mRNA_H-paniculata_contig284.7747.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI) HSP 1 Score: 354 bits (908), Expect = 2.910e-109 Identity = 190/308 (61.69%), Postives = 222/308 (72.08%), Query Frame = 1
Query: 265 DAALRQTVLDVSAALNSVYNGSGRTHREADQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWSATGKSAVITRICLALAALALQENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMK------------------------------------------------------VLPEEAVSHRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVDLLVE 1026
D A++Q V + AALN+VYNGSG +H+EAD+WLQ+FQ S++AWSV+DAMLRMESAELNVTFFAAQTIHAKIR NFRELP+ESIP LR+SLVDHL RW GKSAVITR+CLAL+ LALQ NW DV++DL+ RLM+AG EQQ Q ARV+LEFMK VLPEEAV+HR+V+ EAT+ AFL+QLC SS FLL+SL+QIA GPLGAE+MVQETVFQCLQSWVRHV+VP E+VR+PLL AAFDAL +ELFET VDLLVE
Sbjct: 5 DPAIQQHVAEALAALNAVYNGSGPSHKEADRWLQEFQRSQEAWSVADAMLRMESAELNVTFFAAQTIHAKIRSNFRELPQESIPSLRDSLVDHLERWGGAGKSAVITRLCLALSGLALQLNWPDVLRDLTGRLMRAGSVEQQKQAARVLLEFMKEAGAGRPSYVHRALHVTCRYIWVRLGDDVVSRSSRQQSYLRSTAASVLVLDECQVLPEEAVNHRIVVPEATQVAFLQQLCESSGFLLTSLEQIAAGPLGAEIMVQETVFQCLQSWVRHVNVPGDEVVRNPLLSAAFDALGNQELFETAVDLLVE 312
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A835Z666_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z666_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.440e-77 Identity = 135/250 (54.00%), Postives = 177/250 (70.80%), Query Frame = 1
Query: 286 VLDVSAALNSVYNGSGRTHREADQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWSATGKS---AVITRICLALAALALQENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVSHRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVDLLVE 1026
+ +V AL+ VYNGSG HR+AD+WLQ+FQ + +AW V+D++L M AEL VTFF A TIH+KIR +F ELP ++P L++SL HL RW AT K AV+TR+CLALAALA+Q NW +++LS+ +MQ+ P +QQ + ARVVLE MKVLPEE + V + + REAF + L S+ LL L ++A GPLG +VMVQET+FQCLQSWVR+ +P +L PL AAFDAL +LFE DLLV+
Sbjct: 5 IREVKKALDLVYNGSGADHRKADKWLQQFQQTAEAWQVADSLLMMPDAELQVTFFGAMTIHSKIRFDFHELPSATLPSLKSSLTAHLTRW-ATAKDLRPAVVTRLCLALAALAVQTNWTGAVQELSSAIMQSAPRDQQGRAARVVLELMKVLPEECCNKNVAVADDLREAFRQHLDASAPLLLGFLSEVAAGPLGQDVMVQETIFQCLQSWVRYTSIPPADLAAHPLFPAAFDALRTPDLFEAAADLLVQ 253
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: Q55HV7_CRYNB (Importin N-terminal domain-containing protein n=10 Tax=Cryptococcus TaxID=5206 RepID=Q55HV7_CRYNB) HSP 1 Score: 140 bits (354), Expect = 2.030e-32 Identity = 86/250 (34.40%), Postives = 141/250 (56.40%), Query Frame = 1
Query: 295 VSAALNSVYNGSGRT-HREADQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWSA----TGKSAVITRICLALAALALQ-ENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVSHRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVDLLVE 1026
V AL ++Y+ R A++WLQ+FQHS +AW + +L + L F+AQT+ AKI + +LP+ES+P LR+SL++ L S+ TG AV+ ++CLA++ LALQ W++V+ ++ R P T V+L F+K LPEEA + R+ + + A L +L S + + + + G +Q +VF+ L+SW++ +V A ++ +PL AA ALA +LF+ VD+L +
Sbjct: 6 VLQALQTLYHDPDTAAKRRANEWLQEFQHSTEAWQTAHVLLNAPDSPLEGRLFSAQTLRAKITYDLSQLPRESLPPLRDSLLNILLPLSSSSAPTGSKAVLLQLCLAISDLALQMPEWENVVPNMIERF--GTDPG----TVTVLLLFLKTLPEEATNPRIPLAQDEARAILNRLVSGSAGRVLEVLTMYIQAEGVTTSIQISVFEALRSWLQAGEVTASQVAATPLFSAALSALASDQLFDAAVDVLCD 249
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A7S2D4C3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4C3_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.220e-31 Identity = 97/261 (37.16%), Postives = 137/261 (52.49%), Query Frame = 1
Query: 280 QTVLDVSAALNSVYNGSGRT----HREADQWLQKFQHSEKAWSVSDAMLRMESA-ELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWS-ATGKS-AVITRICLALAALALQENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVSHRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGP-LGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKREL----FETGVDLLVE 1026
Q + ++A+ +N G R+AD+WLQ FQ + AW + + +L A V FFAA T+H K+ +F+EL ES L +S+ HL R A G S A++ R+CLA AALA+Q N +D++ + +L+ P Q+ + ++VLE M LPEE S R+ + + R AF L S+ LL+ L Q P + E V CL SWVR+ + A L LL A D +A L FETGVD LVE
Sbjct: 7 QIMAQFNSAMAVCFNPGGGVSPDERRQADEWLQHFQQTPAAWEICNGILVATPALSAEVCFFAANTLHNKVCYDFQELSPESQSQLHDSMSSHLMRHGLAPGASRALLKRLCLASAALAVQMNGRDILVT-APQLIDRAEPTQKIEVTKLVLELMGSLPEECNSRRINVSDDVRNAFQTSLDQSTQMLLTFLSQTVARPEVATSPDTLEAVLGCLGSWVRYSYITADALASQSLLTATLDLIASESLPESLFETGVDTLVE 266
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A317XS17_9BASI (ARM repeat-containing protein n=1 Tax=Testicularia cyperi TaxID=1882483 RepID=A0A317XS17_9BASI) HSP 1 Score: 133 bits (335), Expect = 5.910e-30 Identity = 92/272 (33.82%), Postives = 152/272 (55.88%), Query Frame = 1
Query: 277 RQTVLDVSAALNSVYNGSGRTHREA-DQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWSATGKSAVITRICLALAALALQ---ENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVS-HRVVI---LEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVDLLVE--SWCTEVEKSVEM 1062
+Q + V ALN++Y + A + WLQ FQ + +AW ++A+L L FAAQT KI + ++P+E+ P LR++L+ L+ ++A G + T++ LAL+ LALQ W V+ + R PE T V+LEF+ VLPEE ++ HR+ I + R FL L ++T +L +L V G + +Q +FQCL+SW++ ++ AQ++ +PLL +FDALA +LF+ D+L + + EVE+++++
Sbjct: 19 QQAIEAVMQALNTLYTDPNNDAKAAANVWLQNFQQTSEAWQTANALLLASELPLEPRLFAAQTFRTKITFDLEQVPRETRPSLRDTLLTALSGYAA-GPRVIQTQLSLALSGLALQMDESEWPTVVPAMIERF--GANPE----TVPVLLEFLTVLPEEVMTNHRIPIDNDFYSARSHFL--LSAAATDVLKALSMY-VQASGLTLQIQTGLFQCLRSWLKSGEISAQQMADTPLLNLSFDALASDQLFDVATDVLCDLINETQEVEENMDV 280
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A4P9XVK2_9FUNG (Armadillo-type protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XVK2_9FUNG) HSP 1 Score: 132 bits (332), Expect = 1.380e-29 Identity = 79/229 (34.50%), Postives = 131/229 (57.21%), Query Frame = 1
Query: 346 EADQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWSATGKSAVITRICLALAALALQ-ENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAV-SHRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVDLLVE 1026
+A++WL++FQ++ AW+++D +LR +A L FAAQT K+ + +L + LR+S++D +A++ + G + ++T++CLAL+ALA+Q W V+ + +L A P Q+A +LEF+ +LPEE +HR+ I + R+L + + + + G +Q VF+CL SW+R D+P E+ SPLL F A+ ELFE VDL+ E
Sbjct: 2 QANRWLEEFQNTVTAWNIADILLRDGTANLEARLFAAQTFRKKVTYDLHQLDTAARLSLRDSMLDLMAQFKS-GPAVLVTQLCLALSALAMQLPQWTGVVPQMM-KLFGADP-----QSATCLLEFLTILPEEVNGNHRIPITDDEFAERSRELLTDTASEVFHALLLYMQTSGTNTALQNRVFKCLLSWIRSGDIPIMEISNSPLLDMVFGAVQNDELFEVAVDLICE 223
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A0J0XSW1_9TREE (ARM repeat-containing protein n=1 Tax=Cutaneotrichosporon oleaginosum TaxID=879819 RepID=A0A0J0XSW1_9TREE) HSP 1 Score: 130 bits (327), Expect = 6.240e-29 Identity = 85/255 (33.33%), Postives = 136/255 (53.33%), Query Frame = 1
Query: 280 QTVLDVSAALNSVY-NGSGRTHREADQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARW----SATGKSAVITRICLALAALALQ-ENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVSHRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVDLLVE 1026
Q V AL ++Y N + ++A+ WLQ+FQHS AW +L ESA L F+AQT+ AKI + +LP++S+P LR+SL+ L + +G AV+T++ LALA LALQ W DV++ + ++ P T V+L F+ L EE+++ R+ + A + GS+ ++S L P G +Q +F+ +++W+R + P + SPL A FD L ELF+ VD++ +
Sbjct: 8 QATATVLEALQALYHNPDAQAKKQANDWLQEFQHSVDAWQTCHTLLVNESAPLEGRMFSAQTLRAKILYDLSQLPRDSLPPLRDSLLGALTPLVQPGAPSGSRAVLTQLALALADLALQMPEWTDVVQGMISQY--GNDPN----TVMVLLRFLSSLAEESLNPRLPPQQDNSTAVDALVSGSAEQVISILSMYIQAP-GITAPIQVAIFETMRAWLRAGEFPVMAVAHSPLFPAMFDGLESDELFDAAVDVICD 255
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A1E3QAH2_LIPST (Importin N-terminal domain-containing protein n=1 Tax=Lipomyces starkeyi NRRL Y-11557 TaxID=675824 RepID=A0A1E3QAH2_LIPST) HSP 1 Score: 129 bits (324), Expect = 1.550e-28 Identity = 85/266 (31.95%), Postives = 144/266 (54.14%), Query Frame = 1
Query: 304 ALNSVYNGSGR-THREADQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWSATGKSAVITRICLALAALALQ-ENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVS-HRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVD----LLVESWCTEVEKSVEMRLYSKI 1080
ALN++Y GS R T +A Q+L++FQ S+ AW++S +L + + FAAQT+ +K+ + +LP + LR+SL+ L ++A G ++T++CLALA LA+Q W+ ++D+ +A +VLEF+KVLPEEA ++ + E + R+L ++ + ++ V +F+CL SW+R +VP + +V SPLL F AL+ +LF+ D ++ E+ + E + LYSK+
Sbjct: 14 ALNALYTGSNRQTKEQAGQFLEQFQKSQGAWTISHTILSSPTLPIESKLFAAQTLRSKVIYDLHQLPADGQLQLRSSLITLLGTYTA-GPKIILTQLCLALANLAIQLVQWKSALEDVIRACGNDAA------SAPIVLEFLKVLPEEASDVKKIPLSEDELKERTRELLENNAMQVLNILVAYVTSANTPQSSHALIFECLNSWLR--EVPLETIVNSPLLNIVFQALSNEDLFDAATDCVCSMIRETRDLDDESDIVSTLYSKV 270
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A6U3U8S3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U8S3_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.180e-28 Identity = 86/248 (34.68%), Postives = 133/248 (53.63%), Query Frame = 1
Query: 340 HRE-ADQWLQKFQHSEKAWSVSDAMLRMESAELNVT------------FFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHL---ARWSATGKSAVITRICLALAALALQENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVSHRVVIL-EATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAK--RELFETGVDLLVE 1026
HR+ AD +L +FQ AW V D +L + + N T FFAAQT+H+K R +LP +++P LR+SL+ H A S G+ A++TR+ +A+ AL++Q NW +I D+ L+ P + AR +LE K+LPEE S R+V+ E+ R F L ++ + + A+ + QE V QCLQSW+R+V + SPLL F +L+ +L+E VD+++E
Sbjct: 67 HRDKADAFLTQFQRLPVAWVVCDRLLALPTNGANSTDANAAMTLTQRRFFAAQTLHSKCRTEIHQLPPDTLPSLRDSLLQHFSNCALLSTGGEKALVTRLGMAVCALSVQMNWTSIIPDVMNNLLVPRP-----ELARAILELFKLLPEECSSDRLVLADESLRNQFHDMLRDQASHIWNFCSS-ALKENNVSLQTQENVLQCLQSWLRYVPANPAMIESSPLLPWIFHSLSNSNNDLYELAVDVVIE 308
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Match: A0A8H3YJW2_9TREE (Importin N-terminal domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3YJW2_9TREE) HSP 1 Score: 123 bits (308), Expect = 1.780e-26 Identity = 79/263 (30.04%), Postives = 136/263 (51.71%), Query Frame = 1
Query: 253 IMDTDAALRQTVLDVSAALNSVYNGSGRTHREADQWLQKFQHSEKAWSVSDAMLRMESAELNVTFFAAQTIHAKIRLNFRELPKESIPMLRNSLVDHLARWSAT----GKSAVITRICLALAALALQ-ENWQDVIKDLSARLMQAGPPEQQNQTARVVLEFMKVLPEEAVSHRVVILEATREAFLRQLCGSSTFLLSSLQQIAVGPLGAEVMVQETVFQCLQSWVRHVDVPAQELVRSPLLQAAFDALAKRELFETGVDLLVE 1026
I D A + T+L + A ++ + + A++WL +FQH+ +AW +L A AAQT+ +K+ + +LP+ES+ LR+SL+ L+ ++ T G A+ T++CLALA LA Q W+DVI + ++ ++LEF+KVL EEA + R+ + A +L + L ++ + G VQ VF L++W++ ++ A + ++ L Q +FDALA ELF+ VD++ +
Sbjct: 6 IASVDQATQTTLLAIQALF---HDPDAQAKKRANEWLSEFQHTSEAWQTCHTLLTAPEAPQEARMVAAQTLRSKVVYDLAQLPRESVLPLRDSLLQSLSHFTNTAAPAGSRAITTQLCLALADLAYQLPEWKDVIAGMVDSFGSRV------ESVEMLLEFLKVLVEEAGNSRIPLSSAEAAERSSELLSDQRDKVLGLLEMYLSAQGVTPRVQTAVFDTLRAWLQAGEIDAGMIAQTRLFQFSFDALANIELFDAAVDVICD 259 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig284.7747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig284.7747.1 >prot_H-paniculata_contig284.7747.1 ID=prot_H-paniculata_contig284.7747.1|Name=mRNA_H-paniculata_contig284.7747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp MDTDAALRQTVLDVSAALNSVYNGSGRTHREADQWLQKFQHSEKAWSVSDback to top mRNA from alignment at H-paniculata_contig284:10635..23749- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig284.7747.1 ID=mRNA_H-paniculata_contig284.7747.1|Name=mRNA_H-paniculata_contig284.7747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13115bp|location=Sequence derived from alignment at H-paniculata_contig284:10635..23749- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig284:10635..23749- >mRNA_H-paniculata_contig284.7747.1 ID=mRNA_H-paniculata_contig284.7747.1|Name=mRNA_H-paniculata_contig284.7747.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1692bp|location=Sequence derived from alignment at H-paniculata_contig284:10635..23749- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |