mRNA_H-paniculata_contig2650.7236.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2650.7236.1
Unique NamemRNA_H-paniculata_contig2650.7236.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: A0A6H5KL44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL44_9PHAE)

HSP 1 Score: 465 bits (1197), Expect = 1.740e-155
Identity = 227/323 (70.28%), Postives = 272/323 (84.21%), Query Frame = 1
Query:  169 ANLTSLRSFELEEVLKDEDDGRVVTLLGRFSWQGEGEMALAKLISTPLTLDGLLKNLGQLALTLKNDSGAQYAFYNCAISPWDTFLRGLQASSYSLEVVAPASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTR---LHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDALHTALK-AGE 1125
            A + SLR FE EEVLKDEDDGRVVT LGRF+WQ EGE+AL KLI+ PL+L GL  NL +L++ LK+DSGA+Y+FY+C++S W TFLRGL+ +SYSLEVVAPASE+ VNR+R + T M TET E++  VT P++++++ +  SLSWL+NVLSKEKEA+RVLYED+D EHGFL+N+DTKWRTHPD+ T PR +W  HPSV +LYCL I H+RGIRT+RDLRA H+PML+E+Y RGVETIE VYGVPE QLRVFVHY+PQFFHFHVHFTR   LHNTIGVE ERAHLL+DIIQNLE DS FYE RT+QF +RENDALHTA K AGE
Sbjct:   44 AGIRSLRGFEPEEVLKDEDDGRVVTFLGRFAWQKEGEVALVKLIAKPLSLSGLKDNLSRLSIRLKSDSGAEYSFYDCSLSLWYTFLRGLEGNSYSLEVVAPASERTVNRNRPVTTAMLTETAEMHASVTGPHMDRIVGDGKSLSWLFNVLSKEKEAERVLYEDEDPEHGFLLNIDTKWRTHPDISTTPRHEWEGHPSVGELYCLAISHQRGIRTLRDLRAKHVPMLKEIYGRGVETIEAVYGVPEDQLRVFVHYMPQFFHFHVHFTRRVVLHNTIGVEAERAHLLVDIIQNLERDSYFYETRTMQFGVRENDALHTAFKNAGE 366          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: A0A0M0JXI4_9EUKA (Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXI4_9EUKA)

HSP 1 Score: 276 bits (706), Expect = 2.830e-83
Identity = 144/301 (47.84%), Postives = 203/301 (67.44%), Query Frame = 1
Query:  235 VVTLLGRFSWQGEGEMALAKLISTPLTLDGLLKNLGQLALTLKNDSGAQYAFYN--CAISPWDTFLRGLQASSYSLEVVAPASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDV--ETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDALHTALKAGE 1125
            ++ +LGRFSWQ +GE AL KL+  PL+L   L  LG L + + + SGA+Y +Y+  C++S   T   GL+ + YS+EV+APASEK + R R     + TE   +Y  V +P++  +  +  +++W+ N+L+ +KE +R+L+ D D E GFL+N+DTKW++HP    +   R  WR H SV DLYCL ICH+R +R++RDLRA HLP+LR +   G   IE VYGVP  +LRVFVHY PQF+HFHVHFTRLHN +G +VERAHLL  II  LE D   Y ++TL ++L+ ND L  A++A +
Sbjct:    1 MIVVLGRFSWQAKGETALVKLVPKPLSLASGL--LGALDVNVSSYSGAEYCYYDGRCSLSSLCT-TAGLRPA-YSVEVIAPASEKQIARLRPERGTLITEDAALYASVVQPFIESM--DPKAIAWVANLLALKKETERLLFNDSDPERGFLLNIDTKWKSHPPCVSDEFARVAWRCHASVQDLYCLAICHRRDLRSLRDLRARHLPLLRHILHEGCRVIEAVYGVPVDELRVFVHYQPQFYHFHVHFTRLHNDLGCQVERAHLLPQIIAELEADGDAYAKKTLWYQLKANDKLLEAIRAAD 295          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: A0A7S3SDN6_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SDN6_EMIHU)

HSP 1 Score: 258 bits (658), Expect = 3.440e-75
Identity = 146/322 (45.34%), Postives = 199/322 (61.80%), Query Frame = 1
Query:  160 RPQANLTSLRSFELEEVLKDEDDGRVVTLLGRFSWQGEGEMALAKLISTPLTLDGLLKNLGQLALTLKNDSGAQYAFYNCAISPWDTFLRGLQASSYSLEVVAPASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLP--REQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFY-EERTLQFRLRENDALHTALK 1116
            R  ++L  L SF+  EVL  E +G  V LLG FSWQ  GE AL K+ +       +  +L     +L + SGA+YA+Y  + S      +     +++LEV+APASEK + R R  P V  TET  +Y     PY++ +  +  S SW+   L   KEA+RVL+ D  E  GFL+NVDTKW++HP     P  R  WR H +V DLYCL ICH+R IR++RDL A HLP+LR +  +GV T+ + YGV    LRVFVHY PQF+HFHVHFTRLHN +G + ERAHLL ++I +LE D + Y +++TL ++L+ ND L   L+
Sbjct:   35 RGVSSLRDLSSFKQSEVLS-EGEGHAV-LLGAFSWQPAGERALVKISAVDRASSDVAAHL---ETSLSSYSGAEYAYYRGSASLASVLWK---RPAFALEVIAPASEKQIARSRPQPGVFVTETAALYHAAVAPYIDAL--DPKSTSWIDKCLDLSKEAERVLFNDPAEPTGFLLNVDTKWKSHPPCTADPQLRASWRGHTAVKDLYCLAICHRRDIRSLRDLTAEHLPLLRRILDQGVRTLCETYGVEPHDLRVFVHYQPQFYHFHVHFTRLHNDLGCQAERAHLLQEVIDSLEADGACYAQKKTLYYQLKANDRLLARLR 346          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: W7TMI8_9STRA (Histidine triad protein member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMI8_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.050e-73
Identity = 143/356 (40.17%), Postives = 212/356 (59.55%), Query Frame = 1
Query:  172 NLTSLRSFELEEVLKDE----DDGRVVTLLGRFSWQGEGEMALAKLISTPL-------------TLDGLLKN--------------LGQLALTLKNDSGAQYAFYNCAISPWDTFLRGLQASSYSLEVVAPASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDD----DEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLE---IDSSFYEERTLQFRLRENDALHTAL-KAG 1122
            NL  LR F +EEVL DE     DG  V LLGRF+WQG  E A+ K+    L             T  G+LKN              L  L+L ++ +SGA+Y +Y+ ++SP      G+  + Y +EV+APAS + + R  +   V+  E+P +Y +   P  ++V     SL W+YN+L  +KEA+R+++ED     D   GF++  D KW++HPD    P+E+WR HPS + L CL I H R I ++RDLR  HLP+L+ +  +G+  IE VYGV + ++RVFVHY+PQFFHFHVHF+RL+   G+EVERAHLL D+I+ +E   +   +YE  ++ + +++++ L+  L KAG
Sbjct:   38 NLIHLRDFIMEEVLTDEVTPSPDGYTV-LLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIPLT-YHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPVGEEYYENASISYTVKKSEELYGRLQKAG 391          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: A0A7S4D8L5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8L5_HETAK)

HSP 1 Score: 248 bits (634), Expect = 2.960e-72
Identity = 132/329 (40.12%), Postives = 193/329 (58.66%), Query Frame = 1
Query:  175 LTSLRSFELEEVLKDEDDGRVVTLLGRFSWQGEGEMALAKLISTPLTLDGLLKNLGQLALTLKNDSGAQYAFYNCAISPWDTFLRGLQASSYSLEVVAPASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDE-EHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLR-ATHLPMLREMYKRGVETIEQVYGVPEG-----------------QLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDALH 1104
            L  L  F+ EEVL D ++G+ V L G  +    G+ A+ K  S   T + LL NL    L L ++SGA+YA+++  I      +   Q  SY LE++ PAS++ + R   +P ++  ET + Y  +T PY+  V+ +  SL W+YN+L K+KE +R++Y+        F++N+DTKW+THPD +  PRE+W+D     D+YCL I   RG++++RDLR A HLP+LR +   G+  +  +Y +P G                 QLRVFVHY PQF+HFHVH+    N +G   +RAHLL D+IQNLE+D  FY  RT+  RL+  D LH
Sbjct:    6 LKHLSGFQFEEVLTDNNNGQFVVLKGILN----GKPAVLKFNSLHATAEQLLSNLCSAKLDLHSESGAEYAYFHATIH---NGVSKKQNPSYHLEIICPASDRQIRRSTTVPLILVDETSKDYANITLPYIQSVIGDGGSLQWVYNILDKKKEVERIVYDTGGTGPEDFIINIDTKWKTHPDPKETPREKWKDLVKPEDIYCLGIVQLRGLKSLRDLRGAAHLPLLRRLAGEGLSQVAALYSLPRGPGGXXXXXXXXXARLRRQLRVFVHYQPQFYHFHVHYVHAANDLGATCDRAHLLTDVIQNLELDPDFYTTRTITHRLQVTDQLH 327          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: K8EMC5_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EMC5_9CHLO)

HSP 1 Score: 243 bits (620), Expect = 4.940e-70
Identity = 134/332 (40.36%), Postives = 196/332 (59.04%), Query Frame = 1
Query:  175 LTSLRSFELEEVLKDEDD----GRVVTLLGRFSW---QGEGEMALAKLISTPLTLDGLLKNLGQLALTLKND-SGAQYAFYNCAIS-PWDTFLRGLQA---------SSYSLEVVAPASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDALHTALK 1116
            L +LR F++ ++L D  D    G VV LLG F     + E E  + KL   P+ LD L +    + L  +   SG +Y +Y+  ++   +TF     +            S E  A    K ++R++    V++ E P+ Y     PY+  + S+  ++ W++ +L+KEKE +R+L++DDD   GFL+N D KW THPD +T P+EQW +HPS  +LYCL +CH++ +R++RDLRA HLPMLR M K+G E I+  YG+    LR+FVHY PQF+HFHVHFT +    GV  ERAHLL D+I+N+E DS  Y +R++  R+ END L    K
Sbjct:   10 LQTLRGFKVSKILNDGKDSSSFGNVVALLGTFPGLMEEEEEESVVLKLSRPPIPLDDLDQLADAITLYERMPYSGMEYGYYHGVVNNSSETFFAPYVSVDVLYPGCLKDESKEAKAKLLAKHISRNQAQRPVIFRENPKTYENAHLPYIEAIPSS--AIGWVHKILNKEKELERLLFDDDDVNDGFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMAKKGREVIKNTYGLANESLRIFVHYPPQFYHFHVHFTNVSVEHGVSAERAHLLDDVIENIERDSEHYAKRSITCRMGENDELWRRFK 339          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: C1MPA0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MPA0_MICPC)

HSP 1 Score: 239 bits (609), Expect = 1.090e-68
Identity = 135/325 (41.54%), Postives = 191/325 (58.77%), Query Frame = 1
Query:  175 LTSLRSFELEEVLKDEDDGRVVTLLGRFSWQGEGEMALAKLISTPLTLDGLLKNLGQLALTLKND---SGAQYAFYNCAISPWDTFLRGLQA--------SSYSLEVVAPASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDALHTALK 1116
            L SLR F+   VL D  +  VV LLG F   G    ++ KL   P+ L G L  L   A+TL      SG +Y +Y+  ++    F  GL          ++ S E  A    K V+R+     V++ E P  Y     PY++ + S+  ++ W+Y +L+KEKE +R+L++DDD   GFL+N D KW THPD +  P+EQW +HP   +LYCL +CH++ +R++RDLRA HLPMLR M ++G E I+  YG+ +  LR+FVHY PQF+HFHVHFT +    GV  ERAHLL D+I+N+E DS  Y + ++  R+ END L    K
Sbjct:   13 LPSLRGFKTSRVLNDGKESGVVALLGTFP--GCDTESVVKLSRPPIPL-GDLDGLAT-AVTLSERAPYSGMEYGYYHGVVA--SEFAPGLSVDVLYPGCLANESEEARAKLLAKHVSRNASQAPVVFRENPRAYAAAHLPYIDAIPSS--AIGWVYKILNKEKELERLLFDDDDANDGFLVNTDPKWVTHPDPKATPKEQWMNHPGTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMARKGREVIKNTYGLADESLRIFVHYPPQFYHFHVHFTNVSVDHGVSAERAHLLDDVIENIERDSEHYAKCSITCRMGENDELWRRFK 329          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: A0A7S2XNU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNU1_9STRA)

HSP 1 Score: 235 bits (600), Expect = 2.660e-67
Identity = 121/276 (43.84%), Postives = 173/276 (62.68%), Query Frame = 1
Query:  325 LLKNLGQLALTLKNDSGAQYAFYNCAISPWDTFLRGLQ--------ASS----YSLEVVAPASEKVVNRHRMLP-TVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDALHTAL 1113
            +L  L      L ++SGA+Y++Y    +P   F  G          ASS    + +E+++PA+ + + R    P T +  ETPE+Y  VTEP++  +     SLSW+ NV+  +KE +R+L    D    F++NVDTKWR+HPD  + PR +W  HP+  DLYCL I  + G+RT+RDLR  H+PML+ M + G + I+ +YG+   Q+RVFVHY PQF+HFHVHFTRL N +G  VER HL+ DI+QNL +DS +Y++RT+ FRLR  D L+  L
Sbjct:   58 VLSFLSDFHFRLTSESGAEYSYYEALPTP--IFSEGQVERTPTFPGASSTQGGFKMEMISPATYRQIARAMPAPSTALVNETPEMYQTVTEPFIASICEGN-SLSWICNVVDAKKEVERLLVNHKD----FVLNVDTKWRSHPDALSTPRSEWYQHPATADLYCLGIVKQSGLRTLRDLRGEHVPMLKAMMQEGTKAIQTIYGIESNQIRVFVHYQPQFYHFHVHFTRLENEVGCSVERGHLVSDIVQNLGMDSDYYKKRTISFRLRTTDTLYKQL 326          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: C1E275_MICCC (Uncharacterized protein n=2 Tax=Micromonas TaxID=38832 RepID=C1E275_MICCC)

HSP 1 Score: 224 bits (570), Expect = 5.140e-63
Identity = 131/328 (39.94%), Postives = 186/328 (56.71%), Query Frame = 1
Query:  175 LTSLRSFELEEVLKDEDDGRVVTLLGRFSWQGEGEMALAKLISTPLTL---DGLLKNLGQLALTLKND---SGAQYAFYNCAISPWDTFLRGLQASSYSLEVVAP---------ASEKVVNRHRMLPT----VMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDAL 1101
            L SLR  +++ VL D  +  VV LLG F+  G    A+ KL   P+ +   D L +     A++L      SG +Y +Y+ A+ P       L A   S++V+ P         A EK++ +H    T    V + ET E Y     PY+  +   E ++ W+Y +L+ EKE +R+L+ D  E+ GFL+N D KW THPD  T P+  W+ H S  DLYCL +CH+R ++++RDLR  HLPMLR M + G   I   YG+ +  +RVFVHY PQF+HFHVH+T +   IGV+ ERAHLL D+I N+E DS  Y +  +  R+ END L
Sbjct:   14 LPSLRGLKVDRVLNDGKESGVVALLGTFA--GCSTQAVVKLSRPPIPVGDPDALSR-----AISLSERAPWSGMEYGYYHGALDP-------LFAPGLSVDVLYPGCLYDESEEAREKLLKKHISRNTAQAPVAFRETVEAYENAHVPYIRAI--PEGAVGWVYKILALEKETERLLFNDPTEDAGFLLNTDPKWTTHPDHNTTPKAAWKGHASTRDLYCLGLCHRRDVKSLRDLRREHLPMLRAMAETGRRVIRDTYGLEDHSVRVFVHYPPQFYHFHVHYTNVAVDIGVQTERAHLLDDVIDNIERDSEHYAKCAITGRMGENDEL 325          
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Match: A0A7S0AGM9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGM9_9STRA)

HSP 1 Score: 220 bits (560), Expect = 6.860e-63
Identity = 103/224 (45.98%), Postives = 152/224 (67.86%), Query Frame = 1
Query:  436 QASSYSLEVVAPASEKVVNRHRMLP-TVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVLSKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTDLYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRVFVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERTLQFRLRENDALH 1104
            +A S+++E ++PAS++ + R    P TV+  ET E+Y  V +P++  +++   SLSW+ N++   KEA+R++ + DD    +++N+DTKWR+HPD  T PRE+W  H S  DLYCL I    G+  MRDL+  H+P L+ M   G+  IE+ YGVP  Q+R + HY+PQF HFHVH+TRL N IG +VER HL+ DIIQNLE+D  +Y +RT+ ++LR  D L+
Sbjct:    4 KAGSFTVEFISPASDRQIQRASPSPRTVLVEETAELYDAVVKPHIQAIVAGG-SLSWVKNIVDGTKEAERLILDTDD----YIVNIDTKWRSHPDPNTTPREEWLHHSSTADLYCLGIFKADGVACMRDLKVEHVPTLKSMVDEGIAAIERTYGVPRDQIRCYCHYLPQFMHFHVHYTRLENEIGCQVERGHLVSDIIQNLEMDPDYYSKRTITYKLRVTDELY 222          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2650.7236.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL44_9PHAE1.740e-15570.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0M0JXI4_9EUKA2.830e-8347.84Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochro... [more]
A0A7S3SDN6_EMIHU3.440e-7545.34Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
W7TMI8_9STRA1.050e-7340.17Histidine triad protein member n=2 Tax=Monodopsida... [more]
A0A7S4D8L5_HETAK2.960e-7240.12Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K8EMC5_9CHLO4.940e-7040.36Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
C1MPA0_MICPC1.090e-6841.54Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S2XNU1_9STRA2.660e-6743.84Hypothetical protein n=1 Tax=Attheya septentrional... [more]
C1E275_MICCC5.140e-6339.94Uncharacterized protein n=2 Tax=Micromonas TaxID=3... [more]
A0A7S0AGM9_9STRA6.860e-6345.98Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2650contigH-paniculata_contig2650:261..10272 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score482.3
Seed ortholog evalue2.1e-133
Seed eggNOG ortholog2880.D8LCA8
Preferred nameDCPS
KEGG rclassRC00002
KEGG koko:K01301,ko:K03494,ko:K12584,ko:K12860
KEGG ReactionR04368,R06153
KEGG Pathwayko00601,ko01100,ko03018,ko03040,map00601,map01100,map03018,map03040
KEGG ModuleM00353,M00355
Hectar predicted targeting categorysignal anchor
GOsGO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000340,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004779,GO:0004780,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006163,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009117,GO:0009150,GO:0009259,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010629,GO:0010941,GO:0016070,GO:0016071,GO:0016462,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016819,GO:0019219,GO:0019222,GO:0019439,GO:0019637,GO:0019693,GO:0030234,GO:0031086,GO:0031323,GO:0031325,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032069,GO:0032075,GO:0032991,GO:0033554,GO:0034641,GO:0034655,GO:0035690,GO:0035770,GO:0036245,GO:0036464,GO:0042221,GO:0042493,GO:0042594,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044692,GO:0045292,GO:0045935,GO:0046483,GO:0046700,GO:0047627,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050072,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051716,GO:0055086,GO:0060255,GO:0060548,GO:0060700,GO:0065007,GO:0065009,GO:0070013,GO:0070566,GO:0070887,GO:0071310,GO:0071496,GO:0071704,GO:0072521,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098772,GO:0140098,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1901917,GO:1901919,GO:1905777,GO:1905779,GO:1990904
EggNOG free text desc.m7G(5')pppN diphosphatase activity
EggNOG OGsCOG5075@1,KOG3969@2759
Ec32 ortholog descriptionHIT-like domain
Ec32 orthologEc-14_005450.1
EC2.4.99.4,3.4.17.21,3.6.1.59
COG Functional cat.M
CAZyGT29
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01003,ko03019,ko03041,ko03400
Exons7
Model size2293
Cds size1119
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929794.661298-UTR-H-paniculata_contig2650:260..2781622929794.661298-UTR-H-paniculata_contig2650:260..278Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2650 261..278 +
1691481013.9118757-UTR-H-paniculata_contig2650:260..2781691481013.9118757-UTR-H-paniculata_contig2650:260..278Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2650 261..278 +
1622929794.8351793-UTR-H-paniculata_contig2650:9116..102721622929794.8351793-UTR-H-paniculata_contig2650:9116..10272Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2650 9117..10272 +
1691481013.9780667-UTR-H-paniculata_contig2650:9116..102721691481013.9780667-UTR-H-paniculata_contig2650:9116..10272Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2650 9117..10272 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929794.7022843-CDS-H-paniculata_contig2650:278..4821622929794.7022843-CDS-H-paniculata_contig2650:278..482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 279..482 +
1691481013.925029-CDS-H-paniculata_contig2650:278..4821691481013.925029-CDS-H-paniculata_contig2650:278..482Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 279..482 +
1622929794.7199562-CDS-H-paniculata_contig2650:1792..18921622929794.7199562-CDS-H-paniculata_contig2650:1792..1892Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 1793..1892 +
1691481013.9325922-CDS-H-paniculata_contig2650:1792..18921691481013.9325922-CDS-H-paniculata_contig2650:1792..1892Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 1793..1892 +
1622929794.7534084-CDS-H-paniculata_contig2650:4980..50971622929794.7534084-CDS-H-paniculata_contig2650:4980..5097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 4981..5097 +
1691481013.940068-CDS-H-paniculata_contig2650:4980..50971691481013.940068-CDS-H-paniculata_contig2650:4980..5097Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 4981..5097 +
1622929794.7764108-CDS-H-paniculata_contig2650:5668..58951622929794.7764108-CDS-H-paniculata_contig2650:5668..5895Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 5669..5895 +
1691481013.9475086-CDS-H-paniculata_contig2650:5668..58951691481013.9475086-CDS-H-paniculata_contig2650:5668..5895Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 5669..5895 +
1622929794.7883558-CDS-H-paniculata_contig2650:6963..71571622929794.7883558-CDS-H-paniculata_contig2650:6963..7157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 6964..7157 +
1691481013.955123-CDS-H-paniculata_contig2650:6963..71571691481013.955123-CDS-H-paniculata_contig2650:6963..7157Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 6964..7157 +
1622929794.80781-CDS-H-paniculata_contig2650:8038..81461622929794.80781-CDS-H-paniculata_contig2650:8038..8146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 8039..8146 +
1691481013.9627576-CDS-H-paniculata_contig2650:8038..81461691481013.9627576-CDS-H-paniculata_contig2650:8038..8146Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 8039..8146 +
1622929794.8231528-CDS-H-paniculata_contig2650:8947..91161622929794.8231528-CDS-H-paniculata_contig2650:8947..9116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 8948..9116 +
1691481013.9704142-CDS-H-paniculata_contig2650:8947..91161691481013.9704142-CDS-H-paniculata_contig2650:8947..9116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2650 8948..9116 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2650.7236.1prot_H-paniculata_contig2650.7236.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2650 279..9116 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2650.7236.1

>prot_H-paniculata_contig2650.7236.1 ID=prot_H-paniculata_contig2650.7236.1|Name=mRNA_H-paniculata_contig2650.7236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=373bp
MEFPANIMREIVSLPSAVYITGVCGVAALSLGIYWGIRGRALADHGNRPQ
ANLTSLRSFELEEVLKDEDDGRVVTLLGRFSWQGEGEMALAKLISTPLTL
DGLLKNLGQLALTLKNDSGAQYAFYNCAISPWDTFLRGLQASSYSLEVVA
PASEKVVNRHRMLPTVMWTETPEVYTMVTEPYVNKVLSNEFSLSWLYNVL
SKEKEADRVLYEDDDEEHGFLMNVDTKWRTHPDVETLPREQWRDHPSVTD
LYCLVICHKRGIRTMRDLRATHLPMLREMYKRGVETIEQVYGVPEGQLRV
FVHYIPQFFHFHVHFTRLHNTIGVEVERAHLLLDIIQNLEIDSSFYEERT
LQFRLRENDALHTALKAGEILL*
back to top

mRNA from alignment at H-paniculata_contig2650:261..10272+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2650.7236.1 ID=mRNA_H-paniculata_contig2650.7236.1|Name=mRNA_H-paniculata_contig2650.7236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10012bp|location=Sequence derived from alignment at H-paniculata_contig2650:261..10272+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGACATATCACTTCATCATGGAATTCCCTGCGAACATCATGAGGGAGAT CGTGAGCTTGCCCAGTGCAGTGTATATTACGGGCGTGTGCGGTGTTGCCG CCCTTAGTCTAGGGATTTACTGGGGCATCCGAGGCAGAGCGCTTGCAGAC CACGGCAACAGGCCGCAGGCGAACCTCACCAGTCTCCGAAGCTTCGAGTT GGAGGAGGTTTTGAAAGACGAGGTATTTTGCACATCACGACGAAGGGTCG GCAGCATGACTTATCTTCATTGAGTTGAGCATGGCGAGGTCTAAGAGAAA TTTCTTGTCCAGCATATGCAAACGCCCTGGATAATTGAATCACGCTCAGA ACTACCGCCAGCTTTAGATACTCTGCTCACAGCGACAAACTCAAAATTGT GATTGCTCGAGATTTTGCATCGCTGAAATTTTAAGTTTGCAACCTCGAGG TGTCTTAGTTAATAACAGAACCAGCTCGCTATTGAGAAACAGAGTCAAGA GAAACTGAGGCTGAGGTTCACGAAAAGTAAGAAATTCGGCCTAAGAAATG AACCTCGAAATCTGCCACAAGATAAGGAACAACCAAATAAAAAACGGGCA TTTTTCATGTTCAAAGCATACGAACCCGTCTGGCACCTTGAAGCCATGGG CATGGGTGGCATCTGCTGATACAAATATCCCCATCGTCACATTTGAGGGT GAGTGGTGTGTGAATATTCGTTTCATGACGCTACCCGCTACCATGCACGC CTCAATCAGAACCCGGTGACAATCCAAAAGACACCCTGCCAGTGTTCGCC AGTAATCAATAAGAAATAGGAAAATACAGCCGGTCAGAACCTTCGCCGAA TAAGAAACAGGCAAATAAGTAAACAGCTGGAAGCCGGCGAAAAATTAAGA CATAAAGCCTGGGCCTAAATTAACGTTTCTTCTAAGCGAGCCGGTTTTGT GGTAGGAATGGCGCTAAATGAGAGATCCGGCCGCGGCAGAGCGGGTACGG ATCCCCCTTCTCGGTAGCGACGGAACAACTGTGGGTTGTCTCTCTCTTTG GGGTAGGCAACACACGCGACCTGAGGCACGTGACACGTAGACAAGACTCT GACTGGGCCGATTGTGGTCAAATATATTGTGTTCGTATATTGGAGTAGTG AGCGGGTAGGGGGGCGGTGTAAGAACCCTCCCCAGTCGCTCAGGAGAATG ACAGTTACCCGGATAGGGCTAGACAATGACCCCAGATACCCACATTTCTC GTACAGACGGTAAGGCGTGCCAGGAATGACTGAGGCTGTTACCCACATAA ACTAGAGTACGTGCACATTTGTGATACACCATTTGCTGTTGATCTGGTGC CTATTCCGGCACGAAAAAAAATATGGTACAGTACATGGCTGACCCTCAGC GTGTTCATTCCTCAAATTGGTGCGGCAAGCAAAATCGAGGTCGGCGTAAA ACTTAGTCAAGAGTGTTCTACAAGTAGGAGAGTCTCAATATGCATACATG ATCGTCTATTGTATGTCATGCGTTGCATTCAGGACGATGGGCGTGTGGTG ACTCTGCTCGGCCGCTTCAGCTGGCAGGGTGAGGGAGAGATGGCACTTGC CAAGCTCATCTCCACCCCACTGACGTTGGACGGTGAGGCTACCGTGCTGG TGTATGTGCAGTGTGATGGATATGTGGGCCGTGGCGCAATATCATGAGCA GCTTTATGTGGAGGCATCATAGCAACAAAACCTAAAGCTTTATAATAAAG TAAAGCTCTACAGACAGTACAGCGTAGTGATTTGTCATTGGCCGCTAGAG AGATTCGGCAACAAAAAAATGGGCTAATCAGAGTTGACTCAGGATCAGAT TTTCGGTGTGATCCATGACATTTTACCCTACTTTCACCCTGGGCGGGGGT CCTAAAAACTCAGAGTGGCGAGTCAGGAAATGAACTCTTTCCCTGAGTGT GTTTGTTCTGACTCAGGCTTAGGATTTGCGAACCGCAACACGTCAACTCG ACACACATGCACAGGTGCACAAAGACAGAGCCAATTAAACGCACATCGAC TATAAAATAGCTGTTGTGTCGCTACAGGCCACAGATCCATCTCCCGAAAG CACTCGGGGACATGTGATGGTCAGATGCTCGCGGTTAGATGTAGAAACGA GTTTGCAACGCTCGCTTGGGTGACACCCCGCTAAAGACGAGTCTTGGCTT TGGATTTTGAAATCTGTCGTTTTGCCCACTCACGGGGATACCTCGCCCGC TCCACCAGACAAAAGGGAGAAGACGGCCCGAACAGAGGAATGATCTGTTC GCCAATTGTAGGGCTCCGATGGATGGTTGCCGTGCTGCCAAATACAGTAC AGTATGGTAAGATACTGCGTGGAGGGAAGCGGACACGCGATGGCCTAGTT TTTGCCTTGGCGACTGACTGTACTGTCGCGACTATTTTTCGGCTGACTTT TATTCAGAAGCTCATACGCATACTACTGTCTGCAGCTGCAGGGCTATCGT GCCGGTGGACCTTGTGCAAGCTGCACGAGGCGAGCGGATACTGTTGGCCC AGCCCCAATCGAATCTCCTGCTCGTGTCTGTGTGTTGGTGAAGCAAACAG TGCCACTTTCAAACTGCATATGCACGCGAAAAGTGAAAACACGGTTTAGA ACGGTCTGTGGACCAACAAAAGACTTTTCCATCATGTGGAATGTTAGTTG TACTATAGCTCCGTCATGTGCACGGCGGCATGCATGGCAGGGACGGCGTA GAGCAGGTTGACCACCCGCATAATTCAGTTCCATACCTCCATGGTGCAGC AAGACTGGGTGAACCTAGAATATAGTGCAAGCTCATATGCCCCAGCCGTT GAGGCTCTTTCACATCGGTATGTGACATACGAAATCCTGTACGGTGTAAC GGTGATCCGGTTGATATCCCTTCACCCCATATGCCAGCCACGTCATTGTG GGTTCCACCGCGTGTAAATCCTGAGAACTGCTGGAAATTTGGAACTACTA TTACTCAGGATTTTACCTGACCTTCAGTCAAATTCTGATCCAAAAAACAA ATTCCGCCGGCGGCAGGCTAACGTCATCGCTTAGATTACGTGTCGCTTTC AAGAATATCAGGGGCATATCCAACAATTTGATCAAATAAGGCCATATTTT ATGAGACCTGATCCCAATTTGAGAATCTGCTCCACAAATGTAGGTACAGT CACCAAGAGCAAATTCTTACGTTCAATTCGCCAAGGCTGTTGTATGAATA TGTTCATTTGCAGATTTCCTGCTGGATATTCGACTCTAGCCAGGACCATA TTCAGAACATATGTTGGGCTCATCAATCACATTGTTGAAAAAACACCTTT TTCAACAAGCTTTATCTACTTTTGTGGCACCAAACACGAATCGGCAGCTA CACAAAAGCGACACACGCGTCGGCCGAGACCACGTTTGCTGGAAGGCCCT CTTCGCGGGCAAACCCTGTTTGCCATTGGTCGAACGTAATGTTTGAGAGT TATTTTGTTTTATAGTTCATGCTTCGTGGTGCCCCGACGCGAGCAGGACC AGCGCTGGAACCAACAGTAACCCTATCTCTAACCCCCACCCCCTAGGTAC GATATGCTGGCAGATCTCAAAACCGCGCCTGGTGGTGCCGATCTAAGCAA AAACTGTTTGGGGCACAACTCGGAACCACCCAGACCAGAACGTTCTGATA ACTTTATGGGTACCCCAGTATGTTAAATTAGTGTACCCCAACCGTTGTGT TCGACCAAGTGGTAAACACTACTGTCGCGAGTAAAGTTTATTCCTCGGGC ATCTACTATACTCCCGTTCTACCCTCCATCACTAGCTAGGCGACCAAATG AACATAATGGGAGCGGAAAATAAAATATAAAGCAGTGAGTGTTTTTTAGG TGAAGGTTAGATATCTAACGTTCAGTTGCTAGCTTGGTACTGTGATCAAA GTACTACTCGGCAGGTCGACAACCACGACGACGCGTCGGCTGAGATCAAG TTTTACTGGAAACCCCTTTGTCGGACCAACGGCTTTTCTTTTCTCCGGGA CCTACTTCCCACTCCCATGTACATACTTGCAATAGGAGTTAGATATTTAT AGATATGAGAACGAAACGATAGGATTCAAGGCTTTCAAAAAGGTTGACTT ATGTCTCGACTAAACAGCACTAGAGTCTTGATATGGACAACGAAAAACCA ACGATTGTAGCTGAAAATAAGGCTGACACGCTATTTGTTTTTCTGCAACC CAGACAGACACCACCAGACGACAGACGGCAAGAGATAACGACAATACGTG CTCTTTTTCGTTCGTCTGTAGTCCGTTTTGCAATGTGGCGCCGAGGGATT GACAGTAGGTAGTACTGGTATCAATTCTTTAATACGTACGTAGCAGAGAC TAGCTGAATGGTTGCGCCGCTTGTACCGCGCGCCCCCAGTCTCGGGTGAG TTAAAAGAGGACGATCGGCTTTACGCCATTGTACGAAGCTTGTCGAGAAG GCCTGTGCGAGAGCTTTCGGAAACGAGAATATTTTGACGGTCGATTCACG TTTGGTGCTGCCGCGACTCGGTGGAAACCAACGCGAACCCTAGCCATATT TTACAAAGTGTGGGCTAATTAAAAGAGACGGTTTGCGATGAACTAGGGTA CGTTTGTATCTTTGCTGCTATAACTTTATCCTTCACAACCTCCGCTCCTT CCCTCGTACGCTTTCCAAAGGGCTGCTCAAAAACCTTGGCCAGCTGGCGC TGACCTTGAAGAACGACAGCGGGGCCCAGTACGCCTTCTATAACTGCGCA ATATCGCCGTGGGATACTTTCCTGCGCGGTCTACAAGGTAACATATAGCA TACTCGCATCGACAGCGGCAGCGGATGCCGGTGGTTTGTCGAGTGTTTTT CTTGCAAAATCTATTGGAGGGACCGGGCTTTTTTTTACGAGGAAGTGTTG ACGCGTCGACGGGAGGAACGTTTCGTGGGAGGCGGTTACGCGCAGAAGCC AGTAGCCGCCCGCTTTCATTGGGCTGCAGCGCTTCACTACCGCTCTGTTA GTCGGCAATGTTGACTTGAGAACCTTTCGTGAATCTAAAACTCCAGACTA GCGTACTCGCTCATGTCTGCGGGGGGCACTGCTATCAACATACGAACTAT GACCTTATTTTCGTTCGTGAACGTCATGCCGCTCTTGATTGTTGTGGCAC GGCGCTGGAGAAATCACAGAGCCCTACCGACGTTTGTGATGCTCATGGCG AAAATTCTACCCACGGCTTGACAAGAAATTGAAAAAACAACCAAAGCTAG CAATTTTCTCAACGCACAAACAACAAAAGAGACAAGCTTCCTGTTGCCGC CGCCACCGCCGCCGCCGCCTCCACTCTCCCTCTCTCGCACACCCACCCTC ACGACCAGCCTCATCCTACTCGCTCGAAGTCGTGGCGCCTGCTTCTGAGA AAGTTGTGAATCGGCACCGCATGCTGCCGACGGTCATGTGGACGGAGACG CCGGAGGTGTACACCATGGTCACGGAGCCCTACGTGAATAAAGTACTGAG CAACGAATTTTCTCTGTCATGGCTATACAACGTTCTGTCGAAGGAGAAAG AGGCTGACCGGGTTCTGTACGAGGACGACGACGAGGTGCAGAGTTGTACA AGTAGGGCGCGACTGCGCGATGTTCGAGTCACACTATGATTGAATGATAT TCCTAAGGATAGTAATACGATAGTCGCTGTATTCGTGGTTCCTAGTGTAT CGCACCTACAGGGATGAGTGTCCCCCCGGGACGGGAAACGGGAAAAATGG AAAAAAAGGAAGCAGACAATATGTACTAGAGCAAGGAGGTATAGTTGGGA AGGAAGTGGCGATCAACCATGCCCTACCGTACATGCTGTATATACAAGCG CCCTGATACGGGTGGCTGCAGATGATGATGATGTTCGACTGATGTGACAC GAAGAACCTTTGAAACGATTTCCTTTTTTACATCATGTATGTTGACAACT GTTTTAACGAACTGTGTGCATGCATACAAATTCGGGGCTGATCACAAAGA ATCGGGAAGGGGCTTGTTTTTTTATGCCTCTGTGGAGACACATCTTTCAA TTCATTGCGCTGGCACTGATACAACCCATAATTGACTTGGTTCGCATCAG GATATTGTGTAAACCTTGGTGACGACGCTCGAAGTACACGAAACAACTGA TGCGCCATGCTGTTGCTGCGTGATCTTTGGCACTGCCTTGGCTCACTGTC AGATTATACGCGTGTTGAGTGATTTTACTATCTGGATCCCTTGATTCCGC CTAAATATGTGTGATACAGACTGTATTGGCGTAACGGTTGCGAACATTCC TGGGAAATTCTCGGAGTTTTATTGTTCTGACTCTTATTCTCGATATGAAC CCGGTTCGAATCTACGTCAAATCTGTTTCGAATCTGCTTCTTGTTGCGGA GTGGTTGGGGGTAAGGACTGACCGAGCCAACACTCCCCCGTTTTGTCACT CTCTCGTCTCCACCCTAATAAAAGCTCCCAAACTCCTGTCCTTACGCTCG CGTTAGAAGTCCAAAACTGTTGAAGGCACGAGGCATCGAACACTCACGAC CTCCCCCGCTCACGCATCATTCGCCTCTTTCCTGTCTCCCCTACTGTACC GCCTCGCCCCGTCCGCTCCGGTATCCCGTATTTCTTGTTATCTTGTAAAA CAGGAGCACGGATTCTTGATGAACGTTGACACGAAGTGGCGCACGCACCC TGACGTTGAGACCTTGCCTCGCGAGCAGTGGCGTGATCATCCCAGCGTGA CGGATTTGTACTGCCTTGTCATCTGCCACAAAAGGGGCATTCGCACAATG AGGGATCTGCGCGCGACGCATCTCCCCATGCTTAGAGAGATGTACAAGTG AGAGCTTCTATTTTTAATTGTGTATTGGTGTTTTGGTGTGTCTCGCCAGA CAAAGGGCACGTTTCGCTGAGAGAATCAAGTGCTATGAATTCAGATTCCC CAACGTTATCTGGTGGTCCACGTATGCAATGTGTCTGTCAAATCGGAAGC CGGTGCTTGGATTTTATGGAGAAGTACAATATGGGATTATTGAGCATGAC TAAAGCTTACCGTACCGTGTAGCACGAGTAGCAATTTGAGGTCGGAAGGC GTGCAGCTTGGCATAGTTTGTATTTCGTATCCCAACATCTTTAACATCCC AAGCGTCGTACTATTTTTATATCTTCTCAATTTCTTGTTATTTTATTGAA ACAGCTATATATGTGTGTACATGTATCTCTGTTGTTACGAGTCATTTGTA ATGGCGTTATGACATGGCCTTATTTGTGCTGCTGACTGGGTAGGATAGTG GTGATAATATTCTTCTATTCATACCAGAATTCACTGTGAGGTTCCTACTC TTCCATCATTTTCCGGAGAGGGTGACTGCCCTCGCCGGCCGCTGACCGAT TCGACTCCCTTCGCATATGTTTATACCCGTTAGGTTCTCTTTCAAGAGGC GGCTCCTAGGATCCTTCACACAACCAGCACATTAGTCACGTCAGGATTTG AACCCCGAACCCTTTTCCGTCAGTACGGACAACTCACCACTTGCTTTACT GAGTTCGCGCTGGCAAAGTGTCCTGTTCGCAAAAAGGCTCATCTGGGTGA ACAACTAACTGCTCTGCCTCCCGTGTTTGATAGCGTTTGACGCATTATTA TCCCCCGAGCCCAGCCAAATAAATATTTCATATTCTGTGGAAAGGCTGAA ACCGAACCTTGAATCGCGCACGACACAGGCGAGGCGTGGAGACCATTGAG CAAGTCTACGGAGTGCCCGAGGGCCAGCTGAGAGTGTTCGTGCACTACAT ACCGCAGTTCTTTCACTTTCATGTGCACTTCACAAGGTGAACAAGATGGG GTTACTACTGGTGGTGGTTTGCGTTGGGGGGTGACGGGGGGGGGGCGGGG CGGGGGGGCGCTGTAAGCGGGTAGTCGTCTGCGCACTGGGAACATTGGTT CGAGGGTGATATCGCTGTACATAGCGTTGTAGCAAGAGGAATACAAACGA AAATCCTATGACACTTGTATTTAGTATCATATTCTGAAACGCTCAATAGA AAAGCAGTCATTGGTGAGCCGCTAGATATCCTTGACAAAATTGAGACAAT CGAATCCATCGAGAAGCTTTGGACTGAGGGTCGGTATCCTGCGCTGCTGC GCTCAGTAATATGTGGGGGTATGCGTGCTTGTTGAACGCTTGAAGAAATG AAAGGGTCATGCCTCGGAGGGCCAAAAGTACTGCTGCGTTGAAGACGTGC CACATGCTTCACCGGTGGCCTTGTCCCTGGGGCCACTAGAATGCATCTAT CGCGTGAACGGGTCAAGAGTCGTTACTGCTGCCGCTCTGTTGGCGGGTGT TTTCTTGAGGCAACGCGCCCACAAAACAATGGGCTATACGTAAGCTGAAG TTCACGCAGTACAGTCGAACGAGCCAGCGGTGGCTACACGTAAGCCTACG CTAATGAAGTTCAGGCTGTGCAGTCGAAGGAGCAGCGGAAGGGAACTGAT CCGAGAAAAGATCAAGACTTGCGAAAGTTCGAAAGTATGTTTTCTTTTAT TGAATCGTGCTTGATCGTTTGCTTGCCTCGTCGTTGGCTTATTTTCTCTG CCCTTTCATGTTTTTTCGCTGAATGCTGCTCTTGAAGGCTGCACAACACA ATCGGGGTCGAGGTGGAAAGGGCACATCTGCTTTTGGATATAATCCAAAA CTTGGAAATCGACAGCAGCTTCTACGAGGAGCGCACCCTGCAGTTCAGGC TGCGCGAGAATGATGCCCTCCACACCGCGCTCAAGGCCGGAGAAATTTTA CTCTAGCATCGCAAGTAACGCCGCCTCTCATGGCAGTTCCATGTTGAACA TGTCATGTTTGGAACACAGTCACAGGCCACTTTATTTTTTTTTCCCAATG AAAGAACGCCATTTGTTTACACCATGAGAAGGAGCCTAATGTGAGGGGTT ATCGCCGGACCGGAAAATCCAGTCTTGGCCAACCAGTCATTGGATGAAGA ACCTCACCGTACGAGCCCAGTCATCGCTGGCGGTGATATGATATTCTGAC GGGGCCGACCGGTCAACCGTCGAATTTCTGACCGGGCCGACCAGGCACCA AGATAATCTTGGCGGGGCCAAGCTGGCACCGCTGATGAATGGCGTTTGGA AATTCTGATGTCGCCGAGCCGGGCACTCACGAATTCCTGAGGCGACAATC CTGACGGGGGCGAGTCAAGCACAGCTGGTGGATAGCGATATGAAACCCTG ACATGGTTGATTCGCCATCCACGAACTCCTGACCGAGCAAAACCCCGGCA CCTACCGCGACGACAATGCTAGCGGGATCAACGATGTGTCCCTGACGGAT GGAGTTTTTTGTAGTAAAGAACGGATCTGCGCACTCGAGGAAATGGATTC GTGATTCGATTTTTTGTTTATGGCACAGATGGGACGTACTGGTCGATAGT GTTTTTGTTCACTTTCGGTGTTTACCGCGTTTGTGCGTACGCAAAATGCA ATACCTGCTGATCAGCGAATGCACGTGTAATTCTTGAAGGTAGGCATTAT TGCTATTTATTTCGTCTTGATTGGTCGACCAGAGCGAAGGTGGCTTGGAT CGCAGCGTGTGTTGTTGAAGGGACTAATTCTTTGTATGTCTGTGTTGATC ATTCACTCACGGCATACCCCATGAAGGAGGTATCCATCTACTGAATGGCT ATTGTTGGATGTAGCTGGTTTTTTTGTGGAGCAAAGACTAGAGCAGTTGG ATTGAATGCAATACATTACCTATTTCCGTAGCTGGGGGGCTTGAGATTCC TAATTCTTTTCTGCAAATTTGTTGAGGATGTTAGCTGTGCTGTTTGATGT CAATTGACTCGATCGAGAGAACAGCACATCGCGGTCACTTCGAGCTAAGA CATATGCATGTACCACAACAGACGGGAGCTGACAAAATGACTGACGAAGT CCCCGATGCAGC
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2650:261..10272+

>mRNA_H-paniculata_contig2650.7236.1 ID=mRNA_H-paniculata_contig2650.7236.1|Name=mRNA_H-paniculata_contig2650.7236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2238bp|location=Sequence derived from alignment at H-paniculata_contig2650:261..10272+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAATTCCCTGCGAACATCATGAGGGAGATCGTGAGCTTGCCCAGTGC
AGTGTATATTACGGGCGTGTGCGGTGTTGCCGCCCTTAGTCTAGGGATTT
ACTGGGGCATCCGAGGCAGAGCGCTTGCAGACCACGGCAACAGGCCGCAG
GCGAACCTCACCAGTCTCCGAAGCTTCGAGTTGGAGGAGGTTTTGAAAGA
CGAGATGGAATTCCCTGCGAACATCATGAGGGAGATCGTGAGCTTGCCCA
GTGCAGTGTATATTACGGGCGTGTGCGGTGTTGCCGCCCTTAGTCTAGGG
ATTTACTGGGGCATCCGAGGCAGAGCGCTTGCAGACCACGGCAACAGGCC
GCAGGCGAACCTCACCAGTCTCCGAAGCTTCGAGTTGGAGGAGGTTTTGA
AAGACGAGGACGATGGGCGTGTGGTGACTCTGCTCGGCCGCTTCAGCTGG
CAGGGTGAGGGAGAGATGGCACTTGCCAAGCTCATCTCCACCCCACTGAC
GTTGGACGGACGATGGGCGTGTGGTGACTCTGCTCGGCCGCTTCAGCTGG
CAGGGTGAGGGAGAGATGGCACTTGCCAAGCTCATCTCCACCCCACTGAC
GTTGGACGGGCTGCTCAAAAACCTTGGCCAGCTGGCGCTGACCTTGAAGA
ACGACAGCGGGGCCCAGTACGCCTTCTATAACTGCGCAATATCGCCGTGG
GATACTTTCCTGCGCGGTCTACAAGGGCTGCTCAAAAACCTTGGCCAGCT
GGCGCTGACCTTGAAGAACGACAGCGGGGCCCAGTACGCCTTCTATAACT
GCGCAATATCGCCGTGGGATACTTTCCTGCGCGGTCTACAAGCCTCATCC
TACTCGCTCGAAGTCGTGGCGCCTGCTTCTGAGAAAGTTGTGAATCGGCA
CCGCATGCTGCCGACGGTCATGTGGACGGAGACGCCGGAGGTGTACACCA
TGGTCACGGAGCCCTACGTGAATAAAGTACTGAGCAACGAATTTTCTCTG
TCATGGCTATACAACGTTCTGTCGAAGGAGAAAGAGGCTGACCGGGTTCT
GTACGAGGACGACGACGAGCCTCATCCTACTCGCTCGAAGTCGTGGCGCC
TGCTTCTGAGAAAGTTGTGAATCGGCACCGCATGCTGCCGACGGTCATGT
GGACGGAGACGCCGGAGGTGTACACCATGGTCACGGAGCCCTACGTGAAT
AAAGTACTGAGCAACGAATTTTCTCTGTCATGGCTATACAACGTTCTGTC
GAAGGAGAAAGAGGCTGACCGGGTTCTGTACGAGGACGACGACGAGGAGC
ACGGATTCTTGATGAACGTTGACACGAAGTGGCGCACGCACCCTGACGTT
GAGACCTTGCCTCGCGAGCAGTGGCGTGATCATCCCAGCGTGACGGATTT
GTACTGCCTTGTCATCTGCCACAAAAGGGGCATTCGCACAATGAGGGATC
TGCGCGCGACGCATCTCCCCATGCTTAGAGAGATGTACAAGAGCACGGAT
TCTTGATGAACGTTGACACGAAGTGGCGCACGCACCCTGACGTTGAGACC
TTGCCTCGCGAGCAGTGGCGTGATCATCCCAGCGTGACGGATTTGTACTG
CCTTGTCATCTGCCACAAAAGGGGCATTCGCACAATGAGGGATCTGCGCG
CGACGCATCTCCCCATGCTTAGAGAGATGTACAAGCGAGGCGTGGAGACC
ATTGAGCAAGTCTACGGAGTGCCCGAGGGCCAGCTGAGAGTGTTCGTGCA
CTACATACCGCAGTTCTTTCACTTTCATGTGCACTTCACAAGGCGAGGCG
TGGAGACCATTGAGCAAGTCTACGGAGTGCCCGAGGGCCAGCTGAGAGTG
TTCGTGCACTACATACCGCAGTTCTTTCACTTTCATGTGCACTTCACAAG
GCTGCACAACACAATCGGGGTCGAGGTGGAAAGGGCACATCTGCTTTTGG
ATATAATCCAAAACTTGGAAATCGACAGCAGCTTCTACGAGGAGCGCACC
CTGCAGTTCAGGCTGCGCGAGAATGATGCCCTCCACACCGCGCTCAAGGC
CGGAGAAATTTTACTCTAGGCTGCACAACACAATCGGGGTCGAGGTGGAA
AGGGCACATCTGCTTTTGGATATAATCCAAAACTTGGAAATCGACAGCAG
CTTCTACGAGGAGCGCACCCTGCAGTTCAGGCTGCGCGAGAATGATGCCC
TCCACACCGCGCTCAAGGCCGGAGAAATTTTACTCTAG
back to top