mRNA_H-paniculata_contig27376.7493.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig27376.7493.1
Unique NamemRNA_H-paniculata_contig27376.7493.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A7S2XVA8_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVA8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.150e-25
Identity = 57/85 (67.06%), Postives = 64/85 (75.29%), Query Frame = 1 
Query:   25 IKDLTLVFCRREEEDGGCKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYPSTM 279
            +KDLTLVFCRR  E+    QILLG KK GFG GKWN GFGGKVE GETIE AA RELLEES + A+EL  RG L F+V +YP+ M
Sbjct:   63 VKDLTLVFCRRLCENTSEPQILLGLKKFGFGEGKWN-GFGGKVEEGETIESAAARELLEESGLQAEELEQRGHLAFHVDTYPAVM 146
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A835YJU4_9STRA (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU4_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.870e-25
Identity = 57/87 (65.52%), Postives = 66/87 (75.86%), Query Frame = 1 
Query:   19 KKIKDLTLVFCRREEEDGGCKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYPSTM 279
            K+ +DLTLVFCRR   DG   +ILLG KK+GFG GKWN GFGGKVEAGE+IE AAKRELLEE+ VTA ++A RG L F + SY   M
Sbjct:   15 KQPQDLTLVFCRRRTADGP--EILLGLKKKGFGTGKWN-GFGGKVEAGESIEVAAKRELLEEAGVTATKVAKRGHLTFVLDSYEHIM 98
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: D8LFE9_ECTSI (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE9_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 5.280e-25
Identity = 50/68 (73.53%), Postives = 61/68 (89.71%), Query Frame = 1 
Query:   76 CKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYPSTM 279
             K+ILLG KKRGFG GKWN GFGGKVE+GE++E+AAKREL+EE+ VTA+EL++RG LIF+VPSYPS M
Sbjct:   53 AKEILLGMKKRGFGEGKWN-GFGGKVESGESVEEAAKRELMEEAGVTARELSLRGRLIFHVPSYPSVM 119
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A482V0Z0_9ARCH (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482V0Z0_9ARCH)

HSP 1 Score: 94.7 bits (234), Expect = 1.450e-22
Identity = 54/99 (54.55%), Postives = 64/99 (64.65%), Query Frame = 1 
Query:    1 MTTSPGKKIK-----DLTLVFCRREEEDG-GCKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYPSTM 279
            M +  G+ +K     D TLVFCRR  +     KQILLG KKRGFGVGKWN GFGGK+E GE++EQAA+RELLEES V A  L   G L+F +      M
Sbjct:    1 MASEEGQDVKAYTSQDYTLVFCRRPSQTPTASKQILLGMKKRGFGVGKWN-GFGGKIEEGESVEQAARRELLEESGVIANSLQRIGYLVFKLTDIAKIM 98
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A6H5JY16_9PHAE (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY16_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.520e-19
Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 1 
Query:   82 QILLGKKKRGFGVGKWN-EG------------FGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYPSTM 279
            +ILLG KKRGFG GKWN EG            FGGKVE GE++E+AAKREL+EE+ VTA+EL++RG LIF+VPSY S M
Sbjct:   96 EILLGMKKRGFGEGKWNGEGQRAMESWLRESRFGGKVERGESVEEAAKRELMEEAGVTARELSLRGRLIFHVPSYHSVM 174
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A369SAD1_9METZ (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369SAD1_9METZ)

HSP 1 Score: 83.2 bits (204), Expect = 5.340e-18
Identity = 50/89 (56.18%), Postives = 57/89 (64.04%), Query Frame = 1 
Query:    4 TTSPGKKIKDLTLVFCRREEEDGGCKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYP 270
            T + GK+IK LTL F   E  D    QILLGKKKRGFG G WN GFGGKV  GETI + AKRE+LEE  + A  L  RGI+ F   + P
Sbjct:   11 TNANGKRIKLLTLAFLFSEGRD----QILLGKKKRGFGEGWWN-GFGGKVVDGETIVEGAKREVLEECSLNASSLTKRGIIDFEFVNDP 94
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A7SEA9_NEMVE (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SEA9_NEMVE)

HSP 1 Score: 82.4 bits (202), Expect = 5.830e-18
Identity = 43/63 (68.25%), Postives = 49/63 (77.78%), Query Frame = 1 
Query:   82 QILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYP 270
            ++LLG KKRGFGVG+WN GFGGKVE GETIEQAA+RELLEES +TA  L   GIL+F     P
Sbjct:   17 RVLLGMKKRGFGVGRWN-GFGGKVECGETIEQAARRELLEESGLTATRLEEAGILMFEFKGDP 78
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A1G2BLS5_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Candidatus Komeilibacteria bacterium RIFCSPHIGHO2_01_FULL_52_14 TaxID=1798549 RepID=A0A1G2BLS5_9BACT)

HSP 1 Score: 82.4 bits (202), Expect = 7.750e-18
Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1 
Query:    1 MTTSPGKKI-KDLTLVFCRREEEDGGCKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYPSTM 279
            ++TS  K   K LTL F   +       +ILLG KKRGFG G+WN GFGGKV AGETIE AA+RELLEE+ +TA++L  RG+L F+  + P T+
Sbjct:    7 VSTSTSKSSPKTLTLAFVVLKN------RILLGMKKRGFGAGRWN-GFGGKVLAGETIEVAAQRELLEETGITAEKLRQRGMLTFHFENDPVTL 93
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A1F5BT80_9BACT (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Candidatus Azambacteria bacterium RIFCSPLOWO2_01_FULL_46_25 TaxID=1797298 RepID=A0A1F5BT80_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 1.440e-17
Identity = 46/81 (56.79%), Postives = 55/81 (67.90%), Query Frame = 1 
Query:   28 KDLTLVFCRREEEDGGCKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYP 270
            K LTLVF RR        QILLG KKRGFG G+WN GFGGKV+ GE++E AA+RE LEE+ + A+EL+ RG L F     P
Sbjct:   14 KFLTLVFARR------ASQILLGMKKRGFGAGRWN-GFGGKVKDGESVEDAARREFLEETGLAARELSKRGDLHFTFAGDP 87
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BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Match: A0A6A4WKX2_AMPAM (Oxidized purine nucleoside triphosphate hydrolase n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WKX2_AMPAM)

HSP 1 Score: 80.5 bits (197), Expect = 3.620e-17
Identity = 47/81 (58.02%), Postives = 55/81 (67.90%), Query Frame = 1 
Query:   28 KDLTLVFCRREEEDGGCKQILLGKKKRGFGVGKWNEGFGGKVEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYP 270
            K LTLV  R    D   +++LLG KKRGFG GKWN GFGGK+E GET+E+AAKRELLEES V A+EL   G + F     P
Sbjct:    4 KVLTLVLVR----DVAQQRVLLGMKKRGFGAGKWN-GFGGKLEPGETVEEAAKRELLEESCVHAEELLPAGRIEFEFQGDP 79
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27376.7493.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2XVA8_9STRA1.150e-2567.06Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A835YJU4_9STRA2.870e-2565.52Oxidized purine nucleoside triphosphate hydrolase ... [more]
D8LFE9_ECTSI5.280e-2573.53Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A482V0Z0_9ARCH1.450e-2254.55Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A6H5JY16_9PHAE1.520e-1962.03Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A369SAD1_9METZ5.340e-1856.18Oxidized purine nucleoside triphosphate hydrolase ... [more]
A7SEA9_NEMVE5.830e-1868.25Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A1G2BLS5_9BACT7.750e-1853.19Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A1F5BT80_9BACT1.440e-1756.79Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A6A4WKX2_AMPAM3.620e-1758.02Oxidized purine nucleoside triphosphate hydrolase ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27376contigH-paniculata_contig27376:189..1264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.2
Seed ortholog evalue1.7e-23
Seed eggNOG ortholog2880.D8LFE9
Preferred nameNUDT1
KEGG koko:K03574,ko:K17816
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001669,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006259,GO:0006281,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0007154,GO:0007275,GO:0007548,GO:0007568,GO:0008150,GO:0008152,GO:0008406,GO:0008413,GO:0008584,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0010035,GO:0010038,GO:0012505,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022414,GO:0030141,GO:0030515,GO:0031090,GO:0031410,GO:0031668,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031982,GO:0032501,GO:0032502,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0035539,GO:0036219,GO:0042221,GO:0042262,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044713,GO:0044714,GO:0045137,GO:0046060,GO:0046061,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046546,GO:0046661,GO:0046686,GO:0046700,GO:0047429,GO:0047693,GO:0048513,GO:0048608,GO:0048731,GO:0048856,GO:0050896,GO:0051716,GO:0055086,GO:0061458,GO:0070013,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072523,GO:0090304,GO:0097159,GO:0097223,GO:0097708,GO:0099503,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576
EggNOG free text desc.2-hydroxy-adenosine triphosphate pyrophosphatase activity
EggNOG OGs2S254@2759,COG0494@1
EC3.6.1.55,3.6.1.56
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Exons2
Model size279
Cds size279
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929825.762743-CDS-H-paniculata_contig27376:188..3211622929825.762743-CDS-H-paniculata_contig27376:188..321Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27376 189..321 +
1691481028.2175193-CDS-H-paniculata_contig27376:188..3211691481028.2175193-CDS-H-paniculata_contig27376:188..321Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27376 189..321 +
1622929825.778438-CDS-H-paniculata_contig27376:1118..12641622929825.778438-CDS-H-paniculata_contig27376:1118..1264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27376 1119..1264 +
1691481028.2303576-CDS-H-paniculata_contig27376:1118..12641691481028.2303576-CDS-H-paniculata_contig27376:1118..1264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig27376 1119..1264 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27376.7493.1prot_H-paniculata_contig27376.7493.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig27376 189..1264 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig27376.7493.1

>prot_H-paniculata_contig27376.7493.1 ID=prot_H-paniculata_contig27376.7493.1|Name=mRNA_H-paniculata_contig27376.7493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
MTTSPGKKIKDLTLVFCRREEEDGGCKQILLGKKKRGFGVGKWNEGFGGK
VEAGETIEQAAKRELLEESFVTAKELAMRGILIFNVPSYPSTM
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mRNA from alignment at H-paniculata_contig27376:189..1264+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig27376.7493.1 ID=mRNA_H-paniculata_contig27376.7493.1|Name=mRNA_H-paniculata_contig27376.7493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1076bp|location=Sequence derived from alignment at H-paniculata_contig27376:189..1264+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACAACGAGTCCGGGAAAAAAGATCAAGGACCTCACCCTCGTTTTTTG
CCGGAGGGAAGAAGAGGACGGAGGATGCAAGCAAATCCTCTTGGGAAAGA
AGAAACGAGGCTTCGGGGTGGGTAAATGGAACGGTAAGATTTCACTTATG
GAAATTATCACTTGGCCGAAAACGCTACAAACGTAGCGCACCACCCAATG
GATCTATTTTTTAGCCGTGACCCAGGGGTAATTTCTACAAATATGGTGGA
CAATGGTTGCACCGTACGCTTGTGCACACGTACACGTCCTCCACTACACA
GAGCAACTTGATCTGTATAATCCCCAACGCATAGTTTGTGTGGTGTAAGT
CATTGAACGGGGGGTGCGGAACGGTCGTGTGTGGCACGGGTGCGGTCTGT
CATAGCTAGCTCTTGACCCCGATGTATACCGACGATTATGAGGACTGACG
TCCCTGCCCCACTCTTGACTCGTTTAATGTAGTGTAGGACACAATGAAAG
ACCGAAAGTCTGTGAAACGTTCTCGGCAGTTTTTTCAACAGTCATTATGC
TCCATACTTGCGTCCTGCACATGTCAAAACTTCGGAGGGCGGGAAGGGGG
AGGCGGATATTCCCCTCTGGGGTGTGTTGTCCAACGTTTCTGGACTTGCC
GTAAAACAGCGGGGGAGAGGGCGGGACAAAATGGAGGTATCCTCAGTATT
CTTCAATTTGCTGAACAAATTTATGGGGATAACCTCCTCCGAAGTCTGTT
GTCCAACGTCTCCTACTGTACTTGTCGTAAATCGTAGGTCGGGGTATTGT
CTCCCTTCAAAGCTGTTGTCACCATGCACATTATCGCTTTGCTTGAAGCT
GCTCTTATTCGACCGCTGCCGTATGCATCCGTCAGCAAAGCCCCTCTGTT
TACGTGGCCCGAATGACGCGCTGTTTTGAGAAGGATTTGGTGGTAAGGTG
GAAGCCGGGGAAACGATTGAACAAGCGGCGAAACGAGAACTACTGGAAGA
ATCGTTCGTGACGGCGAAGGAGCTTGCAATGCGAGGAATCCTGATTTTCA
ACGTTCCGTCTTACCCTTCAACTATG
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Coding sequence (CDS) from alignment at H-paniculata_contig27376:189..1264+

>mRNA_H-paniculata_contig27376.7493.1 ID=mRNA_H-paniculata_contig27376.7493.1|Name=mRNA_H-paniculata_contig27376.7493.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=558bp|location=Sequence derived from alignment at H-paniculata_contig27376:189..1264+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACAACGAGTCCGGGAAAAAAGATCAAGGACCTCACCCTCGTTTTTTG
CCGGAGGGAAGAAGAGGACGGAGGATGCAAGCAAATCCTCTTGGGAAAGA
AGAAACGAGGCTTCGGGGTGGGTAAATGGAACGATGACAACGAGTCCGGG
AAAAAAGATCAAGGACCTCACCCTCGTTTTTTGCCGGAGGGAAGAAGAGG
ACGGAGGATGCAAGCAAATCCTCTTGGGAAAGAAGAAACGAGGCTTCGGG
GTGGGTAAATGGAACGAAGGATTTGGTGGTAAGGTGGAAGCCGGGGAAAC
GATTGAACAAGCGGCGAAACGAGAACTACTGGAAGAATCGTTCGTGACGG
CGAAGGAGCTTGCAATGCGAGGAATCCTGATTTTCAACGTTCCGTCTTAC
CCTTCAACTATGAAGGATTTGGTGGTAAGGTGGAAGCCGGGGAAACGATT
GAACAAGCGGCGAAACGAGAACTACTGGAAGAATCGTTCGTGACGGCGAA
GGAGCTTGCAATGCGAGGAATCCTGATTTTCAACGTTCCGTCTTACCCTT
CAACTATG
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