mRNA_H-paniculata_contig26637.7278.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 2.340e-126 Identity = 212/328 (64.63%), Postives = 254/328 (77.44%), Query Frame = 1
Query: 1 KLVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESPPQLESVEDVTRHLTAVGANR-SPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAFRTVELPRVEALQGPPQDPNSWRILHDALA----ARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWNEARGAARTFAKQLVDQSMLQAVGDAYRVHDLVLRFLKPKLK 969
+L P +LP +A VP G ++L +++R LL AI ++ N A+ APCVL GM G GK+VLASAVVRD K+RE+F AG+FW++ ++AK+ LHA L G L +A+ + P L SVE+VTR+L AV A+ SPRLVVLDDVWE E+V AL+ TG+QLLVTTRDR+VVS+PG VEVGDMEE+EALEVLR+GCGA + +ELPR EALQGPPQDP SWR LH+AL+ RLG R M V RV AVLE S GAMADDP +Q+RCLFLAVLAPGTLAP DMLEDLW+EA GA +TFA QLVDQSMLQ GDA+RVHDLVL FLKPKLK
Sbjct: 205 QLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRA-RDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQGPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLK 531
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: A0A6H5KMV3_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE) HSP 1 Score: 306 bits (785), Expect = 1.630e-96 Identity = 176/327 (53.82%), Postives = 219/327 (66.97%), Query Frame = 1
Query: 1 KLVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESPPQLESVEDVTRHLTAVGANR-SPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAFRTVELPRVEALQGPPQDPNSWRILHDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWNEARGAARTFAKQLVDQSMLQAVGDAYRVHDLVLRFLKPKLKGRS 978
+L P +LP +A VP G ++L +++R LL AI ++ N A+ APCVL GM G GK+VLASAVV+ K+RE+F AG++W++ ++AK+ LHA L GL L +A+ + P L SVE+VTR+L AV A+ SPRL+VLDDVWE EVV L+ TG+QLLVTTRDR+VVS+PG VEVGDME+ EALE+LR+GCGA + +ELPR E LQ + G R MTV RV AVLE S GAMA+DP +Q RCLFLA A GAA+TFA+QLVDQSMLQ GDA RVHDLVL FLKPKLK S
Sbjct: 186 QLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRA-RDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDMED-EALELLRVGCGASKNLELPRAEVLQ---------------VVVDCGNDRIMTVPKRVDAVLEVSLGAMAEDPAKQRRCLFLA-------------------APGAAKTFARQLVDQSMLQPAGDALRVHDLVLLFLKPKLKADS 476
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: A0A6H5KF10_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE) HSP 1 Score: 237 bits (605), Expect = 1.500e-68 Identity = 124/207 (59.90%), Postives = 159/207 (76.81%), Query Frame = 1
Query: 4 LVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESPPQLESVEDVTRHLTAVGAN-RSPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAFRTVELPRVEALQ 621
L P +LP++A VP GA++L ++V+R +L AI ++ N A APCVL GM GGGK+VLASAVVRD K+RE+F AGIFW +VG+ +K+ LH L GLVL +A+ +PP L SVE+VT +L A A+ S RLVVLDDVWE EVV AL+ T +QLLVTTRDR+VVS+PG +EVGDMEE+EALEVLR+GCGA + +ELPR++ALQ
Sbjct: 397 LRPPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGGGKSVLASAVVRDEKVREHFSAGIFWWRVGRISKDRLHEWLEGLVLRVASASGTTPPMLGSVEEVTFYLKAFCADAESQRLVVLDDVWEPEVVNALQVTELQLLVTTRDRSVVSMPGECIEVGDMEEDEALEVLRVGCGAPKNLELPRLQALQ 603
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 222 bits (566), Expect = 1.700e-63 Identity = 164/430 (38.14%), Postives = 227/430 (52.79%), Query Frame = 1
Query: 28 LADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESP---PQ-LESVEDVTRHL-TAVGANRSPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAFRTV-------------------ELPRVEALQGPPQDPN-------SWRIL---HDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKGRSQSARSNLARCGILRPAKGSA*IYREWGDS---------------WRFVLP---DRPLEVGG--EPLGKATSCSCLQE 1149
+A VP GA+TL +SYV R ++ ++ P +AP + GMGGGGKT+L SAVVR +RE+F G+FW++VG++AK L +LL+GL E++A ++P P LES+E V +HL T A SPRLVVLDDVWE EVV AL G+++LVTTRDR+VV V GG +E+GDM E EALE+L RTV LP V A+ G +W L + +A ++ + + + ++ VL TSF A+A R+QE L + VLA G LAP +ML +LW E R A+ LV + +LQAVG + YRVHDLVL F+K ++ + A + G + + +GD WR V D LEV LG+ SC ++
Sbjct: 1 MAAVPAGALTLPQSYVERAA-VQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELL---LKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQS--SSIKVVLGTSFDALA--ARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATA---LQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATED 419
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE) HSP 1 Score: 219 bits (557), Expect = 5.390e-62 Identity = 136/284 (47.89%), Postives = 175/284 (61.62%), Query Frame = 1
Query: 157 MGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARD----NESPPQLESVEDVTRHLTAV-GANRSPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAF--RTVELPRVEALQGP-------PQDPNSWRILHDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWNEARGAARTFAKQLVDQSMLQAVGDAYRVHDLVLRFLKPKL 966
MGGGG+TVL SAVVR+ + EYF GIF + VG+ AK L LL+GL E+ A + +P L+S+E V +HLT V SPRLVVLDDV E EVV AL G++L+VTTRDR+VV VPGG +EVGDM E EALE+L + GA R +LP A+ G P P++W LH+ L+A+ + + VLE SF A+ D + ER L VLA G LAP +ML LW++ G + F QLVD+S++QAV YR+HDLVL F+K KL
Sbjct: 1 MGGGGETVLVSAVVRELSVLEYFRGGIFLMSVGRGAKNRLLPLLQGLAREMGAAPAHAPHGNPGDLDSLEHVMQHLTTVVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAVSSRIADLPLAMAVIGAMDESRESPHRPDTWTKLHEKLSAKPEFVYEEGLDNGLGNVLELSFSALDADAK--ERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKL 282
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 221 bits (564), Expect = 2.010e-60 Identity = 155/360 (43.06%), Postives = 204/360 (56.67%), Query Frame = 1
Query: 4 LVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESP---PQ-LESVEDVTRHLTAVGAN-RSPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCG-------AFRTV---------ELPRVEAL-------QGPPQDPNSWRILHDALAARLG-MHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKGRSQSAR 990
++P SLP++A VP AV L S +R + NP +AP + GMGGGGK+VLASAVVR +RE+F GIFWL VG+ AK+ L LL+GL ++ A ++P P L+S+E V RHL AV + SPRLVVLDDVWE EVV AL G ++LVTTRDR+VV VP +E+GDM E EALE+L G + RTV LP V A+ +G +W L D L + M ++ + VLETSF A+ R+++ AVLAPG +A +ML +LW E G R A+ LV + +LQ VG YRVHDLVL F+K K+K + A+
Sbjct: 128 VLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTF--RKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAK 485
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 221 bits (562), Expect = 5.080e-60 Identity = 152/364 (41.76%), Postives = 204/364 (56.04%), Query Frame = 1
Query: 4 LVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESP---PQ-LESVEDVTRHLTAV-GANRSPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAF-------RTV---------ELPRVEALQGPPQDPN-------SWRILHDALAARLGMHRAM-TVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKGRSQSARSNLA 1002
L+P SLP++A VP GA+ L S ++ + P ++AP + GMGGGGK+VLASAVVR +RE+F GIFW++VG+ AK L ALL+GL ++ A ++P P+ L+S+E V +HL AV S RLVVLDDVWE EVV A G ++L+TTRDR+VV VP G +E+GD+ E EALE+LR GA RT LP V A+ G +W L L RA + ++ VLETSF ++A R+QE L +AVLA G LAP +ML +LW E R A+ LV + +L AVG YRVHDLVL F K ++ ++ + A
Sbjct: 234 LLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATA 595
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 220 bits (561), Expect = 6.420e-60 Identity = 164/432 (37.96%), Postives = 221/432 (51.16%), Query Frame = 1
Query: 4 LVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESP---PQ-LESVEDVTRHLTAVGAN-RSPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAF-------RTV---------ELPRVEALQGPPQDPN-------SWRILHDALAARLGMHRAM-TVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKGRSQSARSNLARCGILRPAKGSA*IYREWGDS---------------WRFVLP---DRPLEVGG--EPLGKATSCSCLQ 1146
L+P SLP++A VP GA+ L S ++ + P ++AP + GMGGGGK+VLASA VR +RE+F GIFW++VG+ AK L ALL+GL ++ A ++P P L+ +E V +HL AV + SPRLVVLDDVWE EVV A G ++L+TTRDR+VV +P G +E+GDM E EALE+LR G RT LP V A+ G +W L L RA + ++ VLETSF ++A R+QE L +AVLA G LAP +ML +LW E R A+ LV + +L AVG YRVHDLVL F K ++ ++ + A + G + +GD WR V D LEV LG+ SC +
Sbjct: 251 LLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLA--VRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATA---LQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATK 677
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 215 bits (548), Expect = 3.580e-58 Identity = 142/359 (39.55%), Postives = 199/359 (55.43%), Query Frame = 1
Query: 4 LVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESPP----QLESVEDVTRHLTAVGANR-SPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAFRTVE---------------LPRV-------EALQGPPQDPNSWRILHDALAARLGMHRAM-TVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWN-EARGAARTFAKQLVDQSMLQAVGDA-YRVHDLVLRFLKPKLKGRSQSAR 990
++P SLP++A+VPVGA+ L S ++ + NP + P + G+GGGGK+VLASAVVR +RE+F GI W++VG+ AK L LL+GL E+ A ++P L+S+E V +HL AV + R SPRLVVLDDVWE EVV A G +LL+TTRDR++V P G +E+GDM E EALE+LR G + LP V A++G +W L RA + ++ VLET+F ++A R+Q+ L +AVLA G LAP +ML +LW E A+ LV + +L AVG YR+HDLVL F K ++ ++ +
Sbjct: 36 ILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLAT--RKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVK 392
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 215 bits (547), Expect = 4.040e-58 Identity = 144/354 (40.68%), Postives = 205/354 (57.91%), Query Frame = 1
Query: 4 LVPRSLPNLADVPVGAVTLGKSYVTRLFLLRSAISHVMNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAKEDLHALLRGLVLELAARDNESP---PQL-ESVEDVTRHLTAV-GANRSPRLVVLDDVWEEEVVGALEHTGMQLLVTTRDRAVVSVPGGSVEVGDMEENEALEVLRIGCGAF----------------RTVELPRVEAL-------QGPPQDPNSWR-ILHDALAARLGMHRAMTVGTRVQAVLETSFGAMADDPRRQERCLFLAVLAPGTLAPPDMLEDLWN--EARGAARTFAKQLVDQSMLQAV-GDAYRVHDLVLRFLKPKLK 969
++P +LP A VP GA+ L +SYV R ++ A+ +M+P A AP ++ GMGGGGKTVLASA+VR + E+F GIFW+++G+ A + L L+GL E+ A ++P P + +S+E V +HL AV SPRLVVLDDVWE EVV A G+++LVTTRDR++V VPGG +E+GDM E+EALE+L G R LP V A+ +G +W ++ + M + VL SF A+A R++E L +AVLAPG +AP +ML +LW + G A+ LV++ +LQ V G YRVHDL+L++L+ K+K
Sbjct: 229 VLPPTLPQRAAVPTGALALPRSYVERPG-VQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALA--ARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEE-AEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIK 578 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26637.7278.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26637.7278.1 >prot_H-paniculata_contig26637.7278.1 ID=prot_H-paniculata_contig26637.7278.1|Name=mRNA_H-paniculata_contig26637.7278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=309bp MNPALAKAPCVLAGMGGGGKTVLASAVVRDRKIREYFCAGIFWLKVGQNAback to top mRNA from alignment at H-paniculata_contig26637:152..2328- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26637.7278.1 ID=mRNA_H-paniculata_contig26637.7278.1|Name=mRNA_H-paniculata_contig26637.7278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2177bp|location=Sequence derived from alignment at H-paniculata_contig26637:152..2328- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26637:152..2328- >mRNA_H-paniculata_contig26637.7278.1 ID=mRNA_H-paniculata_contig26637.7278.1|Name=mRNA_H-paniculata_contig26637.7278.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1854bp|location=Sequence derived from alignment at H-paniculata_contig26637:152..2328- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |