mRNA_H-paniculata_contig274.7498.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A6H5JQN2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQN2_9PHAE) HSP 1 Score: 988 bits (2554), Expect = 0.000e+0 Identity = 824/1925 (42.81%), Postives = 988/1925 (51.32%), Query Frame = 1
Query: 118 MDAAVWEKVIGDLDSKDTKRRVRGLEALDEKFRLAPP----------------GDGQWSPLVTPLLGTLRDNNFKVCKAALRCLEALVGHVDDR-------------------------VAPFLPAIIPATVECLGNSKSAVHDKGVDLLLAVADPAVNGAEATLSTLERGAYFRHKNWRVREQLVRFLGRATEVDGAGV-----------------CARPAQALAGLLAEALNDSASQVRQEAAAAAVRVVEVFGAS----FLATLEAKDVRPAQLSALRERAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-------NSHTGDDRNKSPTTTFKTPAPVSRVTAALRAGGXXXXXXXXSRPTSAPAALLRRRTLAPSSLRAGGGVGVDPTMAASAATRSPAVAGGNSCSPTSRGTT-------GAVNGGGAVEESAFSALEPLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAAAGDEAARAMFGCTTDGFSRLLPLLSDAARNKSAAIRRRCLDYLMVALARWGDAAFERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREEKEFDAKAFIEAVTAAAENPQPALGESLECRDGVHADNSPSPHGSGAATGDAXXXXXXXXXXXXXXSSIAAAARRIHGAHQPSSGRPARVSNASATAGDGAAAAMAVAPGGVKSSR--VKRDR-----------GAVANSNGGRAPVRMRGRLPQPEATENVTDVSFGSAEGNADGGGGIDAGSGAPLRVTSGAVGKVPSPMHGGGDXXXXXXXXXVFSGGGGPGSNKRIGALRVPRGNAVGS-TGLPSSSAGKEAFVYSRSSSDAAXXXXXXXXHRSGLEGPLRVARRGSIIPVAADRGDAGGGXXXXXXXXXXXPVRMXAVSRVXGSVGVVHGCRVVGGNRARAGKSGEA---NQTEGGNNGGEGEGWGGASVAPAPTDGVVDRVEVLRQADDLVEQAGVAHWSSRVDALQSLLELLTTEC----------------RGERGQLVLESRPVSKRLEAVIAERARDAHFKVVAAALKLLGGLVAAHPDLMAGQAFALLPLVFPSLADAKEPVRQAASQALDACRAAYAPHQLCAALCPRVLELPPGRARTGLLEFLAVLVPHASSFLASQE-----------QLHALTQRLATALLQSPPPANWDGDVRGGXXXXXXXXXXXXXXGIGSTSTVAAYSAATRLLAALFRLNRDALLAASNSLSTESTAAVRRALVRAVPDA--------SAAISXXXXXXXXXXREDHRQRQQHQWQPCEMSSNASE-------VVVGERGRQRLSGSPGPEASPSSLSRSPSAHCLAGAACGERPMTGATDVYSPATSVGGSGGGDDVGGDLLT---AGERNNSRLLGDSPQVNSALSTPLQHQXXXXXXXXXXXXPLAPLTSLDTNTMVTPVSN----SGGGGHSLHKAGSGGGRKNPLLFTTSPSAQASAASLATQPIPDKRADDEPAEVARGLMAGLSTAARTHQKVAALSSLRGLADGGGAGARADFWPRYFGQVLMLLLEGASNXXXXXXXXXXXXMDSSPSRKR---------------------------AALAAKHVQGVRCLVARRGRLFPGATEVVVGRLVEIGGRG-----SHHVRLEVEACLADLVGVLEPSRFLAVLVPF--LMPPSYSDTLTGGGGGLGATTATAVAPAGTTATLIPEAVLVQCVALGALRALTACLPSPSLLDALGAGPLLRGVGSALGGQDLEARRRAVLVLVEMYQVLEEALLPFLSRFPTNRLKLITMYIEQRRARDHRAVMA 5364
MDA+ +LDSK+TKRR++ LE L E + PP D W +V PL+ TLRDNNFKVC+A+L CL++LV V + + PFL I PA VECLGNSK+AV +KGVDLLLAV+DPAV G T+S+L+R + H+NWRVRE+LV +LGR E+D AG+ + LAGLLA+ALNDSASQVRQEA AA RVV + G + LA LEAK VR LSALR+ XXXXXXXX S +G GG SR P A + A +S+ GVGV A T A G S TT G G G EESAFSALEPLV ++VYTERDVRREVEA K LEH SDW RWV AM+RLAGVALGG EF LL GLVR+SVHE +GHKVSE RSAVAREACRCVAVLAR LTDHFGALAELWLPELLRNTTRAV+VAAAGDEAARA+FGCT DGF RLLP L D A+NKSAAIRRRCLDY ++ALA WGDAAF+R Q R+MVA AVADADSSVRATARR YWVL RFP L+ S+MGSL PS Q + PA+ + G H HG+ ++T GAHQ + RPA ++A G+G A VK DR G V R R P A + DV+ + G D+ G XXXXXX + P + K GA RVPRG + T +P++++G ++ RS + VARR S++P A G+ P + VS+ G GV R+VG + + A + E G + +G GGA A V+DR VLRQ DDL +QAG +HW +R +AL+S+L LLT E RGE G+ VLESRP S+RLE VIAER RD +F+VVAAALKL GGLV AHP LMA ALLP VFP+LAD KEPVRQAA++AL+ACRAAY P+QLC++LCPRVLELP GRARTGLLEFLAV+VPH++ F + +LTQR+A+AL Q+PPP+NWDG + G TS A SAA RLL AL RL+ DAL AS +L E AAVRRAL P + +AA+S + + P +S E V G + + G PG SS GG + G L +GER RL +SP L TP + + PLAPLT D+N +T + SGG G AG +K+ +L +P++ ++++ D++A E V L+AGLS AR+H+K+ ALSSLRGLADG GAG R DFWPRYFGQVLMLLLEGA+ XXXXXXX + A L AKH+QGVRCLVARRG +FPG+TE+VVGRLVEIGG G S VR E EACLADLV VL+P+R+LAVL P L+P + +A + VL QCVALGALRALT L SP LL ALGAGPLL G+ +ALGG DLEAR+RAVL LVEMYQVLEEALLPFL+ FPTNRLKLITMYIEQRRARD RA A
Sbjct: 1 MDASSLSAWASELDSKNTKRRLQALEDLGEALQSQPPRSSSETASGGGLACNYDDNSWQQIVAPLVHTLRDNNFKVCRASLACLKSLVARVTEHDATRKTAGRTAAAAASGRKGSTNSSITPFLSLITPAVVECLGNSKAAVQEKGVDLLLAVSDPAVAGGRDTVSSLQRH-FAGHRNWRVRERLVAYLGRVAELDPAGINSIHXXXXXXXXXXXXAAETESSLLAGLLADALNDSASQVRQEALGAATRVVRMLGGNGGPGLLAQLEAKGVRQVVLSALRDAGSGSATGXXXXXXXXETGSAFTEGAAATAGLLSPITPAPQLASRSGAXXXXXXXXXXXXXXXXXXXXGIANGGGARLTTATRSR---RPTAAGKGGRGATTSVLTRAGVGVPGERGAPTPTGGEAAGRGGGGSRAGSPTTLIGNSPRGCALGSGG-EESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRRLAGVALGGGGSEFSALLAGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYAVLALACWGDAAFDRCAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFPDLAQSVMGSLAPSMQA-----------------------SRTPAVARRVH---GTH-------HGAPSSTSS--------------------------GAHQFAQRRPA----SAAFDGEGGLAXXXXXXXXXXXXXXXVKVDRXXXXXXXXXXXGRVLRRXXXXPARRTRPPGRAPAAHDGTMDVADNRNASSFGAGSAFDS-VGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGELAATMMPATAKS-GAFRVPRGGVSETMTRVPAAASGDA--LHQRSPAARV------------------VARRSSVVPAAGGEGE---------YQSYGAPGALGGVSK--GGRGV-QPARIVGRQQQQQRLDASAVGRREEEPGESKADG---GGAMRAVVAAPIVLDRRHVLRQMDDLADQAGASHWGARTEALESMLHLLTAEGGXXXXXXDGSNIGSGKRGEGGKFVLESRPASRRLETVIAERTRDVNFRVVAAALKLFGGLVEAHPALMADHTSALLPSVFPTLADPKEPVRQAANEALNACRAAYNPNQLCSSLCPRVLELPAGRARTGLLEFLAVVVPHSAVFFLDGHXXXXXXXXXXXHMQSLTQRVASALAQTPPPSNWDGSLGED----------------GPTSAGPAASAAIRLLTALSRLDGDALATASAALPPEPAAAVRRALSFLRPKSPSPPRRTGAAALSPTSAGESAVAAVGAVEADGTR-SPTTVSDGDGEEHGVAAVVTPAVGGVRGVGGKPGDGNEGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGEGGFALSSNPGSAFLCEERSGER--GRLEAESP-----LFTPPEQRQQRNPHRQ----PLAPLTPRDSNRQLTGEQHAGLVSGGSGKIKQLAGFPTPKKSLVLSAVAPASATRSSTVPAATSQDQKAAAEAVMVGGRLIAGLSRGARSHRKIEALSSLRGLADGEGAGGRPDFWPRYFGQVLMLLLEGAAVSSPVXXXXXXXGVGRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLRAKHLQGVRCLVARRGEMFPGSTEMVVGRLVEIGGGGGEGDPSVAVRCEAEACLADLVSVLDPARYLAVLTPLIALLPAAXXXXXXXXXXXXXXXXXXXLAGGA-------QGVLAQCVALGALRALTPRLSSPGLLGALGAGPLLAGLEAALGGGDLEARKRAVLALVEMYQVLEEALLPFLANFPTNRLKLITMYIEQRRARDKRASAA 1785
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A835ZF61_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF61_9STRA) HSP 1 Score: 168 bits (426), Expect = 4.460e-38 Identity = 112/269 (41.64%), Postives = 151/269 (56.13%), Query Frame = 1
Query: 1219 FSALEPLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPEL--LVGLVRSS-VHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAV-IVAAAGDEAARAMFGCTTDGFSRLLPLLSDAARNKSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSS-VRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREEKEFDAKAFIEAVTAAAENPQPA 2007
F+ L P+ P+ VYTE DV+RE++A L+ DW WV A+QRLAGVA GGAA L V VR+S V A+ V ++RSAV +EACR A + L LAE WLP LLRN + A ++A+ AA ++ T +GF +LLP L A K+A +R R + YL +A++ W + +ER L + V AVAD D RA A R Y L RR+P L+ +MG++D QR LREE++ A A + E QPA
Sbjct: 293 FAKLPPIQPVRVYTEGDVQREIDAVARGLQRADDWEAWVAALQRLAGVARGGAADSAALLAAFVAAVRASGVDAAVAKHVCDLRSAVQKEACRAAAAVVTALGAATAPLAEAWLPALLRNASNAKETISASAHCAAESILTATPEGFPKLLPQLLVGAAAKAAPVRHRSMGYLFLAVSTWAEGGVWERSLGPIADAVTVAVADKDVQFTRAAACRVYCALSRRYPALAARVMGAVDLRVQRR-LREEEQASA-----AAAGSGERGQPA 555
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A2K1K7V5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7V5_PHYPA) HSP 1 Score: 146 bits (369), Expect = 2.720e-31 Identity = 169/616 (27.44%), Postives = 257/616 (41.72%), Query Frame = 1
Query: 136 EKVIGDLDSKDTKRRVRGLEALDEKFRLAPPG--DGQWSPLVTPLLGTLRDNNFKVCKAALRCLEALVGHVDDRVAPFLPAIIPATVECLGNSKSAVHDKGVDLLLAVADPAVNGAEATLSTLER-GAY-FRHKNWRVREQLVRFLGRATEVDGAGVCARPAQALAGLLAEALN---DSASQVRQEAAAAAVRVVEVFGASFLATLEAKDVRPAQLSALRERAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSHTGDDRNKSPTTTFKTPAPVSRVTAALRAGGXXXXXXXXSRPTSAPAALLRRRTLAPSSLRAGGGVGVDPTMAASAATRSPAVAGGNSCSPTSRGTTGAVNGGGAVEESAFSALE-PLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVE--FPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAA-AGDEAARAMFG-CTTDGFSRLLPLLSDAARN-KSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREE 1941
E+ I L SKDTK R+ G++ L + S LV + L+DNNFKV + AL+ L + D + A++PATVE LG+ K V D G LL++ + + + +ER GAY + HKNWRVRE+ R A + A P Q L +L LN DS S VR+ A + G F L +R +Q + R + S H+ + +P F P A +A S SAP + P S G + G + A E P PI V++ERD+ +E E A L DW + AM+R+ G+ +GGA F +LL LV + ++++ RS++ ++AC+ + VL + L F AE +LP L + V+V A + D ++M C +RLLP + D A++ +SA +R RC +YL++ L RW DA +R +++ ADA S VR+ AR+ Y V R +P + + + DP +Q+ + E+
Sbjct: 2 EEAILQLQSKDTKERMAGVDRLQTLLEQCRKSLTVAEVSSLVDASISLLKDNNFKVAQGALQALASAAALAGDHLKLHFNALLPATVERLGDGKQPVRDAGRRFLLSLME-----ISSPTTIVERAGAYAWGHKNWRVREEFARTAASALNLFTAAEL--PFQRL--ILPSVLNLLEDSNSSVREAAMLCLEEMYRQGGKQFGDELVRHQLRASQFKEINARFEKIEPVRNMFD---------------------SKPHSSSAQCITPPNRFSA-TPSQHKYATQQA--------VTSHSWSAPEVKV----------------------------------------PVSSGIS---RGNSPKSKPILDADEKPADPIRVFSERDLAKEFEKAASMLAPTQDWSIRMSAMRRIEGIVVGGATKYSGFLQLLKQLVNP-----LCDQLADRRSSIVKQACQLLKVLTKELKSDFDVFAETFLPVLFKLVVITVLVIAESADACIKSMLQHCKV---ARLLPKMVDFAKHDRSAVLRARCCEYLLLVLERWFDAPEMQRSAELYEDLIKCCCADAMSEVRSLARQCYRVFARCWPDRARRLYQAFDPVTQKVINDED 527
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A2R6QSG9_ACTCC (CLIP-associated protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6QSG9_ACTCC) HSP 1 Score: 135 bits (340), Expect = 6.660e-28 Identity = 158/613 (25.77%), Postives = 259/613 (42.25%), Query Frame = 1
Query: 136 EKVIGDLDSKDTKRRVRGLEALDE-----KFRLAPPGDGQWSPLVTPLLGTLRDNNFKVCKAALRCLEALVGHVDDRVAPFLPAIIPATVECLGNSKSAVHDKGVDLLLAVADPAVNGAEATLSTLERGAYFR--HKNWRVREQLVRFLGRATEVDGAGVCARPAQALAGLLAEALNDSASQVRQEAAAAAVRVVEVFGASFLATLEAKDVRPAQLSALRERAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNSHTGDDRNKSPTTTFKTPAPVSRVTAALRAGGXXXXXXXXSRPTSAPAALLRRRTLAPSSLRAGGGVGVDPTMAASAATRSPAVAGGNSCSPTSRGTTGAVNGGGAVEESAFSALEPLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAA-AGDEAARAMF-GCTTDGFSRLLPLLSDAARN-KSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREE 1941
E+ I +KDTK R+ G+E L + + L+P + + LV L L+DNNF+V + AL+ L + + A++PATVE LG++K V D LLL + + + +ER + HK+WRVRE+ R + A + + L +L + LNDS VR+ A + G F L+ + + L + R + NS G RN PV PA+L +R+ SP ++ ++ V+ G + ++P I VY+E+++ +E E L DW +GAMQR+ G+ +GGAA ++P GL++ V + ++S+ RS++ ++ C + L++ L F A AE+++P L + V+V A + D + M C +R+LP ++D+ +N +SAA+R RC +Y ++ L W DA +R +++ VADA S VRATAR Y + + +P S + S DP QR ++ EE
Sbjct: 2 EEAIEMARTKDTKERMAGVERLHQILEASRKSLSP---SEVTALVDCCLDLLKDNNFRVSQGALQALASAAVLSGEHFKLHFSALVPATVERLGDAKQPVRDAAKRLLLTLME-----VSSPTIIVERAMSYACTHKSWRVREEFARTVTSAIGLFASTELPLQRAILPPIL-QMLNDSNHSVREAAILCIEDMYTHVGPQFCDELQRHHIPTSMLKDINSRLERIEPKV--------------------------NSSDGLARNY----------PVVETK---------------------PASLNPKRS-----------------------------------SPKAKNSSRDVSLFGGDNDLTEKQIDP---IKVYSEKELIKEFEKIASTLVPEKDWSVRIGAMQRVEGLVIGGAA-DYP-CFRGLLKQLVGP-LSTQLSDRRSSIVKQGCHLLNFLSKELLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKV---ARVLPRIADSGKNDRSAALRTRCCEYALLLLEYWADAPEIQRAADLYEDLLKCCVADAMSEVRATARTCYRMFAKTWPERSRRLFLSFDPVIQR-IINEE 503
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A6G0XDU9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDU9_9STRA) HSP 1 Score: 122 bits (307), Expect = 4.230e-24 Identity = 78/254 (30.71%), Postives = 134/254 (52.76%), Query Frame = 1
Query: 1243 PISV-YTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAV-IVAAAGDEAARAMFGCTTDGFSRLLPLLSDAARNKSAAIRRRCLDYLMVALARWGDAAFERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREEKEFDAKAFIEAVTAAAENP 1998
PIS +++R++ E++ L S+W R V AMQRL + GGAA++ + +R + E + +V ++RSAV REAC +AV+A + D F AE ++ LL++T + I+A + D +++ T G+ +++ L D AR+++ +R C+DYL +A + W ER ++ + DA + VR ARR +W R F + S+ LD S+QR L+E+ + + V + +P
Sbjct: 263 PISCQFSDRELTSELQRVTQGLTPDSEWSRRVEAMQRLQALVAGGAALQ--PIFASTLRQ-LRETLCEQVGDLRSAVLREACTTIAVIANAMGDAFNTHAEFFVAALLKSTIVTIQIIAVSADSCLKSIVRSTQTGYPKVMTKLIDGARSRNQVLRLHCVDYLTMAFSLWHVVVLERAADSMAALLPHILCDAQADVRLAARRCFWSFHRTFEARAESVRMQLDSSTQRR-LQEDVNMEGARNVNPVDLTSIDP 512
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A1S2XTS2_CICAR (CLIP-associated protein isoform X1 n=9 Tax=IRL clade TaxID=2233839 RepID=A0A1S2XTS2_CICAR) HSP 1 Score: 118 bits (296), Expect = 9.840e-23 Identity = 79/241 (32.78%), Postives = 134/241 (55.60%), Query Frame = 1
Query: 1231 EPLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAA-AGDEAARAMF-GCTTDGFSRLLPLLSDAARN-KSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREE 1941
+P+ PI VY+++++ RE+E L DW +GAMQR+ G+ LGGAA ++P GL++ + + ++S+ RS++ ++AC + L++ L F A AE+++P L + V+V A + D + M C +R+LP ++D A+N ++A +R RC +Y ++ L W DA R +M+ V+DA S VR+TAR Y + + +P S + S DP QR + E+
Sbjct: 270 KPIEPIKVYSDKELIREIEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAA-DYP-CFRGLLKQ-LGGPLSTQLSDRRSSIVKQACHLLCFLSKDLLGDFEAYAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKV---ARVLPRIADCAKNDRNAVLRARCCEYALLVLEHWPDAPEIHRSADLYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEED 504
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A804L9P6_MUSAM ((wild Malaysian banana) hypothetical protein n=2 Tax=Musa TaxID=4640 RepID=A0A804L9P6_MUSAM) HSP 1 Score: 117 bits (293), Expect = 2.200e-22 Identity = 84/257 (32.68%), Postives = 141/257 (54.86%), Query Frame = 1
Query: 1201 AVEESAFS-----ALEPLV-PISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAA-AGDEAARAMF-GCTTDGFSRLLPLLSDAARN-KSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREE 1941
A +E++FS A E LV PI VY+E+++ +E+E L DW + AMQR+ G+ GGAA ++P L L + + + ++ + RS++ ++AC +++L++ L F AE+++P LL+ V+V A + D + + C +R+LP ++D A+N KSA +R RC DY ++ L W DA R +++ VADA S VR+TAR Y + + +P S + S +P+ QR + E+
Sbjct: 254 APKETSFSSGEIDATEKLVVPIKVYSEKELNKEMERIASTLVPDKDWSLRIAAMQRVEGLVFGGAA-DYPSFLTLLKQLATP--LSTQLLDRRSSIVKQACHLLSLLSKELLGDFETCAEMFIPVLLKLVVITVLVIAESADTCIKTILRNCKV---ARILPRIADTAKNDKSAVLRARCCDYALLVLEYWADALEIHRSADLYEDLIKCCVADAMSEVRSTARTCYRMFTKTWPERSQRLFLSFEPAIQRIINEED 504
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: UPI0010A3433D (CLIP-associated protein-like isoform X1 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A3433D) HSP 1 Score: 114 bits (286), Expect = 1.470e-21 Identity = 78/240 (32.50%), Postives = 131/240 (54.58%), Query Frame = 1
Query: 1234 PLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAA-AGDEAARAMF-GCTTDGFSRLLPLLSDAARN-KSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREE 1941
P+ P+ +Y+E+++ RE E L DW +GAMQR+ G+ LGGAA ++P GL++ V + ++S+ RS++ ++AC + L++ L F AE+++P L + V+V A + D + M C +R+LP ++D A+N + A +R RC +Y ++ L W DA +R +M+ V+DA S VR+TAR Y + + +P S + S DP QR + E+
Sbjct: 271 PIDPVKLYSEKELIREFEKIASTLVPEKDWSIRIGAMQRIEGLVLGGAA-DYP-CFRGLLKQLVGP-LSVQLSDRRSSIVKQACHLLCFLSKELLGDFEQCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKV---ARVLPRIADCAKNDRGAVLRARCCEYALLILEHWPDAPEIQRSADLYEDMIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEED 504
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A5B7BKL3_DAVIN (Putative CLIP-associated protein isoform X1 (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BKL3_DAVIN) HSP 1 Score: 112 bits (281), Expect = 3.070e-21 Identity = 79/241 (32.78%), Postives = 132/241 (54.77%), Query Frame = 1
Query: 1231 EPLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAA-AGDEAARAMF-GCTTDGFSRLLPLLSDAARN-KSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREE 1941
+P+ PI VY+E+++ RE E L DW +GAMQR+ G+ +GGAA ++P GL++ V + ++S+ RS++ ++AC + L++ L F A AE+++P L + V+V A + D + M C R+LP ++D A+N ++A +R RC +Y ++ L W DA +R +++ V DA S VR+TAR Y + + +P S + S DP QR + E+
Sbjct: 240 KPVDPIKVYSEKELIREFEKISSTLVPDKDWSIRIGAMQRVEGLVIGGAA-DYP-CFRGLLKQLVGP-LSTQLSDRRSSIVKQACHLLNFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKA---VRVLPRIADCAKNDRNAVLRARCCEYALLILECWPDAPEIQRSADIFEDLIKCCVGDAMSEVRSTARTCYRMFAKTWPERSRRLFSSFDPVIQRIINDED 474
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Match: A0A5B7AGT6_DAVIN (Putative CLIP-associated protein isoform X1 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7AGT6_DAVIN) HSP 1 Score: 112 bits (281), Expect = 5.660e-21 Identity = 79/241 (32.78%), Postives = 132/241 (54.77%), Query Frame = 1
Query: 1231 EPLVPISVYTERDVRREVEAAKVALEHGSDWLRWVGAMQRLAGVALGGAAVEFPELLVGLVRSSVHEAIGHKVSEIRSAVAREACRCVAVLARGLTDHFGALAELWLPELLRNTTRAVIVAA-AGDEAARAMF-GCTTDGFSRLLPLLSDAARN-KSAAIRRRCLDYLMVALARWGDAA-FERHLTQTRNMVATAVADADSSVRATARRTYWVLKRRFPMLSGSIMGSLDPSSQRHVLREE 1941
+P+ PI VY+E+++ RE E L DW +GAMQR+ G+ +GGAA ++P GL++ V + ++S+ RS++ ++AC + L++ L F A AE+++P L + V+V A + D + M C R+LP ++D A+N ++A +R RC +Y ++ L W DA +R +++ V DA S VR+TAR Y + + +P S + S DP QR + E+
Sbjct: 270 KPVDPIKVYSEKELIREFEKISSTLVPDKDWSIRIGAMQRVEGLVIGGAA-DYP-CFRGLLKQLVGP-LSTQLSDRRSSIVKQACHLLNFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKA---VRVLPRIADCAKNDRNAVLRARCCEYALLILECWPDAPEIQRSADIFEDLIKCCVGDAMSEVRSTARTCYRMFAKTWPERSRRLFSSFDPVIQRIINDED 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig274.7498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig274.7498.1 >prot_H-paniculata_contig274.7498.1 ID=prot_H-paniculata_contig274.7498.1|Name=mRNA_H-paniculata_contig274.7498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1780bp MDAAVWEKVIGDLDSKDTKRRVRGLEALDEKFRLAPPGDGQWSPLVTPLLback to top mRNA from alignment at H-paniculata_contig274:22226..40431+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig274.7498.1 ID=mRNA_H-paniculata_contig274.7498.1|Name=mRNA_H-paniculata_contig274.7498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18206bp|location=Sequence derived from alignment at H-paniculata_contig274:22226..40431+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig274:22226..40431+ >mRNA_H-paniculata_contig274.7498.1 ID=mRNA_H-paniculata_contig274.7498.1|Name=mRNA_H-paniculata_contig274.7498.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=10680bp|location=Sequence derived from alignment at H-paniculata_contig274:22226..40431+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |