mRNA_H-paniculata_contig2649.7230.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2649.7230.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI) HSP 1 Score: 337 bits (863), Expect = 5.360e-110 Identity = 171/241 (70.95%), Postives = 201/241 (83.40%), Query Frame = 1
Query: 64 EEAAAA--SVGAPGPVEKLQVLLTKAKEKGMSAERLFEHFAPNGESSITPAMFEAALRKLGQSAFDIDHLELEHLITTFDADGNGTVELEEFMTFCLSIPSLPWRAEKVRRLLTNIESTDHLDVAARNIARRRSSLKAIPIG----QGTMFFWRSKENIDVAFHYNRNEELLTISTRSHERGHNYPAIFIDACKIPISRADAIARANSIGQFEAYTEEERHEAIDKALTQLRVEYLQHRLK 768
+EAAAA + G PVEKLQVLLTKAKE+GMSAERLFEHFAP GE+S+TP MFE+ALRKLGQ AFD+D +ELEHL+T FD DGNGTVEL+EFMTFCLSIPSLPWRAEK RRL N ES D L+VAAR IARRRSSL+A+PIG QG+ FFWRSKE IDVA H N +E L+TISTR ERG+NYPAIF+D KIP+ + +A+ARAN++GQFE+ +++ER EA DKA+T LRVEYLQHR +
Sbjct: 96 DEAAAAVEAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGGEASVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARRL-NNAESKDELNVAARKIARRRSSLRAVPIGELVHQGSRFFWRSKETIDVALHLNADEGLMTISTRCPERGYNYPAIFVDVSKIPVHKTEAVARANAVGQFESMSKDERREATDKAMTALRVEYLQHRWR 335
BLAST of mRNA_H-paniculata_contig2649.7230.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA) HSP 1 Score: 220 bits (561), Expect = 6.810e-64 Identity = 148/395 (37.47%), Postives = 207/395 (52.41%), Query Frame = 1
Query: 100 PVEKLQVLLTKAKEKGMSAERLFEHFAPNGESSITPAMFEAALRKLGQSAFDIDHLELEHLITTFDADGNGTVELEEFMTFCLSIPSLPWRAEKVRRLLTNIESTDHLDVAARNIARRRSSLKAIPIGQGT----MFFWRSKENIDVAFHYNRNEELLTISTRSHERGHNYPAIFIDACKIPISRADA--------------------------IARANSIGQFEAYTEEERHEAIDKALTQLRVEYLQHRLKVPDEVNEPDEDSSRPSSPDDTLRSPSDLDSDNESTLSTPTKDASTQGQQLPGSMTPTDLGRAVDGMTPQERAKEKAAHRPFLANLSTDTWDTLQCQRNIVLQTPHRFESSARRRSSLADFSKASLEFDKLAKETERLSSMAE 1194
P+EKLQ LLT AKE+GMSAERLFE FAP G +++T FE ALR+L F + EL+ L+ FDA+ NG +EL EFM FC++IPSL W+AE+ RR+ + ++ + L AARN RRRS+ KA+ +G+ MFFWRS++N+DV H N E ++ ISTRS +R +P IF++A +IPI+RA IA+ + E + +ER E + +L EYL +RLKVPD+ N+P S+ SP S +P + A AA PFL LSTD ++ C R +++ P+RF ++ RR S+ DF +ASLE +L ET L +AE
Sbjct: 30 PLEKLQALLTAAKERGMSAERLFEFFAPAGSATMTADDFERALRELSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARRM-SAVDGPEALTEAARNSERRRSTCKAVDLGEKIHDRKMFFWRSQQNLDVVLHENIGEGVVIISTRSFDRDLTFPPIFVEASRIPIARAQINKAVDDKELSVVDKRQAFPPQSHHAQIAKRQEGSRQEPISTQERAELYEATRKELISEYLLNRLKVPDDANKPPGLSAAAKSP--------------------------------KRSTSPKSVAAAA-----------MAAEAPFLQRLSTDGAGSVLCTRGLMVSKPYRFPTA--RRGSVDDFRRASLELQRLVGETSGLIDVAE 378
BLAST of mRNA_H-paniculata_contig2649.7230.1 vs. uniprot
Match: D8LCP2_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP2_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 1.260e-15 Identity = 65/251 (25.90%), Postives = 109/251 (43.43%), Query Frame = 1
Query: 100 PVEKLQVLLTKAKEKGMSAERLFEHFAPNGESSITPAMFEAALRKLGQSAFDIDHLELEHLITTFDADGNGTVELEEFMTFCLSIPSLPWRAEKVRRLLTNIESTDH---------LDVAARNIARRRSSLKAIP----------IGQGTMFFWRSKENIDVAFHYNRNEELLTISTRSHERGHNYPAIFIDACKIPISRADAIARANSI------GQFEAYTEEERHEAIDKALTQLRVEYLQHRLKVPD 777
PVE ++ ++ + KE G + +LF F + TFD DG+GT+EL EF+ +CL I ++ W+AE+VRR S H +D AA +A + + P I +G+ FWR+ E++ +A H N+ + + IST +P + +D+ I ++ DA+ + G+ + E+ R + DKA + +YL RLK+ D
Sbjct: 108 PVEAMRSIMVRGKEHGWTTSQLFGVF-----------------------------------LETFDTDGSGTIELSEFIRWCLDIDTMAWKAERVRRTTGGQTSGGHGKRGDGEIGIDEAAARMAGEVAQAQLPPEQPRFPLGTLIYEGSKLFWRTGESLRIAMHENKEKHCIAISTMLEGESEPFPVLKVDSRLIRVNGKDAVLERIAEMTEADKGEIQRLPEDARAKLFDKARASVLSDYLLARLKLID 323
BLAST of mRNA_H-paniculata_contig2649.7230.1 vs. uniprot
Match: F0XWQ4_AURAN (EF-hand domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWQ4_AURAN) HSP 1 Score: 85.5 bits (210), Expect = 1.630e-14 Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 1
Query: 124 LTKAKEKGMSAERLFEHFAPNG---ESSITPAMFEAALRKLGQSAFDIDHLELEHLITTFDADGNGTVELEEFMTFCLSIPSLPWRAEKVRR 390
++ AKEKG+ +++F++F G + ITP FEAA++KLG S I EL LI FD D NGTV +EEF+ +CL IP+L W+AEK+RR
Sbjct: 1 MSNAKEKGLRVDQIFKYFKSEGAGDDDDITPDDFEAAMKKLGWS---ISAGELAALIDHFDEDKNGTVSMEEFLHYCLHIPTLAWKAEKLRR 89
BLAST of mRNA_H-paniculata_contig2649.7230.1 vs. uniprot
Match: A0A7S2D074_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D074_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.640e-8 Identity = 59/236 (25.00%), Postives = 108/236 (45.76%), Query Frame = 1
Query: 100 PVEKLQVLLTKAKEKGMSAERLFEHFA-PNGESSITPAMFEAALRKL--GQSAFDIDHLELEHLITTFD-ADGNGT--VELEEFMTFCLSIPSLPWRAEKVR-----------RLLTNIESTDHLDVAARNIARRRSSLKAIP-IGQGTMFFWRSKENIDVAFHYNRNEELLTISTRSHERGHNYPAIFIDACKIPISRADAIARANSIGQFEAYTEEERHEAIDKALTQLRVEYL 753
PVEKL ++++KAKE G S E +F F NGE + FE L+KL GQ+A D D + FD D N + V+L+EF + L + ++ W+AE++R + + N + + ++ + + I + G FFWRS+ +++ F + ++ + N IF+ + +I + A S E+ + +++ ++ + + EYL
Sbjct: 94 PVEKLDLIMSKAKESGKSYEAIFNEFRHENGEINFED--FEIGLKKLIKGQTA-DPDDTATKEFRVMFDYLDDNQSNGVDLKEFQEYALKMKNVSWKAERIRQSNDFPGSLLNKAVVNPATFSNDEIKTKTCVVDKHHTDTITEVYHGPKFFWRSQTKLELVFTQYEITNCIVVTAFHEKLQVNLDPIFLKSDQI------MLVAARSEADHESVSTSKKNSKLESEDVERKAEYL 320 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2649.7230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2649.7230.1 >prot_H-paniculata_contig2649.7230.1 ID=prot_H-paniculata_contig2649.7230.1|Name=mRNA_H-paniculata_contig2649.7230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=408bp MGVANPGIRDAAAHVLLEEAAAASVGAPGPVEKLQVLLTKAKEKGMSAERback to top mRNA from alignment at H-paniculata_contig2649:12007..17952- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2649.7230.1 ID=mRNA_H-paniculata_contig2649.7230.1|Name=mRNA_H-paniculata_contig2649.7230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5946bp|location=Sequence derived from alignment at H-paniculata_contig2649:12007..17952- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2649:12007..17952- >mRNA_H-paniculata_contig2649.7230.1 ID=mRNA_H-paniculata_contig2649.7230.1|Name=mRNA_H-paniculata_contig2649.7230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2448bp|location=Sequence derived from alignment at H-paniculata_contig2649:12007..17952- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |