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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal anchor |
| Exons | 3 |
| Model size | 727 |
| Cds size | 666 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2669.7294.1 >prot_H-paniculata_contig2669.7294.1 ID=prot_H-paniculata_contig2669.7294.1|Name=mRNA_H-paniculata_contig2669.7294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp
MGRYAASRRLRPIGYACCVVVAFSCLQILSVFAFRSLPSSPTSLLCPSRS
TSNSTPYSRRIYHDGCSWHAGSVPDTNRATANLRRLLMQQRALGPAAAAT
AAVVAPLPCSEHVHVLNGVGVTHGEKQRHVLCGLTMRKPTMRYSTALGAV
GSGNSGMEQGERKGGGREGESWRQRVVRRFVTALTRIRAALAAILGRFRI
GERRKPSNTSLFRAAGRNRGRA back to topmRNA from alignment at H-paniculata_contig2669:9814..16188+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig2669.7294.1 ID=mRNA_H-paniculata_contig2669.7294.1|Name=mRNA_H-paniculata_contig2669.7294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6375bp|location=Sequence derived from alignment at H-paniculata_contig2669:9814..16188+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTGAATCGGATCGACGTCGGCGCTGCTCCTTTTTCATCACCTCAGCTGC
TGTGCTGCCATGGGCCGGTATGCCGCATCTCGGCGGCTGAGACCGATAGG
TTATGCTTGCTGCGTTGTGGTTGCATTTTCGTGTCTGCAAATATTGTCGG
TGTTCGCGTTTCGATCACTACCATCCTCCCCGACATCCCTGCTGTGCCCG
AGCCGCAGCACATCCAACAGCACACCCTATAGCAGACGCATATATCATGA
CGGCTGCAGCTGGCATGCCGGCAGCGTGCCCGACACGAATAGAGCTACAG
CGAATCTTCGTCGATTGTTGATGCAGCAACGAGCACTAGGGCCGGCGGCG
GCGGCGACGGCGGCTGTTGTGGCTCCCCTACCATGTTCCGAACACGTGCA
TGTATTGAACGGTGTGGGTGTGACACATGGCGAGAAGCAGCGCCACGTGC
TATGTGGGCTGACCATGAGGAAACCTACGATGAGGTGTGTTGTTCAAACG
ATACAATACTCTATACTGTGTCGAACCCAGTATGTATACCATAATGCTAG
AATCAAAGTCTGTCGTAGTGTAAAAGACCCTGTTCGTGTAGCGAGTGGGC
ATGATGATGCAGTACTTTCGAAGTTGAACAATAGCAGTCTTCATATTCAA
GTTTTTTTATAGTCATGCAAACCCATGCCTTTAAACAGGGCTAGTGTAGT
ATTACTACAAGCTGGGTCGGCCAAGAGCCCGATGAATCGCCAATATCGGG
ATGCGCTGCTCAACTTTTTCGAATTTTGGCGTTAGATTTTAACGCGTGAT
TCGTAACGCACTCGCCGAAACATTCAAAGAAGGTCCTCTTCGATTTTTGT
TTTTTTGGTCGCCGAGGTACGACCGACCCAAATAACCACATGACTCGAAA
GTCGACGGTATATCGGCGAAAAACACAACGGGGACCTTTTAATGTGTCCG
CGAGTGCGTTACAAATCATGTGTCAAAATTCACACCCAAATTCGAAAAAT
TAAGCGGCGCATTCCGGAATTTCGAAAGTGACCTTGGCGCGAGAAAAATG
TTCGGATACTCGCATCGCAATTTAGATCGGCGGGAAAGCTATGCTGTGTT
CGTTGCAGATAAGCACTTATATGATTAACATGCGCAGCATGCATCTTACA
GTAGCCCTTCTCGTGACCACGATGCCGTTGGTTGTACACACATAAATCGC
GTTGTTTAGCAGGGTTACAAGTAGGTTAAAAAAGTATATCTGAATAATGC
ACCGGTCGAAAAAATGTATATTCGATGTACGCACTGCGTTGAATCATTCT
TGCACCTGAAGCATCAACAGCACGATACTTTCGATACCAACACAGAGCGT
GCAACACTACCTTGAACGATTCATTGTATAAGTGCTGGGATACAAACCAC
ACAATACAAAACAGGCGCCACTAGCAGGTTACGATTTTTACTCAACGCTA
ACACACGACGTAAACCACGATCTAACACACAGCTCACAGTTTCACTTGGA
TACAAACTGGACTCAACATTGCATGGTACGTTGTGCTTTGTACAAATGTA
CAATGGTACGAACAGATCAGCTGTAGAAGGCAATCGCTGCACGTGAGTAT
TCGTTTTCTTGGCGGTGTATTCAACTTCAGTCGATACGTTCGCTTGGTCG
AGTCGTAGTAAAATGTAGAGAGCGAGGTGCTCTCCCACCGCTGGCCGTCT
GGCATGCTCATAGCCATGACGCAGCGGCCTGGGCGTCTCCAGAGCAAGAC
GCTCCTGAATCCGCGAGTTTCTGATTGCACCGCTAACCCTCTCCCCCAAA
AAAACAAAAAAATTACGAAGTCGAAACTCATTTCCTTGCGCGCTCCTCGG
CCAGCTAACCTCAATTTGCAAAATAATCTAACGTCAGCCGGTTAAATGGC
TCCGTCTATGCCCCTGGATTGGCCGATTGCAACAATGCCTTCATTTTTGG
AGATGAATCGCAATAGACGAGAATTTATGATCAGCTGAAACAATATGGGT
TTCTTAGTCGGCCCGGCTTGTACTTTATATATATATATACGTGGTTGACG
GTACTGGTACAAAAAATTGCACCGTGATTGTCTCACGTCCACCTAGTCGT
GTTGTTCTGATCCTGCCCATTCTAGTTCGGTTCACTGCTCCATCACGCGG
ATTCAGGCCTTCAAGAGAGAAGTACGGTGTACCGAGAAACGCAGAAAAGG
TGTTACCAAAAGCACTTGAAATTGGAGTGTTTCGAAAAAGGAGCTTGCGC
CTAAAAACCATAACAGGCGCATGCATTCCCACAGGTTATGGTGGCGGAGG
GCTACAGGGCTTTGGGGAGTTTCGAACGGCGGTTTGTCCATTTTCCTTGA
TTTGACCCTATAGTATCGCGTGCAGCGCCTGAGAACTGTTGTTGCACATG
CAGACAGTAAACACAGCAACAGCCAGTCTCTGACACGGGCTTGTGCGCTG
GTTGGTATAACGGTCGCGCTAAACGAAGCCAATATCCCCCCGCCCGTTTT
CCGTTTTTCCGAAAACTCTGAAATTATTACGTATCGTAAAAAGCTCAAAA
TTGGTAGTGATGACTATTGATTCCAATGCACGACAAAATATTGAATTACG
TTGTACTGGAAATCGTCACAACAAGAGTTACATTTGTTTTAAGGGAGATG
AAATCACAACGTGTATCTTTCTGCCTCCGGCGAGGCCACCTCACCAGCCG
GGGCGGTCCGTTTGTTTGGCCCGTGCAAAAAGAATTCGCGCTGATGCGTT
CCAATATATCATAGGGATTATAAATGCTACCCGTACACAACACCAAGTAT
TGGACGACACAAATTAAATGGTAGGTAAGGAATGTATGAGGGCAACAATA
TCATGTGCATCATCGCCGCACTTTTTCTTTTCTTTTTTTCTCCAATTTCA
CGCGTTGCTATTGCGATTTTTTTTTCTTTTCTTTTGGAGGACGGCAAGAA
GACGAAATAAACGAAAGAAAAAAAAGAAAACGGCCTCGTTTAGCGCGCGG
CCCTAAATGTTAGTGATCAACGGGCGTAAAGACTGTACACCGGAGAGCTT
ATCGGTTTAGTGTACTCCTAGGTGGTTACCGTACCGGGTCCGCTGAGATG
TCTGCGAACGTAAATATGAGGAAGCTGAGGCTGCATTTTTTGCTATTTCT
GCCGAAGCATGGACGCAAGTTTGTCTTCACTATTTTCAAGTGCGTTTGGG
CCCGTTCCGAGACTGTTAAGCCGTTTTTCTTCAACAAATTTACTTGGAAA
AACTCCGTTTTTACTTTTCATGGGCGGTCCGAGCCGAGTCGGCATTAGTC
TAGTTTTTTATTTTAGTTGGAGTTTTTGGCACACGTTATCACAATACCCA
GCGTATGTTTATCGACGCTCCCAAAGTAAAAACGACCCACCCTATTTCGT
TCTCTAAGTCAACGAAAAACATCACTGCATTGTAACTTGGTTGTAATGAT
GACGATGTCAACGATAATGACGATAGCAACGATAATGACGACGATGATGA
TGATGATGATGATGATATTGGTTACGAATAGTGAGTTAAGTACGCTACTA
CCGTGCCTGCTGTCTGGAGTCGCAGGCTCGTCGTCCTGCTATTGATGTAG
CTAAATAAATACAGATATACTTTCTCTGTGCCATAAGTGAAGTCGTTTGA
GTTTACAGAGGTACGTAACCACTTCCCTTTTCCTTTTTTTTTATTAAGTT
ATAATCCTACATGTTTTGGGGGGTTGATCCCCAGAATATCACCGAAACTG
AAGAAATCCACTGGGAGCGCGTGTGGCGCAAAAAAACATAACGGTCGAGA
GATGGTCATATTTTTCCCCTTCTCGTATTTTCCGAATTATTAAACAACGT
TAAAATTGAAAACACACACACACACACACACACACACACACACACACGCG
TTAAAATTAGAAAAATTATATCAACGTTGAGCGACCGTTAATCCTGATAG
ACAGATTGGAAAGTACTTCGCAGTAGCGCATGCATTATGAGCCTGTCATA
TTTCAGCTTTTCAACGATTTAAACTGTAGCCTGTGAACAATCTTAGGTCT
AGATATACAATTAGCCAAACACAACCGACTTTTACCTGTGACACAGAAGA
GCTATATATATATATATATATTTATTTCCTCACGATACTACCGGGGGTTT
CCCGTGATGTGTGCGACACACCGATACCGTAGGTATTCGACGGCCTTGGG
TGCTGTTGGGTCTGGGAACAGCGGTATGGAGCAAGGGGAGCGGAAAGGGG
GTGGCAGGGAGGGGGAATCGTGGCGGCAGCGCGTGGTTAGGAGGTTTGTG
ACCGCGCTGACAAGGATACGAGCGGCGTTGGCCGCAATCCTGGGCAGATT
TAGAATTGGAGAGGTGAGAGAGAGTGTCGAGTGTTTGCCGGAAAATTTGT
TGTATTTATTGTTACTGCACTGGACTGGATTGAACTGTACGGTGTACTTT
ACTCTATGAAATGTGTCAGCGCTGGTACCGATAAGGTCAGCGTTGGCTGT
AGTTGGAGCCAGACCGGCTTGGAGTGATGCGTGTTTTATCCGCAAATGTA
ATGTACTGCTGTACTGAGGTACATGAATGAAGCAGCGGCGGCGGCGGTTG
TTATTCAAGGACAGGGAGACGATACAGTGACAAATATTCTTGGTAGTCTA
GGGCGACTATCGGAAGCTATGACCGTCACTACTGAAAAGATGGGCCCGTC
GGTATCCATGTTTCCTTGGGAACCTACAATACGCTCGCCTCATCCTCCAA
AAGGGGATATCATCCAACCTGTACTTGTCTGGCAGAAACAAAACACTAGT
TATTGTTTTCCAACTTGGTCAAAAATTTCTCCTCAACCATGTGCCCCTCT
CTATACGATGGGTTCATATCAATGATAAAAAAATTGGCGCAACATGACTC
GGCGGTTCACCGCTGGGATTTGGGGGAGGCGGCGGCGGCCTCGAGCCCGC
CGGAGGGGCCGCCGGAGCCTACGCCCCCCCCCCCGAGGGCCCTCTCGGCG
TAGGGGCCCCTAGAGGGAATTTTAAAATACAGTCACGAGTCAATTGGGCC
AAGTTTTGCTCCTAATTCGACGCTTGTCAGCTTATATTCAAAATAATCTA
TTATAGAACCTAGATAGAGCTCCATGCAGTGCGAACTTCATGTACTGTAT
GTAGTTAGTTCCCATCAGCAAAAGAAAACGCACTCAAAAACTTGCCCAAT
AGTATTTTTTTCGCTTTTCAGCGAAGAAATGCCCCCGCCAGTTATTCCCG
CGTACGGTCGCCTACAACAGCGAAATAATCAGGTGGCCACCAAGAATGCT
GTTGGTTCTGGGTCACAGTCACCGCGGATACCTCCATTACTAAGATGTTA
AACCCTGACTCAAACTCACCCCATGGGGCACGTATGTTGTAGGTTCAGTT
GTCGAGACTCGCACTTTTTTTTTTTTTTTCACAAGTTTTTTCTCAAGTTT
CGTGAAAAAGTCAGGTATTAGTATCACGCGTTAAAACAAATTGCCTGCGG
AAAGGACGGCGACAGCGCTCGTCAGAAGTGTGCCGACGTGATTTTAAAAC
GGTTTACGAGCGTTTTATTGAAAGGGACGTCTGGCTGCTGCCGCGACGAA
CGTGTGATGAGTAGTACCGAGACATTGCACTCACTATCCAGTCAGCCTTC
GGACCGCGGGTTCCGATCATTTTGACGGGACTGATTGTCCATCATCAAAG
AATAATAAGAAATATTTAACCCGTTCTTCTCCTCTTCCTCCTCTTCTCCA
TCATGTTCTAATGCCTCCACCCTGTTCCCACCGGATGCACATGGTTGGAT
AATGTCGCTTGTATGAGAACGAGAGGCAAAGGAAAGGGTGCGAAAGAGAG
ACATTTCAATCATTCCGGGGATTTAAAAAAGCGAGGGCTGAGGTAGACAG
GATAGATCAAAAACGTTTTTTTGATCCAGATTTAGAAAGAAAGGTTGGCT
TCGATAGGAACAAAGGAAAGCGTCGTCCTCTCAACAACGCGTGGTCCATG
GTGTTGAAATGAAGAACTATATGCATGCAAAAACAGGAGTATGACCTTCG
CCCCCGTCCTCCCGAGGAACCGTGGCCAATTGTCTAACAAGTACGATATT
CAAGACATGAGTACCCCCCCCGCGCCCCCGCCTCCCTTCAGGAAAGAGCG
ATTGACTGTCGAAATTGCTCTGATAGAAACAAAGCTCCGCCCTTCGGAGG
ACGCGTGGTCGATGGTCTAACACTGCGACATGCAAAACACTAGTACGCCC
CCCCCTCCCCCCCCCTCGCCCCTACCCGTTTGGACGGACTCGCTGACACA
AACGTACGATATCAGAGAAGAAAGCCTTCCAATACCTCGCTCTTCCGAGC
TGCCGGAAGAAATCGCGGGCGAGCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig2669:9814..16188+ >mRNA_H-paniculata_contig2669.7294.1 ID=mRNA_H-paniculata_contig2669.7294.1|Name=mRNA_H-paniculata_contig2669.7294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig2669:9814..16188+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCCGGTATGCCGCATCTCGGCGGCTGAGACCGATAGGTTATGCTTG
CTGCGTTGTGGTTGCATTTTCGTGTCTGCAAATATTGTCGGTGTTCGCGT
TTCGATCACTACCATCCTCCCCGACATCCCTGCTGTGCCCGAGCCGCAGC
ACATCCAACAGCACACCCTATAGCAGACGCATATATCATGACGGCTGCAG
CTGGCATGCCGGCAGCGTGCCCGACACGAATAGAGCTACAGCGAATCTTC
GTCGATTGTTGATGCAGCAACGAGCACTAGGGCCGGCGGCGGCGGCGACG
GCGGCTGTTGTGGCTCCCCTACCATGTTCCGAACACGTGCATGTATTGAA
CGGTGTGGGTGTGACACATGGCGAGAAGCAGCGCCACGTGCTATGTGGGC
TGACCATGAGGAAACCTACGATGAGATGGGCCGGTATGCCGCATCTCGGC
GGCTGAGACCGATAGGTTATGCTTGCTGCGTTGTGGTTGCATTTTCGTGT
CTGCAAATATTGTCGGTGTTCGCGTTTCGATCACTACCATCCTCCCCGAC
ATCCCTGCTGTGCCCGAGCCGCAGCACATCCAACAGCACACCCTATAGCA
GACGCATATATCATGACGGCTGCAGCTGGCATGCCGGCAGCGTGCCCGAC
ACGAATAGAGCTACAGCGAATCTTCGTCGATTGTTGATGCAGCAACGAGC
ACTAGGGCCGGCGGCGGCGGCGACGGCGGCTGTTGTGGCTCCCCTACCAT
GTTCCGAACACGTGCATGTATTGAACGGTGTGGGTGTGACACATGGCGAG
AAGCAGCGCCACGTGCTATGTGGGCTGACCATGAGGAAACCTACGATGAG
GTATTCGACGGCCTTGGGTGCTGTTGGGTCTGGGAACAGCGGTATGGAGC
AAGGGGAGCGGAAAGGGGGTGGCAGGGAGGGGGAATCGTGGCGGCAGCGC
GTGGTTAGGAGGTTTGTGACCGCGCTGACAAGGATACGAGCGGCGTTGGC
CGCAATCCTGGGCAGATTTAGAATTGGAGAGGTATTCGACGGCCTTGGGT
GCTGTTGGGTCTGGGAACAGCGGTATGGAGCAAGGGGAGCGGAAAGGGGG
TGGCAGGGAGGGGGAATCGTGGCGGCAGCGCGTGGTTAGGAGGTTTGTGA
CCGCGCTGACAAGGATACGAGCGGCGTTGGCCGCAATCCTGGGCAGATTT
AGAATTGGAGAGAGAAGAAAGCCTTCCAATACCTCGCTCTTCCGAGCTGC
CGGAAGAAATCGCGGGCGAGCGAGAAGAAAGCCTTCCAATACCTCGCTCT
TCCGAGCTGCCGGAAGAAATCGCGGGCGAGCG back to top
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