mRNA_H-paniculata_contig2697.7380.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: D7G1R6_ECTSI (Ubiquitin thioesterase OTU1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R6_ECTSI) HSP 1 Score: 410 bits (1055), Expect = 1.790e-136 Identity = 232/378 (61.38%), Postives = 268/378 (70.90%), Query Frame = 3
Query: 6 QLKAGFPPQDVSGSETDPVVKLGITSGSALTVLERKETAAPAAQLPATGAAASPSPAAALPSAAPASRTAFSSH--------ARLPQPP------------------PQPQSGGELH---EMLRSLVDMGFPEAQAARALKAAGGDMITAVEMCMGGDPSAFASQTAPAAPVAPPS-VIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQI 1049
QLKAGFPP+DVSGS+ DPVV LGITSGSALTVLERK AP S + +P PP PQ Q E +++SLVDMGF + AA+AL+ AGGD+ TAVE+CM GDP+A S + AA A + +++RRIIDADNSCLFNAVGYALRRKRKVG+ELR MITEAVRGSP+VYNEGILGK PEEYC WI D KSWGGEIELSILSKKL VMITVVDIQTNNAYSYGEE GF +R+F+IYDG+HYDALA+A++E+APESDDVTVF+PS KE+ +AK +AADLK+RNQ+ DMG LKCMVC KLL G+KGALEHARATGHQNFGQ+
Sbjct: 46 QLKAGFPPKDVSGSDADPVVSLGITSGSALTVLERK---------------------------APPSXXXXXXXXXXXXXXXSSVPSPPSXXXXXXXXXXXXXXXXXPQLQRRQEPAVDPALVQSLVDMGFEQGFAAKALEVAGGDINTAVEICMSGDPAALGSDSGRAASTATAARIMVRRIIDADNSCLFNAVGYALRRKRKVGTELRQMITEAVRGSPEVYNEGILGKQPEEYCNWISDPKSWGGEIELSILSKKLVVMITVVDIQTNNAYSYGEEHGFGRRLFIIYDGIHYDALAEAANETAPESDDVTVFNPSEKEKEI-LAKTVAADLKARNQYTDMGNASLKCMVCFKLLAGEKGALEHARATGHQNFGQV 395
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A835ZCY8_9STRA (Ubiquitin thioesterase OTU1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY8_9STRA) HSP 1 Score: 259 bits (661), Expect = 2.150e-77 Identity = 158/364 (43.41%), Postives = 213/364 (58.52%), Query Frame = 3
Query: 9 LKAGFPPQDVSGSETDPVVKLGITSGSALTVLERKETAAPAAQLPATGAAASPSPAAALPSAAPASRTAFSSHARLPQPPPQPQSGGELHE--MLRSLVDMGFPEAQAARALKAAGGDMITAVEMCMGGD------PSAFASQTAPA-------APVAPPSVIIRRIIDADNSCLFNAVGYALRRKR--KVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQI 1049
+ +GFPP++V+G + LGIT+GSA++V + TA P A PAAA P H + L+DMGF A AA+AL+ AGGD A+E+C+ G S AS T A A + +RR++DADNSCLF +VGY + R+R K G +R +IT+AVR +PD ++E ILG PE YC WI++ + WGGEIEL +LS + I VVDI T Y YGE+ G+ +RIF++YDGVHYDA+A+A +APE D T FD + K +E AK++AA+LK + Q++D+ CDLKC+VC K L+GQKGA +HA AT HQNFGQI
Sbjct: 51 ILSGFPPKEVAGGTDAAITALGITNGSAVSVAQ-STTATPDA------------PAAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHPGAATKDLIDMGFSPAVAAKALQLAGGDAAAAIELCLSGGLDDRDIASDIASGTGSANATGNNSATLEHRPTFVRRVVDADNSCLFTSVGYCVTRERGEKGGGRMRRVITQAVRAAPDTFSEAILGMQPEAYCGWIMNPEKWGGEIELVVLSDHYKLEICVVDIATGRTYLYGEDKGYSQRIFLLYDGVHYDAMAEAFSPNAPEDLDTTRFDITDDAK-VEAAKSVAAELKRQKQYVDLAGCDLKCLVCGKGLQGQKGARDHAVATRHQNFGQI 400
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: K8Z3P6_NANGC (Ubiquitin thioesterase OTU1 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3P6_NANGC) HSP 1 Score: 241 bits (616), Expect = 3.670e-71 Identity = 145/359 (40.39%), Postives = 209/359 (58.22%), Query Frame = 3
Query: 6 QLKAGFPPQDVSGSE-TDPVVKLGITSGSALTVLERKETAAPAAQLPATGAAASPSPAAALPSAAPASRTAFSSHARLPQPPPQPQSGGELHEMLRSLVDMGFPEAQAARALKAAGGDMITAVEMCMGG---DPSAFASQTAPAAPVAPPS-------VIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDE-SAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
+L+AGFPP+D++ + T + LGI +GSA+TV++ T +S + P P P + + ++DMGF A A +AL+ + G++ A+++C+ G D S TAP PV V++RR+IDADNSCLFNAVGY + + R++G +LR +I + VR SPDVY E +LGK+P++Y WI D WGGEIEL ILS+ + ++I++ +AY YGE + +RI+++YDGVHYDALA A+ +APES D+T F P+ + A A+AA+LK QF+D+ C L+CMVC K L GQ+ AL HAR T HQNFG+
Sbjct: 46 KLRAGFPPKDMTLQDLTAELTSLGIQTGSAITVVKED--------------------------------TQVTSGDKAPIPVTLPGA--------QQIIDMGFSVAVALKALEVSHGEVENALDLCVNGIITDESLEHVPTAPPVPVTSHGGMTTANRVMVRRVIDADNSCLFNAVGYCMEKNRRIGPKLRKIIADCVRNSPDVYTEAVLGKAPKQYSDWIQDPAQWGGEIELFILSQYYGCEVVAIEIKSAHAYVYGEGKNYSRRIYLLYDGVHYDALAMAAGSPTAPESLDMTQF-PAGDESSKQAALAVAAELKEGRQFVDLLGCTLRCMVCNKGLSGQEEALLHARETNHQNFGE 363
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A6V1QB17_HETAK (Ubiquitin thioesterase OTU1 n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QB17_HETAK) HSP 1 Score: 223 bits (568), Expect = 2.900e-66 Identity = 115/202 (56.93%), Postives = 141/202 (69.80%), Query Frame = 3
Query: 453 IRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASD---ESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQI 1049
+RR+IDADNSCLFNAVGY R RK LR +I V G+PD + E ILGK P EY WI D + WGGEIEL+IL + A I VVDIQ+ N Y YG E F +R F++YDGVHYDA+A+A + E E DVTVFD S + + A +AA+LK+RNQF+++ CDLKC+VC + L+GQ GALEHARAT HQNFGQI
Sbjct: 6 VRRVIDADNSCLFNAVGYVFERNRKAAPRLRRLIANTVLGNPDKWTEAILGKPPHEYQSWIQDPQKWGGEIELAILCQFFASEIVVVDIQSLNTYKYGSE--FNQRAFLLYDGVHYDAMAEALESQGEKKSEDTDVTVFDSSDESR-ISAALDVAAELKARNQFVNLAGCDLKCLVCGRGLKGQAGALEHARATSHQNFGQI 204
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: I0YIJ5_COCSC (Ubiquitin thioesterase OTU1 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YIJ5_COCSC) HSP 1 Score: 199 bits (506), Expect = 6.640e-57 Identity = 106/218 (48.62%), Postives = 140/218 (64.22%), Query Frame = 3
Query: 417 APAAPVAPP----SVIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRN----QFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
AP A VA P SV++RR++ +DNSCLFNAVGY + R R S LR +I E V G P+ Y+E LGK +EYC WI D + WGG IELSILS+ I D+QT YG++ G+ +R+ +IYDG+HYDALA A+ E APE D+T+FD G E + AA+L +++ QF D L+C VC ++G+K ALEHA+ATGHQNFG+
Sbjct: 4 APPASVAVPGGSGSVVVRRVVASDNSCLFNAVGYVVERSRDKASHLRRVIAETVAGDPEEYSEAFLGKPNKEYCAWIKDPQKWGGAIELSILSRYFGREIAAYDVQTKRCDVYGQDAGYEERVMLIYDGLHYDALAVAAFEGAPEDVDITMFDTH--GSEADSIGRAAAELVAKSHEARQFTDTANFTLRCGVCQLGVKGEKEALEHAKATGHQNFGE 219
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: E1ZSA6_CHLVA (Ubiquitin thioesterase OTU1 n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZSA6_CHLVA) HSP 1 Score: 196 bits (498), Expect = 9.760e-55 Identity = 107/217 (49.31%), Postives = 135/217 (62.21%), Query Frame = 3
Query: 405 ASQTAPAA-PVAPPSVIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEM--AKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
A Q AP A +A + ++RRIID+DNSCLFNAVGY R RK+ LR +I +AV P +NE +LGK P EYC+WI D WGG IELSILS+ L I DIQT YG+ G+ +R+ +IYDG+HYDALA A+ E APE DVTV S E+ M AK LA ++ F D L+C VC L+G+K A+EHA+ TGH NF +
Sbjct: 79 AQQGAPTAVALADGTAVVRRIIDSDNSCLFNAVGYVTERSRKLAPRLRQVIADAVLADPFEWNEAVLGKEPAEYCRWIKDPNKWGGAIELSILSRHLGREIAAFDIQTTRVDIYGQGSGYSERVMLIYDGLHYDALAVAAFEGAPEQLDVTVIPTSGTRTEMVMQGAKQLATKAQTARAFTDTANFTLRCGVCQIGLKGEKEAVEHAKTTGHTNFSE 295
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A1R2CMQ5_9CILI (Ubiquitin thioesterase OTU1 n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CMQ5_9CILI) HSP 1 Score: 195 bits (495), Expect = 2.520e-54 Identity = 98/198 (49.49%), Postives = 138/198 (69.70%), Query Frame = 3
Query: 450 IIRRIIDADNSCLFNAVGYALR-RKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNF 1040
++RRII ADNSCLFN++ YAL R +K G+ LR +I+ + PD YN+ +LGKS +EY WI SWGG IELSILSK +MI V IQT + +G+E G++K I+VIYDG+HYD LA+ S + APES+DVT+FD + + + A ++A +LK +Q+ D+G L+C +C L G++GA++HA+ TGHQNF
Sbjct: 93 LVRRIIAADNSCLFNSIAYALETRNKKSGTFLRNVISAYIESDPDTYNKTLLGKSNQEYVSWIEQESSWGGGIELSILSKYYQIMIGAVSIQTAHVDIFGQEDGYMKIIYVIYDGIHYDVLAKTSGDDAPESEDVTIFD-AGDIETYQQALSIANELKIAHQYTDVGNFTLRCGICYIGLVGERGAIQHAQDTGHQNF 289
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A2P6TG40_CHLSO (Ubiquitin thioesterase OTU1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TG40_CHLSO) HSP 1 Score: 196 bits (499), Expect = 1.240e-53 Identity = 109/216 (50.46%), Postives = 139/216 (64.35%), Query Frame = 3
Query: 411 QTAPAA-PVAPPSVIIRRIIDADNSCLFNAVGY-ALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEM--AKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
Q AP A P+ + ++RRIID+DNSCLFNAVGY AL R RK LR +I +AV P +NE +LGK P EYC+WI D+ WGG IELSILS+ L I DI T YG++ G+ +R+ +IYDG+HYDALA A+ E APES D TV S ++ M A+ LAA K+ QF D L+C VC L+G+K A+EHA+ATGH NF +
Sbjct: 187 QGAPTAVPLPDGTAVVRRIIDSDNSCLFNAVGYVALGRTRKEAPRLRQVIADAVLADPFEWNEAVLGKEPAEYCRWIKDSNKWGGAIELSILSRHLQREIAAFDISTLRCDIYGQDSGYSERVLLIYDGLHYDALAVAAFEGAPESRDTTVIPSSGARTDVVMEGARQLAAKAKAARQFTDTSNFTLRCGVCQIGLKGEKEAVEHAKATGHTNFSE 402
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A2P6NQK6_9EUKA (Ubiquitin thioesterase OTU1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NQK6_9EUKA) HSP 1 Score: 192 bits (487), Expect = 8.570e-53 Identity = 96/198 (48.48%), Postives = 128/198 (64.65%), Query Frame = 3
Query: 450 IIRRIIDADNSCLFNAVGYALR-RKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALAADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNF 1040
++RR++D+DNSCLFN++GY L R RKVG LR +I + + PD YNE ILGK+ EY W+L SWGG IELSIL+ I+ DI+T Y+YGE G+ +R+F+IYDG+HYDA+A D S PE D+T+F P + K + K+R +F D G L+C VC L+G+K ALEHA+ TGHQNF
Sbjct: 124 VVRRVVDSDNSCLFNSIGYVLEGRDRKVGPRLRKIIVDTIASDPDEYNEAILGKTNTEYRNWLLKDTSWGGGIELSILADYYQCEISAFDIKTTKVYNYGEGKGYKQRVFLIYDGIHYDAMAFTFDPSFPEDMDITIFSPKDDAATNKAMKLVQEANKAR-EFTDTGGFSLRCGVCQTGLKGEKEALEHAKKTGHQNF 320
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Match: A0A2P6VPS1_9CHLO (Ubiquitin thioesterase OTU1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VPS1_9CHLO) HSP 1 Score: 193 bits (490), Expect = 1.790e-52 Identity = 103/204 (50.49%), Postives = 130/204 (63.73%), Query Frame = 3
Query: 444 SVIIRRIIDADNSCLFNAVGYALRRKRKVGSELRLMITEAVRGSPDVYNEGILGKSPEEYCKWILDTKSWGGEIELSILSKKLAVMITVVDIQTNNAYSYGEEGGFVKRIFVIYDGVHYDALAQASDESAPESDDVTVFDPSAPGKELEMAKALA---ADLKSRNQFIDMGACDLKCMVCLKLLEGQKGALEHARATGHQNFGQ 1046
+ + RRIID+DNSCLFNAVGY + RK+ +LR +I +AV G P +NE +LGK P EYC+WI D WGG IELSILS+ L I DIQT YG+ G+ +R+ +IYDG+HYDALA A+ APES DVT S P E MA A A A K+R QF D L+C VC L+G+K A+EHA+ +GH NF +
Sbjct: 187 TAVTRRIIDSDNSCLFNAVGYVTQHSRKLAPQLRQVIADAVLGDPFEWNEAVLGKEPAEYCRWIKDPSKWGGAIELSILSQHLKAEIAAFDIQTKRCDVYGQGAGYCERVMLIYDGLHYDALAVAAFHGAPESQDVTRLPSSGPRCEAVMAGAAALTEAAHKAR-QFTDTANFTLRCGVCQIGLKGEKEAVEHAKTSGHTNFSE 389 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2697.7380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2697.7380.1 >prot_H-paniculata_contig2697.7380.1 ID=prot_H-paniculata_contig2697.7380.1|Name=mRNA_H-paniculata_contig2697.7380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=350bp MQLKAGFPPQDVSGSETDPVVKLGITSGSALTVLERKETAAPAAQLPATGback to top mRNA from alignment at H-paniculata_contig2697:1277..4972+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2697.7380.1 ID=mRNA_H-paniculata_contig2697.7380.1|Name=mRNA_H-paniculata_contig2697.7380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3696bp|location=Sequence derived from alignment at H-paniculata_contig2697:1277..4972+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2697:1277..4972+ >mRNA_H-paniculata_contig2697.7380.1 ID=mRNA_H-paniculata_contig2697.7380.1|Name=mRNA_H-paniculata_contig2697.7380.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2100bp|location=Sequence derived from alignment at H-paniculata_contig2697:1277..4972+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |