mRNA_H-paniculata_contig2647.7225.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig2647.7225.1
Unique Name	mRNA_H-paniculata_contig2647.7225.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: D8LDJ7_ECTSI (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ7_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 1.930e-186
Identity = 276/316 (87.34%), Postives = 291/316 (92.09%), Query Frame = 1

Query:  217 FGGGSGSMLVLNDPAAHLSG------NKATPVASLSAFASTNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKLA 1146
            FGGGSGSMLVLNDPAA LS         A PV +LSAFAS+ND+VVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTV+AN+VEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQ+VNGRES+VGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALK+NIVGCKAFISTPLEI G+ALANVFHEVKV LVS EAERICIDRMVKGQ+  FTTPEGLA V+SRMASLETSMQRL+ MLQQA+EYV TVV G+ PADPHMGRKLADTLAA+PRMRPE F RLFDDNLQDLLMVSYLSSLTRTQL IAEKLA
Sbjct:    4 FGGGSGSMLVLNDPAAQLSSVEGKAATSAAPVTNLSAFASSNDIVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVTANVVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQRVNGRESVVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKNNIVGCKAFISTPLEIDGSALANVFHEVKVSLVSAEAERICIDRMVKGQEEAFTTPEGLAEVDSRMASLETSMQRLVTMLQQAEEYVGTVVDGKLPADPHMGRKLADTLAAIPRMRPEAFNRLFDDNLQDLLMVSYLSSLTRTQLAIAEKLA 319

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: A0A835YQU3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU3_9STRA)

HSP 1 Score: 425 bits (1092), Expect = 2.210e-142
Identity = 215/312 (68.91%), Postives = 254/312 (81.41%), Query Frame = 1

Query:  211 MAFGGGSGSMLVLNDPAAHLSGNKATPVASLSAFASTNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKLA 1146
            M+F G  G+ L+LNDPA  LS     P  +L+ +ASTND+VVKVHP+VLFSVLDHYLRRPE Q RVIGTLLG V+AN+VE+TNSFAVPH EKNDEVAVGKDFNK MLAL   VNG+E IVGWYAT+FDG  +VD+SSLIH+F+T ECE PVH+VVDT+L  + +GC+A+IS+PLEI G ALANVFH+V+V+L S+EAERICIDRMVKGQ     TP+G+A+V+S   SLE+SM RLL ML+ A  +V  VV GE P D  +GRK+ADTLA VPRMRPE F ++FD NLQDLLMVSYLSSLTRTQL IAEKLA
Sbjct:    1 MSFSGADGA-LILNDPATQLSRTGDAPAPTLTGYASTNDIVVKVHPVVLFSVLDHYLRRPEGQVRVIGTLLGKVNANVVEVTNSFAVPHQEKNDEVAVGKDFNKQMLALSGLVNGQERIVGWYATTFDGAQVVDNSSLIHEFFTTECESPVHIVVDTSLASDTIGCRAYISSPLEIAGEALANVFHQVQVQLESSEAERICIDRMVKGQAGGVLTPDGIASVDSEAVSLESSMTRLLAMLEAASAFVDKVVAGEVPGDAQVGRKIADTLAVVPRMRPEAFAKMFDGNLQDLLMVSYLSSLTRTQLAIAEKLA 311

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: A0A7S2DND3_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND3_9STRA)

HSP 1 Score: 350 bits (898), Expect = 2.780e-113
Identity = 172/279 (61.65%), Postives = 215/279 (77.06%), Query Frame = 1

Query:  313 ASTNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKLAA 1149
            A  +  +VK+HP VLFS++DH++RRPE Q RVIGTLLG  +   VE+ N FAVPH EK DEVAVG+ FNK+M +L  +VN +E IVGWYATS DG+ IVD SSLIHDFY  EC  P+H+VVDTAL  N VG KA++STPL+I G   AN+FH+V+VE+ S++AERIC+DRM+KGQ APF T E L+A+   + SLETSMQRLL M++    +V  VV GE  AD   GR +ADTLA+VPR+RP+ F R+F+DNLQDLLMVSYLSSLT++QL IAE+L A
Sbjct:   25 AEGSSRLVKIHPSVLFSIIDHFIRRPEGQTRVIGTLLGYSTDTHVELVNCFAVPHSEKQDEVAVGQTFNKNMCSLHTRVNTKEKIVGWYATSMDGMCIVDSSSLIHDFYANECADPIHIVVDTALIANTVGVKAYVSTPLQIAGVEFANMFHQVQVEMSSSDAERICMDRMLKGQAAPFQTSEALSALPHELTSLETSMQRLLGMIELVSNHVDKVVSGEREADNETGRCIADTLASVPRIRPQVFDRIFNDNLQDLLMVSYLSSLTKSQLAIAERLNA 303

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: A0A7S2WB79_9STRA (Eukaryotic translation initiation factor 3 subunit F n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WB79_9STRA)

HSP 1 Score: 345 bits (886), Expect = 5.940e-111
Identity = 167/273 (61.17%), Postives = 212/273 (77.66%), Query Frame = 1

Query:  331 VVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSFDGVLIVDDSSLIHDFYTGECERPVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKLAA 1149
            +VKVHP VLFS+LDH++RR E Q RVIGTLLG V  + VE+TN FAVPH +K DEVAVG+ FNK+M  L Q+VN +E IVGWYATS +GV +VD SSLIH FY  EC  PVHLVVDTA++ + +G KA++STPL + G  LAN+FH++KVEL S+E ERICIDRM+KGQ +PFT+ E LA +   +  +  SM+RLL M++ A  YV  V+ GE  AD   GR++ADTLA+VPR+RPE F R+F+DN+QDLLMVSYL+SLT+TQL I+E+L A
Sbjct:   67 LVKVHPAVLFSILDHFIRRQEGQVRVIGTLLGYVEESCVEVTNCFAVPHSDKQDEVAVGQAFNKTMYDLHQRVNPKEQIVGWYATSMEGVSVVDSSSLIHGFYAEECADPVHLVVDTAMRGDTLGVKAYVSTPLTVAGIELANMFHQIKVELFSSEPERICIDRMIKGQKSPFTSSESLAEITEELHGIGVSMERLLGMIEVASSYVDKVIAGEVQADEETGRRIADTLASVPRIRPEVFDRVFNDNIQDLLMVSYLASLTKTQLTISERLNA 339

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: K0TIU7_THAOC (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIU7_THAOC)

HSP 1 Score: 296 bits (757), Expect = 5.610e-92
Identity = 158/313 (50.48%), Postives = 213/313 (68.05%), Query Frame = 1

Query:  226 GSGSMLVLNDPAAHLSGNKATPVASLSAFASTNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSF------DGVLIVDDSSLIHDFYTGECER-PVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKL 1143
            GS   L+L  PA  L+   A   +S S  A      V VHP+VL SVLDH+ RR E   RVIGTLLG  + + VEITNSFAVPH E+ DEVA+GKDFN+ ML+L  + N RE++VGWYAT+       +   I D SSLIH+FY GEC+  P+HLVVDTALK + +  +A+ STP+ I G  LAN+FHE+++ + S+EAERIC+DRM+   D+P    +G    +    +L  SM++LL ML+   EYV  VV G  PAD  +G  +++ L+++PR+RPE F ++F+D+LQDLLMV+YLS++T+TQL IAEKL
Sbjct:   10 GSSPALILTKPARSLAAVAAASASSESVPACQ----VNVHPLVLLSVLDHHTRRQEGAGRVIGTLLGKRNGDTVEITNSFAVPHAERGDEVAIGKDFNRQMLSLHLRANPRETVVGWYATALPDEATGESHCIADTSSLIHEFYAGECDDDPIHLVVDTALKADAIALRAYKSTPVVIKGEPLANMFHEIRLSVRSSEAERICVDRMIGATDSP----DGADPTQDEGEALRVSMEKLLAMLETCSEYVDKVVDGSVPADDALGMDISECLSSIPRIRPEAFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKL 314

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: B8LD20_THAPS (Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD20_THAPS)

HSP 1 Score: 287 bits (735), Expect = 3.040e-89
Identity = 147/282 (52.13%), Postives = 200/282 (70.92%), Query Frame = 1

Query:  334 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSF---------DGVLIVDDSSLIHDFYTGECER-PVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKLAA 1149
            V VHP+VL SVLDH+ RR E   RVIGTLLG    + VEITN FAVPH E+ DEVA+GKDFN+ MLAL  + N RE+++GWYAT+          +   I D SSLIH+FY  ECE  P+HLVVDT+L+ + +  +A+ STP+ + G  LAN+FHE+++ + S+E+ERIC+DRM++      ++ EG  A +   A+L+ SM+RLL ML+   EYV  VV G   AD  +GR +++TL +VPR+RPE F ++F+D+LQDLLMV+YLS++T+TQL IAEKL A
Sbjct:    1 VLVHPIVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRETVIGWYATALPDENDPVNGESKCIADTSSLIHEFYATECEDDPIHLVVDTSLETDAMALRAYKSTPVSVKGEPLANLFHEIRLAVKSSESERICVDRMIRSA----SSAEGAPASQDESAALQISMERLLAMLETCSEYVDKVVDGTISADDQVGRDISETLNSVPRIRPEVFDKMFNDSLQDLLMVTYLSNITKTQLTIAEKLNA 278

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: A0A7S1ZLF8_9STRA (Eukaryotic translation initiation factor 3 subunit F n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZLF8_9STRA)

HSP 1 Score: 288 bits (738), Expect = 8.690e-89
Identity = 159/335 (47.46%), Postives = 212/335 (63.28%), Query Frame = 1

Query:  250 NDPAAHLSGNKATPVASLSAFASTNDLVVKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSF------------DGV--------------LIVDDSSLIHDFYTGECER-PVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDA--------PFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKLAA 1149
            + PA  L G  ++P   +     TN   V VHP+VL SVLDH+ RR E   RVIGTLLG    + VEITN FAVPH E+ DEVA+GKDFN+ MLAL  + N RES+VGWYAT+             DG                I D SSLIH+FY GEC+  P+HLV+DT+L D+ +  +A+ STP+++ G  LAN+FHE+++ +  +  E+IC+D+M+K  D             PE  A+ ES +A+L+ SM++L  ML+ A  YV +VV G  P +  +GR++AD L+ +PR+RPE F R+F+D LQDLLMV+YLS LTRTQLEIAEKL A
Sbjct:   10 SSPALLLQGAASSPADVVDGAGVTNS--VTVHPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDKVEITNCFAVPHAERGDEVAIGKDFNRQMLALHLRANKRESVVGWYATALPEEDEGNEEETKDGGKGKKKMTSSPKSYRCIADTSSLIHEFYAGECDDDPIHLVIDTSLIDDSLALRAYRSTPVQVKGEPLANMFHEIRLGMTCSGTEKICVDKMIKSDDLLKRRNKSQEEEVPEDAASDESPVAALQISMEKLYSMLETATSYVDSVVDGSVPPNDVVGRQIADALSTIPRIRPEVFDRMFNDELQDLLMVTYLSKLTRTQLEIAEKLNA 342

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: A0A7S3V657_9STRA (Eukaryotic translation initiation factor 3 subunit F n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V657_9STRA)

HSP 1 Score: 281 bits (719), Expect = 3.690e-86
Identity = 147/295 (49.83%), Postives = 199/295 (67.46%), Query Frame = 1

Query:  334 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSF---------------DGVLIVDDSSLIHDFYTGECE-----RPVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQDAPFTTPEGLAAVESRMA-----SLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKL 1143
            V VHP+VL S+LDH+ RR ++  RVIGTLLG    N VE+TN FAVPH E+ DEVA+GKDFN+ MLAL  + N  E++VGWYAT+F               +   + D SSLIH+FY GECE      PVHLVVDT+L ++ +G K FIS+ + + G  LAN+FHEV++ L S+E+ERI +D M++         EG    +  +      SL+ SM++LL+ML+ A +YV  VV G+  AD  +G ++ADTL+ VPR+RPE F ++F+D+LQDLLMVSYLS++TRTQL I+EKL
Sbjct:   29 VVVHPLVLLSILDHHTRRQDSAGRVIGTLLGRRDGNKVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRSETVVGWYATAFPSNGNDDNDDSNATTETRCLADTSSLIHEFYAGECEDTVMDSPVHLVVDTSLVEDTIGLKGFISSAVTLNGEPLANIFHEVRLLLKSSESERIVLDEMIRSLGGGAKKLEGEEKKDESVGEPSGGSLQVSMEKLLEMLETASDYVGQVVDGKLEADDAVGNQIADTLSTVPRIRPEVFDKMFNDSLQDLLMVSYLSNITRTQLTISEKL 323

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: A0A7R9W361_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W361_9STRA)

HSP 1 Score: 278 bits (710), Expect = 6.820e-85
Identity = 150/299 (50.17%), Postives = 196/299 (65.55%), Query Frame = 1

Query:  334 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSF----DGV-----------------LIVDDSSLIHDFYTGECER-PVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVKGQ--------DAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEK 1140
            V VHP+VL SVLDH+ RR E   RVIGTLLG    + VE+TN FAVPH E+ DEVA+GKDFN+ MLAL  + N +E++VGWYAT+     DG                   I D SSLIH+FY GEC+  PVHLVVDT+L+ + V  +A+ STP+++ G  LAN+FHE+ + +  +E+ERI +D+MVK Q        +            E   A+L  SM+RLL ML+ A  YV  VV G+ PAD  +GRK+ D L+A+PR+RPE F R+F+D+LQDLLMV+YLS++TRTQL IAEK
Sbjct:   29 VVVHPLVLLSVLDHHTRRQEGAGRVIGTLLGRRDGDRVEVTNCFAVPHAERGDEVAIGKDFNRQMLALHLRANRKETVVGWYATALPVDSDGGEGEEGADSSGSGGGEYRCIADTSSLIHEFYAGECDDDPVHLVVDTSLRTDAVSLRAYRSTPVQVRGEPLANLFHEIGLAVRCSESERIAVDQMVKAQNREKADGGEXXXXXXXXXXXXEDEAAALRVSMERLLSMLETASAYVDGVVEGKTPADDKVGRKIEDALSAIPRIRPEVFDRMFNDSLQDLLMVTYLSNVTRTQLTIAEK 327

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BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Match: A0A8J9TEL0_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TEL0_PHATR)

HSP 1 Score: 270 bits (691), Expect = 9.880e-83
Identity = 143/281 (50.89%), Postives = 197/281 (70.11%), Query Frame = 1

Query:  334 VKVHPMVLFSVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGKDFNKSMLALQQKVNGRESIVGWYATSFDGV------LIVDDSSLIHDFYTGECER--PVHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERICIDRMVK-GQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATVVGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSLTRTQLEIAEKLAA 1149
            V VHP+VL  VLDH+ RR E   RVIGTLLG  + N+VE+TN F+VPH E+ +EVA+GKDFNK+ML L  + N +E++VGWYA++ +G       LI D SSLIHDFY GE +   PVHLVVDT LK++ +  +AF S+ + + G A+ N+FHE+K+ L S E E IC+++M++ G +   +  E  +A      +L+ SM++L  +L++   YV +VV G+ P D   GR++ADTLA V R+RPE F RLF D+LQDLLMVSYLS++TRTQ+ IA+KL A
Sbjct:    1 VIVHPVVLLHVLDHHTRRQEESGRVIGTLLGRQNGNVVEVTNCFSVPHAERGEEVAIGKDFNKTMLGLHLRANRKETVVGWYASAANGDSESNGDLITDTSSLIHDFYAGEADEGDPVHLVVDTRLKEDSLSMRAFKSSQIVVQGEAMGNLFHELKLSLKSNEPEAICLNQMIRTGGELVASKDESNSA-----KALQISMEKLYALLEKTLAYVDSVVDGKTPPDAEAGRQIADTLATVARVRPEVFDRLFHDSLQDLLMVSYLSNITRTQMTIADKLNA 276

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2647.7225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDJ7_ECTSI	1.930e-186	87.34	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A835YQU3_9STRA	2.210e-142	68.91	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7S2DND3_9STRA	2.780e-113	61.65	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7S2WB79_9STRA	5.940e-111	61.17	Eukaryotic translation initiation factor 3 subunit...	[more]
K0TIU7_THAOC	5.610e-92	50.48	Eukaryotic translation initiation factor 3 subunit...	[more]
B8LD20_THAPS	3.040e-89	52.13	Predicted protein (Fragment) n=1 Tax=Thalassiosira...	[more]
A0A7S1ZLF8_9STRA	8.690e-89	47.46	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7S3V657_9STRA	3.690e-86	49.83	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A7R9W361_9STRA	6.820e-85	50.17	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A8J9TEL0_PHATR	9.880e-83	50.89	Hypothetical protein n=2 Tax=Phaeodactylum tricorn...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2647	contig	H-paniculata_contig2647:10189..19705 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	538.9
Seed ortholog evalue	1.6e-150
Seed eggNOG ortholog	2880.D8LDJ7
Preferred name	EIF3F
KEGG ko	ko:K03249
KEGG Pathway	ko03013,map03013
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000122,GO:0001732,GO:0002181,GO:0002183,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0004843,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005852,GO:0006355,GO:0006357,GO:0006412,GO:0006413,GO:0006464,GO:0006508,GO:0006518,GO:0006807,GO:0007275,GO:0008135,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008593,GO:0009058,GO:0009059,GO:0009743,GO:0009744,GO:0009790,GO:0009791,GO:0009793,GO:0009846,GO:0009856,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010154,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0010646,GO:0010647,GO:0016020,GO:0016032,GO:0016043,GO:0016282,GO:0016579,GO:0016787,GO:0019080,GO:0019081,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023056,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031369,GO:0032501,GO:0032502,GO:0032991,GO:0034285,GO:0034622,GO:0034641,GO:0034645,GO:0036211,GO:0036459,GO:0042221,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044706,GO:0045747,GO:0045892,GO:0045934,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051704,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0075522,GO:0080090,GO:0097159,GO:0101005,GO:0140096,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.	translation initiation factor activity
EggNOG OGs	COG1310@1,KOG2975@2759
Ec32 ortholog description	translation initiation factor eIF3 f subunit
Ec32 ortholog	Ec-15_000300.1
COG Functional cat.	J
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03012,ko04147
Exons	9
Model size	1875
Cds size	942
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929792.1383014-UTR-H-paniculata_contig2647:10188..10370	1622929792.1383014-UTR-H-paniculata_contig2647:10188..10370	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2647 10189..10370 +
1691481012.7579343-UTR-H-paniculata_contig2647:10188..10370	1691481012.7579343-UTR-H-paniculata_contig2647:10188..10370	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2647 10189..10370 +
1622929792.1558201-UTR-H-paniculata_contig2647:11104..11132	1622929792.1558201-UTR-H-paniculata_contig2647:11104..11132	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2647 11105..11132 +
1691481012.7710216-UTR-H-paniculata_contig2647:11104..11132	1691481012.7710216-UTR-H-paniculata_contig2647:11104..11132	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2647 11105..11132 +
1622929792.3079882-UTR-H-paniculata_contig2647:18982..19705	1622929792.3079882-UTR-H-paniculata_contig2647:18982..19705	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2647 18983..19705 +
1691481012.8600738-UTR-H-paniculata_contig2647:18982..19705	1691481012.8600738-UTR-H-paniculata_contig2647:18982..19705	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig2647 18983..19705 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2647.7225.1	prot_H-paniculata_contig2647.7225.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig2647 11133..18982 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig2647:10189..19705+
coding sequence from alignment at H-paniculata_contig2647:10189..19705+

protein sequence of mRNA_H-paniculata_contig2647.7225.1

>prot_H-paniculata_contig2647.7225.1 ID=prot_H-paniculata_contig2647.7225.1|Name=mRNA_H-paniculata_contig2647.7225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=314bp
MAFGGGSGSMLVLNDPAAHLSGNKATPVASLSAFASTNDLVVKVHPMVLF
SVLDHYLRRPENQKRVIGTLLGTVSANMVEITNSFAVPHLEKNDEVAVGK
DFNKSMLALQQKVNGRESIVGWYATSFDGVLIVDDSSLIHDFYTGECERP
VHLVVDTALKDNIVGCKAFISTPLEIGGTALANVFHEVKVELVSTEAERI
CIDRMVKGQDAPFTTPEGLAAVESRMASLETSMQRLLDMLQQADEYVATV
VGGEHPADPHMGRKLADTLAAVPRMRPETFKRLFDDNLQDLLMVSYLSSL
TRTQLEIAEKLAA*

mRNA from alignment at H-paniculata_contig2647:10189..19705+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig2647.7225.1 ID=mRNA_H-paniculata_contig2647.7225.1|Name=mRNA_H-paniculata_contig2647.7225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9517bp|location=Sequence derived from alignment at H-paniculata_contig2647:10189..19705+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCACCGTTTCCTCGTAGGTCACCCGCCACATTTTCACTTTGTCACAACAC
CTCTGTTCTTTGCGAGGCGAACTGTTACAGCTGGATAAGGTGTAGCAAGG
ACGAGAACATCCTGCCCAACCACGGTGGCAACTGATCGAAGTTCCTTCGT
AGCGTCACAGTTGCTCCCCGATCGACTCCAGAGTGAGTGCGCCAAGTGTT
GCACGATGGAAATGGGTGGTGTTGGCTGTAGAGAGATGGTGGGACTTGTG
AGGTCGTGCGCTTTGGATGTGACATGAAGCATGTCTCACGCATTATCGGG
TTGAGGAATGACGTGCGTGTGTTTTCGTTTAGACAAGAGATGTCGCGTTC
ACGTTCGCGGGACTGCAGAGAGTCTCCAAGAGATAGGTTGAAATGTTTAT
GCTGAAACTTGAGTGCCGATTTTGATGCCCTGGAATGACTGCAGTAATCT
GGGGCTGCAGTTGATATGTGGTATTACCGTCTTAAGGGTAGAAAGCAATG
CAGCAGAGCATCACACAACTCTTGCTGGCAGATGCCTCTATTGTAAAAGT
GTAGCGCAGCAGATGTGCTGCAGCCACGTGGGGCCAGAAGAGTGTCCAGC
GACGTACTTGTCCGTAAATTCATCTGTGTACGTAATTTCAAATTGTGTAC
ACGGAACCTTGATCCTCAGGATAAAATGGAAATACAGGATTCAAATGTTG
TACGTTCACGTGCATGGATAGCACGGGTAGTGTTGATAGACTGAACCACT
TTGTGTTGATTGTTGAGCCCCGTCTTACTTATATACTCTCCCGACTTCGA
AGTAACACATGAAGTCTAATGGTGCGCAGTTAGGTCGTATTGCAGCACGG
CTTAATACTTGACCAGTTTGCCAAACCAACCGTTTCATGCACGTCCGAAA
TGCGCGGGACATGTAGCGCCTCGAGCGTGTCAGGCGGTGTCAGGATGGCT
TTCGGAGGAGGCTCTGGCTCAATGCTGGTGTTGAACGACCCTGCAGCACA
TCTGTCTGGGAACAAAGCTACCCCAGTGGCGAGTTTGTCAGCGTTCGCGA
GTACGAATGACCTTGTGGTTAAGGTATGTACCTTCTGTCTACGGAATGGT
ACCGGAGATGGTCGACTGAATACCTCCCCCTATTGGCCGTACCAGTGTAT
AGTACAAGTTTTTTCCCCCTTCACCATTGTAAAGATGGACACGCATTCAT
ATCGTTGCCCTTCCTTTGATGGAAGGAAGCAGTGGTGCCGGGCAGTTACA
CCTTGTAGCGAAATATTGGTGTTTCGATCCAGTGTTGCCCCATGTGAAGC
CTGTGTTGACTGGCTTGGGTTCAATTGTATCATTGCCACTTTATATATAA
TGCGGTATACTGGGTCATCTCGAAAGTCTGGGGCAAATAGAAGACAAGTA
GAAACAAACGTCTCAAATGGCCCTTGGTGATGCTGTTGTCTTTACATCTC
GATGCCACTCACGGATTGGTGTTTGCACAGGTGCACCCGATGGTCCTGTT
CTCCGTATTGGATCACTACCTCCGACGACCGGAAAATCAGAAAAGAGTAA
TCGGTACTTTATTGGGTACTGTGTCTGCGAATATGGTGGAGATCACCAAC
TCGTTCGCTGTTCCCCATCTGGAGAAAAATGACGAGGTAAAGCGTAATTT
TCACAGTCCAAACGGAAATGCAGTTGTGAACGGTAGTGGGGATGTCTGGT
GTAGAGTGACTCACTGGTCGTCTGTTGGATATTTGACGGGACGTGAAATT
AAACAGTCAGGATTTGGGTAGCAAGTGAGATTATCTAATATGTGCAGTAG
TATCGTGATCGAATAGCGTTCGAACGTTGTATACATCCAGAGAATATAGG
GTTTATACTGTACGCATTGCAATTTTCCTGGTGAGGGATGATCCTGTTTG
TGATGTCGACACCTGCTATATCAGGTCGCCGTGGGGAAGGACTTCAACAA
GTCCATGCTCGCCTTGCAGCAGAAGGTCAACGGACGTGAGTCCATTGTAG
GCTGGTGAGGCACGGAAGTACCTTGAACATGAAGTCCAAGGTGGACGTTG
AATAGTGTAATCATTTTTCGAGAAAATCGAAGGCATCCAAAAGCACGTTT
CGAAGCCGGACCTGTGTACCATGAATGACATGTTCCGGTCAAATAATCGC
TGCTAGAACAACTCGCCCCAAAATAGGGTGGCTAGAGGTTTTGGGTGGGA
GGGGTTTGCGATAGACCTGCTCACGTTGCAAGAGTCTGTCTGGTCGAACC
TTCTCTCAATAACCTCACGCGCATTAATCGTGAGTATTGGGAGCGTGTTG
CTTCAATAAATAAACGTGATTTTAAGTGCGTCTCACTACGCCAGCTTAAT
GGAGATTGGAGCGCGAAGTACAGGTATTGAGAAACATCAAAGTTTGTTAC
GGTTGCCTTGCCGTCCCTTGCTGCACACCAAGTTTATGAGATGTAACGTC
TTTCGCTATCTTTGCATATCGACTTTTGGTGAACGTGAAGGTACGCCACA
TCCTTCGACGGGGTCCTGATCGTGGACGACTCGTCATTGATTCATGACTT
CTACACGGGGGAGTGTGAGCGCCCAGTGCATCTCGTCGTCGACACCGCGT
TAAAGGTACTAGATTGTACGGCATAATGTATCTGTGCTTCATGGTTAAAA
TACGTCAAATACAATAAATCCTGATAACGATAAATGTTTCCAGAGATGTG
TGCTTCAGGTGTACCTCGAGATGGCATGAGCATCTGTCTTACGATTACCT
CAGAGAAATCTTGATCTGTCAGCGATATGTGTTGTTGGAAACTGAAATTT
CTGTAGGTCTCCCGGGCACGTTGTATGATACTGGAAGAAGGCGCCGTTCT
GAAATCTGGATTATTACTGTGGTTCCCAGGTCGTGCCTTCGAAGGAAGGA
ATATTAGACCACGATAAACTGAGGAACCTTAGCATTATGAATGTGTGATG
AATGTCATACCGTGGTCTGCCCCTCTGAAGTTTTGGAAAATACGGGATGA
ACATTTACATCGGGGTAGACGATGTATGTGTGTTCTCCTGTTGGTCGGTA
CGGAGAACGTCGCCCGTGATGTCGAAACATTATAAAGACTTTTATGCTGA
CCTGACAATGAGGAAGCAAAACTGACTACGATGGACTGAGGCACCACCGA
ATTTCAAATGTTTGATATTATGTGTATACCCATGTGATGGATCAAACCGT
CGCATGCCCCCTCGAAGTTTCAACATCTACTGGATGAATAGATGTGCCCG
CGTTGGACGAAGTAGGTGGGCCCTCCTGTTGGTCATACGCAGACTGTTGC
CGGTGATGTCGAAACTTTATAAAGACTTTGATGCTGACCTGACAATGAGG
AAGCAAAACAGACTACGATGGACTGAGGCACCACCAAATTTCAGATGTAT
GATATTATGTGTATACCCATGTGATGAAGATCAAACCGTCGCATGCCCCC
TCGAAGTTTCAACATCTACTGGATGAATAGATGTGCCCGGGTTGGACGAA
ATAGGTGGGCCTTCCTGTTGGTCATACGCAGACTGTTGCCGGTGATGTCG
AAACTTTATAAAGACTTGGATGCTGACCTGACAATGAGGAAGTCAAACAG
ACTACGATGGACTGAGGTACCACCAAATTTCAAATGTATTATATTATGTG
TATACCCATGTGGTGAAGATTAAACCGTCGCATGCCCCCTCGGAATTTCA
ACATCTACTGGATGAATAGATGTGCCCGAATTGGACTAAGTAGGTGGACC
CTCCTGTTGGCTCATACGCAGACTGTTGCCCGTGATGTCGAAACTATAAA
GACTTTGATGCTGACCTGACAATGAGGAAGCAAAACAGACTACGATGGAC
TGAGGCACCACCTAATTTCAAATGTATGATATTTTGCCACCTGCCGGTTA
TGAGATGCTGGCATGATCATACATATGTTTGTCTCACTGAGGACTGCTTA
CACAGAGTTGATAAAGGAGCCGGGATGGAGGCAGTGGGTTGGCCCATCTT
GTACGAAGAATGTTGCCGGTGATGTCGATTTATGAAGACTTTGATGCTGA
CCTGACACTGATGAAGCAACATAAGACTACGATGGACTGAGGCACCATGA
AAACACAAAAGTAGGATATTATGCAACTCGCCGGATATGTTATTTGTGTG
ATCCTGTAACCTCCTGAAGTACCCCTCAGTAACGCTCGAGGGTTGAAAGA
GAGCATGTGTGTAAGTGGCCGGTGATGTCGATTTATGAAGACTTTGATGC
TGACCTGATAGTGAGGAAGCACTACAAGACTACGATGGACTGAGGCACCG
AACAGAAGATTGAAGTGATTAGGGTGGGGTTGCAGTAGCTCCAATCACAT
CGTCGTCGGTCGTGCGGAAGACGACGGCGGCGTGTAGAACTCGCAGTGTA
GACCATGATGCCACTTGTCGGTTTTGAATGAGGTTTTCTTTCGGCATACG
GCGCCATGTAATATAGCGGTGAGTGACGCAACATCACCATCGGCAGAAAA
GGCTACAGTTCATGGCAACTGGTCTGAACCATGCTCCATATTCCACGCGA
CGCATCTCCGTGTGACCTTTCAACCGATTGATTCTAACATTGCCCCTAAC
CGTCCCCGGTATTGAAGGCTGCTTGAATATTTTATTGTGCCATGCAGCTA
AACTGACACGAGTCGTATACAAATGAAGTTCTGGATATGAACATGCGAAA
AACGTTCCCGCGGCTTGACCCTCTCGAAAATCGTTCATTCCATGTAATGT
TAATAGTTGAGTTACAGTGCAGTCGAGCAACAGCGTCAACTAGCGATCCG
TAAGTGGATGAACATTTAGTGATGGACATTTTGTTCTACCTCAAGTTAAA
AATTTATCCATGTCCCTTTTCCCGTGATGACAGGATAATATCGTTGGATG
CAAGGCGTTCATCAGTACCCCGTTAGAGATCGGGGGTACTGCCCTGGCCA
ACGTCTTCCATGAGGTGAGTCAATAAATGTCGGTTTCTGCCAGTCAAATC
GCCCATGTGACTTACTGCACGGTTCGCTGAGGATATACGCCTATGTGACT
TACTGCTGTATACACCTTCCTTGTACTTGAATAGGTGAAGGTGGAGCTCG
TTTCGACGGAAGCGGAACGAATCTGTATTGACCGAATGGTGAAGGGACAA
GATGCTCCCTTCACAACACCGGAGGGGCTTGCCGCGGTGGAAAGTCGTAT
GGCTAGTTTGGTGAGCGGTTCTCCATGGAAATTGTCTATTCCTTTCGGGC
CACCAATGCTGGACGTTCATCGTGTGTACAATGAACGCTACAGTAGGCCA
AGGGTAATATCTAAATCGACATATTCAGTACGTGTAATATCAATCGCGAC
TTGTCGTTTGTTGGTCCGTTTTAGGAAACTTCGATGCAACGGTTGCTGGA
CATGCTGCAACAAGCTGACGAGTACGTCGCAACGGTAGTGGGCGGGGAGC
ATCCTGCAGACCCACACATGGGGCGGAAGGTGAGAGTTGGAGTACAATGG
CCATGTTTTTGTTCTGGTGTAGCCTCAAGGTGTTAAGTTCAATTGGACAG
TATCTGAATTTTTTTTTGTCGAGTGTGGCAGAAAGTATATATGAAGTCCT
TCTAAACAGCGATTGAAATGTAATTCATGTCTGATATGCGGGAAGAAAGG
AAGATGTTGAAATCTATCAGCTTTATAATGTGGTCGACCATTATTCCCTC
GAACGAAGCGCTGGAGTGCCTAATGGGTGGAACCGCTGTTTTTTTTCAAG
TCCAAACGTGACTGGACTGATACTCTCTGTTTATCGACGGTGGGTTCAAG
CCTTGACGTAAAATCACGAGTCGACACGAGCTCTTTCGAGATACGTTTTC
GAGGGAAATATTTGGTAATAAAAAACATTTGATCACATTTCGGAGGGTGC
CATGCTTCGTCTCATATTTTTAACCGTCGTACTAAATATGCCGTGTCTGC
TGTAAAGTGTTCGACAACATGTTGGGTTGTGTAGCAAGTTGCTGTGGTCC
AATGAGCGCTAACTAAAGGTAATTTACGCCTGATCGATTTGATGACACGA
ATTTGGTGAGGACCGCGGGACAGTATATGTACATTATCCCCAACGATAAT
CTGTACGCATTTCGATTCTAATTTACATATTGATGAATTGATGGTGAAGA
ACCACTCAAATCTTTTTCAATCACGTTCATGGCGTGGGTCATGAGTTTGC
GGTGGTCCCATGAGCGCTTATTAAAGGTAATTTACGCCTGATCATTGTGA
CGACACTAATTTGGTGAGGACCGCGAGACAGTGTATGCACATTATCCACA
ACGATAATCTGTGAGTCTCATGGTTTTGATCTAATGTACTGATCTAGAAA
AACCATCCAAATTATACACAAACACATTTATGTTGGCGTAGGGCAAGACT
TTTCGGTGGTCCCGTGAGCGCTAATTAAAGGTAATTTACGCCTGATCATT
GTGACGACACTAATTTGGTGAGGACCGCGAGACAGTGTATGCACATTATC
CCTCACGATAATCTGTGAGTCTCACGGTTTTAATTTAATGTACTGATCTA
GAAAAACCACCCAAATTATATACAAACACGTTCCATGTTGGCGTAGGTCA
AGACTTTGCGGTGGTCCCGTGAGCGCTAATTAAAGGTAATTTACGCCTGA
TCATTGTGATGACACTTAGTTTGTGAAGACCGCGAGACACAGTATATCAA
CATTATCCGACACGATAATCCGTACGCATTCCAATTCTTTTCAATATATT
TGATACTTTACTTTCATGGCGTGGGTCATGAGTTTGCGGTGGTCCCATGA
GCGCTAAATAAAGGTACTTTACGGCTGATTATTGTGATGACACCTATTTG
GTGAGGACCGGGGGACAGTACATGTACATTATCCAAAACGATAATTCGTA
CGCAGTCTAATTATTCAATATATTGATGAAATGATCCTGAGTTACGCAAA
TCATAAACGAACACATTCATGTTGACGTGGGTCATGAGTTTGCAGTGGTC
CCATGAGCGCTAATAAAAGGTTATTTTCGCTTGATCAATGTGATGACACA
TACTTTGTGAGGACCGCGACACGGTGCATGCACATTATTCCTCACGATAA
TCTGTACGCATTCCAATTTTGATATCCATATTGATAGATTGATATTGAAG
AATCACCCATTTCATTTACAATCACATTCTTGTAGGTCAGGAGTTTGCAG
TGGTCCAATGAGCGCTAATTAAAGGTAATTTACGCCTGATCAATGTGATG
ACACTAATTTGGTGAGGACCGCGGGACAGTATATACACATTATCCCCAAC
GATAATCTATACGCATTCCAATTCTAATCTACATATTGATGAATTGATAC
TGAAGAATCACTCAAATCTTCACGTTCATGGCGTGGGTCATGAGTTTGCG
GTGGTCCCATGAGCGCTTATTAAAGGTAATTTACGCCTGATCATTGTGAC
GACACTAATTTGGTGAGGACCGTGAGACAGTGTATGCACATTATCTCAAT
GATAATCTGTGAGTCGTGATTTTAATTTAATGTACTGATCTAAAAAAACC
ATCCAAATTATGTACAACCACGTTCTTGTTGGCGTAGGTCAAGACTTTGC
GATGGTCACATGAGTGCTCTTTAAAGGAAGATACTTCGCCTGATCAATGT
GGTCACCTATTTTGTGGTGGCCACCGAATCGCGTTTATTTGTTGGTGAGG
AGCATGCGTCTGAAGTTTGTTCGTCGATGTCTGTTCGAAAGGGTATAAAA
ATTCCGTGCAAAAAATTTACCGGGCCACAAAGTTGGCTCGGTAATGGGCG
TCACGTTCCGATGAACACTAGAGAAGGTAATTTACGTCTGAGTCATGTGA
TGACAGCTATTTTGGTGAGGACCTTATGTAGGAATGTAGCAGTCGAGTTT
GCCTTGCTTCGTTGGGCATAGTTTTTGATGAGCCGCCCGTAGGAAGAGAT
GTCATGCACACGTTCCAGCTGAAATTCTTTGGATGGTCCAGTGAGCTCAA
TATTTAATTAAACGCTGAGCCCTTCGGGGAATGCAGGAAGATCTTGAAAT
TGTGAGGACCAGACGAGCTGAATAGATGAAATGCTGATGTGTGACGTAGG
TCACTAGCAAGTTTTGACGTCTAATGAATTCCCTAAATCTGTTTACCCGA
ATGGGTTAGTATTGGTAACCTAACCGTGTGGTGTTATCGACACAGGTGTT
GCCCGCATCGCCGAGGAGCGCATGCAAGTGCACCGAAAGTTTGGTTGATT
CATTAGTTAATTTACGTTTTCTGATATGTTTCATCGTTACTAGTAGTATG
GTTGTGGTACTATCGTGTTTCTGCTATTTCTTAATGACTCATCTATTTTT
ACACCGGGGAGATTCGACGTGATATTGGGCATACATTGAGGTTTTTAATG
TTCATTTCTAGTACGTTTAAAATAATTTTATTGTTGAGTAGCCTGGGTTT
AATTCCACGTTCTTTTGGTCACTCGTTAGTGGGAACATGCAGTTTTATAC
GGGTACCTATTATATGTATCCATGCTTGAAGCTTGGTTATATAAGTGATC
AGAATGTGGTGATGGTACGTTGTGGTTGACAAACTCACTGGTTGCACCTT
GTATTTTATTCGCTTTCGATGTGATGTTTTTTCGTTCTCCTCAGCTGGCG
GACACACTTGCAGCTGTGCCTCGCATGCGGCCAGAGACGTTCAAGCGACT
ATTCGACGACAATCTTCAAGATCTGCTCATGGTGTCGTATTTAAGCAGCC
TCACACGAACACAACTTGAGATTGCGGAGAAGTTGGCTGCATGATTTGTT
TCTTGTTGGAGTAATGGGAAACGAGGAAAACGTGAATTGTGCGTTGTGTA
TACACATGTAAAAGTTGAGCATGTAGTGCACAAGCTTATCCATACTTGTA
CATTCCTATTGCAGTAGAAGTGTTGGGGGATTTTCTTTTGTGTATCGTGG
CTGTAGGATAATTATTTTTTTGTAGTTGAACAGGCTTGTGTTCGAAGCAA
GATTCCAGTCTGTTCTTGTACACATGCGTGAAGATGTCATCAGTTTACAA
CGGCAACTGGACTTCGTCATGGATTGTCACAACGTGGTGTTATTACTAGG
AATATGGGTTCTATGAGAGTCGTGTGTACTGCTTCCCAGGTGGGAGTCCT
GTCGGAAATTGGTCCCACTCTCAACAGTCGACTATCTGCCCCTAACGTCA
TAAGTCACCTACTTGAAATATCAAATGAAAGTCAATATAATGTCGAGCAA
TCGTGGAGGTAATGAGCCGCTGTCATCGAAGCCATTTCAAATCGTCGAAT
ATATTCCACACTGAATGTTATCTGGACAAGATTTTCCTCGCGGGGAAATA
TGGGTACTATCGTACGAAGTAAAAGTCCATTGTGCGCAAATGCTCTTCTC
GCGCACGTGGGTGATGCTACAACGCTGGGGATGGTACCGCAGGGCTGTGC
TAGAAAACTCAATTTATTTTCTGTATAATCCGTGTATGATCATTGTTGTC
GATCGTGTTGGAAAAAA

Coding sequence (CDS) from alignment at H-paniculata_contig2647:10189..19705+

>mRNA_H-paniculata_contig2647.7225.1 ID=mRNA_H-paniculata_contig2647.7225.1|Name=mRNA_H-paniculata_contig2647.7225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1884bp|location=Sequence derived from alignment at H-paniculata_contig2647:10189..19705+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTTTCGGAGGAGGCTCTGGCTCAATGCTGGTGTTGAACGACCCTGC
AGCACATCTGTCTGGGAACAAAGCTACCCCAGTGGCGAGTTTGTCAGCGT
TCGCGAGTACGAATGACCTTGTGGTTAAGATGGCTTTCGGAGGAGGCTCT
GGCTCAATGCTGGTGTTGAACGACCCTGCAGCACATCTGTCTGGGAACAA
AGCTACCCCAGTGGCGAGTTTGTCAGCGTTCGCGAGTACGAATGACCTTG
TGGTTAAGGTGCACCCGATGGTCCTGTTCTCCGTATTGGATCACTACCTC
CGACGACCGGAAAATCAGAAAAGAGTAATCGGTACTTTATTGGGTACTGT
GTCTGCGAATATGGTGGAGATCACCAACTCGTTCGCTGTTCCCCATCTGG
AGAAAAATGACGAGGTGCACCCGATGGTCCTGTTCTCCGTATTGGATCAC
TACCTCCGACGACCGGAAAATCAGAAAAGAGTAATCGGTACTTTATTGGG
TACTGTGTCTGCGAATATGGTGGAGATCACCAACTCGTTCGCTGTTCCCC
ATCTGGAGAAAAATGACGAGGTCGCCGTGGGGAAGGACTTCAACAAGTCC
ATGCTCGCCTTGCAGCAGAAGGTCAACGGACGTGAGTCCATTGTAGGCTG
GTCGCCGTGGGGAAGGACTTCAACAAGTCCATGCTCGCCTTGCAGCAGAA
GGTCAACGGACGTGAGTCCATTGTAGGCTGGTACGCCACATCCTTCGACG
GGGTCCTGATCGTGGACGACTCGTCATTGATTCATGACTTCTACACGGGG
GAGTGTGAGCGCCCAGTGCATCTCGTCGTCGACACCGCGTTAAAGGTACG
CCACATCCTTCGACGGGGTCCTGATCGTGGACGACTCGTCATTGATTCAT
GACTTCTACACGGGGGAGTGTGAGCGCCCAGTGCATCTCGTCGTCGACAC
CGCGTTAAAGGATAATATCGTTGGATGCAAGGCGTTCATCAGTACCCCGT
TAGAGATCGGGGGTACTGCCCTGGCCAACGTCTTCCATGAGGATAATATC
GTTGGATGCAAGGCGTTCATCAGTACCCCGTTAGAGATCGGGGGTACTGC
CCTGGCCAACGTCTTCCATGAGGTGAAGGTGGAGCTCGTTTCGACGGAAG
CGGAACGAATCTGTATTGACCGAATGGTGAAGGGACAAGATGCTCCCTTC
ACAACACCGGAGGGGCTTGCCGCGGTGGAAAGTCGTATGGCTAGTTTGGT
GAAGGTGGAGCTCGTTTCGACGGAAGCGGAACGAATCTGTATTGACCGAA
TGGTGAAGGGACAAGATGCTCCCTTCACAACACCGGAGGGGCTTGCCGCG
GTGGAAAGTCGTATGGCTAGTTTGGAAACTTCGATGCAACGGTTGCTGGA
CATGCTGCAACAAGCTGACGAGTACGTCGCAACGGTAGTGGGCGGGGAGC
ATCCTGCAGACCCACACATGGGGCGGAAGGAAACTTCGATGCAACGGTTG
CTGGACATGCTGCAACAAGCTGACGAGTACGTCGCAACGGTAGTGGGCGG
GGAGCATCCTGCAGACCCACACATGGGGCGGAAGCTGGCGGACACACTTG
CAGCTGTGCCTCGCATGCGGCCAGAGACGTTCAAGCGACTATTCGACGAC
AATCTTCAAGATCTGCTCATGGTGTCGTATTTAAGCAGCCTCACACGAAC
ACAACTTGAGATTGCGGAGAAGTTGGCTGCATGACTGGCGGACACACTTG
CAGCTGTGCCTCGCATGCGGCCAGAGACGTTCAAGCGACTATTCGACGAC
AATCTTCAAGATCTGCTCATGGTGTCGTATTTAAGCAGCCTCACACGAAC
ACAACTTGAGATTGCGGAGAAGTTGGCTGCATGA