mRNA_H-paniculata_contig275.7526.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A6H5JZG8_9PHAE (Hflx-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZG8_9PHAE) HSP 1 Score: 280 bits (716), Expect = 3.230e-87 Identity = 192/384 (50.00%), Postives = 236/384 (61.46%), Query Frame = 1
Query: 4 VELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGG---KGGGGSGXXXXRSGGVRGK---GA---------VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEVPTLVVWNKVDKEQDCEK-----------------------GEEEVDDSSSNISCMGEDSSISGESSDGTMRRRSAPDARR--HDTGAAAADAADNGDDTIRVSAATGDGLKGLLGRVDALLHLRGNA-------RLTPPPYERFRYVQTLPGQ 1014
VELA LKY+AAHLV+ G SG+DRQGGG G MGG+GEKA++ QR+ LR+RTAEV + L +VE+RR QR +RDRR E +VALVGYTNVGKSSL+N+L+LG +G GG G G RG+ GA V +++RVFDTLDPT RS+TLPS RCVLVDTVGFIQDLPT L+HSF++TL+EVK ADVLLHVRDAS P+V EA R AV+ETL ELGA PTL VWNKVDKE+ + + + D + G + G + +G R A + R D GA IRVSAA+G GL LL R+DA+LHL G A R + P +R+ YV+ LPGQ
Sbjct: 133 VELAMLKYKAAHLVK----GSGSGFDRQGGGIGTMGGSGEKAIDTQRQLLRNRTAEVHRQLKDVERRRGFQRSSRDRRLEASVALVGYTNVGKSSLMNQLALGRHNTRGVGGGGGNREGKGSERGRRFDGAXXXXXXXXMVQARNRVFDTLDPTVRSVTLPSRVRCVLVDTVGFIQDLPTDLVHSFKSTLEEVKSADVLLHVRDASVEPRVGEAHRKAVQETLAELGAGGRPTLEVWNKVDKERRVDPENRGAXXXXXXXXXXXXXXXXXXXDMSLPDEAKAEKANGR---MEGPAGEGGSRLSHAGEGRTGPDDEGA------------IRVSAASGQGLAHLLERIDAMLHLNGGADGEGSGRRFSIKPIDRYEYVRVLPGQ 497
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A177W1F2_9GAMM (GTPase HflX n=8 Tax=Piscirickettsiaceae TaxID=135616 RepID=A0A177W1F2_9GAMM) HSP 1 Score: 166 bits (419), Expect = 5.050e-44 Identity = 101/227 (44.49%), Postives = 132/227 (58.15%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEVPTLVVWNKVD 681
QVEL QL++QA LVQ + YD+Q GG G GGAGE LE+ RR LR R + K L + RA+ R+ R R ++PT+ALVGYTN GKS+L N LS + ++ DR+F TLDPT R +P VL DTVGFIQ LP LI +FRATL+E +AD+LLHV D +S + ++ V E L E+GA +P ++V+NKVD
Sbjct: 124 QVELTQLQHQATRLVQ-----KSGHYDQQRGGIGVRGGAGETGLEVDRRVLRQRITTLKKRLVHIRDSRALGRQRRQRSQQPTIALVGYTNAGKSTLFNALS---------------------DSSAYADDRLFATLDPTLRRAVIPGFGDVVLADTVGFIQHLPPQLIDAFRATLEETAQADLLLHVIDGASEESLLRIEQ--VNEVLAEIGAEHIPQILVFNKVD 322
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI001C4A161E (GTPase HflX n=1 Tax=Sphingomicrobium sp. B8 TaxID=2851013 RepID=UPI001C4A161E) HSP 1 Score: 166 bits (419), Expect = 5.260e-44 Identity = 106/230 (46.09%), Postives = 138/230 (60.00%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGAS---EVPTLVVWNKVD 681
QVELA L YQA LV++ + +RQ GG G +GG GE +E RR +RDR A++ K L +V+K RA+ R R R P VALVGYTN GKS+L NRL+ + V ++D +F TLDPT R I +P + +L DTVGF+ DLPT L+ +FRATL+EV AD++LHVRD + + SEAQR VE+ L+ELG P L VWNK+D
Sbjct: 132 QVELAHLDYQAGRLVRTW-----THLERQRGGFGFLGGPGETQIEADRRMIRDRMAKIRKELEQVKKTRALHRERRQRAPWPVVALVGYTNAGKSTLFNRLA---------------------RAEVMAKDLLFATLDPTMRQIRVPGHDKVILSDTVGFVSDLPTQLVAAFRATLEEVASADLILHVRDIAH--EDSEAQRADVEQVLKELGLEGEGAPPQLEVWNKLD 333
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A7T2GLS4_9SPHN (GTPase HflX n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A7T2GLS4_9SPHN) HSP 1 Score: 165 bits (417), Expect = 1.110e-43 Identity = 109/244 (44.67%), Postives = 143/244 (58.61%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASE---VPTLVVWNKVDK--EQDCEKGEEEV 717
QVELA L YQA LV+S + +RQ GG G +GG GE +E RRQ+RDR A++ K L +V + R + R R R P +ALVGYTN GKS+L NRL+ + V +++ +F TLDPT R I LP + + +L DTVGFI DLPT L+ +FRATL+EV AD+++HVRD S SEAQR VE+ L E+GA+ P L WNK+D EQ+ + EE
Sbjct: 133 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRQIRDRMAKLRKELEQVTRTRTLHRARRQRAPWPIIALVGYTNAGKSTLFNRLT---------------------RADVMAENLLFATLDPTMREIGLPGIDKTILSDTVGFISDLPTQLVAAFRATLEEVISADLIIHVRDISHPD--SEAQRQDVEDVLEEIGAAGEEGAPILEAWNKIDSLDEQEASRVREEA 348
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI0015A40394 (GTPase HflX n=1 Tax=Parasphingopyxis sp. CP4 TaxID=2724527 RepID=UPI0015A40394) HSP 1 Score: 164 bits (416), Expect = 1.590e-43 Identity = 102/230 (44.35%), Postives = 137/230 (59.57%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGAS---EVPTLVVWNKVD 681
QVELA L YQA LV+S + +RQ GG G +GG GE +E RR +RDR A++ K L +V + R + R R + P +ALVGYTN GKS+L N+++ G V + D +F TLDPT R I LP L + +L DTVGF+ DLPT L+ +FRATL+EV AD+++HVRD + S+AQRL VE+ L E+GA +VP + WNK+D
Sbjct: 133 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRMIRDRMAKLRKELEQVRRTRTLHRSRRQKAPWPVIALVGYTNAGKSTLFNQMT---------------------GGDVMAADLLFATLDPTMREIALPGLDKAILSDTVGFVSDLPTQLVAAFRATLEEVNAADLIVHVRDIAHPD--SDAQRLDVEQVLAEIGAGGEGDVPMIEAWNKID 334
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: R5AP53_9CLOT (GTPase HflX n=1 Tax=Clostridium sp. CAG:1024 TaxID=1262770 RepID=R5AP53_9CLOT) HSP 1 Score: 161 bits (408), Expect = 2.580e-43 Identity = 107/229 (46.72%), Postives = 139/229 (60.70%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGA-VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEVPTLVVWNKVDK 684
QVELAQLKY+ L+ G A RQGG M G GEK LEI RR++R R E+ + L E+EK+RA++R R + P VALVGYTN GKS+LLN LS GA V ++D++F TLDP R ITLP+ C+L DTVGFI LP L+ +FR+TL+EV+ AD+LLHV D+SS + Q VEE + LGA++ P + V+NK+DK
Sbjct: 46 QVELAQLKYRLPRLLGMGRA-----LSRQGGSGVGMRGPGEKKLEIDRRRIRRRIFELQQELDEIEKQRALRRVKRGKNAVPVVALVGYTNAGKSTLLNALS----------------------GANVLAEDQLFATLDPVVRRITLPNGTECLLSDTVGFINKLPHDLVQAFRSTLEEVRDADLLLHVIDSSSP--YYDVQMRVVEEVVSSLGAADTPCIQVFNKIDK 245
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A520JCT0_SPHSX (GTPase HflX (Fragment) n=1 Tax=Sphingomonas sp. TaxID=28214 RepID=A0A520JCT0_SPHSX) HSP 1 Score: 161 bits (408), Expect = 3.050e-43 Identity = 106/238 (44.54%), Postives = 139/238 (58.40%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGA-VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEV-PTLVVWNKVDKEQDCEKGE 708
QVELA L YQA LV+S + +RQ GG G +GG GE +E RR +RDR A++ K L +V + R + R R R P +ALVGYTN GKS+L NRL+ GA V ++D +F TLDPT R I LP + + +L DTVGF+ DLPT L+ +F+ATL+EV AD+L+HVRD + +EAQR VE L E+G E P VWNK+D D ++ E
Sbjct: 44 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRLIRDRMAKLKKELEQVSRTRGLHRERRQRAPWPVIALVGYTNAGKSTLFNRLT----------------------GADVMAEDLLFATLDPTLRQIQLPGIDKAILSDTVGFVSDLPTQLVAAFKATLEEVVSADLLVHVRDIAHPD--TEAQRADVEAVLAEIGVDETTPRFEVWNKLDLLDDADREE 252
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: A0A127MEW1_9SPHN (GTPase HflX n=5 Tax=Sphingomonadales TaxID=204457 RepID=A0A127MEW1_9SPHN) HSP 1 Score: 163 bits (413), Expect = 4.080e-43 Identity = 106/234 (45.30%), Postives = 136/234 (58.12%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGA-VHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASEV-----PTLVVWNKVDK 684
QVELA L YQA LV+S + +RQ GG G +GG GE +E RR +RDR A++ K LA + K RA+ R R R P +ALVGYTN GKS+L NRL+ GA V ++D +F TLDPT R LP + +L DTVGF+ DLPT L+ +FRATL+EV AD+++HVRD S + S+AQ V + L ELG SE P + WNK+DK
Sbjct: 131 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIESDRRMIRDRMAKLRKDLAHLRKTRALHRERRQRAPWPVIALVGYTNAGKSTLFNRLT----------------------GADVFAEDLLFATLDPTMREFPLPGYDKAILSDTVGFVSDLPTQLVAAFRATLEEVSAADIVVHVRDISH--EASDAQARDVRQILAELGVSEEAGEGPPVIEAWNKIDK 335
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI00101B9E8A (GTPase HflX n=1 Tax=Sphingosinicella sp. CPCC 101087 TaxID=2497754 RepID=UPI00101B9E8A) HSP 1 Score: 163 bits (413), Expect = 4.330e-43 Identity = 105/231 (45.45%), Postives = 138/231 (59.74%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASE---VPTLVVWNKVDK 684
QVELA L YQA LV+S + +RQ GG G +GG GE +E RR +RDR A++ + L +V + RA+ R R R P VALVGYTN GKS+L NRL+ + V ++D +F TLDPT R I LP L + +L DTVGFI DLPT L+ +FRATL+EV AD+++HVRD S SEAQ+ VE+ L E+GA+ P + WNK+D+
Sbjct: 132 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRLIRDRMAKLRRELEQVSRTRALHRSRRQRAPWPVVALVGYTNAGKSTLFNRLT---------------------RAEVLAEDLLFATLDPTMREIGLPGLDKAILSDTVGFISDLPTQLVAAFRATLEEVVSADLIVHVRDISHPD--SEAQQGDVEQVLEEIGAAGEIGAPMIEAWNKIDR 334
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Match: UPI001FD65D84 (GTPase HflX n=1 Tax=Sphingomicrobium aestuariivivum TaxID=1582356 RepID=UPI001FD65D84) HSP 1 Score: 163 bits (412), Expect = 5.370e-43 Identity = 107/230 (46.52%), Postives = 134/230 (58.26%), Query Frame = 1
Query: 1 QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQLRDRTAEVGKLLAEVEKRRAVQRRTRDRRREPTVALVGYTNVGKSSLLNRLSLGGKGGGGSGXXXXRSGGVRGKGAVHSQDRVFDTLDPTSRSITLPSLARCVLVDTVGFIQDLPTALIHSFRATLDEVKRADVLLHVRDASSTPQVSEAQRLAVEETLRELGASE---VPTLVVWNKVD 681
QVELA L YQA LV+S + +RQ GG G +GG GE +E RR +RDR A + K L +V+K R + R R R P VALVGYTN GKS+L NRL+ + +V ++D +F TLDPT RS+ LP + +L DTVGF+ DLPT L+ +FRATL+EV AD++LHVRD S +EAQ VE L ELG E P L VWNK D
Sbjct: 132 QVELAHLDYQAGRLVRSW-----THLERQRGGFGFLGGPGETQIEADRRMIRDRMARIRKELEQVKKTRGLHRDRRQRAPWPVVALVGYTNAGKSTLFNRLT---------------------EASVMAKDLLFATLDPTMRSVKLPGHEKVILSDTVGFVSDLPTQLVAAFRATLEEVASADLILHVRDISHPD--TEAQAEDVEGVLAELGLEEGKGPPRLEVWNKAD 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig275.7526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig275.7526.1 >prot_H-paniculata_contig275.7526.1 ID=prot_H-paniculata_contig275.7526.1|Name=mRNA_H-paniculata_contig275.7526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=340bp QVELAQLKYQAAHLVQSGAAGRDSGYDRQGGGTGAMGGAGEKALEIQRRQback to top mRNA from alignment at H-paniculata_contig275:41404..42987- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig275.7526.1 ID=mRNA_H-paniculata_contig275.7526.1|Name=mRNA_H-paniculata_contig275.7526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig275:41404..42987- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig275:41404..42987- >mRNA_H-paniculata_contig275.7526.1 ID=mRNA_H-paniculata_contig275.7526.1|Name=mRNA_H-paniculata_contig275.7526.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2040bp|location=Sequence derived from alignment at H-paniculata_contig275:41404..42987- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |