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Homology
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: A0A6H5K2K6_9PHAE (TIP_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K6_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 1.030e-19 Identity = 55/99 (55.56%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 160 MSSDEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDEDGFGSGRGKKKGGRQGKQQGLKGDLSKPVGFVGGSG 456
MSSDEEQ+ GRRGGRMAFTDQNDFEGGRW+NGE++Y QR+GQ QT+D+++ GVF + SSDE K D SKP+ FVGG G
Sbjct: 1 MSSDEEQDGAGRRGGRMAFTDQNDFEGGRWINGEYYYESQRKGQMQTEDDRILGVFQDGSSDEXXXXXXXXXXXXXXXXXXXXXK-DHSKPMSFVGGKG 98
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: D8LQD4_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD4_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.970e-18 Identity = 45/63 (71.43%), Postives = 55/63 (87.30%), Query Frame = 1
Query: 160 MSSDEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDE 348
MSSDEEQ+ GRRGGRMAFTDQNDFEGGRW+NGE++Y QR+GQ QT+D+++ GVF + SSDE
Sbjct: 51 MSSDEEQDGAGRRGGRMAFTDQNDFEGGRWINGEYYYETQRKGQMQTEDDRILGVFQDGSSDE 113
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: A0A2V0PC38_9CHLO (G-patch domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PC38_9CHLO) HSP 1 Score: 74.3 bits (181), Expect = 1.260e-10 Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 1
Query: 169 DEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDEDGFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
DEEQ F NDFEGG+W+ GEFF+ +RR + QT+D++LYGVF E SSDE+ +GGR+GK++ D +KPVGFV
Sbjct: 2 DEEQRH-------ERFDVDNDFEGGQWIGGEFFHSGKRRKRQQTEDDRLYGVFAEGSSDEE---------EGGRRGKRERAAADYTKPVGFV 77
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: UPI000B8C98A2 (septin and tuftelin-interacting protein 1 homolog 1 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C98A2) HSP 1 Score: 69.7 bits (169), Expect = 3.540e-9 Identity = 35/73 (47.95%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 226 NDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDEDGFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
NDFEGG+W+NGEF+Y K+R+ Q QT+++ LYG+F VS + + KK+ R+ + G K DL+KPV FV
Sbjct: 14 NDFEGGQWINGEFYYEKRRQKQKQTREDVLYGIFNAVSDSDSDYDGSSSKKR--RKDRDFGRKADLTKPVSFV 84
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: A0A7R9V731_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9V731_9CHLO) HSP 1 Score: 68.6 bits (166), Expect = 4.500e-9 Identity = 43/105 (40.95%), Postives = 62/105 (59.05%), Query Frame = 1
Query: 145 LPFG--VMSSDEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDED---GFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
LP G M+ D++++ R F +NDFEGG+W+ GEF+Y+ +R+ + QT+D++LYGVF + S DE G G GRG G K D ++PVGFV
Sbjct: 52 LPGGQIAMADDDDEQHLDR------FDVENDFEGGQWIGGEFYYQNKRQKRQQTKDDQLYGVFADDSDDESRPRGLGGGRG-----------GRKADYTQPVGFV 139
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: A0A6A2WJD3_HIBSY (Septin and tuftelin-interacting protein 1-like protein 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WJD3_HIBSY) HSP 1 Score: 68.9 bits (167), Expect = 6.140e-9 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 214 FTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDED-GFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
F +NDFE GRW++GEF+Y+K++ + QT+D+ LYGVF S DED G+ S R ++K + G K DL+KPV FV
Sbjct: 10 FGMENDFEDGRWIDGEFYYKKRKEKRTQTKDDVLYGVFASDSDDEDSGYSSSRKRRK------EFGKKSDLTKPVNFV 81
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: A0A6A3C2L7_HIBSY (Septin and tuftelin-interacting protein 1-like protein 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C2L7_HIBSY) HSP 1 Score: 68.9 bits (167), Expect = 6.460e-9 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 1
Query: 214 FTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDED-GFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
F +NDFE GRW++GEF+Y+K++ + QT+D+ LYGVF S DED G+ S R ++K + G K DL+KPV FV
Sbjct: 10 FGMENDFEDGRWIDGEFYYKKRKEKRTQTKDDVLYGVFASDSDDEDNGYSSSRKRRK------EFGKKADLTKPVNFV 81
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: UPI001262C291 (septin and tuftelin-interacting protein 1 homolog 1 n=3 Tax=Anacardiaceae TaxID=4011 RepID=UPI001262C291) HSP 1 Score: 68.6 bits (166), Expect = 8.800e-9 Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 169 DEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDEDGFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
D+EQE F +NDFEGG+W+NGEF++++++ + QT+D+ LYGVF S +DG+ R R+ + G K DL+KPV FV
Sbjct: 2 DDEQE-------MERFGMENDFEGGQWINGEFYFKRRKEKRTQTKDDVLYGVFASDSDSDDGYSKKR------RKDRDFGRKADLTKPVNFV 80
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: A0A218VTU0_PUNGR (septin and tuftelin-interacting protein 1 homolog 1 n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218VTU0_PUNGR) HSP 1 Score: 68.2 bits (165), Expect = 1.160e-8 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 160 MSSDEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDEDGFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
M D+E E F ND+EGG W+NGEF+YRK+R + QT+++ LYGVF + SD D + S KK+ R+ + K DL+KPV FV
Sbjct: 1 MDEDQEMER---------FGMDNDYEGGEWINGEFYYRKKREKRTQTKEDVLYGVFADSDSDYDDYSS---KKRKNRESR----KADLTKPVNFV 79
BLAST of mRNA_H-paniculata_contig2874.7834.1 vs. uniprot
Match: A0A2I0IXI6_PUNGR (G-patch domain-containing protein (Fragment) n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IXI6_PUNGR) HSP 1 Score: 68.2 bits (165), Expect = 1.280e-8 Identity = 41/95 (43.16%), Postives = 56/95 (58.95%), Query Frame = 1
Query: 160 MSSDEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDEKLYGVFGEVSSDEDGFGSGRGKKKGGRQGKQQGLKGDLSKPVGFV 444
M D+E E F ND+EGG W+NGEF+YRK+R + QT+++ LYGVF + SD D + S KK+ R+ + K DL+KPV FV
Sbjct: 1 MDEDQEMER---------FGMDNDYEGGEWINGEFYYRKKREKRTQTKEDVLYGVFADSDSDYDDYSS---KKRKNRESR----KADLTKPVNFV 79
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 101.3 |
| Seed ortholog evalue | 9e-19 |
| Seed eggNOG ortholog | 2880.D8LQD4 |
| Preferred name | TFIP11 |
| KEGG ko | ko:K13103 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000228,GO:0000375,GO:0000377,GO:0000390,GO:0000398,GO:0000723,GO:0000781,GO:0000784,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006282,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0008380,GO:0009892,GO:0009987,GO:0010467,GO:0010605,GO:0016043,GO:0016070,GO:0016071,GO:0016233,GO:0016604,GO:0016607,GO:0019219,GO:0019222,GO:0022411,GO:0030154,GO:0030198,GO:0031012,GO:0031323,GO:0031324,GO:0031333,GO:0031848,GO:0031974,GO:0031981,GO:0032091,GO:0032200,GO:0032502,GO:0032984,GO:0032988,GO:0032991,GO:0033554,GO:0034641,GO:0042592,GO:0042752,GO:0043021,GO:0043062,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043247,GO:0043254,GO:0043393,GO:0043933,GO:0044087,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044421,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044877,GO:0045738,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051098,GO:0051100,GO:0051105,GO:0051107,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051276,GO:0051340,GO:0051352,GO:0051716,GO:0060249,GO:0060255,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070990,GO:0071008,GO:0071013,GO:0071014,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0098687,GO:1901360,GO:1902494,GO:1904875,GO:1904876,GO:1990446,GO:1990904,GO:2000779,GO:2000780,GO:2001020,GO:2001021,GO:2001032,GO:2001033 |
| EggNOG free text desc. | spliceosomal complex disassembly |
| EggNOG OGs | KOG2184@1,KOG2184@2759 |
| COG Functional cat. | A |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03041 |
| Exons | 5 |
| Model size | 1160 |
| Cds size | 999 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2874.7834.1 >prot_H-paniculata_contig2874.7834.1 ID=prot_H-paniculata_contig2874.7834.1|Name=mRNA_H-paniculata_contig2874.7834.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp
MSSDEEQEEGGRRGGRMAFTDQNDFEGGRWVNGEFFYRKQRRGQAQTQDE
KLYGVFGEVSSDEDGFGSGRGKKKGGRQGKQQGLKGDLSKPVGFVGGSGS
NKNSSNSSNKSSGQRRGGQKGVGGGGGSEGSGGTKKKEVRTGADDETDIE
SDGLDKEDDDDADSDDDFPTVAAQELKNQQHFRDLLNAAISTKPKPSTNN
TPTSGARPKSSPPAPPPPPPPPPPPPPPPSRGGLGFGGAGGGVPPLQTPG
AYPPSERAAEPKSNSDFRAFFQQATAPAVPVAPAVPAAPAAPAARSLDGG
AASSRMVGNQSAANHSSSAPALKGGTPAVVPAG back to topmRNA from alignment at H-paniculata_contig2874:1175..8925- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2874.7834.1 ID=mRNA_H-paniculata_contig2874.7834.1|Name=mRNA_H-paniculata_contig2874.7834.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7751bp|location=Sequence derived from alignment at H-paniculata_contig2874:1175..8925- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGACCGTTAGTCCAGCTACATGTTTTTGAGTGCCTCTGTACAGCTTGGG
TCGAGTAAGCAAGGTGCGTTGAGGCTTGGACACTGATAAGCATGTGATGT
GTGCTTTCGTCTTGAGATGCTTTTGATAGGGACTTCTGATGTTGTTGCAA
AGTGCAATGATTCAGTTCAGTTACAGTACAATAGTCAGGTACTGTGTGCG
CTGTTGTGGCTGCATTGCTGTTGTGCTGTACGACACACAGATGGCAGAGT
AAGCGCAGAGAGTAGTTGTACAGCAGTAGTTGGGTTATACATGATGGGGT
ATGGGGAAGGGTGACCTCCTGCAGACTTCACGTGACCGTGGTGATGATTT
CTCTAGTTACCTTTGCTTGGTGCTGTGTGCTAGCAGTCTCCTATTATACA
AGGTGTTGGCGGCCAAACGATGTCAACAGTGCCCTTCTCTACTTCACTGT
CTATATCGGCACTGTACTCTCGGTGGTACTGCACTGTGGCACACGATCTT
TCGTGTTTGTACCTCTTGCGGGTAGTTTATGAGTTAAAAAATTTCTTCTG
GTAAGTTTTCTCCGCCATGCTCTTCACGCGACACGCGCGGCGCTCTGGAA
GCACCTAGCAAGAGGGGACCTTTGTTCTTAGGCACCATTCTAAGTAACAA
TATTCAAAAAGTCCTCTATCGTATTTTTAAACTCCATACTAACTAGCATT
AGAGCCCCCCCGGCTACACCCATAAGTCTTCAGGGTTTCATCCCCGACCA
GATATGATGGTTCGTTGGCACTCTTACCTCCTAACAGTCGGCTAAGCACG
CAGTCGATGGGTCTCGCTGCGCTCGCATCATCGCAGGTACAGAACATAAT
AAATATATTCGCGCTTGTATATATGGTAAGAGGTAACTTCAGTTCAGGAT
