mRNA_H-paniculata_contig26661.7286.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: D7FY90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY90_ECTSI) HSP 1 Score: 235 bits (599), Expect = 1.460e-67 Identity = 119/175 (68.00%), Postives = 134/175 (76.57%), Query Frame = 2
Query: 2 MEHLSDLWKAIGFSMGDRTIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTANPCLSTFTKYPDYLIHRSQ 526
MEHL+DL +AIGF DR +FRE+RRIHVINPKL A RATEDTHAQGQDESRRRGTIQPH+T+V+AQ+RRS LQLLSQG+PSI+LGMC DYWDGSAISNLP L K+IL MHQQWSL DLDVVAFAY PVP+T NP +S+F K+PDYLIH SQ
Sbjct: 743 MEHLADLSEAIGFCAADRGMFRERRRIHVINPKLAASRATEDTHAQGQDESRRRGTIQPHLTSVMAQERRSGALQLLSQGNPSIVLGMCRDYWDGSAISNLPATLRKTILGMHQQWSL---------------------EDLDVVAFAYVPVPYTVNPFISSFNKHPDYLIHLSQ 896
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: A0A835Z0N0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0N0_9STRA) HSP 1 Score: 115 bits (289), Expect = 2.500e-29 Identity = 64/126 (50.79%), Postives = 80/126 (63.49%), Query Frame = 2
Query: 2 MEHLSDLWKAIGFSMGDRTIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNC 379
MEHL DL + IGF D+ K I ++ P AD A G +E+RRRGTIQPHV VV +DRR+ LQLLS G+PS++L MC DYWDGS IS +P L +IL+M+QQWSLV +C
Sbjct: 13 MEHLLDLSREIGFGEADQVSHNVKLNIPLL-PFDEADVALCLVSRAGHEETRRRGTIQPHVKGVVVEDRRTRALQLLSVGNPSLLLTMCADYWDGSTISAIPAALKSAILDMYQQWSLVRDCSFHC 137
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: A0A6H5L4W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4W4_9PHAE) HSP 1 Score: 117 bits (292), Expect = 3.670e-28 Identity = 59/105 (56.19%), Postives = 68/105 (64.76%), Query Frame = 2
Query: 239 GHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTANPCLSTFTKYPDYLIHRSQFSTKSRSRG 553
G+PSI+LGMC DYWDGSAISNLP L K+IL+MHQQWSL DLDVVAFAY PVP+T NP +S+F K+PDYLIH SQ S +G
Sbjct: 11 GNPSIVLGMCRDYWDGSAISNLPATLRKTILDMHQQWSL---------------------EDLDVVAFAYVPVPYTVNPFISSFNKHPDYLIHLSQGQASSSGKG 94
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: G4YTS5_PHYSP (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=G4YTS5_PHYSP) HSP 1 Score: 119 bits (298), Expect = 3.200e-27 Identity = 63/165 (38.18%), Postives = 95/165 (57.58%), Query Frame = 2
Query: 5 EHLSDLWKAIGFSMGDR-TIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTANPCLSTFTK 496
+HL +L + +GFS+ D T+F+ ++ IH+I P+L T D H QGQD++R RG ++ H+ + V D+RS QLLS+GHP+++L C +YWDG +I L ++IL+M+ QW + DLD +AF+Y PVPH N S FT+
Sbjct: 656 KHLLNLSREMGFSVADDLTMFQRRQSIHIICPRLAHHEHTNDHHDQGQDDTRYRGNLKSHLYSTVVLDKRSHRHQLLSRGHPTVVLAHCSEYWDGKSICPLTSEKQRAILDMYNQWRV---------------------EDLDCIAFSYVPVPHKLN---SLFTR 796
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: D0NI74_PHYIT (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0NI74_PHYIT) HSP 1 Score: 116 bits (291), Expect = 2.740e-26 Identity = 60/161 (37.27%), Postives = 91/161 (56.52%), Query Frame = 2
Query: 5 EHLSDLWKAIGFSMGDR-TIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTANPCLS 484
+HL +L + +GFS+ D T F+ ++ IH+I P+L T D H QGQ+++R RG ++ H+ + V D+RS QLLS+GHP+++L C +YWDG +I L ++IL+M+ QW + DLD +AF+Y PVPH N S
Sbjct: 627 KHLLNLSREMGFSVADDLTAFQRRQSIHIICPRLAHHEHTNDHHDQGQEDTRYRGNLKSHLYSTVVLDKRSHHHQLLSRGHPTVVLAHCSEYWDGKSICPLTSEKQRTILDMYNQWRV---------------------EDLDCIAFSYVPVPHKLNSLFS 766
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: M4C0G0_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0G0_HYAAE) HSP 1 Score: 116 bits (290), Expect = 3.700e-26 Identity = 60/157 (38.22%), Postives = 90/157 (57.32%), Query Frame = 2
Query: 5 EHLSDLWKAIGFSMG-DRTIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTAN 472
+HL +L + +GF + D T+F+ ++ IH+I P+L T D H QGQ+++R RG ++ H+ + V DRRS QLLS+GHP+++L C +YWDG +I L ++IL+M+ QW + DLD VAF+Y PVPH N
Sbjct: 602 KHLLNLSREMGFCVAEDLTMFQRRQSIHIICPRLAHHEHTNDHHDQGQEDTRYRGNLKSHLYSTVILDRRSQRHQLLSRGHPTVVLAHCNEYWDGKSICPLTSEKQRAILDMYNQWRV---------------------EDLDCVAFSYVPVPHKLN 737
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: A0A225VSM2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VSM2_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.920e-26 Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 2
Query: 5 EHLSDLWKAIGFSMGDRTI-FREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTANPCLS 484
+HL +L + +GFS+ D I F+ ++ IH+I P+L T D H QGQ+++R RG ++ H+ + V D+RS QLLS+GHP+++L C +YWDG +I L + IL+M+ QW + DLD +AF+Y PVPH N S
Sbjct: 643 KHLLNLSREMGFSVADDMIMFQRRQSIHIICPRLAHHEHTNDHHDQGQEDTRYRGNLKSHLYSTVVLDKRSHRHQLLSRGHPTVVLAHCSEYWDGKSICPLTNEKQRIILDMYNQWRV---------------------EDLDCIAFSYVPVPHKLNSLFS 782
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: A0A662XKJ7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XKJ7_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.330e-25 Identity = 60/165 (36.36%), Postives = 95/165 (57.58%), Query Frame = 2
Query: 5 EHLSDLWKAIGFSMGDR-TIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTANPCLSTFTK 496
++L +L + +GFS+ D ++F+ ++ IH+I P+L T D H QGQ+++R RG ++ H+ + V D+RS QLLS+GHP+++L C +YWDG +I L ++IL+M+ QW + DLD +AF+Y PVPH N S FT+
Sbjct: 657 KYLLNLSREMGFSVADDLSVFQRRQSIHIICPRLAHHEHTNDHHDQGQEDTRYRGNLKSHLYSTVVLDKRSHRHQLLSRGHPTVVLAHCSEYWDGKSICPLTSEKQRAILDMYNQWRV---------------------EDLDCIAFSYVPVPHKLN---SLFTR 797
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: A0A484E8D3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8D3_BRELC) HSP 1 Score: 113 bits (282), Expect = 4.380e-25 Identity = 58/154 (37.66%), Postives = 90/154 (58.44%), Query Frame = 2
Query: 5 EHLSDLWKAIGFSMG-DRTIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPH 463
+HL +L + +GFS+ D + F+ ++ IH+I P+L T D H QGQ+++R RG ++ H+ + V D+RS QLLS+GHP+++L C +YWDG +I L ++IL+M+ QW + DLDV+AF+Y PVPH
Sbjct: 652 KHLLNLSREMGFSVAHDLSQFQRRQSIHIICPRLAHYEHTSDHHDQGQEDTRYRGILKSHLYSTVVLDKRSHRHQLLSRGHPTVVLAHCSEYWDGKSICPLTSEKQRAILDMYNQWRV---------------------EDLDVIAFSYVPVPH 784
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Match: A0A1W0A529_9STRA (Phosphatidylinositol-3-phosphatase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A529_9STRA) HSP 1 Score: 112 bits (281), Expect = 6.140e-25 Identity = 59/155 (38.06%), Postives = 84/155 (54.19%), Query Frame = 2
Query: 8 HLSDLWKAIGFSMGDRTIFREKRRIHVINPKLTADRATEDTHAQGQDESRRRGTIQPHVTAVVAQDRRSDTLQLLSQGHPSIILGMCPDYWDGSAISNLPGHLSKSILNMHQQWSLVCKLVVNCSMVPLASCALLNKHDLDVVAFAYTPVPHTAN 472
HL +L IGF D F+ K+ IH+I P+L + T D HAQGQ+++R RG ++ H+ + + D+RS QLLS+GHPS+++ C +YWDG +I L + IL+M+QQW + DLD VA Y PV H N
Sbjct: 1825 HLLNLSTEIGFQPADLANFQRKQSIHIIAPRLAIEEHTTDHHAQGQEDTRYRGYLKTHLYSNIVMDKRSHGHQLLSRGHPSLVVSQCGEYWDGKSICPLTADKRRLILDMYQQWKV---------------------EDLDCVALTYAPVAHKFN 1958 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26661.7286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26661.7286.1 >prot_H-paniculata_contig26661.7286.1 ID=prot_H-paniculata_contig26661.7286.1|Name=mRNA_H-paniculata_contig26661.7286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=226bp MEHLSDLWKAIGFSMGDRTIFREKRRIHVINPKLTADRATEDTHAQGQDEback to top mRNA from alignment at H-paniculata_contig26661:419..3301+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26661.7286.1 ID=mRNA_H-paniculata_contig26661.7286.1|Name=mRNA_H-paniculata_contig26661.7286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2883bp|location=Sequence derived from alignment at H-paniculata_contig26661:419..3301+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26661:419..3301+ >mRNA_H-paniculata_contig26661.7286.1 ID=mRNA_H-paniculata_contig26661.7286.1|Name=mRNA_H-paniculata_contig26661.7286.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1356bp|location=Sequence derived from alignment at H-paniculata_contig26661:419..3301+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |