mRNA_H-paniculata_contig265.7232.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig265.7232.1
Unique NamemRNA_H-paniculata_contig265.7232.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A6H5J7N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N0_9PHAE)

HSP 1 Score: 362 bits (929), Expect = 1.000e-124
Identity = 177/240 (73.75%), Postives = 199/240 (82.92%), Query Frame = 1
Query:    1 MGNSPPAPPPPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDYWRENREHVNEMERLKLVKKQERQRSAQIRK 720
            MGN  P PPPPSG+R+ +CKELFML NEN+EA WE FKQFDLKREGLI+R+AFFEGII+E+RNEFG+AIF L+DPEDEETLEFGEFVQA+CTFCCFC +DMLKFCFMVYDKDRSGL+E+EELHHFIK  VLHSSNV+NNIQ AM HLQLDE+GRLPFD          S +IMNKNFPQVLYP FRLQQSTQR ILGN WWK K+ EL +WRENREH           ++ERQR+AQIRK
Sbjct:    1 MGNKIPGPPPPSGERVARCKELFMLTNENIEALWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIK--VLHSSNVTNNIQGAMSHLQLDEHGRLPFD----------SFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKNKVNELGFWRENREHXXXXXXXXXXXRKERQRNAQIRK 228          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: D8LMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG3_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 2.170e-99
Identity = 143/182 (78.57%), Postives = 159/182 (87.36%), Query Frame = 1
Query:   70 MLKNENVEAFWETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKI 615
            ML NEN+EA WE FKQFDLKREGLI+R+AFFEGII+E+RNEFG+AIF L+DPEDEETLEFGEFVQA+CTFCCFC +DMLKFCFMVYDKDRSGL+E+EELHHFIK  VLHSSNV+NNIQ AM HLQLDE+GRLPFD          S +IMNKNFPQVLYP FRLQQSTQR ILGN WWK+K+
Sbjct:    1 MLTNENIEALWEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQAVCTFCCFCVTDMLKFCFMVYDKDRSGLMEMEELHHFIK--VLHSSNVTNNIQGAMSHLQLDEHGRLPFD----------SFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKKKM 170          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A835Z730_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z730_9STRA)

HSP 1 Score: 180 bits (457), Expect = 7.300e-54
Identity = 89/183 (48.63%), Postives = 126/183 (68.85%), Query Frame = 1
Query:  100 WETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQ-AICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDYWRENR 645
            W+ FK+ D   +G I+ + +F+ ++ E ++  G A+F LID +D + +EFGEFVQ A+CTF C   ++ML+F FMVYDKD+SG++EVE+LH FI    LH+S+VSNN+Q AM  L LDE GRLPFD          S +++NK +PQV+YP FRLQQ+T R ++G  WW  K+  L+Y R +R
Sbjct:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWK--LHNSDVSNNVQHAMQDLTLDELGRLPFD----------SFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHR 171          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A7S2D7S8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7S8_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.400e-46
Identity = 88/239 (36.82%), Postives = 141/239 (59.00%), Query Frame = 1
Query:    1 MGNSPPAPPPPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDYWRENREHVNEMERLKLVKKQERQRSAQIR 717
            MGNS P     + DR+ +  E+  L   +++ FW  F++ D  R G++  E FF  I++E RN FG+AIF+LID ED + LEFGEF+Q + T+CCF   ++L+FCF ++D++++G ++ +EL  F+   VLH+     N+++A   ++    G+  F      P F    Q +NK+FP VLYPAFR+QQ+   +I+G  WW++K   L   +E++   +     +    +ER R  QIR
Sbjct:    1 MGNSAPV----ADDRVQRAAEMVKLNVSDIKGFWNVFRKCDYDRIGIVATEDFFTKIVQEGRNMFGNAIFELIDAEDPDKLEFGEFLQGVVTYCCFDELEILQFCFFIFDREKNGYIDQDELKFFV--DVLHNEQQVANVRTAFQSIKFQTDGKFDF------PEF----QKLNKDFPTVLYPAFRMQQNMMLNIMGEDWWRQKKLMLTLDKEDQRSAHARMMRREFNNRERTRQKQIR 223          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A2R5GWK3_9STRA (Calmodulin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWK3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 8.730e-41
Identity = 85/239 (35.56%), Postives = 135/239 (56.49%), Query Frame = 1
Query:    1 MGNSPPAPPPPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDYWRENREHVNEMERLKLVKKQERQRSAQIR 717
            MGN  P P     DR+ K  ++  L  + +  FW  F+++D    G I  E F+  +I E+R  FGD++F+L+D +   TL+F EFVQ I T+  F   D+LKFCF V+DKD++G ++ +ELH  ++  +LH +N ++N ++A+ +   +  G++ F+            Q MN  FPQ+L+PAFR+QQ+   + LG  WW  K   L   R     + E  RLK +++Q R +  Q+R
Sbjct:    1 MGNKIPVP----DDRLQKTIDMLKLSKKEINKFWRIFQKYDRDHGGTIDVEEFYR-LIEEERTVFGDSLFELVDIDCSGTLDFSEFVQTIATYALFARVDILKFCFFVFDKDKNGYIDSDELHALVE--MLHGNNPTSNCRTALANFDTNSDGKIDFE----------EFQAMNVRFPQLLHPAFRMQQNMMINTLGEQWWNGKKLMLQEERNADNALEERLRLKELQRQHRNQQRQVR 222          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A8J2S6B5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6B5_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.780e-35
Identity = 70/205 (34.15%), Postives = 118/205 (57.56%), Query Frame = 1
Query:   28 PPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDYWREN 642
            P + DRI K  + F LK +++   W  FK+ D +R  +I    F++ I+   R  F D +F LI+  D E+++FGEFV A+ T+C F   ++LKFCF V+D+D+ G +  EE+  F+ A  +H + +S N++ A+D+L+  + G+  F+            + M+  +P VL+PAFRLQ +  + + G  +W+ K  EL   +E+
Sbjct:   14 PTADDRIAKAMQTFNLKEKDIRVLWHMFKKHDKERRSIIAISDFYDKIVFVPRTIFCDGLFDLIEAADSESIDFGEFVAAVTTYCFFEIPEVLKFCFFVFDRDKKGFITQEEMRLFVDA--MHGNEMSTNVEFALDNLKYRKDGKFDFE----------EFKGMHHLYPSVLFPAFRLQNAMMQAMGGEQFWESKKLELSMQKED 206          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A7S1UH45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH45_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.460e-35
Identity = 77/218 (35.32%), Postives = 124/218 (56.88%), Query Frame = 1
Query:    1 MGNSPPAPPPPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITREAFFEGII--REDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDYWRENRE 648
            MG     PP    +RILK  +   + +  +   W+ F+ +D    G I++  FF  I   RE   +FG+AI +L D +DE TL+FG+F Q   TF  F T +ML+FCF V+DKD++G ++ +EL+ F+  + ++ + V +NI S +  L  DE GRL +      P F A    M++ FP VLYP F+ Q + + +++G  WW +++  L   R+++E
Sbjct:    1 MGGGHSHPPIDDDERILKVVDTLEMTSNEIGMLWDAFRAYDHNAVGSISKIDFFCNICDQREWETDFGNAILELCDVKDEGTLDFGQFTQICGTFGAFQTKEMLQFCFFVFDKDKNGHMDEDELNAFV--ADIYGNAVPSNILSVIKGLNFDEDGRLYY------PQFAA----MHRQFPAVLYPVFQFQTNLRTNVMGAKWWNQRLARLRMDRDDKE 206          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A8K1C2H3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2H3_PYTOL)

HSP 1 Score: 133 bits (335), Expect = 6.930e-34
Identity = 70/201 (34.83%), Postives = 119/201 (59.20%), Query Frame = 1
Query:   28 PPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDY 630
            P   +R+L       LK++++++ +  F + D  + G I R  F++ I  +D +EFGDAIF LID ++   L+F E+V+A+  FC     DMLKFCF V+D D++G +E  EL H ++  +LH+   ++N++ A      ++ G++ F             Q++N  FP +LYPAFR+QQ+ + + +G +WW++KI EL +
Sbjct:   10 PVPDERMLHTIVKLKLKDDDLKSLYAKFLKCDKDKGGTIDRAEFYKSIDEKD-SEFGDAIFALIDEDNSGQLDFSEYVEALGKFCVLSKEDMLKFCFNVFDADKNGTIEGPELTHLME--MLHADGQTSNMKQAFKSFDFNDDGKIDFQ----------EFQMLNAQFPSLLYPAFRIQQNMRIYTMGVSWWRKKIEELHH 197          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A024TD15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TD15_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.040e-32
Identity = 74/221 (33.48%), Postives = 118/221 (53.39%), Query Frame = 1
Query:   28 PPSGDRILKCKELFMLKNENVEAFWETF-------------KQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKITELDYWRENREH 651
            P   +R+LK  E   L   ++   ++ F             +  D    G I R  FF    RE+R   GDA+F LID ++   L+F E+V+A+  FC   T ++LKFCF V+D+D++G +E  EL   ++  +LH+ N ++N+ +AMD    +  G++ F             QI+N+ FP +LYP +RLQQS + H +G AWW ++ T L   ++ RE+
Sbjct:    8 PAPDERMLKTIEKLQLNESDLRTLYKRFSNSSPRFQRGLLMRSLDHSNSGSINRTEFFRSF-REERTAVGDAVFALIDIDNSGQLDFSEYVEALGAFCLLNTDEVLKFCFFVFDQDKNGTIEGMELDALLE--MLHADNATSNMAAAMDKFDFNGDGKVDF----------REFQILNQQFPTLLYPVYRLQQSMKVHSMGEAWWNKRATLLSQLKDLREN 215          
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Match: A0A7S2C3E2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3E2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.370e-32
Identity = 82/240 (34.17%), Postives = 128/240 (53.33%), Query Frame = 1
Query:    1 MGNSPPAPPPPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITREAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSDMLKFCFMVYDKDRSGLLEVEELHHFIKASVLH----SSNVSNNIQSAMDHLQLDEYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAWWKRKIT----ELDYWRENREHVNEMERLKLVKKQER 696
            MG +   P P S  R LK  EL  +  + +  FW  F+  D K  G +    F++    E R+ FGDAIF+LID     +L+FGEFV A+ T+C F   +ML+FCF ++DKD++G +E EEL   +  ++L+    +  +  N + A+D L  ++ G++ F             +  N++FP + YPAFR+Q +    I G+AWW++K      E D  R   E+    E+ +L K Q+R
Sbjct:    1 MGAANSVPTPDS--RTLKAMELGHINMKELGIFWSAFRSIDKKLTGSVDISDFYK-FFEEKRSIFGDAIFELIDCNQSGSLDFGEFVHAVVTYCLFEQDEMLRFCFYIFDKDKNGYIEQEELRWMV--NILYGLGPTDKLKGNTKVAVDRLDFNDDGKVDFK----------EFKEFNRSFPALFYPAFRIQVNMINLIAGDAWWEKKKRWLQDEKDRKRAREEYSKRKEKARLRKMQQR 225          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig265.7232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7N0_9PHAE1.000e-12473.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMG3_ECTSI2.170e-9978.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z730_9STRA7.300e-5448.63EF-hand domain-containing protein (Fragment) n=1 T... [more]
A0A7S2D7S8_9STRA1.400e-4636.82Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2R5GWK3_9STRA8.730e-4135.56Calmodulin-like protein n=1 Tax=Hondaea fermentalg... [more]
A0A8J2S6B5_9STRA1.780e-3534.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1UH45_9STRA5.460e-3535.32Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8K1C2H3_PYTOL6.930e-3434.83Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TD15_9STRA1.040e-3233.48Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S2C3E2_9STRA1.370e-3234.17Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig265contigH-paniculata_contig265:17370..21371 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.6
Seed ortholog evalue1.1e-77
Seed eggNOG ortholog2880.D8LMG3
KEGG rclassRC00002,RC00017
KEGG koko:K04718,ko:K06268
KEGG ReactionR01926,R02976
KEGG Pathwayko00600,ko01100,ko04010,ko04020,ko04022,ko04071,ko04072,ko04114,ko04218,ko04310,ko04360,ko04370,ko04371,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04666,ko04720,ko04724,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map00600,map01100,map04010,map04020,map04022,map04071,map04072,map04114,map04218,map04310,map04360,map04370,map04371,map04380,map04650,map04658,map04659,map04660,map04662,map04666,map04720,map04724,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167
KEGG ModuleM00100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0034@2759
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-05_002650.1
EC2.7.1.91
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009
Exons7
Model size720
Cds size720
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929793.8189428-CDS-H-paniculata_contig265:17369..174771622929793.8189428-CDS-H-paniculata_contig265:17369..17477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 17370..17477 -
1691481013.5017533-CDS-H-paniculata_contig265:17369..174771691481013.5017533-CDS-H-paniculata_contig265:17369..17477Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 17370..17477 -
1622929793.8356545-CDS-H-paniculata_contig265:17709..178461622929793.8356545-CDS-H-paniculata_contig265:17709..17846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 17710..17846 -
1691481013.5143962-CDS-H-paniculata_contig265:17709..178461691481013.5143962-CDS-H-paniculata_contig265:17709..17846Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 17710..17846 -
1622929793.8571508-CDS-H-paniculata_contig265:18232..183201622929793.8571508-CDS-H-paniculata_contig265:18232..18320Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 18233..18320 -
1691481013.530649-CDS-H-paniculata_contig265:18232..183201691481013.530649-CDS-H-paniculata_contig265:18232..18320Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 18233..18320 -
1622929793.8749952-CDS-H-paniculata_contig265:18682..188181622929793.8749952-CDS-H-paniculata_contig265:18682..18818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 18683..18818 -
1691481013.546426-CDS-H-paniculata_contig265:18682..188181691481013.546426-CDS-H-paniculata_contig265:18682..18818Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 18683..18818 -
1622929793.892219-CDS-H-paniculata_contig265:18967..190901622929793.892219-CDS-H-paniculata_contig265:18967..19090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 18968..19090 -
1691481013.565952-CDS-H-paniculata_contig265:18967..190901691481013.565952-CDS-H-paniculata_contig265:18967..19090Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 18968..19090 -
1622929793.9100888-CDS-H-paniculata_contig265:20872..209271622929793.9100888-CDS-H-paniculata_contig265:20872..20927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 20873..20927 -
1691481013.579099-CDS-H-paniculata_contig265:20872..209271691481013.579099-CDS-H-paniculata_contig265:20872..20927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 20873..20927 -
1622929793.9233813-CDS-H-paniculata_contig265:21298..213711622929793.9233813-CDS-H-paniculata_contig265:21298..21371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 21299..21371 -
1691481013.5912821-CDS-H-paniculata_contig265:21298..213711691481013.5912821-CDS-H-paniculata_contig265:21298..21371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig265 21299..21371 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig265.7232.1prot_H-paniculata_contig265.7232.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig265 17370..21371 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig265.7232.1

>prot_H-paniculata_contig265.7232.1 ID=prot_H-paniculata_contig265.7232.1|Name=mRNA_H-paniculata_contig265.7232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=240bp
MGNSPPAPPPPSGDRILKCKELFMLKNENVEAFWETFKQFDLKREGLITR
EAFFEGIIREDRNEFGDAIFQLIDPEDEETLEFGEFVQAICTFCCFCTSD
MLKFCFMVYDKDRSGLLEVEELHHFIKASVLHSSNVSNNIQSAMDHLQLD
EYGRLPFDTNPRTPSFVASRQIMNKNFPQVLYPAFRLQQSTQRHILGNAW
WKRKITELDYWRENREHVNEMERLKLVKKQERQRSAQIRK
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mRNA from alignment at H-paniculata_contig265:17370..21371-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig265.7232.1 ID=mRNA_H-paniculata_contig265.7232.1|Name=mRNA_H-paniculata_contig265.7232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4002bp|location=Sequence derived from alignment at H-paniculata_contig265:17370..21371- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTAACTCTCCCCCGGCCCCTCCGCCTCCGTCGGGAGACCGAATTTT AAAGTGCAAAGAGCTGTTCATGTGTGAGTAAAAGGTCAGGCTGTGTATTG CTGATTCTACACTGTATATAGAGAAACTCGTGTAAATGCCATGTGGGACA GGCTGGGCCGTATTTCGGCCTCTCCAAACCAATCGAAGACCTCATAATAC CATGTCCCGCCCGTTTCAAGGTGATGATCGCATGCTTTGTTTGTAGTGAC AGTTTTGCCTAAAGATGCATGTATGCTCATCGAGATTACTAACATGAGTA CGACGGTTTTTCTTGTGTTTCAATGTGCATGGACAGGATGTGCCGCCTGG TACGTCGTTCATTCCTCTCATCACCGTCGCGCGCCGTCAGTCAACCGAGA AATCGCTGAGCAACCCCCCGTTCCTCTTTGATAATGACACTCAGTGAAAA ACGAAAATGTGGAAGCTTTTTGGGAGACATTCAAGCAATTCGACCTCAAG TGAGTCTAACGATGAGAGTCTTACATGGTAATGTAACACGCTTTTTTTTT GGGAGCGTAACAGTGGCAAAGTTCGTAAGGGTTAGGGCTCGAAGCTACCC AAAATGAATACCTCACAAAGAAGGGTGCATTTGATTAGAGGGGGAGTGGA ACGGTGAATTGATGTCATGGAAACTGGCAGGGGGGGGTGGCTGGGAGAGT GTCGATACCCATTAAACATAAAAGTAGTCGTCGCAAGAGGGAGTCGGGAG GAGGGTGCGACTGCCACTGAGTGCGATCAGAAACAGGTGTAGTGTTTGCT AAAGTGGCGAGCACTGGCGAGGAAGAACAGGAAAATGTCATTATTGCACA GCAAAAAACCTGCCCTGCGGTCATGGAACTTGAAAAAAAACGGAAGGTAG ATCGAAAAAATCCAAATGAACAAAATCATGTCTTGAAGGGGGTAGGGAGG GGGAGTAGTAGGGACGTTGGATGTTCGATATGACTGTATAGCCATACTCC ACTCATGAGGGGTGAGCCCCGATATGTTGTGGGTTCAATTCCTTTTACTT GTACTTTTCATCTCGAAATATTTCCGGGGAAAATGTCAATACGGGGCAAA GCAGAATGCTTGCGGAAGGGAGAAAAATACTCTTAGAGTATACCGCCATT AATCTCATCGTTGACGGCGAGTGGGACTGCTGCCCTCACCTCGCGATAAT ATAAGGCAAGAATCGAGGTACACAGTCCCAGCTTGGGACGGGAGGTTCCA ATAGGAGGACTGATCGGCGACAACAAAAGAGAAGAAAAAAGTAACACAGT AGGCCGAGATACCGTCACCGAGATAACACAGGCCACTGTGTCTCAAGATT ACAACTCCGTTATTGAAACCAATGATAATAGCCGATATTGATTGGGCGTC TCGCTATCAAGCAACCTCATCGCTATCAAGCAATCTCACGAGAGCTGGCT TCATGCGGCTGTACAATAAATTTCGGCAAAAGTCCACAGTACGAGAAGTT GCTGGACCTGATGAAAAAAGGCTATGGGAACTCGAAAAAATGGAACAAAC TGAAAAATATATTTTCAAAATGGTGTGGGACGGTGACCGAGGTTCCACGG ATTGAATGCGCTCCATGAGAAGGAACCCTTCCCCTCGTTGACATAATATA TTTATTGTTTATTAGACGTTAGCCGAATGGTGTTATTTTATTTCCTTTAA ATCCACAATAATTATTTGGCTAGGGAGAAAACACGCAGCAAGTATGCTTT ACGAGTTGTCAGATAAATTGTAGCCTGCAGATGAGGCCGGTTTCATATAT CGATGCGTTATCAGTACAAGGAAGCCTGCCACAACGCTCCCATTGAACTT GAAGGAAGGTAGGCCGCCAAGATTCTCGCGCGACATGAGTGCTGGGTTGG AATCTATGTACATAGGAATGGATGGGTGTAAACTGAGTGTGGTATACTCT TCTCGGATCGTGGAGCGCTCTTTCATCATGCTGGGCGTGCATAAGGTCTA GTGTCCCTCGTCTTGCGCCAGGCTTCCCGGGTCGTCGGATTATTTGCGGT ACAGTCGCTGAAGAACTCGACCGCAGTTGTCGGTAGATTACGCATCGAAA GTCACTGCAGTTTGTCAAGTAGCTCTTGAATTCGTGAGTGCAAATAGCTT TCGAGCTGGACGAGGCAGTCACAAGCAGAACTAACTCTCCTTTTCGACGT TTCACAATGCGAGAAACTCGAGAAAACCTTTGACATACCTCTAACATCTC CTACAAATTTCGGGGACCGAGGGGACGAAAGGCGGGAAGGGCTTATTACT CGAGAGGCTTTCTTCGAGGGCATCATCAGAGAGGACAGAAACGAGTTTGG AGATGCCATATTTCAGCTCATTGATCCAGAGGATGAAGAAACGCTCGAGT TCGGGTATGTACGAAATTTTGAGCTAGACTCCCTCAGATCGATTTCGTTG GTGTGGACGACAAGACCCAAAGACTCCATCCGAAGCAACTTCATTCGGCA ACCTCTCACAGTGGTGTTGTTTTGCTGTGTTTGCTTTGGCCGGCATTTGT CAGCGAATTCGTCCAGGCAATTTGCACTTTTTGCTGTTTCTGCACCTCGG ACATGCTCAAATTTTGTTTTATGGTGTACGACAAGGACCGTTCTGGTCTT TTGGAGGTCGAAGAACTTCATCACTTCATCAAGGCAAGTGTTTACAATGC CGTTCTTGCGTGCTTTTCTTACTTTTATATCCATATGTTGAAGTCGCTTG CTTTGTCTGACTGACGAAGTTGTGACAAAAATGGACTCATGGGCATTCCA TGCTGAAGAACAAGTGAACGGGCTTGAGCTCGACTGAGCAAAACATGCTC GTTGCAGATTTTGATTGCCGCCGTTTGAGTCTTGACATGTGGCACCAACC TGCTGGGATAGCACCGGCGAGGGAGGAGAGCATTCTACACGCGCGCTCGA AGCGCGGAACCAAACAACAAATCGATATTTTTCATGTTCGGGTACCAACT GACACCTTAACCATGCACTCGTACTACTGATTGCCAATCCCACAACAACA GGTCCTTCACAGCTCGAACGTTTCGAACAACATACAGAGTGCCATGGATC ACCTGCAGCTGGACGAGTACGGAAGGCTTCCGTTTGACAGTTTTAAGGCA CGCCGTCCCACTTCGAGCACCTTCACATCAATATCAGAATGCCTTCATCG CGCATTGCTGCACTTTCCTAAATAGTGCACAGTTCGTTTCTCGTTGGACT TTACGCCAGAACCAAAGGTATCTACTTGTCCAGCAATTCGAAGATACTGA GTCCGGAGCACTCGTGGATTTTACCTGGATATCTCAGCACAAACAATACG ATACAAGTACCTTCTACTCGATAAACGGGCATGGAGATCCTTTGCGCTGT TTATTCCTCGAAGTGAAGGAATACATGTGGTCAGAGTGCAGTACGCCACT ATCTCCAGATTTGACCACAACAGCGATCAAGTGCAGAAAGAGGGGCACGA TTGAACTGTTGCCCCTATCAAGAAGCTAACCCTCGAACCCCGTCATTCGT TGCTTCTCGACAGATCATGAACAAGAATTTTCCGCAGGTTCTTTATCCTG CGTTTCGATTGCAGCAGTCTACACAACGTCATATATTGGGTAACGCCTGG TGGAAACGGAAGGTGAGACATTACACCACAACATGCTTTATATTACACTC CTCAAAAGAATTGCCAGCACCTGAGGCAGACTATATAATCATTTTCAGCC AATGCCAGCATTCGACAGAAATTTCCATGCATTAGATACGTGTCCAATCG GGATCCAAATCCACGTTAGAGGAATCGTTGGATATCAGTGCAAAGATAGA GGAATGTGATGTTTACAATTTGAACACCTGATTTTTCAACACAGATTACC GAGCTGGATTATTGGCGAGAAAACAGAGAGCACGTGAATGAAATGGAGCG ATTGAAGCTGGTTAAAAAGCAGGAGAGACAGCGAAGTGCACAAATTCGAA AG
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Coding sequence (CDS) from alignment at H-paniculata_contig265:17370..21371-

>mRNA_H-paniculata_contig265.7232.1 ID=mRNA_H-paniculata_contig265.7232.1|Name=mRNA_H-paniculata_contig265.7232.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1440bp|location=Sequence derived from alignment at H-paniculata_contig265:17370..21371- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTAACTCTCCCCCGGCCCCTCCGCCTCCGTCGGGAGACCGAATTTT
AAAGTGCAAAGAGCTGTTCATGTATGGGTAACTCTCCCCCGGCCCCTCCG
CCTCCGTCGGGAGACCGAATTTTAAAGTGCAAAGAGCTGTTCATGTTGAA
AAACGAAAATGTGGAAGCTTTTTGGGAGACATTCAAGCAATTCGACCTCA
ATGAAAAACGAAAATGTGGAAGCTTTTTGGGAGACATTCAAGCAATTCGA
CCTCAAGCGGGAAGGGCTTATTACTCGAGAGGCTTTCTTCGAGGGCATCA
TCAGAGAGGACAGAAACGAGTTTGGAGATGCCATATTTCAGCTCATTGAT
CCAGAGGATGAAGAAACGCTCGAGTTCGGGCGGGAAGGGCTTATTACTCG
AGAGGCTTTCTTCGAGGGCATCATCAGAGAGGACAGAAACGAGTTTGGAG
ATGCCATATTTCAGCTCATTGATCCAGAGGATGAAGAAACGCTCGAGTTC
GGCGAATTCGTCCAGGCAATTTGCACTTTTTGCTGTTTCTGCACCTCGGA
CATGCTCAAATTTTGTTTTATGGTGTACGACAAGGACCGTTCTGGTCTTT
TGGAGGTCGAAGAACTTCATCACTTCATCAAGGCAAGTCGAATTCGTCCA
GGCAATTTGCACTTTTTGCTGTTTCTGCACCTCGGACATGCTCAAATTTT
GTTTTATGGTGTACGACAAGGACCGTTCTGGTCTTTTGGAGGTCGAAGAA
CTTCATCACTTCATCAAGGCAAGTGTCCTTCACAGCTCGAACGTTTCGAA
CAACATACAGAGTGCCATGGATCACCTGCAGCTGGACGAGTACGGAAGGC
TTCCGTTTGACAGTCCTTCACAGCTCGAACGTTTCGAACAACATACAGAG
TGCCATGGATCACCTGCAGCTGGACGAGTACGGAAGGCTTCCGTTTGACA
CTAACCCTCGAACCCCGTCATTCGTTGCTTCTCGACAGATCATGAACAAG
AATTTTCCGCAGGTTCTTTATCCTGCGTTTCGATTGCAGCAGTCTACACA
ACGTCATATATTGGGTAACGCCTGGTGGAAACGGAAGCTAACCCTCGAAC
CCCGTCATTCGTTGCTTCTCGACAGATCATGAACAAGAATTTTCCGCAGG
TTCTTTATCCTGCGTTTCGATTGCAGCAGTCTACACAACGTCATATATTG
GGTAACGCCTGGTGGAAACGGAAGATTACCGAGCTGGATTATTGGCGAGA
AAACAGAGAGCACGTGAATGAAATGGAGCGATTGAAGCTGGTTAAAAAGC
AGGAGAGACAGCGAAGTGCACAAATTCGAAAGATTACCGAGCTGGATTAT
TGGCGAGAAAACAGAGAGCACGTGAATGAAATGGAGCGATTGAAGCTGGT
TAAAAAGCAGGAGAGACAGCGAAGTGCACAAATTCGAAAG
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