TAGAAAACTGTTCCGAAATTATGTGATGTGACTCTCACAGAGACGAGTAT
ATTTGAACATGGATGCAGAGAGGTGAGGTGTGTACTTACTACTGTCCTGT
CTGTAAATGGCTAATAAAAGTATTTTGTATGGTTACTTAGTAAACCACCA
CCACACAGCAAACTCTAGTGTGCGAGAGTTGACGATCCCCTACCCTCCTT
TTTTTTATCTAGTTTTCTTAAAGTTTGAGGTCAGCTGTATAACCTCAACA
TACCCCCCCCCCCCCCGGTTATTTTCTCTTCTTGCTTTCGCCATATACTT
ACTACGTAATGCAAAGGTGTCCACTTGGTTCCTGGGCACGCTGTAATAAC
TGGTCCCCCGCGAATCAAGCGTCAGTTTTATATTATACCAGTACTGGCTA
CCTTTCGGCGTCATGAGCTCAGACGAGGAGCAGGAGGAGGGAGGGCGGCG
GGGCGGGAGAATGGCCTTTACCGATCAAGTGAGATGACCTCCTTGTCGGC
GAAAAACAAATAGGCGCAAAACTGTTATGTGACATAGTGTAGGTGTCGCA
TACTCGAGGCCAAGTGATGCTCCGTTCTTTTGTCTTGTCTCTTTTCTATT
TCTCACAGGGTAGCTCTTATCGACCGATCTTTCGCTGTTTGCGAAAAACG
ATGAATTCATGAAATCTAAAAAACACATGGCAAGGGGTGAAGTGCTTAAT
TGGAGATCGGTGTGCTTGCTTCAAGTTAATCTTAGGCGTGGAGACACAAG
ACCACCACGGACCCACCCAGGCACCGCCATGAACCCCCCAACCCCGAACC
AGTACAGCACTACCCAACACTACAAGATCACTCGAGGTCTATTTTAAAGG
GTATACATTCCTACCCACCCATCCACCCTGGCTCTGCTACCAACCCCAAC
CCAACCCAACCCTACCTTACCCTACCCTACCCAACACTACGGAAATCTCT
CGATAAGTATTATGTGGACCGATGTTGCCAGGGGGAGTTTCTATTGTCTG
ACCGCCCGTCTGCATGATCTGGCTAAAATATCTCTTCCAAAATAATGCAC
TGGCACCGCACCGCCTTAGGGCCCTTCTGAACGCTTTTTTTCTTTATTTT
GCGAGTACCCTGTACACAGCCAATAATGTACGCCGTAACACACCGTTTAA
CTCCTTCGGGGCTGGGCGCAAAGTCAGTGCGAATAATCCATTTGTCGCTG
TTCCGGTGGGGGGGAGAGTCTATGTGCCGACGGATCAACCAACCAATGCT
CTTCTCATGCAGGAGAAGAGATCACCCCCTTGCCTGTACAGTCAATCCAT
CACCTCTACTGCCATTTGTTTTTTCCAGCATGTTGATGCCTTCGAGACAC
GGTGCTTTTTTCGAAAGAGGTTTGAATATTTACTCCATCCGATGATTCGT
GTCGGAAATCAGCCGTTTTTCGAGCATGCCCAAAAAACAGATGAAAATGG
GGTCCCAAAAACAACTCTACGATGGACTGCGTCCCGTGGTCTGGTTACGT
AACTATTTTCTACTACACGAAAAAAATGTCCCGAAAACAGATCTCATAAC
GCAGATAGATCTTCAGAGAGCTCGGTCCCGAAAGGATTAAGGCTTATTTG
CCATCAAACAAATTGACCAAGAGGCAGATTTCAAATGACAGTTATTTTAG
GTGTTAGCCACGTAAGGGCCAATATCCGACCAGCCAACCATAAACCATAG
TAACCCCAACCTCCCTCTTCCCGATATTAAAGCCTCCTTGCTCAGACTGT
TGTACTAACACCCCATTATTATAGTACATATTGATTATACATCTCTTGGC
CAGTCAAGCACAGACACCTACTTCACAGCATGTTCAAGAATGATTCGGTC
TTCTGCGATTTATCGTTAATTCTCATCGTTGAATTTTTTTTTCGATTGGG
CAGAATGATTTTGAGGGCGGGCGATGGGTAAACGGCGAATTTTTCTACCG
GAAACAGCGGCGAGGGCAGGCGCAAACGCAGGACGAAAAGCTCTACGGCG
TCTTCGGAGAAGTCAGCAGCGATGAGGACGGATTCGGCAGCGGAAGGTAC
AAAGAACATTTCCTAATGAGACCACATACAGTAAGAAGGAGAAGCTGCAG
AATTGGACTGAATCCGACTCGTTCCGAGTTTGAAATGCCGCCCAATTTTG
AAGGATATACTTGCATCAAGCAGAAGCTGGGATTGGAAAGACGCGGAATT
GGGTGGATTCCGAACTACTCGATTCTGAAATGCCACCCAATGTTGAAGCA
TCCACTTGCATCAAGCAGAAGCTGGAATTGGGAACCTGCGGAATTCGATG
GATTCCGAACTGTTCCAATTCTGAATGCCCCCCCCCCTCCCCTCCCCCCC
TCCTAGTTCGTTCAGTTTGTAAAGGAGGAATAGTCCAGCAGGTTGAAGAT
GTTGCGCACACAGTTCTCTAATTTGTTTTACGGTCATTTTTGTCACGGGT
TTTTTATTTGATACTAACACTCCCTCTGTCCCATAAGTCTGTGCGGTTAA
GTTGTAGCTCTTCGGGATGACCTCCGATTACAAAACGGATTTTTGCGTTG
GATTCCTTGGATTATTTTACGTCAGGCCATCTCTTATGGTGTAAAAAAAA
CCGAGTCGAAATCGTGAAATCCCATTTTTTTGTACTGAAGATTTTTTATT
CATGCATCTTATGGGGTCAGAAAAACAGTTTTTTTGACACGTTTTTTTCT
TTTTTTTATCGGAGAAGATCGACAGCCCGCCGAGTAAAAAAAAAACAATT
TTTTAACTGGAGGATGAGATCCCCACAAAATCATAAAGATGGGAAATCAA
CGAGATACACAGGCGTGTTCTCCTGGATGATGTTTCATGGCCCACAGTAA
AACACGCGCGTTGGTCATAAGGTGTGAGCCCAGCCACCCTATGGAAGATC
TACAGGAATGGCAATCGTTTATATCGGCGGCGCTCGCTGCTGTAGTGGCG
GCCGTCGATATTCTAGACGAAGACGACAGATGTAGTCGACGCATGGATGC
AGCGGCGCTTGCTGTCTTTCCGAACAGACTGTGAGTTGCCCACCCAGGGA
GATCCAGCTCGGGGGTTTCCTTCACCCAGCGGAAAAAGCTGTCAGCGGCG
AAATCCTTGTAAAGCTGGACCGTCTTCTTGTATCTCTCGCTCAGAGGCAG
GGTCCGACCGTTCTTGTTAACAGACGCACAATGGTACCACTGTGGTACAC
TCTGTAGAATGATCCACTGTATCTTGCACACACCCGAATGTAATCCCTGA
GCCCTCATTTCCTTCCATACCCATTCCACGCAAGGGTTTGTCTTGATAAA
CATTACGGTGGATGGTGCATTCATGGCGGTCCGCTTTCACAGGATGACGA
TATGCTGGACGAGACCTCATTTGTTCGAAATACTCTAAACTTAATTGCGC
CGCTAGCAAAACGCCATCAAACATTCAACTAATCGCATTTTATGTTTTTG
ATTCAGGTCCGACCCCAGAAGAGATGAGCCATCAATTATTCTCAATCGTT
TTATTTCTCAGCAAAAAAATGAGATTTTATGATTTTGACTGGAAGTATTT
TTCATACCATAAGAGATAGCCTTACAGGTTTTTTTCCAGGAATTCTATTT
TTAGGGAAGCTCTAGAAAGGTCCCGAAAAAATGGAAAACGATAAATATGA
CAAGTTCAGATGATTTACTTCCTCTGTCTCGTTAGTCTTCCCTATGAACT
TTTAGGTCTTCGGAATGACCTCCGATTACAAAACGGATGTTTGCGTTGGA
TTCCTTGGAATATCCCGACATTGGGAAACAAGTTCTCTAGTAATTCTGCC
CATAAAGTAAGCTCTGAAGTTGTTCTGAAAGAATAGAACACAGCTTGAGG
GTATGTTCAGCTCATTTACGGCTCACATCTGAGTCGCACATGACGTATTC
TATGTTCTATTCCTTTGGAACCACTCGAGCGTTTGTTTCTCGATGTCAGA
TATTCCGAGGAATCCAGCGCAATAAGTCTGTTTTTGTAATCGGAGGTCAT
CCCGAAGAGCTACAACTTGACGGTGCCGACTTATGAGACAGAGGAAGTAG
CAATTTATACTTATCTGTTTCTGCTTTTTCCAAAAAGCATATGTTCATCG
TGTAAATGCCGTCCTGGTGATTGCCCTGTTGGTGATTTAATTTTTGCTGA
TAAAAAAGGGGAAAAAGCAAAAATTTGGAGTCAGCTGCATACAGTGGTGA
GGGGGCTAAATGTTAATATTTCAGATCGGATGTCGGCGATTAAACCCCCG
AATTCGACTCAAAAAATTACTTGATTTTGTTTTTTACAATCGGTAGATAT
TGGCGAGAGGATAATTATTGCATATAACAGGTGTTGTGATTCTCGGTTGC
TGTAGCGCCACAGTAGAAAAATAATATTATTGGGACTAAATTATGTTAGA
TAACACCCCCCCCCCTCCGCGCGCACCTAGAATGCGTTTTTTCGACTGTC
GCGCAACGAATTTTCCAAGTATTCAAAACATTTTTATCACGACATTGTGC
GCGCAATGTAATTCCGGAGTCTAAAGCCGAGGACCCCCGACGGTCGGTAA
GCCCCTGATTCGTTGAATTTTAAGCGCTCGGAAAACATTTCAACACCATT
GTGTGTGTGTATCACGCTAATCTCTATCGATCCTAGAAACTTTTCGCCCA
AAAGTCGACGCTGATACAACGCAAATGCCGAAGACATGCAAAAATTGAAC
GGCAAAATTGGGTCCTAAAATATGGTTCAGATATCGCCGAAAATACGTTT
TTTCGGCTGTAGCGCAGCGATTTTTTTTTCTAATTATTTGAAATAGTTAA
AATCACGATATTCATTGTCCACAATGTAACTTGGCACACGGTCACCAAAA
AAAAAAAAAAAAAAAAGTAGACACTAGCAAGCAATTCCGGAGTATAACGA
CATAGGGATTCTCGACGGCTGGTAAGTCCTTAACTCGTTCAATTTTTTTT
GAGCGCTTGAAAAAAAAACAAAAAAATTATTTTGTGTATCGTGCCAATGG
CTTTCGACCCTGAACGTTTGGGACAAAAATTGGACGCTGGTACAACATGG
TGTTTGACTAAATAGAAAAAACACGCAATATCTTCACCTGAAAAAATTGG
CCCCGTGACACCATTATACATCCACCTCGATAAGGGTAGAGGGTAGAGTG
GGGTTATTATGTGAGCTTCAGAGCTTTACCCCCCTCCCCCCCCCCTTCCC
CCCTGCCCCCCAAAACAAAATATTGTCATTCTCCAATTATGCAGGGGGAA
GAAGAAGGGTGGGCGCCAGGGAAAGCAGCAGGGGCTAAAGGGCGATCTCA
GCAAGCCTGTGGGCTTTGTAGGCGGCAGCGGGTCCAACAAAAATAGTAGC
AACAGCAGCAACAAGAGCAGCGGTCAGCGTCGGGGAGGGCAGAAGGGCGT
CGGCGGTGGGGGTGGGAGTGAGGGTAGTGGTGGCACAAAGAAAAAGGAAG
TCCGAACTGGCGCCGATGACGAGACAGATGTGAGTGAGGATGATGGCATG
AGTGATGTGTTCGGTTGCTGTCGTACTGTACTGTAGGTCATTTGAGTTTT
GGGTGTTTGGGGTTCGGTTCGGTACGGTCTTTGTTTTTTTCGGTTTCGTG
CGGTTCAGTGAGGTTTGGTCCGCTTTTGGTCCGCGTGGTCCGCATTGGTT
GGTTTGGTGCCGATGGGGTGGGGTGGGGTGGGCCGTGTATTACACTAATT
ATGTCGCTGTTGTCTTGCTAGCGGCGTGGTATGTCCCACGTCTCGACTGG
GTCGGATATGAATTTTATGTGAAGATCGGCTTGGTCGCGGTCAGGCATGG
TTGGTGTATTTTGCTGGCAAAGGTTGTTCTCAGGTTTAGGCTATCAGGTG
GACACCACACACAATACTTGGGGGAAGACGATTGACATGTGTGCAGCAGC
ATCGCGAGCCTAGTTGGCGGTGATGCAGACATAATACGCGTATGATTCTT
AGCGGTACACGCGCGTAAATCTAGCGCTGGTATGCACACAAATATGCTCT
TCTGCTTTTTTAAAAAGGAAAATATTTTGTCGTTCCCTCCTTCTCTCAAC
GCCTCTCCCCTCTCCCCTCTCCCAGTAAAAGCAAGACATGCTGAACTTGA
GAATGCCCCCTCCCTTATTCATGTACTTTAGTTCGTAAGTATACGTACCC
GATTGACGGTCAGCTGCATAAGATACAATTAAGTTATTATATTAGCGTTA
AAACTTAGTGCTCCCCCCCCCCCCCCCTCGCGCTCATTCACTCCCCCCCC
CCTTCCGCCCCCCTCTCCTTTTAAAAATAAAAACAATATACAACAGATAG
AAAGCGACGGATTGGACAAAGAAGACGATGATGATGCCGATAGCGACGAC
GACTTCCCCACAGTCGCTGCCCAAGAACTAAAAAACCAACAGCACTTCAG
AGACCTTCTCAACGCGGCAATATCGACCAAACCCAAACCCAGTACCAACA
ACACCCCCACCAGCGGGGCTCGCCCAAAATCCTCTCCGCCTGCGCCCCCT
CCCCCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTCGCGGGGG
TCTGGGATTCGGGGGGGCGGGGGGAGGGGTACCCCCCCTGCAGACGCCGG
GGGCATATCCACCATCTGAGCGGGCAGCAGAGCCGAAGAGTAACTCTGAT
TTCAGGGCTTTTTTCCAACAAGCAACAGCACCAGCAGTACCCGTAGCACC
AGCAGTACCCGCAGCACCAGCAGCACCCGCAGCAAGAAGCTTGGATGGCG
GTGCGGCGAGCAGTAGGATGGTGGGGAATCAGTCTGCTGCGAACCACAGC
TCGTCCGCGCCCGCTTTGAAGGGAGGGACGCCGGCGGTGGTGCCGGCGGG
T back to topCoding sequence (CDS) from alignment at H-paniculata_contig2874:1175..8925- >mRNA_H-paniculata_contig2874.7834.1 ID=mRNA_H-paniculata_contig2874.7834.1|Name=mRNA_H-paniculata_contig2874.7834.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at H-paniculata_contig2874:1175..8925- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCTCAGACGAGGAGCAGGAGGAGGGAGGGCGGCGGGGCGGGAGAAT
GGCCTTTACCGATCAAATGAGCTCAGACGAGGAGCAGGAGGAGGGAGGGC
GGCGGGGCGGGAGAATGGCCTTTACCGATCAAAATGATTTTGAGGGCGGG
CGATGGGTAAACGGCGAATTTTTCTACCGGAAACAGCGGCGAGGGCAGGC
GCAAACGCAGGACGAAAAGCTCTACGGCGTCTTCGGAGAAGTCAGCAGCG
ATGAGGACGGATTCGGCAGCGGAAGAATGATTTTGAGGGCGGGCGATGGG
TAAACGGCGAATTTTTCTACCGGAAACAGCGGCGAGGGCAGGCGCAAACG
CAGGACGAAAAGCTCTACGGCGTCTTCGGAGAAGTCAGCAGCGATGAGGA
CGGATTCGGCAGCGGAAGGGGGAAGAAGAAGGGTGGGCGCCAGGGAAAGC
AGCAGGGGCTAAAGGGCGATCTCAGCAAGCCTGTGGGCTTTGTAGGCGGC
AGCGGGTCCAACAAAAATAGTAGCAACAGCAGCAACAAGAGCAGCGGTCA
GCGTCGGGGAGGGCAGAAGGGCGTCGGCGGTGGGGGTGGGAGTGAGGGTA
GTGGTGGCACAAAGAAAAAGGAAGTCCGAACTGGCGCCGATGACGAGACA
GATGGGGAAGAAGAAGGGTGGGCGCCAGGGAAAGCAGCAGGGGCTAAAGG
GCGATCTCAGCAAGCCTGTGGGCTTTGTAGGCGGCAGCGGGTCCAACAAA
AATAGTAGCAACAGCAGCAACAAGAGCAGCGGTCAGCGTCGGGGAGGGCA
GAAGGGCGTCGGCGGTGGGGGTGGGAGTGAGGGTAGTGGTGGCACAAAGA
AAAAGGAAGTCCGAACTGGCGCCGATGACGAGACAGATATAGAAAGCGAC
GGATTGGACAAAGAAGACGATGATGATGCCGATAGCGACGACGACTTCCC
CACAGTCGCTGCCCAAGAACTAAAAAACCAACAGCACTTCAGAGACCTTC
TCAACGCGGCAATATCGACCAAACCCAAACCCAGTACCAACAACACCCCC
ACCAGCGGGGCTCGCCCAAAATCCTCTCCGCCTGCGCCCCCTCCCCCCCC
GCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTCGCGGGGGTCTGGGAT
TCGGGGGGGCGGGGGGAGGGGTACCCCCCCTGCAGACGCCGGGGGCATAT
CCACCATCTGAGCGGGCAGCAGAGCCGAAGAGTAACTCTGATTTCAGGGC
TTTTTTCCAACAAGCAACAGCACCAGCAGTACCCGTAGCACCAGCAGTAC
CCGCAGCACCAGCAGCACCCGCAGCAAGAAGCTTGGATGGCGGTGCGGCG
AGCAGTAGGATGGTGGGGAATCAGTCTGCTGCGAACCACAGCTCGTCCGC
GCCCGCTTTGAAGGGAGGGACGCCGGCGGTGGTGCCGGCGGGTATAGAAA
GCGACGGATTGGACAAAGAAGACGATGATGATGCCGATAGCGACGACGAC
TTCCCCACAGTCGCTGCCCAAGAACTAAAAAACCAACAGCACTTCAGAGA
CCTTCTCAACGCGGCAATATCGACCAAACCCAAACCCAGTACCAACAACA
CCCCCACCAGCGGGGCTCGCCCAAAATCCTCTCCGCCTGCGCCCCCTCCC
CCCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCTTCTCGCGGGGGTCT
GGGATTCGGGGGGGCGGGGGGAGGGGTACCCCCCCTGCAGACGCCGGGGG
CATATCCACCATCTGAGCGGGCAGCAGAGCCGAAGAGTAACTCTGATTTC
AGGGCTTTTTTCCAACAAGCAACAGCACCAGCAGTACCCGTAGCACCAGC
AGTACCCGCAGCACCAGCAGCACCCGCAGCAAGAAGCTTGGATGGCGGTG
CGGCGAGCAGTAGGATGGTGGGGAATCAGTCTGCTGCGAACCACAGCTCG
TCCGCGCCCGCTTTGAAGGGAGGGACGCCGGCGGTGGTGCCGGCGGGT back to top
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