mRNA_H-paniculata_contig26462.7222.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE) HSP 1 Score: 333 bits (854), Expect = 2.940e-109 Identity = 156/233 (66.95%), Postives = 190/233 (81.55%), Query Frame = 1
Query: 1 IPAFWSWMNPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANVASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVL-SADYYQPSATDGWESILRKASSEWDSDEVGAVFGDYFLLEAMVRF 696
IPAFWSW NP+ P+W+ AVNVDM+MNMEIMLWAA NGG+ Y AVE HAD TW D+VRDD ST+HVA YDP+TG+LVD+GTYQGWQD STWSRGQAWAIYG+ MVYR+LK++RFL Y+I L YF N+ DNVP++DFDAP D NPKDSS+TAIV SALFELFE TG+P YLE AQ +L+S+L S+ Y+ SATDGW++ILR +++ W + VG+V DYFLLE+MVR+
Sbjct: 80 IPAFWSWANPTNEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDEAVGSVTADYFLLESMVRY 312
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI) HSP 1 Score: 332 bits (852), Expect = 4.790e-108 Identity = 157/233 (67.38%), Postives = 190/233 (81.55%), Query Frame = 1
Query: 1 IPAFWSWMNPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANVASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVL-SADYYQPSATDGWESILRKASSEWDSDEVGAVFGDYFLLEAMVRF 696
IPAFWSW PS+ P+W+ AVNVDM+MNMEIMLWAA NGG+ Y AVE HAD TW D+VR+D ST+HVA YDP+TGDL D+GTYQGWQD STWSRGQAWA+YG+ MV+R+LK ERFL SI L YF N+ DNVP++DFDAPE+ NPKDSS+TAIV SALFELFE TG+P YLE AQ +LSS+L S+ Y+ SATDGW+++LR++++ W D VG+V GDYFLLEAMVR+
Sbjct: 80 IPAFWSWKKPSKEPQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENSDNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDSVGSVTGDYFLLEAMVRY 312
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI) HSP 1 Score: 319 bits (818), Expect = 3.740e-103 Identity = 152/233 (65.24%), Postives = 183/233 (78.54%), Query Frame = 1
Query: 1 IPAFWSWMNPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANVASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVL-SADYYQPSATDGWESILRKASSEWDSDEVGAVFGDYFLLEAMVRF 696
IPAFWSW NP P+W+ AVNVDM+MNMEIMLWAA N G+ Y A E HAD TW D+VRDD STFHVA Y+ +TG+LVD+GTYQGWQD STWSRGQAWAIYG++MV+R+L+K RFL Y I L YF N+ DNVP++DFDAP D NPKDSS+TAIV SALFELFE TG+P YLE Q +LSS+L S +Y+ SATDGW++ILR +++ W VG+V DYFLLE+MVR+
Sbjct: 138 IPAFWSWANPKSEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDSDNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGDAAVGSVTADYFLLESMVRY 370
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE) HSP 1 Score: 305 bits (781), Expect = 1.190e-95 Identity = 154/235 (65.53%), Postives = 184/235 (78.30%), Query Frame = 1
Query: 1 IPAFWSWMNPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANVASDNVPFSDFDAPEDEF-NPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVLSADYYQPSATDGWESILRKASSEW-DSD-EVGAVFGDYFLLEAMVRF 696
IPA+WSW NPSRRP+WD AVNVDMMMN+EI+LWA NGG D + V GHAD+TWKDIVR+DNST HVAAYD TG+L++ GTYQG+ +SSTW+RGQAWAIYGY MVYRFL ++RFL SIGLLEY+E N+ D +P +DFDAPE N KDSS+ AIV S L ELF T DP YL +Q+YLS++ + YQP ATDG++SILR+A EW D D E+GAVFGDYF LE MVR+
Sbjct: 205 IPAYWSWENPSRRPDWDRAVNVDMMMNLEILLWAGLNGGED-HELEVAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALFAGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRY 438
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI) HSP 1 Score: 231 bits (589), Expect = 1.390e-71 Identity = 114/172 (66.28%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 1 IPAFWSWMNPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANVASDNVPFSDFDAPEDEF-NPKDSSSTAIVGSALFELFETTG 513
IPA+WSW NP++RP+WD AVNVDMMMN+EI+LWA NGG D + VEGHAD+TWKDIVR+DNST HVAAYD TG+ ++ GTYQG+ +SSTW+RGQAWAIYGY MVYRFL ++RFL SIGLL+Y+E N+ D +P +DFDAPE N KDSS+ AIV S L ELF TG
Sbjct: 168 IPAYWSWENPTKRPDWDRAVNVDMMMNLEILLWAGLNGGED-HELEVEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETG 338
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE) HSP 1 Score: 219 bits (558), Expect = 2.720e-67 Identity = 115/218 (52.75%), Postives = 141/218 (64.68%), Query Frame = 1
Query: 1 IPAFWSWMNPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANVASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVL-SADYYQPSATDGWESILRKASSEWDSDEVG 651
IPAFWSW NP P+W+ VNVD+++N EI+LWAA NGG Y AA A DL G YQGWQD STWSRGQAWA+YG+ MV+R+LKK+RFL Y+I L YF ++ DNVP++DFDAP D NPKDSS TAIV SAL ELFE G+P YLE AQ +LSS+L S+ Y+ ATDGW++ILR ++ W + VG
Sbjct: 63 IPAFWSWANPKNEPQWERVVNVDVIINTEIVLWAAVNGGKANY------------------------SAAAARARADLG--GAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFLEYAINTLSYFIDSLPDDNVPYADFDAPVDSDNPKDSSVTAIVTSALLELFELIGEPSYLEKAQEFLSSLLLSSTYFDSLATDGWQAILRNSAPAWGDEAVG 254
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT) HSP 1 Score: 217 bits (552), Expect = 7.070e-65 Identity = 117/237 (49.37%), Postives = 156/237 (65.82%), Query Frame = 1
Query: 1 IPAFWSWMNPSRRPEWD-MAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYF----EANVASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVLSADYYQPSATDGWESILRKASSEWDSDEVGAVFGDYFLLEAMVRF 696
I AF +W P + VN+DMMMNMEI+LWA+++GGN A+ A HADA+W+D+VRDD STFHV Y+ G + + T+QGW+ STWSRGQAWA+YGY M+YR+ + R L + +YF EA V D VP+SDFDAP D NP+D+S+ AIV SA EL++TTG+ YL A++ L+S+ A Y S +ES+L K S +W EVGAV GDY+ +EAM R+
Sbjct: 158 IGAFRAWPASDSTPNTEPFEVNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYN-LDGSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQV-DDYVPYSDFDAPIDSENPRDTSAAAIVASAALELYQTTGEQKYLTAAENMLNSLTQAPYL--SIGTDYESVLAKGSEKWGEPEVGAVTGDYYFIEAMWRY 390
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL) HSP 1 Score: 201 bits (510), Expect = 4.190e-59 Identity = 108/239 (45.19%), Postives = 149/239 (62.34%), Query Frame = 1
Query: 1 IPAFWSWM----NPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANV---ASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVLSADYYQPSATDGWESILRKASSEWDSDEVGAVFGDYFLLEAMVRF 696
I AF SW NP+R P VN+D +MNME++LW ++ + HAD TW+ VR++ ST+HV +Y P+ G++V + T+QGW+ STWSRGQAW++Y Y M YR+ ER L SI EYF + D VP+SDFDAP D+ NP+DSS+TAIV SAL EL++ T YL AQ L+S+ + Y + + ++SIL K S +W EVG +FGDYF +EA+ R+
Sbjct: 166 IGAFRSWRQGISNPTRLP---FEVNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSPS-GEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPIDDDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASLSTPKYL--AMDNNYQSILLKGSEKWGEPEVGTIFGDYFFIEALYRW 398
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: D7FUK3_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUK3_ECTSI) HSP 1 Score: 192 bits (489), Expect = 8.760e-59 Identity = 93/153 (60.78%), Postives = 118/153 (77.12%), Query Frame = 1
Query: 241 QGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANVASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVL-SADYYQPSATDGWESILRKASSEWDSDEVGAVFGDYFLLEAMVRF 696
+GTYQGWQD STWSRGQAWAIYG+ MV+R+L ++RFL Y+I L YF N+ DNVP++DFD P D NP DSS+TAIV SALFELFE TG+P YLE AQ +L S+L S+ Y+ SATDGW++ILR +++ W +G V DYFLLE++VR+
Sbjct: 5 RGTYQGWQDDSTWSRGQAWAIYGFTMVHRYLTEQRFLDYTINTLSYFIDNLPDDNVPYADFDDPVDSDNPNDSSATAIVTSALFELFELTGEPSYLEKAQEFLPSLLLSSTYFDSSATDGWQTILRNSTAAWGDAAMGFVTADYFLLESIVRY 157
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F) HSP 1 Score: 194 bits (492), Expect = 2.020e-56 Identity = 106/239 (44.35%), Postives = 142/239 (59.41%), Query Frame = 1
Query: 1 IPAFWSWM----NPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDIVRDDNSTFHVAAYDPATGDLVDQGTYQGWQDSSTWSRGQAWAIYGYVMVYRFLKKERFLSYSIGLLEYFEANV---ASDNVPFSDFDAPEDEFNPKDSSSTAIVGSALFELFETTGDPVYLETAQSYLSSVLSADYYQPSATDGWESILRKASSEWDSDEVGAVFGDYFLLEAMVRF 696
I AF SW NP+ P VN+D +MNME++LW N Y HAD TW+ VRD+ ST+HV +Y+ G + + T+QGWQ STWSRGQAW++Y Y M YRF ER L SI +YF + +D VP+SDFDAP D NPKD+S+TA+V S L EL+ T D YL A++ L S+ +Y +++IL+K S +W EVG +FGDYF +EA+ R+
Sbjct: 165 IGAFRSWNQRIDNPTTLP---FEVNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYN-LDGSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVRNPKDTSATAVVASGLLELYHITKDEKYLNDAEAMLISLAKPEYLARETE--YQAILKKGSEKWGEPEVGTIFGDYFFIEALYRW 397 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26462.7222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26462.7222.1 >prot_H-paniculata_contig26462.7222.1 ID=prot_H-paniculata_contig26462.7222.1|Name=mRNA_H-paniculata_contig26462.7222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=225bp MNPSRRPEWDMAVNVDMMMNMEIMLWAAENGGNDAYVTAVEGHADATWKDback to top mRNA from alignment at H-paniculata_contig26462:138..3054+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26462.7222.1 ID=mRNA_H-paniculata_contig26462.7222.1|Name=mRNA_H-paniculata_contig26462.7222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2917bp|location=Sequence derived from alignment at H-paniculata_contig26462:138..3054+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26462:138..3054+ >mRNA_H-paniculata_contig26462.7222.1 ID=mRNA_H-paniculata_contig26462.7222.1|Name=mRNA_H-paniculata_contig26462.7222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1350bp|location=Sequence derived from alignment at H-paniculata_contig26462:138..3054+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |