mRNA_H-paniculata_contig2697.7380.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2697.7380.1
Unique NamemRNA_H-paniculata_contig2697.7380.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: D7G1R6_ECTSI (Ubiquitin thioesterase OTU1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R6_ECTSI)

HSP 1 Score: 410 bits (1055), Expect = 1.790e-136
Identity = 232/378 (61.38%), Postives = 268/378 (70.90%), Query Frame = 3
Query:    6 QLKAGFPPQDVSGSETDPVVKLGITSGSALTVLERKETAAPAAQLPATGAAASPSPAAALPSAAPASRTAFSSH--------ARLPQPP------------------PQPQSGGELH---EMLRSLVDMGFPEAQAARALKAAGGDMITAVEMCMGGDPSAFASQTAPAAPVAPPS-VIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQI 1049
            QLKAGFPP+DVSGS+ DPVV LGITSGSALTVLERK                           AP S               + +P PP                  PQ Q   E      +++SLVDMGF +  AA+AL+ AGGD+ TAVE+CM GDP+A  S +  AA  A  + +++RRIIDADNSCLFNAVGYALRRKRKVG+ELR MITEAVRGSP+VYNEGILGK PEEYC WI D KSWGGEIELSILSKKL VMITVVDIQTNNAYSYGEE GF +R+F+IYDG+HYDALA+A++E+APESDDVTVF+PS   KE+ +AK +AADLK+RNQ+ DMG   LKCMVC KLL G+KGALEHARATGHQNFGQ+
Sbjct:   46 QLKAGFPPKDVSGSDADPVVSLGITSGSALTVLERK---------------------------APPSXXXXXXXXXXXXXXXSSVPSPPSXXXXXXXXXXXXXXXXXPQLQRRQEPAVDPALVQSLVDMGFEQGFAAKALEVAGGDINTAVEICMSGDPAALGSDSGRAASTATAARIMVRRIIDADNSCLFNAVGYALRRKRKVGTELRQMITEAVRGSPEVYNEGILGKQPEEYCNWISDPKSWGGEIELSILSKKLVVMITVVDIQTNNAYSYGEEHGFGRRLFIIYDGIHYDALAEAANETAPESDDVTVFNPSEKEKEI-LAKTVAADLKARNQYTDMGNASLKCMVCFKLLAGEKGALEHARATGHQNFGQV 395          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A835ZCY8_9STRA (Ubiquitin thioesterase OTU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY8_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.150e-77
Identity = 158/364 (43.41%), Postives = 213/364 (58.52%), Query Frame = 3
Query:    9 LKAGFPPQDVSGSETDPVVKLGITSGSALTVLERKETAAPAAQLPATGAAASPSPAAALPSAAPASRTAFSSHARLPQPPPQPQSGGELHE--MLRSLVDMGFPEAQAARALKAAGGDMITAVEMCMGGD------PSAFASQTAPA-------APVAPPSVIIRRIIDADNSCLFNAVGYALRRKR--KVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQI 1049
            + +GFPP++V+G     +  LGIT+GSA++V +   TA P A            PAAA P                             H     + L+DMGF  A AA+AL+ AGGD   A+E+C+ G        S  AS T  A       A +      +RR++DADNSCLF +VGY + R+R  K G  +R +IT+AVR +PD ++E ILG  PE YC WI++ + WGGEIEL +LS    + I VVDI T   Y YGE+ G+ +RIF++YDGVHYDA+A+A   +APE  D T FD +   K +E AK++AA+LK + Q++D+  CDLKC+VC K L+GQKGA +HA AT HQNFGQI
Sbjct:   51 ILSGFPPKEVAGGTDAAITALGITNGSAVSVAQ-STTATPDA------------PAAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHPGAATKDLIDMGFSPAVAAKALQLAGGDAAAAIELCLSGGLDDRDIASDIASGTGSANATGNNSATLEHRPTFVRRVVDADNSCLFTSVGYCVTRERGEKGGGRMRRVITQAVRAAPDTFSEAILGMQPEAYCGWIMNPEKWGGEIELVVLSDHYKLEICVVDIATGRTYLYGEDKGYSQRIFLLYDGVHYDAMAEAFSPNAPEDLDTTRFDITDDAK-VEAAKSVAAELKRQKQYVDLAGCDLKCLVCGKGLQGQKGARDHAVATRHQNFGQI 400          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: K8Z3P6_NANGC (Ubiquitin thioesterase OTU1 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3P6_NANGC)

HSP 1 Score: 241 bits (616), Expect = 3.670e-71
Identity = 145/359 (40.39%), Postives = 209/359 (58.22%), Query Frame = 3
Query:    6 QLKAGFPPQDVSGSE-TDPVVKLGITSGSALTVLERKETAAPAAQLPATGAAASPSPAAALPSAAPASRTAFSSHARLPQPPPQPQSGGELHEMLRSLVDMGFPEAQAARALKAAGGDMITAVEMCMGG---DPSAFASQTAPAAPVAPPS-------VIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDE-SAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
            +L+AGFPP+D++  + T  +  LGI +GSA+TV++                                  T  +S  + P P   P +        + ++DMGF  A A +AL+ + G++  A+++C+ G   D S     TAP  PV           V++RR+IDADNSCLFNAVGY + + R++G +LR +I + VR SPDVY E +LGK+P++Y  WI D   WGGEIEL ILS+     +  ++I++ +AY YGE   + +RI+++YDGVHYDALA A+   +APES D+T F P+      + A A+AA+LK   QF+D+  C L+CMVC K L GQ+ AL HAR T HQNFG+
Sbjct:   46 KLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKED--------------------------------TQVTSGDKAPIPVTLPGA--------QQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQF-PAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGE 363          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A6V1QB17_HETAK (Ubiquitin thioesterase OTU1 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QB17_HETAK)

HSP 1 Score: 223 bits (568), Expect = 2.900e-66
Identity = 115/202 (56.93%), Postives = 141/202 (69.80%), Query Frame = 3
Query:  453 IRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASD---ESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQI 1049
            +RR+IDADNSCLFNAVGY   R RK    LR +I   V G+PD + E ILGK P EY  WI D + WGGEIEL+IL +  A  I VVDIQ+ N Y YG E  F +R F++YDGVHYDA+A+A +   E   E  DVTVFD S   + +  A  +AA+LK+RNQF+++  CDLKC+VC + L+GQ GALEHARAT HQNFGQI
Sbjct:    6 VRRVIDADNSCLFNAVGYVFERNRKAAPRLRRLIANTVLGNPDKWTEAILGKPPHEYQSWIQDPQKWGGEIELAILCQFFASEIVVVDIQSLNTYKYGSE--FNQRAFLLYDGVHYDAMAEALESQGEKKSEDTDVTVFDSSDESR-ISAALDVAAELKARNQFVNLAGCDLKCLVCGRGLKGQAGALEHARATSHQNFGQI 204          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: I0YIJ5_COCSC (Ubiquitin thioesterase OTU1 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIJ5_COCSC)

HSP 1 Score: 199 bits (506), Expect = 6.640e-57
Identity = 106/218 (48.62%), Postives = 140/218 (64.22%), Query Frame = 3
Query:  417 APAAPVAPP----SVIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRN----QFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
            AP A VA P    SV++RR++ +DNSCLFNAVGY + R R   S LR +I E V G P+ Y+E  LGK  +EYC WI D + WGG IELSILS+     I   D+QT     YG++ G+ +R+ +IYDG+HYDALA A+ E APE  D+T+FD    G E +     AA+L +++    QF D     L+C VC   ++G+K ALEHA+ATGHQNFG+
Sbjct:    4 APPASVAVPGGSGSVVVRRVVASDNSCLFNAVGYVVERSRDKASHLRRVIAETVAGDPEEYSEAFLGKPNKEYCAWIKDPQKWGGAIELSILSRYFGREIAAYDVQTKRCDVYGQDAGYEERVMLIYDGLHYDALAVAAFEGAPEDVDITMFDTH--GSEADSIGRAAAELVAKSHEARQFTDTANFTLRCGVCQLGVKGEKEALEHAKATGHQNFGE 219          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: E1ZSA6_CHLVA (Ubiquitin thioesterase OTU1 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZSA6_CHLVA)

HSP 1 Score: 196 bits (498), Expect = 9.760e-55
Identity = 107/217 (49.31%), Postives = 135/217 (62.21%), Query Frame = 3
Query:  405 ASQTAPAA-PVAPPSVIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEM--AKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
            A Q AP A  +A  + ++RRIID+DNSCLFNAVGY   R RK+   LR +I +AV   P  +NE +LGK P EYC+WI D   WGG IELSILS+ L   I   DIQT     YG+  G+ +R+ +IYDG+HYDALA A+ E APE  DVTV   S    E+ M  AK LA   ++   F D     L+C VC   L+G+K A+EHA+ TGH NF +
Sbjct:   79 AQQGAPTAVALADGTAVVRRIIDSDNSCLFNAVGYVTERSRKLAPRLRQVIADAVLADPFEWNEAVLGKEPAEYCRWIKDPNKWGGAIELSILSRHLGREIAAFDIQTTRVDIYGQGSGYSERVMLIYDGLHYDALAVAAFEGAPEQLDVTVIPTSGTRTEMVMQGAKQLATKAQTARAFTDTANFTLRCGVCQIGLKGEKEAVEHAKTTGHTNFSE 295          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A1R2CMQ5_9CILI (Ubiquitin thioesterase OTU1 n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CMQ5_9CILI)

HSP 1 Score: 195 bits (495), Expect = 2.520e-54
Identity = 98/198 (49.49%), Postives = 138/198 (69.70%), Query Frame = 3
Query:  450 IIRRIIDADNSCLFNAVGYALR-RKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNF 1040
            ++RRII ADNSCLFN++ YAL  R +K G+ LR +I+  +   PD YN+ +LGKS +EY  WI    SWGG IELSILSK   +MI  V IQT +   +G+E G++K I+VIYDG+HYD LA+ S + APES+DVT+FD +   +  + A ++A +LK  +Q+ D+G   L+C +C   L G++GA++HA+ TGHQNF
Sbjct:   93 LVRRIIAADNSCLFNSIAYALETRNKKSGTFLRNVISAYIESDPDTYNKTLLGKSNQEYVSWIEQESSWGGGIELSILSKYYQIMIGAVSIQTAHVDIFGQEDGYMKIIYVIYDGIHYDVLAKTSGDDAPESEDVTIFD-AGDIETYQQALSIANELKIAHQYTDVGNFTLRCGICYIGLVGERGAIQHAQDTGHQNF 289          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A2P6TG40_CHLSO (Ubiquitin thioesterase OTU1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TG40_CHLSO)

HSP 1 Score: 196 bits (499), Expect = 1.240e-53
Identity = 109/216 (50.46%), Postives = 139/216 (64.35%), Query Frame = 3
Query:  411 QTAPAA-PVAPPSVIIRRIIDADNSCLFNAVGY-ALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEM--AKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
            Q AP A P+   + ++RRIID+DNSCLFNAVGY AL R RK    LR +I +AV   P  +NE +LGK P EYC+WI D+  WGG IELSILS+ L   I   DI T     YG++ G+ +R+ +IYDG+HYDALA A+ E APES D TV   S    ++ M  A+ LAA  K+  QF D     L+C VC   L+G+K A+EHA+ATGH NF +
Sbjct:  187 QGAPTAVPLPDGTAVVRRIIDSDNSCLFNAVGYVALGRTRKEAPRLRQVIADAVLADPFEWNEAVLGKEPAEYCRWIKDSNKWGGAIELSILSRHLQREIAAFDISTLRCDIYGQDSGYSERVLLIYDGLHYDALAVAAFEGAPESRDTTVIPSSGARTDVVMEGARQLAAKAKAARQFTDTSNFTLRCGVCQIGLKGEKEAVEHAKATGHTNFSE 402          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A2P6NQK6_9EUKA (Ubiquitin thioesterase OTU1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQK6_9EUKA)

HSP 1 Score: 192 bits (487), Expect = 8.570e-53
Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 3
Query:  450 IIRRIIDADNSCLFNAVGYALR-RKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNF 1040
            ++RR++D+DNSCLFN++GY L  R RKVG  LR +I + +   PD YNE ILGK+  EY  W+L   SWGG IELSIL+      I+  DI+T   Y+YGE  G+ +R+F+IYDG+HYDA+A   D S PE  D+T+F P       +  K +    K+R +F D G   L+C VC   L+G+K ALEHA+ TGHQNF
Sbjct:  124 VVRRVVDSDNSCLFNSIGYVLEGRDRKVGPRLRKIIVDTIASDPDEYNEAILGKTNTEYRNWLLKDTSWGGGIELSILADYYQCEISAFDIKTTKVYNYGEGKGYKQRVFLIYDGIHYDAMAFTFDPSFPEDMDITIFSPKDDAATNKAMKLVQEANKAR-EFTDTGGFSLRCGVCQTGLKGEKEALEHAKKTGHQNF 320          
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A2P6VPS1_9CHLO (Ubiquitin thioesterase OTU1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VPS1_9CHLO)

HSP 1 Score: 193 bits (490), Expect = 1.790e-52
Identity = 103/204 (50.49%), Postives = 130/204 (63.73%), Query Frame = 3
Query:  444 SVIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALA---ADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
            + + RRIID+DNSCLFNAVGY  +  RK+  +LR +I +AV G P  +NE +LGK P EYC+WI D   WGG IELSILS+ L   I   DIQT     YG+  G+ +R+ +IYDG+HYDALA A+   APES DVT    S P  E  MA A A   A  K+R QF D     L+C VC   L+G+K A+EHA+ +GH NF +
Sbjct:  187 TAVTRRIIDSDNSCLFNAVGYVTQHSRKLAPQLRQVIADAVLGDPFEWNEAVLGKEPAEYCRWIKDPSKWGGAIELSILSQHLKAEIAAFDIQTKRCDVYGQGAGYCERVMLIYDGLHYDALAVAAFHGAPESQDVTRLPSSGPRCEAVMAGAAALTEAAHKAR-QFTDTANFTLRCGVCQIGLKGEKEAVEHAKTSGHTNFSE 389          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1R6_ECTSI1.790e-13661.38Ubiquitin thioesterase OTU1 n=1 Tax=Ectocarpus sil... [more]
A0A835ZCY8_9STRA2.150e-7743.41Ubiquitin thioesterase OTU1 n=1 Tax=Tribonema minu... [more]
K8Z3P6_NANGC3.670e-7140.39Ubiquitin thioesterase OTU1 (Fragment) n=3 Tax=Mon... [more]
A0A6V1QB17_HETAK2.900e-6656.93Ubiquitin thioesterase OTU1 n=2 Tax=Heterosigma ak... [more]
I0YIJ5_COCSC6.640e-5748.62Ubiquitin thioesterase OTU1 n=1 Tax=Coccomyxa sube... [more]
E1ZSA6_CHLVA9.760e-5549.31Ubiquitin thioesterase OTU1 n=1 Tax=Chlorella vari... [more]
A0A1R2CMQ5_9CILI2.520e-5449.49Ubiquitin thioesterase OTU1 n=1 Tax=Stentor coerul... [more]
A0A2P6TG40_CHLSO1.240e-5350.46Ubiquitin thioesterase OTU1 n=1 Tax=Chlorella soro... [more]
A0A2P6NQK6_9EUKA8.570e-5348.48Ubiquitin thioesterase OTU1 n=1 Tax=Planoprotostel... [more]
A0A2P6VPS1_9CHLO1.790e-5250.49Ubiquitin thioesterase OTU1 n=1 Tax=Micractinium c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2697contigH-paniculata_contig2697:1277..4972 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.8
Seed ortholog evalue3.9e-113
Seed eggNOG ortholog2880.D7G1R6
KEGG koko:K13719,ko:K15083
KEGG Pathwayko04141,map04141
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0016579,GO:0016787,GO:0019538,GO:0019783,GO:0019941,GO:0023052,GO:0030163,GO:0030433,GO:0030968,GO:0033554,GO:0034620,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036459,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051603,GO:0051716,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0070887,GO:0071310,GO:0071704,GO:0101005,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698
EggNOG free text desc.protein K27-linked deubiquitination
EggNOG OGsCOG5539@1,KOG3288@2759
Ec32 ortholog descriptionOTU-like cysteine protease
Ec32 orthologEc-17_000230.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03400
Exons6
Model size1680
Cds size1050
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2697.7380.1prot_H-paniculata_contig2697.7380.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2697 1279..4344 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929810.3043349-UTR-H-paniculata_contig2697:1276..12781622929810.3043349-UTR-H-paniculata_contig2697:1276..1278Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2697 1277..1278 +
1691481021.0845256-UTR-H-paniculata_contig2697:1276..12781691481021.0845256-UTR-H-paniculata_contig2697:1276..1278Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2697 1277..1278 +
1622929810.4242017-UTR-H-paniculata_contig2697:4344..49721622929810.4242017-UTR-H-paniculata_contig2697:4344..4972Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2697 4345..4972 +
1691481021.159741-UTR-H-paniculata_contig2697:4344..49721691481021.159741-UTR-H-paniculata_contig2697:4344..4972Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2697 4345..4972 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929810.3259623-CDS-H-paniculata_contig2697:1278..16991622929810.3259623-CDS-H-paniculata_contig2697:1278..1699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 1279..1699 +
1691481021.0938385-CDS-H-paniculata_contig2697:1278..16991691481021.0938385-CDS-H-paniculata_contig2697:1278..1699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 1279..1699 +
1622929810.3391833-CDS-H-paniculata_contig2697:2013..21831622929810.3391833-CDS-H-paniculata_contig2697:2013..2183Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 2014..2183 +
1691481021.1013129-CDS-H-paniculata_contig2697:2013..21831691481021.1013129-CDS-H-paniculata_contig2697:2013..2183Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 2014..2183 +
1622929810.3634644-CDS-H-paniculata_contig2697:2603..26991622929810.3634644-CDS-H-paniculata_contig2697:2603..2699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 2604..2699 +
1691481021.1086156-CDS-H-paniculata_contig2697:2603..26991691481021.1086156-CDS-H-paniculata_contig2697:2603..2699Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 2604..2699 +
1622929810.3858273-CDS-H-paniculata_contig2697:3082..31971622929810.3858273-CDS-H-paniculata_contig2697:3082..3197Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 3083..3197 +
1691481021.1168573-CDS-H-paniculata_contig2697:3082..31971691481021.1168573-CDS-H-paniculata_contig2697:3082..3197Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 3083..3197 +
1622929810.4013033-CDS-H-paniculata_contig2697:3514..36331622929810.4013033-CDS-H-paniculata_contig2697:3514..3633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 3515..3633 +
1691481021.1282651-CDS-H-paniculata_contig2697:3514..36331691481021.1282651-CDS-H-paniculata_contig2697:3514..3633Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 3515..3633 +
1622929810.4136343-CDS-H-paniculata_contig2697:4215..43441622929810.4136343-CDS-H-paniculata_contig2697:4215..4344Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 4216..4344 +
1691481021.1369426-CDS-H-paniculata_contig2697:4215..43441691481021.1369426-CDS-H-paniculata_contig2697:4215..4344Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2697 4216..4344 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2697.7380.1

>prot_H-paniculata_contig2697.7380.1 ID=prot_H-paniculata_contig2697.7380.1|Name=mRNA_H-paniculata_contig2697.7380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp
MQLKAGFPPQDVSGSETDPVVKLGITSGSALTVLERKETAAPAAQLPATG
AAASPSPAAALPSAAPASRTAFSSHARLPQPPPQPQSGGELHEMLRSLVD
MGFPEAQAARALKAAGGDMITAVEMCMGGDPSAFASQTAPAAPVAPPSVI
IRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGIL
GKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEE
GGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKA
LAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQI*
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mRNA from alignment at H-paniculata_contig2697:1277..4972+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2697.7380.1 ID=mRNA_H-paniculata_contig2697.7380.1|Name=mRNA_H-paniculata_contig2697.7380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3696bp|location=Sequence derived from alignment at H-paniculata_contig2697:1277..4972+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCATGCAACTCAAGGCAGGGTTCCCGCCTCAAGACGTGTCTGGATCAGAA ACCGATCCGGTAGTGAAGCTAGGTATCACATCCGGGAGCGCTCTGACTGT ACTTGAACGAAAAGAGACTGCAGCCCCCGCAGCCCAACTGCCTGCAACTG GTGCGGCAGCATCACCGTCACCAGCTGCGGCCCTGCCATCGGCCGCGCCC GCGTCGAGGACGGCGTTTTCCTCTCATGCCCGGTTACCTCAACCTCCTCC TCAGCCACAATCGGGAGGGGAACTACATGAAATGTTGCGGTCTCTAGTGG ATATGGGATTTCCTGAAGCGCAAGCGGCCAGAGCGTTGAAGGCGGCTGGC GGTGACATGATCACCGCCGTTGAGATGTGCATGGGGGGCGACCCCTCTGC ATTCGCTAGCCAAACTGCGCCAGGTAGGATGATGCGAAACGCCGTATTTC GTTGGTGGGGGTAGGAGGCGATCTATGGCAAGATTTCTACTAAGGAGGGA AACGCAGTGGTGTGTTGCACTTCTTGAAGATCGGATCGCCATAGCTTTGT GATCGTTCAAGCCCTCTCCCCCTTCGAGACATTTTTAGAAGTACGAGCAA CTTGTCAGTTCCCTTACGAAAGCAAGTTATTGCCGACACCACCTGACTCG TGCCTACTTTATTCATTTCTCTCAATTGCCCTCTCTCCTGCCCTCTCGCT CTTGCTCTCGCTCTGGCTTACCCAATCTTGATACCAGCGGCGCCAGTGGC ACCACCTAGCGTGATAATCCGAAGAATCATTGACGCCGACAATTCCTGCC TTTTCAACGCCGTGGGGTACGCGCTGCGGCGAAAGCGCAAAGTCGGGTCG GAGCTACGTTTAATGATTACTGAAGCTGTGCGAGGCAGCCCGGACGTTTA CAATGAGGCAAGGTGGACGAATACAGAGCTCCATCAACATATCGCAGTTA GTGGTTATTTGCTGCGATTGCGAGACGCGATTAGCCTCCAAGGCCGAGCC AAACTTCCCGAGCATCCTAGGGATGTATGTCATGTCTGGCTGTGTATGTG GTTCTACATCGAGGCCATCCCATCTAGGCAACATGCTTAACATACGCCCG GGAGAAGAGACTGCCGCGTTCGGGTCCAGTATCGGCTTGCACTTAGTTGA CCTGTTGTCCGAAAAACTCTCGCCTTTTAAGGGCTTTATAACAAAATAGT TTTGTACCAAGTGTTAGAATGTCTGTTGGAAGCCTTTTCCTAAATCCGTA ACCCTGTTCCTCACCTCCAAGTTTGCGTTTACAGCGAATTCCTTCACTTA CCATGTCTAGTGTTCTTATGTCCTCAGGGTATTTTGGGAAAAAGTCCCGA AGAATACTGCAAGTGGATTTTGGATACAAAGAGCTGGGGAGGAGAGATTG AGCTGTCTATTCTCTCGAAGAAGGTAGGCTTGGGGTGTTTTGCATTCATT TTGAAAAAATCAAGGAAGTCTAATCCTGGTTTTGGCGCTTATCCAACAGA GAGGCAACCGAGAGAGTATGACGCCTCGAAACAGCTTATGATTCGCACTC GCCGCGTTCGGTTTGATGCCCACGACATTATCGCTTGAAGGTCAAGGGCA CCGTCAAGGAAAACAACCCCAGTCTCATGTATTAGTTGAAAGCATTGTTT GCTGCATCATCCTCATTTTTGCACAGATTTCGTGTTGCGTTATTCACACA TCGAATAAAATTAGTGAACCGCCGCCGCCGTTGTTGCCCGTGTATCCGTT TGCCACATGTTTCTCCGCACCGGGTCTGCACACTCGATGTGTATGCGTTG CTGTAGCTGGCGGTGATGATCACGGTGGTAGACATCCAAACCAACAACGC TTACTCCTATGGCGAAGAGGGCGGTTTCGTCAAGCGTATTTTCGTCATAT ACGACGGCGTGCATTACGATGGTGAGTGATGTGTTTCACTCTACCATACG CAGTCTTTATTCAGCTTGATGCGGTTTTTACCACATGACATATGCATTGC TTCAGCTGCATCCACGCCTGTTTTGAAGCTGTTTTTATTTCGATAAAAAA TAGAAGGATTTTTCTCCCTTACTTTTACGATCCTTAGTCGGTGTTTTCAT GAACCGATCGATCATCGTTAAACACGCTAGCTCGTTTGCCGTGAGGATGG CAATTCAACGCGACCGCTACCGTCTCCTAGCCCCTCCTCCCTATTTTCCT CGCTGCCTCCTCACTTGAATTCATGTTCAACAACGCAGCACTGGCGCAAG CCAGTGACGAGAGCGCGCCGGAATCAGACGATGTCACTGTGTTTGATCCC TCCGCCCCTGGAAAGGAACTGGAGATGGCTAAGGCGTTGGCTGCCGACCT CAAGTCGGTACGTCTGTCATCGTTTGGGTTGCACATGTTACCAAATTATC ACAACCCACGCCGACTGTTGCTGCGGAGTTTTCGTTGCCAGTCGTGGCGG AGCTTAAAACAGCTAAAACGGTAAAATGCTTAGCCCCGTCAACTACACTT ATGAGAAGCTGCGCAGAAACTTACCATGCATCCCCCGACCTCTGGCCTCA GGGGTTCCGGACGGTGTGGTTGCCACGTAGACCCATCCCTTGGTTGTTGC TAGAGACGGCAGCTCTGATAGCGTGTAAGGTTCTGCCGCGTGGTTTCTCT CTTTTCACCATTCCCAATGAGCTGCCCCTCATAGAGATGATCCGCGCAGG ATTGCCGTCTTCATCAACGTTATCTAGTGGTACTTTTTGGGAGTTGCAGC TGTGAAGGCTCCGTTTATCTCCCTAACAATAGTTCCCATTACCTTTTTTT TCGGTGTATACTTCTCGCCGTCTCTCTGACGATAATGGAAAGTCATTCTG ACCTTAAAGCCTCGCATCAAACTGTTCCCTTTTCACACTTCGCGTGCATA TCGGTACCCCTTGCTTCTCTGTCCGTTCCTGCCCTACAGAGGAATCAGTT CATAGACATGGGCGCTTGCGACCTCAAGTGCATGGTATGTCTCAAATTGC TTGAAGGACAGAAGGGGGCCCTCGAGCACGCCAGAGCAACGGGCCACCAA AATTTCGGACAGATCTGATAAGAGTACCAACGGCTGTCCGTAGACTTGAT CAGGAGACGTGGAGTACTGCAGATAGTATTTGGTGATGAGGCAAGGCATG AGTTCGACCTGTGAGCTTCAAGTTAGAGCCGATGATCTGTGCCGAAGTGA CCTGATTTCGGTAGTTCTTCGCGAGGGGTGTGGCCGTCAGCCACAGCAAT GTTCGCCGTCAAGTATTAATCCTCGGTATGGGGTGAACAAATATTCCGCG CGGAAGAAGCTGTGCATTTGTTTGTGTAGCGGGTGCTGTTCTCGAGGGAT ATGGTGCCTGAGAAGGGTGTCCAAGGGTAGCAGAAGTTACGCTATCTGTA GAACAGCGACACACCCCTCGGTTACATAGCAGGGAGCACGACTTGCTTAC ACAGAGTCTAATGTACACTTGAGATTTCTTGAGGGGTTCTTCGTTTTGCG ATTTGGCAATAGCTGTCAAGAGGGGGTGTCGAGTGATGACAATGATTCGG CTTGGTTCGAGCCACGGCGACACTTGCCTCCCCCCTCTCCGTCAGACTTC TTCCATTTCTCTATTTGCTTGCTCGCTGGGCTAGGTGCAATGAATCCTTC ACACACTGCCAACCAACTTTATATTTTTATATGAAAATAGGTGAAA
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Coding sequence (CDS) from alignment at H-paniculata_contig2697:1277..4972+

>mRNA_H-paniculata_contig2697.7380.1 ID=mRNA_H-paniculata_contig2697.7380.1|Name=mRNA_H-paniculata_contig2697.7380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig2697:1277..4972+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAACTCAAGGCAGGGTTCCCGCCTCAAGACGTGTCTGGATCAGAAAC
CGATCCGGTAGTGAAGCTAGGTATCACATCCGGGAGCGCTCTGACTGTAC
TTGAACGAAAAGAGACTGCAGCCCCCGCAGCCCAACTGCCTGCAACTGGT
GCGGCAGCATCACCGTCACCAGCTGCGGCCCTGCCATCGGCCGCGCCCGC
GTCGAGGACGGCGTTTTCCTCTCATGCCCGGTTACCTCAACCTCCTCCTC
AGCCACAATCGGGAGGGGAACTACATGAAATGTTGCGGTCTCTAGTGGAT
ATGGGATTTCCTGAAGCGCAAGCGGCCAGAGCGTTGAAGGCGGCTGGCGG
TGACATGATCACCGCCGTTGAGATGTGCATGGGGGGCGACCCCTCTGCAT
TCGCTAGCCAAACTGCGCCAGATGCAACTCAAGGCAGGGTTCCCGCCTCA
AGACGTGTCTGGATCAGAAACCGATCCGGTAGTGAAGCTAGGTATCACAT
CCGGGAGCGCTCTGACTGTACTTGAACGAAAAGAGACTGCAGCCCCCGCA
GCCCAACTGCCTGCAACTGGTGCGGCAGCATCACCGTCACCAGCTGCGGC
CCTGCCATCGGCCGCGCCCGCGTCGAGGACGGCGTTTTCCTCTCATGCCC
GGTTACCTCAACCTCCTCCTCAGCCACAATCGGGAGGGGAACTACATGAA
ATGTTGCGGTCTCTAGTGGATATGGGATTTCCTGAAGCGCAAGCGGCCAG
AGCGTTGAAGGCGGCTGGCGGTGACATGATCACCGCCGTTGAGATGTGCA
TGGGGGGCGACCCCTCTGCATTCGCTAGCCAAACTGCGCCAGCGGCGCCA
GTGGCACCACCTAGCGTGATAATCCGAAGAATCATTGACGCCGACAATTC
CTGCCTTTTCAACGCCGTGGGGTACGCGCTGCGGCGAAAGCGCAAAGTCG
GGTCGGAGCTACGTTTAATGATTACTGAAGCTGTGCGAGGCAGCCCGGAC
GTTTACAATGAGCGGCGCCAGTGGCACCACCTAGCGTGATAATCCGAAGA
ATCATTGACGCCGACAATTCCTGCCTTTTCAACGCCGTGGGGTACGCGCT
GCGGCGAAAGCGCAAAGTCGGGTCGGAGCTACGTTTAATGATTACTGAAG
CTGTGCGAGGCAGCCCGGACGTTTACAATGAGGGTATTTTGGGAAAAAGT
CCCGAAGAATACTGCAAGTGGATTTTGGATACAAAGAGCTGGGGAGGAGA
GATTGAGCTGTCTATTCTCTCGAAGAAGGGTATTTTGGGAAAAAGTCCCG
AAGAATACTGCAAGTGGATTTTGGATACAAAGAGCTGGGGAGGAGAGATT
GAGCTGTCTATTCTCTCGAAGAAGCTGGCGGTGATGATCACGGTGGTAGA
CATCCAAACCAACAACGCTTACTCCTATGGCGAAGAGGGCGGTTTCGTCA
AGCGTATTTTCGTCATATACGACGGCGTGCATTACGATGCTGGCGGTGAT
GATCACGGTGGTAGACATCCAAACCAACAACGCTTACTCCTATGGCGAAG
AGGGCGGTTTCGTCAAGCGTATTTTCGTCATATACGACGGCGTGCATTAC
GATGCACTGGCGCAAGCCAGTGACGAGAGCGCGCCGGAATCAGACGATGT
CACTGTGTTTGATCCCTCCGCCCCTGGAAAGGAACTGGAGATGGCTAAGG
CGTTGGCTGCCGACCTCAAGTCGCACTGGCGCAAGCCAGTGACGAGAGCG
CGCCGGAATCAGACGATGTCACTGTGTTTGATCCCTCCGCCCCTGGAAAG
GAACTGGAGATGGCTAAGGCGTTGGCTGCCGACCTCAAGTCGAGGAATCA
GTTCATAGACATGGGCGCTTGCGACCTCAAGTGCATGGTATGTCTCAAAT
TGCTTGAAGGACAGAAGGGGGCCCTCGAGCACGCCAGAGCAACGGGCCAC
CAAAATTTCGGACAGATCTGAAGGAATCAGTTCATAGACATGGGCGCTTG
CGACCTCAAGTGCATGGTATGTCTCAAATTGCTTGAAGGACAGAAGGGGG
CCCTCGAGCACGCCAGAGCAACGGGCCACCAAAATTTCGGACAGATCTGA
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