mRNA_H-paniculata_contig27906.7626.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: A0A6H5L7N0_9PHAE (VHS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7N0_9PHAE) HSP 1 Score: 162 bits (411), Expect = 1.030e-47 Identity = 77/99 (77.78%), Postives = 89/99 (89.90%), Query Frame = 1
Query: 1 INTRTDGPNHAAKALKRRLKGDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYEVSSQALALIQEWGIAFQSDRSLAYAETYGR 297
IN + DGP+HAAKALKRRLK DNPK+L+L+LTLCE +KNC R LH+ALG+REFLAEVAGL NGQ+GYEV S+AL LIQ+WGIAFQSDRSLAY+ETYGR
Sbjct: 45 INHQGDGPSHAAKALKRRLKSDNPKILELTLTLCETTMKNCSRPLHRALGAREFLAEVAGLCNGQKGYEVRSRALGLIQDWGIAFQSDRSLAYSETYGR 143
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: D7G5B8_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B8_ECTSI) HSP 1 Score: 161 bits (407), Expect = 5.510e-45 Identity = 77/99 (77.78%), Postives = 88/99 (88.89%), Query Frame = 1
Query: 1 INTRTDGPNHAAKALKRRLKGDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYEVSSQALALIQEWGIAFQSDRSLAYAETYGR 297
IN + DGP+HAAKALKRRLK DNPK+L L+LTLCE +KNC R LH+ALG+REFLAEVAGL NGQ+GYEV S+AL LIQ+WGIAFQSDRSLAY+ETYGR
Sbjct: 45 INHQGDGPSHAAKALKRRLKSDNPKILGLTLTLCETTMKNCSRPLHRALGAREFLAEVAGLCNGQKGYEVRSRALGLIQDWGIAFQSDRSLAYSETYGR 143
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: A0A835Z2K5_9STRA (VHS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2K5_9STRA) HSP 1 Score: 102 bits (255), Expect = 9.140e-23 Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = 1
Query: 1 INTRTDGPNHAAKALKRRLKGDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYEVSSQALALIQEWGIAFQSDRSLAYAETYGR 297
I+ +GP +AAKAL+RRLK +N KV+ L+LTLC+ +KNC LH ALG+REFL V +A G+ G +V QAL L+Q+WG AF L Y+ Y R
Sbjct: 74 IDATVEGPQNAAKALQRRLKSENAKVVSLTLTLCDVCVKNCRPPLHAALGTREFLGHVEDVAGGRLGPQVQQQALELVQQWGEAFAGSPHLYYSSLYTR 172
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: A0A4D9D0H1_9STRA (VHS domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0H1_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.090e-19 Identity = 47/93 (50.54%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 31 AAKALKRRLKGDNPKVLQLSLTLCEAVIKNCDR-----QLHQALGSREFLAEVAGLANGQRGYEVSSQALALIQEWGIAFQSDR-SLAYAETY 291
A +A +R+L+ NPKVLQL+LTL E VIKN D+ + H +GS +FLA+++ L +G+RG+EV QALAL+Q+WG++F+S R +LA+ TY
Sbjct: 58 AMRAFRRKLREANPKVLQLTLTLLETVIKNADQPGRESRFHALVGSPDFLAKISSLTDGKRGWEVKEQALALLQQWGLSFESRRDTLAFYSTY 150
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: F0YK31_AURAN (VHS domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK31_AURAN) HSP 1 Score: 82.0 bits (201), Expect = 1.330e-15 Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 34 AKALKRRLKGDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYEVSSQALALIQEWGIAFQSDRSL-AYAETY 291
A A+K+RL ++ V LSLTL E +KNC +H A+G ++ L+E+A L G G EV QALAL+Q+WG+AF+S +L A+A+TY
Sbjct: 40 AFAVKKRLGKNDAHVTALSLTLLEMCVKNCGEAVHAAVGQQQILSEIAKLCEGGSGEEVKRQALALVQQWGVAFESRDALPAFADTY 126
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: A0A7S0Z2N1_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0Z2N1_9CRYP) HSP 1 Score: 68.2 bits (165), Expect = 1.850e-10 Identity = 35/95 (36.84%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 16 DGPNHAAKALKRRLKGDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLA-NGQRGYEVSSQALALIQEWGIAFQ--SDRSLAYAETY 291
+G AA+AL+R+LK N +VL L++T+ E V++NC +LH ++ ++EF+ +V+GL N + + + LIQ WG F+ D+ A+ +TY
Sbjct: 52 EGSRDAARALRRKLKAKNGRVLLLAVTVLEQVMQNCGPELHASIATKEFMGDVSGLVLNPNLDASLHRKTVQLIQHWGEGFRHMQDKLPAFYDTY 146
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: A0A8J9VDT9_9NEOP ((lesser marbled fritillary) hypothetical protein n=1 Tax=Brenthis ino TaxID=405034 RepID=A0A8J9VDT9_9NEOP) HSP 1 Score: 63.2 bits (152), Expect = 9.970e-9 Identity = 36/96 (37.50%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 1 INTRTDGPNHAAKALKRRLK---GDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYE--VSSQALALIQEWGIAFQSDRSL 273
INT TDGP A KA+++RL G N V+ +LT+ E +KNC + H + ++EF+ E+ L + V + L+LIQ W AFQ+ L
Sbjct: 41 INTTTDGPKDAVKAIRKRLTQSAGKNYTVVMYTLTVLETCVKNCGKSFHMLVCNKEFITELVKLIGPKNDPPTVVQEKVLSLIQCWADAFQNQPEL 136
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: UPI001E688CCE (TOM1-like protein 2 isoform X1 n=5 Tax=Satyrini TaxID=127320 RepID=UPI001E688CCE) HSP 1 Score: 62.4 bits (150), Expect = 1.850e-8 Identity = 36/96 (37.50%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 1 INTRTDGPNHAAKALKRRLK---GDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYE--VSSQALALIQEWGIAFQSDRSL 273
IN+ TDGP A KA+++RL G N V+ +LT+ E +KNC + H + S+EF++E+ L + V + L+LIQ W AFQ+ L
Sbjct: 41 INSSTDGPKDAVKAIRKRLTQSAGKNYTVVMYTLTVLETCVKNCGKSFHVLVCSKEFISELVKLIGPKNDPPTVVQEKVLSLIQCWADAFQNQPEL 136
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: A0A6J1NAT0_BICAN (TOM1-like protein 2 n=2 Tax=Obtectomera TaxID=104431 RepID=A0A6J1NAT0_BICAN) HSP 1 Score: 60.8 bits (146), Expect = 2.050e-8 Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 1 INTRTDGPNHAAKALKRRLK---GDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYE--VSSQALALIQEWGIAFQSDRSL 273
IN+ TDGP A KA+++RL G N ++ +LT+ E +KNC + H + S+EF+ E+ L + V + L+LIQ W AFQ+ L
Sbjct: 41 INSSTDGPKDAVKAIRKRLTQSAGKNYTIVMYTLTVLETCVKNCGKSFHVLVCSKEFIYELVKLIGPKNDPPTVVQEKVLSLIQCWADAFQNQPEL 136
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Match: H9JQ35_BOMMO (VHS domain-containing protein n=1 Tax=Bombyx mori TaxID=7091 RepID=H9JQ35_BOMMO) HSP 1 Score: 60.8 bits (146), Expect = 2.500e-8 Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 1 INTRTDGPNHAAKALKRRLK---GDNPKVLQLSLTLCEAVIKNCDRQLHQALGSREFLAEVAGLANGQRGYE--VSSQALALIQEWGIAFQSDRSL 273
IN+ TDGP A KA+++RL G N V+ +LT+ E +KNC + H + ++EF++E+ L + V + L+LIQ W AFQ+ L
Sbjct: 7 INSSTDGPKDAIKAIRKRLTTSAGKNYTVVMYTLTVLETCVKNCGKPFHVLVCNKEFISELVKLIGPKNDPPTVVQDKVLSLIQCWADAFQNQAEL 102 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27906.7626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27906.7626.1 >prot_H-paniculata_contig27906.7626.1 ID=prot_H-paniculata_contig27906.7626.1|Name=mRNA_H-paniculata_contig27906.7626.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp INTRTDGPNHAAKALKRRLKGDNPKVLQLSLTLCEAVIKNCDRQLHQALGback to top mRNA from alignment at H-paniculata_contig27906:1436..3164+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27906.7626.1 ID=mRNA_H-paniculata_contig27906.7626.1|Name=mRNA_H-paniculata_contig27906.7626.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1729bp|location=Sequence derived from alignment at H-paniculata_contig27906:1436..3164+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27906:1436..3164+ >mRNA_H-paniculata_contig27906.7626.1 ID=mRNA_H-paniculata_contig27906.7626.1|Name=mRNA_H-paniculata_contig27906.7626.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig27906:1436..3164+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |