mRNA_H-paniculata_contig2657.7255.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 108 bits (270), Expect = 6.990e-26 Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 1 KMWWLDGEKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLV 237
KM WL ++V+ Q+DGA+PHT KG P+ N+AG GW V+LVTQPAQSPDLNINDLG FASLK RVWG ++D+LV
Sbjct: 286 KMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: A0A7S3GU94_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GU94_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 2.130e-21 Identity = 44/119 (36.97%), Postives = 70/119 (58.82%), Query Frame = 1
Query: 1 KMWWLDGEKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGT--VDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
KM W+ ++ Q DGA PHT G + + GW + +V Q AQSPDLN+ DLG+F SLK +V + G +D+L+ V+ +Y Y+ DTL+++W + +++RA+G N +
Sbjct: 6 KMPWMRNRRLKIQHDGARPHTAGGLEDEVHATASTEGWHITMVRQRAQSPDLNVMDLGLFHSLKVQVIQLKDGAHNIDELIQKVRVVYQQYSRDTLDQIWGHQVACWTEIMRAMGSNQY 124
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: A0A7S2FC44_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FC44_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.270e-16 Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 19 GEKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYG-TVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
G + Q+DGA PHT T G G+ +K+ TQPAQSPDLN+NDLG F SLK +V++++ ++ Y+ D L+R++ SL Y+ +L+ G NDF
Sbjct: 29 GTPIWIQQDGAKPHTAAET--WLKGQGKKEGFDLKVTTQPAQSPDLNVNDLGFFRSLKCAATNVAEAFSVEEMIKYIRQAYEEMPADKLDRMFMSLINNYRLLLKHDGDNDF 138
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: A0A081AWC8_PHYPR (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora parasitica P1976 TaxID=1317066 RepID=A0A081AWC8_PHYPR) HSP 1 Score: 75.5 bits (184), Expect = 4.370e-15 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 10 WLDGEKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
W D + AQ+D A H P AG +GGW ++L+ QP SPDLN DLG+FASL+S + +++DL+D V Y + DT++ ++ +L VL GGN +
Sbjct: 2 WRD--PIFAQQDNAKAHISPFDPDILA-AGLEGGWSIRLIFQPPNSPDLNALDLGLFASLQSIQYHLPIYSIEDLIDAVDDAYMQISTDTIDDIFLTLQACMLCVLEEDGGNHY 112
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: UPI00104066C4 (uncharacterized protein LOC114370211 n=1 Tax=Glycine soja TaxID=3848 RepID=UPI00104066C4) HSP 1 Score: 78.6 bits (192), Expect = 4.610e-15 Identity = 39/111 (35.14%), Postives = 61/111 (54.95%), Query Frame = 1
Query: 19 GEKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
G + Q+D A H D GT G+ ++L+ QPA SPDLNI DLG F++++S R +VD+L++ VK +D Y +E VW +L +++L+ G N +
Sbjct: 139 GSAIFIQQDNARSHVDPNDEDIIR-VGTQNGFNIRLMCQPANSPDLNILDLGFFSAIQSLQQKVRANSVDELIEAVKKSFDEYPTKKVEYVWLTLQLCMREILKVEGSNRY 248
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: UPI00053F7236 (uncharacterized protein LOC104908485 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F7236) HSP 1 Score: 78.2 bits (191), Expect = 5.480e-15 Identity = 35/110 (31.82%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 22 EKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
+++ Q+D A H +G +A A T G+ +KL+ QPAQSPDLN+ DLG F ++++ ++ +D+L++ V+ YD ++ + ++ W L ++L+ GGN++
Sbjct: 124 KEIFIQQDNARAHI-QGNDEAFKAAATQNGFNIKLIQQPAQSPDLNVLDLGFFRAIQALMYQTFPKNIDELIENVQDAYDKFDPNVVKYTWLKLHWVMVEILKVKGGNNY 232
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.790e-14 Identity = 41/106 (38.68%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 28 VIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGN 345
+ Q+DGA PH G P+ +A + G +KLVTQPA SPDLNI DLG FA++++ + + T+D+ +D V + D L+ VW SL R ++ G N
Sbjct: 272 LYIQQDGARPHCTDGCPELVASAASF-GLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDN 376
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: UPI001C26D651 (uncharacterized protein LOC121757666 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C26D651) HSP 1 Score: 77.8 bits (190), Expect = 2.530e-14 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 28 VIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
+ Q+D ATPH P+ A +D G+R+KL+ QPA SPD NI DL F +++S + ++ TVD+LV V S + + TL RV+ SL ++LR GGN +
Sbjct: 420 IYIQQDNATPHITAMDPEFQAVANSD-GFRIKLICQPANSPDTNILDLSFFRAIQSLHYEKQCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILRCRGGNGY 526
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: W2QBI0_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QBI0_PHYPN) HSP 1 Score: 76.6 bits (187), Expect = 4.490e-14 Identity = 39/110 (35.45%), Postives = 60/110 (54.55%), Query Frame = 1
Query: 22 EKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
E + ++D A PH P AG +GGW ++L+ QP SPDLN+ DLG+FAS++S + DL+D V Y + DTL+ ++ +L +L+ GGN +
Sbjct: 211 ESIDREQDNAKPHISPFDPDILA-AGLEGGWSIRLIFQPPNSPDLNVLDLGLFASIQSLQYRIPIYKFTDLIDAVDDAYKTMSADTLDDIFLTLQSYMLCILKEDGGNQY 319
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Match: UPI00053F8527 (uncharacterized protein LOC104897330 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F8527) HSP 1 Score: 76.6 bits (187), Expect = 6.310e-14 Identity = 39/116 (33.62%), Postives = 66/116 (56.90%), Query Frame = 1
Query: 10 WLDG--EKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDLNINDLGIFASLKSRVWGERYGTVDDLVDGVKSMYDAYNVDTLERVWQSLFERYKQVLRAIGGNDF 351
W +G +++ Q+D A PH PQ A T G+ ++L+ QPAQSPDLN+ DLG F ++++ + +D+L+ V+ YD ++ + L+ W L ++L+ GGN+F
Sbjct: 358 WPEGVSKEIYIQQDNARPHIHASDPQFIA-AATQNGFNIQLINQPAQSPDLNVLDLGFFRAIQALQYQSFPKNLDELILRVQDCYDFFDPEVLKYTWLQLQYVMVEILKCKGGNNF 472 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2657.7255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2657.7255.1 >prot_H-paniculata_contig2657.7255.1 ID=prot_H-paniculata_contig2657.7255.1|Name=mRNA_H-paniculata_contig2657.7255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp MWWLDGEKVIAQEDGATPHTDKGTPQASNNAGTDGGWRVKLVTQPAQSPDback to top mRNA from alignment at H-paniculata_contig2657:4383..4736- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2657.7255.1 ID=mRNA_H-paniculata_contig2657.7255.1|Name=mRNA_H-paniculata_contig2657.7255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=354bp|location=Sequence derived from alignment at H-paniculata_contig2657:4383..4736- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2657:4383..4736- >mRNA_H-paniculata_contig2657.7255.1 ID=mRNA_H-paniculata_contig2657.7255.1|Name=mRNA_H-paniculata_contig2657.7255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=702bp|location=Sequence derived from alignment at H-paniculata_contig2657:4383..4736- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |