mRNA_H-paniculata_contig2744.7510.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 155 bits (392), Expect = 1.040e-42 Identity = 74/188 (39.36%), Postives = 118/188 (62.77%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSLKTQGRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISRDRRKFKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
+P G+ + + +GV +KYP +LW RV Q++ + L + R GR S TP K A ++ +N+ NR+ TL ++S +L ++GL G + RW +GA + RI PSLS K++R+DF +++ ++ N +H+D+SWFYL+R+KEKVR+F GE+ G +V H+SH+PK+M I A +RP
Sbjct: 16 IPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARP 203
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: F0WV30_9STRA (Transposase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WV30_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.580e-10 Identity = 58/199 (29.15%), Postives = 94/199 (47.24%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLE---------EGNAVSLKTQGRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISRDRR--KFKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
L G + ++++ VN ++W R Q EGNA ++ GR G S ++ ++ + +R L LSA LA + ST L R++K + P+LS RV F + I+ R F + +H+D+ WF++ + K +V + P E + +HKSHIPK+MF+CAV+RP
Sbjct: 68 LQHGALKEASEKWNVNVHTVYRVWKRYCSQRADSATRGITFEGNACNI---GRKGVSEEYIKDLHERISKLKLEHRD-DLRSLSAALA-----IPSTTLQRYVKSKVLRVHTVTLKPTLSEDQNAERVRFISSFITLIPRGATFSPMYDRVHLDEKWFFMKKTKRRVYLTPTEP-TPYLHTRHKSHIPKIMFLCAVARP 256
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: UPI001C2659A6 (uncharacterized protein LOC121754350 n=3 Tax=Salvia splendens TaxID=180675 RepID=UPI001C2659A6) HSP 1 Score: 67.0 bits (162), Expect = 1.090e-9 Identity = 49/191 (25.65%), Postives = 88/191 (46.07%), Query Frame = 1
Query: 4 PAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSLKTQGRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISRDRR----KFKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
P G + +F + + + W KQ +G + L +Q ++ + + + + + ++ T + LS A L T + RW++ I P+L+ H R+ F L + DR F+ +NTIH+D+ WFY+ + ++ + PGE + ++K I K+MF+CAVSRP
Sbjct: 28 PRGTLKEAQLKFKICRQTTTRYWNAAKKQQAKGEVIQLVSQRKMRK---YPKKIVLDIELLKTIHFTKRSNLLSLSNA---LKCSKTTVWRWVQAGLIRPHTSAIKPNLTADHMLLRLRFTLQSLELDRILNRIMFRNMDNTIHIDEKWFYITQGSQRFYLAPGEAEPHRT-CKNKKFISKIMFMCAVSRP 211
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A418BUJ8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BUJ8_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.450e-8 Identity = 50/194 (25.77%), Postives = 89/194 (45.88%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSLKTQ----GRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISR--DRRKFKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
LP G+ + K FG ++W R L + Q G+ GR +T + I A+ ++ S A L + + L + K + + P+L+ +K R+++A+ ++ + F N+T+HVD+ WF++ R ++KV PGE K+ + K H+ K+MF+ AV+RP
Sbjct: 75 LPKGVADDIGKLFGCTPTTVRRIWRRAAADLSGNKTICATVQQRKKGQSGRKRMYTDIPER----IQAIPQSRRYCFRSIAHA---LNIPKSTLHVYFKRGVIAKYSSVLKPALTESNKVCRLNWAIKHVTDIDGAKYFDPMNDTVHVDEKWFFMTRLQKKVYGAPGE-KIKQRSCKSKRHLLKVMFLSAVARP 260
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A418D578_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418D578_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.680e-8 Identity = 50/194 (25.77%), Postives = 89/194 (45.88%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSLKTQ----GRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISR--DRRKFKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
LP G+ + K FG ++W R L + Q G+ GR +T + I A+ ++ S A L + + L + K + + P+L+ +K R+++A+ ++ + F N+T+HVD+ WF++ R ++KV PGE K+ + K H+ K+MF+ AV+RP
Sbjct: 32 LPKGVADDIGKLFGCTPTTVRRIWRRAAADLSGNKTICATVQQRKKGQSGRKRMYTDIPER----IQAIPQSRRYCFRSIAHA---LNIPKSTLHVYFKRGVIAKYSSVLKPALTESNKVCRLNWAIKHVTDIDGAKYFDPMNDTVHVDEKWFFMTRLQKKVYGAPGE-KIKQRSCKSKRHLLKVMFLSAVARP 217
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A418EJV4_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EJV4_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.990e-8 Identity = 50/194 (25.77%), Postives = 89/194 (45.88%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSLKTQ----GRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISR--DRRKFKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
LP G+ + K FG ++W R L + Q G+ GR +T + I A+ ++ S A L + + L + K + + P+L+ +K R+++A+ ++ + F N+T+HVD+ WF++ R ++KV PGE K+ + K H+ K+MF+ AV+RP
Sbjct: 32 LPKGVADDIGKLFGCTPTTVRRIWRRAAADLSGNKTICATVQQRKKGQSGRKRMYTDIPER----IQAIPQSRRYCFRSIAHA---LNIPKSTLHVYFKRGVIAKYSSVLKPALTESNKVCRLNWAIKHVTDIDGAKYFDPMNDTVHVDEKWFFMTRLQKKVYGAPGE-KIKQRSCKSKRHLLKVMFLSAVARP 217
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A484N8H9_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N8H9_9ASTE) HSP 1 Score: 60.8 bits (146), Expect = 1.470e-7 Identity = 52/194 (26.80%), Postives = 77/194 (39.69%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSL--KTQGRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISRD----RRKFKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
L G ++A EF ++ K G LW Q++ G V++ K +G G DI + + + + V + + RWLK R I P L K + + L I F + IH+D+ WF + ++K P E Q KSHIPK+MF+ AVSRP
Sbjct: 73 LQRGCIQEVAAEFNISRKTVGSLWSIAKTQMQAGLPVNVICKWKGNSGPIMGTV--------DIQKMLVVPFHKRKNIRALAYAMDVSKSTVQRWLKCKKIRRHSNAIKPFLCEKGKLKILKYCLEHIVAPSIPMNPTFHHFYDYIHIDEKWFNITKEKTTFYALPDEPDPYRT-AQSKSHIPKIMFLAAVSRP 257
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A397CBJ2_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CBJ2_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 2.000e-7 Identity = 50/194 (25.77%), Postives = 91/194 (46.91%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSL----KTQGRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATRVQRRITPSLSFHHKKNRVDFALNQISR-DRRK-FKIGNNTIHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
LP G+ + K F ++W R L + + +G+ GR +T + I A+ ++ S A L + + L + K + + PSL+ +K R+++A+ ++ DR K F N+T+HVD+ WF++ R ++K+ PGE K+ + K H+ K++F+ AV+RP
Sbjct: 32 LPKGVAEDMGKLFDCTPTTVRRIWRRASVDLSGSKTICATVHQRKKGQSGRKRMYTDIPER----IQAIPQSRRNCFRSIAYA---LNIPKSTLHVYFKRGVIAKYSSVLKPSLTESNKVCRLNWAIKHVTDIDRAKYFDPMNDTVHVDEKWFFITRLQKKIYGAPGE-KIKQRSCKSKRHLLKVIFLSAVARP 217
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 1.070e-5 Identity = 22/49 (44.90%), Postives = 33/49 (67.35%), Query Frame = 1
Query: 418 IHVDDSWFYLIRDKEKVRMFPGEEKVGSIKVQHKSHIPKLMFICAVSRP 564
+H+D+ WF + + K +V + P E QHKSH+PKLMF+CA++RP
Sbjct: 28 VHIDEKWFVVNKTKRRVYLTPTEPNPQR-HAQHKSHLPKLMFLCAITRP 75
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Match: A0A6A4EVK9_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EVK9_9STRA) HSP 1 Score: 53.9 bits (128), Expect = 3.400e-5 Identity = 49/197 (24.87%), Postives = 91/197 (46.19%), Query Frame = 1
Query: 1 LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSLKTQGRVGRSSDFTPRKQAKVRDINAVNRTLTLDELSAKLAEVGLTVGSTKLSRWLKLMGATR-VQRRITPSLSFHHKKNRVDFALNQISRDRR---KFKIGNNTIHVDDSWFYLIRDKEKVRMFPG--EEKVGSIKVQH---KSHIPKLMFICAVSRP 564
L G +++A +FG++ ++W R + E A +K R S +K+ + + D + + + T+ + L + L+ G R R P L+ H+ R+ + ++ + + + F ++T+HVD+ WF+L + +KV + G E VQ+ K HI K+MF+CAV+RP
Sbjct: 25 LEHGGMTEIAGDFGISRDVGSRIWKRGCSTMGERVAAVVKP-----RWSQCGRKKKDRAELCKLIREIPIRDRCNYRTIQAR-TILTPYLIKQLQEEGFMRHALTRTEPLLTEKHRHERLKWCVSHVRQMQDGGCSFVTMDDTVHVDEKWFFLKKVGQKVYILTGLDGEPCEEAPVQYLRSKRHIVKVMFLCAVARP 215 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2744.7510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2744.7510.1 >prot_H-paniculata_contig2744.7510.1 ID=prot_H-paniculata_contig2744.7510.1|Name=mRNA_H-paniculata_contig2744.7510.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=188bp LPAGIGSKLAKEFGVNEKYPGKLWGRVVKQLEEGNAVSLKTQGRVGRSSDback to top mRNA from alignment at H-paniculata_contig2744:11544..12107- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2744.7510.1 ID=mRNA_H-paniculata_contig2744.7510.1|Name=mRNA_H-paniculata_contig2744.7510.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=564bp|location=Sequence derived from alignment at H-paniculata_contig2744:11544..12107- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2744:11544..12107- >mRNA_H-paniculata_contig2744.7510.1 ID=mRNA_H-paniculata_contig2744.7510.1|Name=mRNA_H-paniculata_contig2744.7510.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1128bp|location=Sequence derived from alignment at H-paniculata_contig2744:11544..12107- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |