTTGGTGTTGC ACAAAATTTGGCACTTTCCCGTCACCTCACATTACGTCTTGTGTGTGTAA AAGTTGCGAATAGCGACACGTTGTCATCTGTTGATTTATGTGCATATTGC TCTCCAGAACTTGGCGTATCGTTGAAATACAACTCATGATGGCGAACTAT GATGTCACGATTGTCGTCCATCACTCGGGCTATGATTCGCAGATTCACAG ATAGATATACTTTTGATGTACCCTTAAACTTGATCCTAAACCTTGACAGG CATCGATCTGGCACTGGGCTGTGGCTCGTCTGCTGCTGGTTCTGTGGGAG CACGATGTCGAGATTATCCGTCACGCACACGATTTGTCCACCGACGACGA GGTGAAATCAACACATAAATGCACAACACTACACGAGAATACAGTAGTGT CATCTCAGACGTTGAGCATAACTAATAACCGCATTGTAACGTACGTAGCA AGGTAGCGGAACAAGTATCACATTGGGCTCTACCGTCTCAAGTATGTTCG TCGAGGTACTCGTCGTTGGCTAACTAGTTATTACAGCTAGAGGGAAACTT GATATCGTCTACAATGAAATCTATTAACTTTTTTTGAAATACTTGGTCTT CGTGCTGTGCTACAGGTGTGCAAGGTGCTGATTGACTACGCGAGGAGCTC GTTGAAGCGATTCGATACGGTGGAGGACACTACGGGAAGGGTGTTGGGGG GTGGCGTTGCGAACCGCTGGAACACGCGTCTCAAGGTAATGAAACTATCA GGAGGCAGACAGACATCGTACATGGTGGAAGTGGTGCTTTTGAGACAACG ATTGTGAGGGACTCAGGCTGCTGAGAGATAGATACCGAATTTGGGATGTA TTGCGAGACATGCAGTCGTTTATCTTGTATCCTGTTCCTTATAGTGATCC CGGGTACTGTTGCCGTAGTCTCTGGTGGCAGTACATATGTTGGAATTATT ATTCAGATTATGACGGGTTTGTGCGTCCATTGAAGCATGACATTCTTGGT CAGCCTATGAAGTAATCAATATGTTATTGCCGTAAGTGTAGCATGCCTGG CATTATTAAGAACGATTTATCGCGTTTATCGAGCACCTCCAAACGGTGCC GACGGCAGGGAGAGCCCGTTCATTTTTCTATATGGCAAGTATCTCATTGT TCTTGTTGAATGTACCTTTCGACATTATACAGACTCGGATACAGCGTTCG AGTCACTACACTTGAAATTAACGTTGATTGTGTGAAGAGGGCAATGTCCA CAATCCAAATGCATGGTACACTGATCATCTCGAGAAAGAACACTCACCTT CCTCAATTCGTTGCTCTCTCTCACCTCATACGTCATGTCACACTACTGGG CAGGTGGCTCTTAACTATTTGGACAGTCAACCAAGGCCCGGCAAGATAGA ATCTCGCCTGCTCAAGATGGCCGACGTCGAGTAAGTCGTATATAGTATAA ATTTGCAGGTAATAGAACGAATATCGGAAACCATTTCATGCGTTGGAACA GTAAAGTTTGTGGTGGCAACAGCTACAGCAGTAGTAGTCACTTTTATATA CAAGTTGACTATTGGTTCTGCTGAAAGGTATTGGCGCAAGACTTGTGGTG TTACACGTGGACATTCTCCCTCGATTGTTGGTCCTATGTCTCTAGTCTAA AATCATAGTACTAGTAAGCTTCCCAAAGTGAGTACGGGCACTAACGAGCT GTTTAGTTCTTATTCAGCGTTTAGCAGCAAATTACTGATACTGATGTCAC ACTGCTTTTTGTCGCTTCATTTGTGTTGTTGAACAGATATTCGGACGTAT GCGCAAGTGTCAAGAATCTTGTGGAGGACAGTCACCGCTTCGTTGGCTCA GCGCCCGCATCGCAACCCTGAAGCTGTAGCGAAAAACAATACCAGCGTAG GCTTAGTGCCTTGCTTGGGGTGGGCGCTTATCCACCTCTACCGAAAGTGC CGCCTGCCTGTTTAGTCTGCCTGGCTGTATTTGCATGGCTGCGTTGTTTT TTCTCAAATGCAATGGATGTTGTTCTATGTCCGTTGATGGAGGTTAGTGT TGGTTCATTTCATTCACGCAAGCTGCGGAAGACGTTTGCTGTAATCTTTC CCAGTAGCTTTGGGCCCGGGCGTAATGTTGTGGACTTGCAACCGTTGAAT ACCAAAAAACACGGGAATTGTTTAAGTGACGGAATCTCTTAAAATCTTCC CGAAGAGTTCCCACGCGTACGGTACAGGAGACAGCAGCAAAACAAACCCC TCGAGGTCGGTGGAGTCGGCCACATGAAAAAGTGATTTTGTCAAGCGTCA ACTGAAGTATGTTGGGAAATTATGCGGTCTCGTGGACCAATCTAGTGGTT CATATAGTTGAGAACGTGAGCACAACCGCATGGGAAGTTGGTCGAGGACA GTGGGGACTTTTTCTTTTTCCGCGATAGACGAAAATGCGCTTTCGTCTCA TCTATTCTTCGATGTCATCGATGTTAGGTGACACTGATGTCGATATTTTA TTGGTTACTGTAAAACCCTTCACGCACCGGGTGCGATTATTTTTTCATTT GCATTCCTCGAAACTTACGATACTATGGACGACAAACGTGTGTTGTTGGA AATATATTCTCCAAAACTGCCGAATACACGTGCTTTTCCGGAACTACTCA AGGATCGTTTTTCTAGAAAAGGTGGAATTGAGGATTTGTGTCCCCCCATT GTGCCACCAACTGGTGTTGCGTTATTATTTGTTCGAGGTGAGGACTCTTT TCCATTTGCCATTTTCGTTTGTGTGTGTTACCAGCGTCGCCTGAAATGAA CACTGTATCCTGATTTGATTTGGTTATTTGGTTTGATTTTACGGTGTATA GGGACATTCTGTCGATCTCAGGAACTGTGTGGTGTAAGGTACCTTGATGT AGCATGTCGTGGGCGCGTTAGGTGTGATGGTGATGTGTGTCTCGCCCCCA TCTGGTAAAGGCAGAGAGGGAGAAGAGAAATCCGTAATTTTTCCATGGGT GATGCATACCGTCAGTTCGTAATCATGTGTGTGATTGACGCTGTGGTGAA TATTCTGGTAATTTCTACGTTACATCCCGATTCTTGACACCGCGTACTGG GAACAGAGTAGGAGAACCGCAAATCCTTTACCCTGAATTAATCGTCACAA TTTTCAAGAGCTGTAATATAATTTGCTCGTTGCCATTTCATGGGCCAAGT GTGGCGAAGCGACATTCGCGGCGAATGTTGGCCGAGCGGCCGGAACGCCG AATGGGCGAAGACATAGTCATGAATTGTCCAAGCGCCGAATCTCACGTAT GATGAGTACAGGTGGACGAAAGGTACATGATCGTTATCCTGTAATGAAGA GTTTGTCTAAATCAGCAAATAGTATTGAAATCGCACAAGTTGCAGTAGTG AACTGGATCGAATTTAGGCCATCATTTCAGTGTGATTTTTTCGATTCTGA TCGATTTTTTCCGACCTGATACCAATAGCGTGAAGTATTCTTGAGTGCTC CTTTAGTCAGACTGAGGACAAGAACAACTTTACAAAAGAAAAGGTGTCCA GTTTACGAAATAAGAGTACCCCTAGGTTTTGGCCGAAATCCGAGGGTCGA GAAATTGGCAGTTTTTTTCGTTCACGGAGTTCTTTTTCAGGAAGACATGA GTAAAACGTTCGATCAGTGCTGTCGATTACCGCGCCTTTTGGGAACAATG ACGGCATACTCTCGAAAACTAATCCAAGAAATGACCAGT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig288:28295..40783+

>mRNA_H-paniculata_contig288.7849.1 ID=mRNA_H-paniculata_contig288.7849.1|Name=mRNA_H-paniculata_contig288.7849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3504bp|location=Sequence derived from alignment at H-paniculata_contig288:28295..40783+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGTATGTTGTCAAAATTGCACACTTCATTTTGGTGCTTGTACTCGT
TGTCATAGTTAGTCCTAAAGTGGTATCTGCGTTTATTTCTTCGCACAGCA
CGCTTGTGACCGCAGGTCGGCGCACCTCCGTCAGTACCACTTCTACTCCA
CGACTTACTTGCGAGATGGCGCTTCCTGTCGCGGTCAACCTGGACAAGCC
CTTCCTTGCGACGCTGGAGGCAGAAGCATGGTGTATGTTGTCAAAATTGC
ACACTTCATTTTGGTGCTTGTACTCGTTGTCATAGTTAGTCCTAAAGTGG
TATCTGCGTTTATTTCTTCGCACAGCACGCTTGTGACCGCAGGTCGGCGC
ACCTCCGTCAGTACCACTTCTACTCCACGACTTACTTGCGAGATGGCGCT
TCCTGTCGCGGTCAACCTGGACAAGCCCTTCCTTGCGACGCTGGAGGCAG
AAGCGATTACACACTACCGCCGGACCTACCACAATTTCCGTGCTGGCAAA
GCACATGGAGCTAAGGGAGAGACCGATCAGTTTCACGTTGAACCCGATGT
CCCTGCTGTGGATGAAGAGTTGCTTCGGGAGGAGACTTTCTTCTCTCTGC
CGGGGTCCATCACTAAGGATTACACACTACCGCCGGACCTACCACAATTT
CCGTGCTGGCAAAGCACATGGAGCTAAGGGAGAGACCGATCAGTTTCACG
TTGAACCCGATGTCCCTGCTGTGGATGAAGAGTTGCTTCGGGAGGAGACT
TTCTTCTCTCTGCCGGGGTCCATCACTAAGGTTATGGATGCCATCTCGGC
CTACCGTATTAGCTATAGTCGCTTCAGGCAGGGTTACCACAGGGGCGCCA
AGGGGGAGGTCAGCGCGGTGACACAACTAATGAGCGCTGCGCACGCTCGA
TTCATGCCTGTGTTATGGATGCCATCTCGGCCTACCGTATTAGCTATAGT
CGCTTCAGGCAGGGTTACCACAGGGGCGCCAAGGGGGAGGTCAGCGCGGT
GACACAACTAATGAGCGCTGCGCACGCTCGATTCATGCCTGTGGGTCAAC
GCGCAAACCTTATCCGTACGACCAAGGAAGCTGAAGCTAAGGATCCTCCA
CAGACGCCATTGACAAGGCTTCACGTGCACTTTGGGTGCGGCCGTCTCGG
AATGGGGTTGCTCTCCCCTGCAATGGCGGAGGGGTCAACGCGCAAACCTT
ATCCGTACGACCAAGGAAGCTGAAGCTAAGGATCCTCCACAGACGCCATT
GACAAGGCTTCACGTGCACTTTGGGTGCGGCCGTCTCGGAATGGGGTTGC
TCTCCCCTGCAATGGCGGAGGCTGGACGTCCCGTCATCCTCATCGACGGA
CCATTCGGTGATTATGAAACGCTTGTGAAGGAGGGTCACAAGACCGTCGA
CTTTTACGTCAACGGCGAGGCTGGACGTCCCGTCATCCTCATCGACGGAC
CATTCGGTGATTATGAAACGCTTGTGAAGGAGGGTCACAAGACCGTCGAC
TTTTACGTCAACGGCGAGCCCACTTTGACAGGCGTGAGTCTGATAACAAG
TGAGGACCAGCTGCCAGAGGACTTGTACGCTCCCAACTTGAAGCTGTTCG
TGTGCTCCATCAACCCCAGCCTCCAAAGGAAGGTGGTTAATGCGGCCGAC
ACCTTGACCACCTCTCTTGGCCCGCCCACTTTGACAGGCGTGAGTCTGAT
AACAAGTGAGGACCAGCTGCCAGAGGACTTGTACGCTCCCAACTTGAAGC
TGTTCGTGTGCTCCATCAACCCCAGCCTCCAAAGGAAGGTGGTTAATGCG
GCCGACACCTTGACCACCTCTCTTGGCCCGGTGATGCACAGAGTGGTCAT
GCCCCACTTTGATGTGGACAAGCCAGAGGGGGAGCGCACGTACATCTATG
GCTGTGAGAACGACCACGGGTGATGCACAGAGTGGTCATGCCCCACTTTG
ATGTGGACAAGCCAGAGGGGGAGCGCACGTACATCTATGGCTGTGAGAAC
GACCACGGAATGGTGGAAGAGCTGGGAGAGAAGCTCAAGGGGAAAGCGGA
GGTGGTGACCTGTATGGTGGATAGAATCTGCACAGGCCGTACTGTGACTG
GAAACAAGATCGAAGTCTCTGCTGAGCCACACGTGGGAGAGAATGGTGGA
AGAGCTGGGAGAGAAGCTCAAGGGGAAAGCGGAGGTGGTGACCTGTATGG
TGGATAGAATCTGCACAGGCCGTACTGTGACTGGAAACAAGATCGAAGTC
TCTGCTGAGCCACACGTGGGAGAGGTGGTGATCTTGCAGCCGCCGGTGAT
GGCGCCTCTGCCGGCATTTGCTGGTGACAACGTGAAAGTGCCGATGACCT
ACGGTGAAGCAAACTACTTCTGCCGTCGCAAAATTACCATGGTCAACGGC
ATGCACACCACGTTGGCTTTCATCACGCTGTGTAGGTGGTGATCTTGCAG
CCGCCGGTGATGGCGCCTCTGCCGGCATTTGCTGGTGACAACGTGAAAGT
GCCGATGACCTACGGTGAAGCAAACTACTTCTGCCGTCGCAAAATTACCA
TGGTCAACGGCATGCACACCACGTTGGCTTTCATCACGCTGTGTAGGGAG
GAGAAGGGAGATGTCCCCGGCAACCACAAGCTACTGACCTGTGCTGACGC
GTCCAAGGAAATTCAGGGAGGAGAAGGGAGATGTCCCCGGCAACCACAAG
CTACTGACCTGTGCTGACGCGTCCAAGGAAATTCAGGCATCGATCTGGCA
CTGGGCTGTGGCTCGTCTGCTGCTGGTTCTGTGGGAGCACGATGTCGAGA
TTATCCGTCACGCACACGATTTGTCCACCGACGACGAGGCATCGATCTGG
CACTGGGCTGTGGCTCGTCTGCTGCTGGTTCTGTGGGAGCACGATGTCGA
GATTATCCGTCACGCACACGATTTGTCCACCGACGACGAGGTGTGCAAGG
TGCTGATTGACTACGCGAGGAGCTCGTTGAAGCGATTCGATACGGTGGAG
GACACTACGGGAAGGGTGTTGGGGGGTGGCGTTGCGAACCGCTGGAACAC
GCGTCTCAAGGTGTGCAAGGTGCTGATTGACTACGCGAGGAGCTCGTTGA
AGCGATTCGATACGGTGGAGGACACTACGGGAAGGGTGTTGGGGGGTGGC
GTTGCGAACCGCTGGAACACGCGTCTCAAGGTGGCTCTTAACTATTTGGA
CAGTCAACCAAGGCCCGGCAAGATAGAATCTCGCCTGCTCAAGATGGCCG
ACGTCGAGTGGCTCTTAACTATTTGGACAGTCAACCAAGGCCCGGCAAGA
TAGAATCTCGCCTGCTCAAGATGGCCGACGTCGAATATTCGGACGTATGC
GCAAGTGTCAAGAATCTTGTGGAGGACAGTCACCGCTTCGTTGGCTCAGC
GCCCGCATCGCAACCCTGAATATTCGGACGTATGCGCAAGTGTCAAGAAT
CTTGTGGAGGACAGTCACCGCTTCGTTGGCTCAGCGCCCGCATCGCAACC
CTGA
back to top