mRNA_H-paniculata_contig2659.7260.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: A0A7S0NCK9_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0NCK9_9CRYP) HSP 1 Score: 166 bits (421), Expect = 8.170e-51 Identity = 78/115 (67.83%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 1 FVRVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
F RV EI G L WE GRW+TILHAG RDT+ +T+FD+I+A++IPS+VVFED+RVLAF D+NP APTHVL++PK+R GLTQLRYAT DH GILGHML VAAKIA + L+G+R
Sbjct: 5 FGRVYGEIRGALQKWEQDGRWNTILHAGLRDTEAATIFDRIIAKQIPSSVVFEDERVLAFDDVNPQAPTHVLLVPKQREGLTQLRYATEDHEGILGHMLAVAAKIAKQKNLQGYR 119
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: A0A835YG69_9STRA (Glutathione s-transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG69_9STRA) HSP 1 Score: 171 bits (432), Expect = 9.830e-50 Identity = 84/113 (74.34%), Postives = 93/113 (82.30%), Query Frame = 1
Query: 7 RVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
RV EEI G L W+ +GRWDTILHAG RD P T+FD+IL +EIPSTVV ED VLAFRDINPVAP+HVLIIPK R GLTQLR+ATADHA +LG MLE AAKIA DE+LEGFR
Sbjct: 233 RVKEEIEGALRPWDERGRWDTILHAGARDAAPETIFDRILRKEIPSTVVHEDAYVLAFRDINPVAPSHVLIIPKVREGLTQLRFATADHAFVLGKMLEAAAKIAADEKLEGFR 345
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: D8LP27_ECTSI (Glutathione s-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP27_ECTSI) HSP 1 Score: 169 bits (429), Expect = 3.550e-49 Identity = 83/113 (73.45%), Postives = 93/113 (82.30%), Query Frame = 1
Query: 7 RVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
R+ +EI L W + GRWDTILHAGKRDT+P ++ DK LA+EIPST V DD V FRDI PVAPTHVLIIPK RNGLTQLR+ATADHAG+LGHMLEVAAKIA +EELEGFR
Sbjct: 241 RIADEIKAPLDKWGANGRWDTILHAGKRDTEPPSILDKFLAKEIPSTGVLGDDSVRPFRDIAPVAPTHVLIIPKVRNGLTQLRHATADHAGVLGHMLEVAAKIAKEEELEGFR 353
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: A0A6U4NQT2_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4NQT2_HEMAN) HSP 1 Score: 161 bits (407), Expect = 9.260e-46 Identity = 71/115 (61.74%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 FVRVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
F +V EEITG L W+ GRWDTI AGKRDT P+T+FDKI+A+EIPS +VFEDD L F+D+NP APTH+L+IPK+R GLTQLR+AT DH G+LGHM+ A + + +LEG+R
Sbjct: 257 FAKVYEEITGALKGWDENGRWDTIQGAGKRDTAPATIFDKIIAKEIPSDIVFEDDHCLVFKDVNPQAPTHLLVIPKKREGLTQLRHATEDHKGMLGHMMATVASVVREHKLEGYR 371
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: A0A6V3BGT8_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BGT8_HETAK) HSP 1 Score: 158 bits (400), Expect = 9.700e-45 Identity = 71/114 (62.28%), Postives = 92/114 (80.70%), Query Frame = 1
Query: 4 VRVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
+R+ E+ G L WE+ GRWDTIL AG RD P+T+FDKI+A+EIP+ V++EDD+ LAFRDINP APTH L+IPK+R GLTQLR AT DH G+LGH++ VA ++AT++ LEGFR
Sbjct: 256 MRIHAEVLGALDGWEAAGRWDTILGAGLRDDAPATIFDKIIAKEIPADVLYEDDKCLAFRDINPAAPTHFLVIPKQREGLTQLRNATEDHVGLLGHLMLVAGRVATEQNLEGFR 369
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: L1JNC2_GUITC (HIT domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JNC2_GUITC) HSP 1 Score: 152 bits (383), Expect = 1.310e-44 Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 1
Query: 1 FVRVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
F +V +EI+ LS W+ RW ILHAGKRD T+FDKI+A+ IPS VVFEDD+VL F+DINP APTH+L+IPKRR L+QLR+ATA+H GILGHML V AK+A++E L +R
Sbjct: 37 FAKVQQEISDALSKWDENNRWAGILHAGKRDEAEQTIFDKIVAKSIPSQVVFEDDKVLVFKDINPQAPTHLLVIPKRRETLSQLRFATAEHEGILGHMLAVVAKVASEEGLGDYR 151
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: R1E152_EMIHU (HIT domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1E152_EMIHU) HSP 1 Score: 142 bits (358), Expect = 8.330e-41 Identity = 70/113 (61.95%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 7 RVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
RV +EI L WE +GRWD +L+AG RD P+T+FDKIL++EIPS VVFED LAFRDINPVAP H+LIIPK R+GLT L ATA+H+ ILGH++ AA IA E L FR
Sbjct: 40 RVADEIRSGLQPWEERGRWDAMLYAGARDVAPATLFDKILSKEIPSEVVFEDALCLAFRDINPVAPAHILIIPKHRDGLTGLGAATAEHSAILGHLMVAAAAIAKQEGLSEFR 152
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: A0A0G4F2S0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F2S0_VITBC) HSP 1 Score: 143 bits (361), Expect = 2.230e-39 Identity = 67/113 (59.29%), Postives = 84/113 (74.34%), Query Frame = 1
Query: 7 RVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
RV +EITGVL W KGRW TIL AG +D P+T+FDKI+ +++ + +V EDDR +A RDINP PTHVL+ PKRR+ LTQLR AT +H GILGH+L AAK+A DE E +R
Sbjct: 210 RVFDEITGVLKGWSEKGRWTTILGAGLKDQAPATLFDKIMNKQVSADIVHEDDRCMAIRDINPQGPTHVLLFPKRRDNLTQLRQATEEHKGILGHLLVTAAKLARDEGFEAYR 322
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: A0A0G4I3R4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I3R4_9ALVE) HSP 1 Score: 144 bits (362), Expect = 5.400e-39 Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = 1
Query: 4 VRVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEELEGFR 345
+RV EEI+G L W+ KGRW +IL AGK DT P TVFDKI+++E+PS V++ED+ +AF+D NP AP H L++PK+R LTQLR A+ DH G+LGH+L VA+KIA + LEG+R
Sbjct: 272 MRVREEISGPLRAWDEKGRWKSILGAGKEDTDPPTVFDKIISKELPSEVLYEDNVCMAFKDANPQAPVHFLVVPKKRKTLTQLRNASGDHKGLLGHLLLVASKIAKEMNLEGYR 385
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Match: A0A7S3P858_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P858_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.810e-38 Identity = 66/111 (59.46%), Postives = 81/111 (72.97%), Query Frame = 1
Query: 1 FVRVMEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDDRVLAFRDINPVAPTHVLIIPKRRNGLTQLRYATADHAGILGHMLEVAAKIATDEEL 333
F +V EI G L W++ GRWDTIL AG RDT T+FDKI+A IP+T+V EDD+VLAFRDINP AP HVL+IPK RNGLT+L ++ +H ILG +L A +IA DE L
Sbjct: 70 FAQVYNEIQGALEKWDANGRWDTILGAGLRDTADPTLFDKIVAGSIPATIVKEDDKVLAFRDINPAAPVHVLVIPKDRNGLTRLTKSSPEHVDILGRLLVAAGEIARDESL 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2659.7260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2659.7260.1 >prot_H-paniculata_contig2659.7260.1 ID=prot_H-paniculata_contig2659.7260.1|Name=mRNA_H-paniculata_contig2659.7260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MEEITGVLSVWESKGRWDTILHAGKRDTKPSTVFDKILAEEIPSTVVFEDback to top mRNA from alignment at H-paniculata_contig2659:8996..10077- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2659.7260.1 ID=mRNA_H-paniculata_contig2659.7260.1|Name=mRNA_H-paniculata_contig2659.7260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1082bp|location=Sequence derived from alignment at H-paniculata_contig2659:8996..10077- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2659:8996..10077- >mRNA_H-paniculata_contig2659.7260.1 ID=mRNA_H-paniculata_contig2659.7260.1|Name=mRNA_H-paniculata_contig2659.7260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig2659:8996..10077- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |