mRNA_H-paniculata_contig267.7295.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: D8LS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS35_ECTSI) HSP 1 Score: 189 bits (480), Expect = 2.560e-50 Identity = 92/147 (62.59%), Postives = 118/147 (80.27%), Query Frame = 1
Query: 1 KMQNKIQVLSSKDMFWEALGLKLKAHAESFGEASCRAEVASEEQDRYVLPIELQQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDTRMALEKKCPAHGSFCTRNRERFFLKVEQGLK 441
K++ + VLSS+D+FWE +G KLKAHAE+F +ASCR E SEEQDR+VL +ELQQY+AGNTQRVAKL+ Q+ADFEV IQKLT + N+E+G DWDRRVQ+MRG+FL F+ + R L++K P+HG F RNR+RFF+K+EQGLK
Sbjct: 576 KLERSLFVLSSRDLFWEEVGTKLKAHAEAFADASCRVEATSEEQDRFVLTVELQQYIAGNTQRVAKLICQKADFEV----IQKLTASTNIEKGAQDWDRRVQSMRGSFLEHFVANARRYLDRKYPSHGPFGARNRDRFFVKLEQGLK 718
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: A0A836CLL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL5_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.140e-27 Identity = 106/324 (32.72%), Postives = 146/324 (45.06%), Query Frame = 1
Query: 1 KMQNKIQVLSSKDMFWEALGLKLKAHAESFGEASCRAEVASEEQDR--------------------YVLPIELQQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDTRMALEKKCPAHGSFCTRNRERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKL-DPVCIACDRPFGPASQ-------ATPGDSRAATLDLLPAARSTKYSVASRSRLPITPLDGSLSTSIHLPEPFLDTAATSGGGV--------------------GFGGRP-----------KSAKFVYRGGFKIPR 795
+++ Q L+SK +FWE+ +KL AH E S + E A+ ++ P L+ +AGNTQRVAKL+A +AD+EV I+ ++ A + G DWD RV+T+RG FL F D R L K+ P G R RF +V+ L+ A+SKYR G TLFG+V++ C+ACDRPF A+ A PG + AA P A T+ S+A R+ + GS SGGGV GFG K +VYRGGFK+P+
Sbjct: 726 RVETAFQSLASKGLFWESTDIKLAAHVEEVARVSLQVEAAAXXXXXXXXXXXXXXXXXXSAPPGAPHLAPDALR-VLAGNTQRVAKLIAAKADYEV----IRLVSRAEDPGAEGHDWDARVETLRGAFLAQFSADARNVLRKRAPHQGPAAEAARGRFLARVDGALRVALSKYRPTTPGATLFGRVRVVAQACVACDRPFATAADGLPCAVSAPPGGNHAAAK---PPALPTETSIAVRNNFRPSTCTGS-------------PTKRSGGGVEVNGDDGDVESEVPLHVAPFGFGXXXXXXXXXXSDVQKPQAYVYRGGFKLPK 1028
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: A0A7S3USE9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USE9_HETAK) HSP 1 Score: 115 bits (288), Expect = 2.250e-26 Identity = 71/199 (35.68%), Postives = 109/199 (54.77%), Query Frame = 1
Query: 7 QNKIQVLSSKDMFWEALGLKLKAHAESFGEASCRAEVASEEQDRYVLPIELQQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDTRMALEKKCPAHGSFCTRNRERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKLD-PVCIACDRPFGPASQATPGDSRAATLDLLPA 600
+ +++ ++SK +FWEAL +L+AH + FG+ C E S + L E Q+Y+AGN QRVAKL+ Q+ADFE I++++ + + E DWD +V +R + F K+ + + R RF K++Q ++ A+SK+ + G TLFGK P C+ACDRPF S PG + AA + L A
Sbjct: 53 EGQVRAIASKSLFWEALQARLQAHLKGFGDRCCELEANSSAAHAFSLSPEAQRYLAGNAQRVAKLVGQRADFET----IRQVSTSRHPE--DEDWDTKVDQLRQKYRAEFTQGVEAYAAKQHRSGDTVVLDTRRRFLAKLDQAVRLALSKFNKVQPGLTLFGKRSAQVPACMACDRPF--TSDPGPGLAGAADPNTLAA 243
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: D8LLI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI9_ECTSI) HSP 1 Score: 114 bits (284), Expect = 8.830e-24 Identity = 96/271 (35.42%), Postives = 132/271 (48.71%), Query Frame = 1
Query: 1 KMQNKIQVLSSKDMFWEALGLKLKAHAESFGEASCRAEVAS-EEQDRYVLPIELQQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDTRMALEKKCP-AHGSFCTRN-RERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKLDPVCIACDRPFGPASQATPGD-SRAATLDLLPAARSTKYSVASRSRLPITPLDGSLSTSIHLPEPFLDTAATSGGGVGFGGRPKSAKFVYRGGFKIPREL 801
KM+ + LS+KD+FW+A+ +KL AH + GE E A+ + R L E Q +AG+ QRVAKL+A +AD+EV I++L E+ G DWD RV+ +R +R FL D R AL+K P +F R +F K+ LK A+SKY G TLFGK+KL I D S G SR+ +++L S+ +SV S SR +S H P VYRGGFK+P+ L
Sbjct: 697 KMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDVEDATVSRRSRITLSKEAQACLAGDMQRVAKLMAVKADYEV----IRELAKLDTPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGEEIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLKNSHITKDTFRPHTSHGRLGSPSRSGSIELFEP-HSSIHSVMSGSR-----------SSSHSPH------------------------VYRGGFKLPKHL 927
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: D7G4P4_ECTSI (Myosin-like antigen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P4_ECTSI) HSP 1 Score: 102 bits (255), Expect = 3.070e-20 Identity = 64/196 (32.65%), Postives = 101/196 (51.53%), Query Frame = 1
Query: 1 KMQNKIQVLSSKDMFWEALGLKLKAHAESFGEASCRAEVASEEQDRYVLPIELQQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDTRMALEKKCPAHGSFCTRNRERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKLDPVCIACDRPFGPASQATPGDSRAATLD 588
++Q + L++K+ W+ L ++ K H + G E A+ + + L +Q++V+ +Q VAK++A +AD+EVT + + + DWDR+V+ +R F+ F+ D K P RE F K+E +K A+SKY+ I G T+ GKV L P C+ACDRPF PGD R+ D
Sbjct: 167 RLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEPFSLGPAMQKHVSAVSQMVAKIVATRADYEVTRQAVNRKNPGED-----SDWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRPVEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHLLPSCMACDRPF--IDNPGPGDPRSVVQD 355
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: A0A7S1XP55_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XP55_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.310e-18 Identity = 82/275 (29.82%), Postives = 129/275 (46.91%), Query Frame = 1
Query: 1 KMQNKIQVLSSKDMFWEALGLKLKAHAESFGEASCRAEVAS--EEQDRYVLPIELQQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDT--RMALEKKCPAHGSFCTRNRERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKLDPVCIACDRPFGPASQATPGDSRAATLDLLPAARSTKYSVASRSRLPITPLDGSLST---SIHLPEPFLDTAATSGGGVGFGGRPKSAKFVYRGGFKIPRELT 804
K+ + +L +K E + +L+A + +E S E ++ L EL+ +A TQR AKL+A +AD E+T +I P+ + DW+ + R + + K P + R+++ KV LK AM+KY ++ GNT G++KL C+AC+RPF ++ TPGD R+ + D LPA R ++ + S S S+H P + + GG +S+KFV+RGGFKIPR T
Sbjct: 279 KLDKNVHLLLTKSNKLELINERLRAEEAELVKIGLFSETRSLDSEYQQFKLGQELETKLATATQRTAKLIAAKADIEITRQVI------PHADPATEDWEEMISDTRSRLVDTIYTTVFAKQTEASKFP-RDTVAMEIRQKYMDKVLMALKIAMTKYSNVQPGNTFLGRMKLQMSCMACNRPFKESN--TPGDQRSISRDRLPA--------HGRGDDDLSSVRSSASAGLGSVHPPGSAMSFGSR-------GGSSQSSKFVFRGGFKIPRPKT 529
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: A0A6H5L1L3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1L3_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 3.750e-15 Identity = 65/211 (30.81%), Postives = 103/211 (48.82%), Query Frame = 1
Query: 1 KMQNKIQVLSSKDMFWEALGLKLKAH--------AESFGEASCR---------AEVASEE-------QDRYVLPIEL----QQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDTRMALEKKCPAHGSFCTRNRERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKLDPVCIACDRPF-GPA 546
++Q + L++K+ W+ L ++ K H A+ G A+C ++S E +P+ L Q++++ +Q VAK++A +AD+EVT + + + DWDR+V+ +R F+ F+ D K P RE F K+E +K A+SKY+ I G T+ GKV L P C+ACDRPF GPA
Sbjct: 213 RLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEPFRPHHHLTPLSSNEFLATRRKASAVCVPLSLSPAMQKHLSAVSQMVAKIVATRADYEVTRQAVNRKNPGED-----SDWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRPVEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHLLPSCMACDRPFIGPA 418
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: A0A8J2S9U3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9U3_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 4.380e-12 Identity = 56/186 (30.11%), Postives = 84/186 (45.16%), Query Frame = 1
Query: 34 KDMFWEALGLKLKAHAESFGEASCRAEVASEEQDRYVLPIELQQYVAGNTQRVAKLLAQQADFEVTFVLIQKLTVAPNVERGGMDWDRRVQTMRGNFLRCFLDDTRMALEKKCPAHGSFCTRNRERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKLDPVCIACDRPFGPASQATPGDSRAATLDL 591
KDM + L L H + AE A + LP+ Q+++A Q ++ LA +AD E LI + + WD++++ R LR F + A K P + R RF +++ L+ +SK+ + TLFGK KL P C+ACDRPF TP D+ AA +
Sbjct: 559 KDMAGDRLDAILDEHVSELAKHCVEAESAVISEREMSLPVNEQKWLAATIQHCSEALATRADLECLRGLIGHVEPPETSDL----WDQQLEKNRARLLRSFCERLDEAAAKLHPTNDHMAEATRRRFNERLKLCLRVGLSKHDPVRPNMTLFGKTKLGPACVACDRPFD-----TPTDADAAITQM 735
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Match: A0A7S3JPN6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPN6_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 7.990e-7 Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 1
Query: 334 FLDDTRMALEKKCPAHGSFCTRNRERFFLKVEQGLKEAMSKYRSIDVGNTLFGKVKLDPVCIACDRPFGP 543
F+ R A K P + R+ F +++ GLK +SK++ I TLFGK++L P C+ACDRPF P
Sbjct: 7 FIVGVRQAANKLHPTTDTKVQSTRDLFLSRLDLGLKVGISKHQKIQPNYTLFGKLRLKPTCVACDRPFAP 76 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig267.7295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig267.7295.1 >prot_H-paniculata_contig267.7295.1 ID=prot_H-paniculata_contig267.7295.1|Name=mRNA_H-paniculata_contig267.7295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=375bp MQNKIQVLSSKDMFWEALGLKLKAHAESFGEASCRAEVASEEQDRYVLPIback to top mRNA from alignment at H-paniculata_contig267:213..7229+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig267.7295.1 ID=mRNA_H-paniculata_contig267.7295.1|Name=mRNA_H-paniculata_contig267.7295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7017bp|location=Sequence derived from alignment at H-paniculata_contig267:213..7229+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig267:213..7229+ >mRNA_H-paniculata_contig267.7295.1 ID=mRNA_H-paniculata_contig267.7295.1|Name=mRNA_H-paniculata_contig267.7295.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2250bp|location=Sequence derived from alignment at H-paniculata_contig267:213..7229+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |