mRNA_H-paniculata_contig26450.7218.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: D7FLD6_ECTSI (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLD6_ECTSI) HSP 1 Score: 210 bits (535), Expect = 5.070e-64 Identity = 102/129 (79.07%), Postives = 112/129 (86.82%), Query Frame = 1
Query: 1 MIAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRLG 387
+I AKYMPI WTKFLIGGPWRAGRRAIA AL TL++ G YVDLYQ VHFPFPY GGMDA+AEGL+RAC+RGLCRSVGVSNFNA+Q+R FS+KL KH I +ASNQFEYSLVNRD E DGTL ECKRLG
Sbjct: 150 LIGAKYMPIFWTKFLIGGPWRAGRRAIAKALTATLEKGGWAYVDLYQ-VHFPFPYFGGMDALAEGLSRACDRGLCRSVGVSNFNAQQMREFSEKLGKHGITLASNQFEYSLVNRDAETDGTLAECKRLG 277
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A835Z353_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z353_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.680e-33 Identity = 69/133 (51.88%), Postives = 91/133 (68.42%), Query Frame = 1
Query: 1 MIAAKYMPILWTKFLIGGPW-RAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFP-YLGGMDAMAEGLARACERGLCRSVGVSNFNAEQ--LRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRLG 387
M+ AKY P+LW +GG RAGRRA+ AL+ +LD+ G YVDLY +HFP Y+GG+ A+AEGLA+A ERGLCR VGV N N Q +R F +KL K ++ + +NQ EYSL ++ +DGT+ ECKR G
Sbjct: 130 MVGAKYTPVLWPGAAVGGLLPRAGRRAVVKALQRSLDRLGLAYVDLYS-LHFPTGRYIGGLGALAEGLAQARERGLCRHVGVCNMNGAQASVRDFKEKLAKFDVPLIANQIEYSLADQTAAEDGTIAECKRQG 261
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A7S2SPM1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPM1_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.950e-32 Identity = 62/128 (48.44%), Postives = 88/128 (68.75%), Query Frame = 1
Query: 1 MIAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRL 384
M+A KY P L+T +GG RAGRRA+ AALE +L++ R++VD+YQ +HFPFPY+GG A+ EGLA E GLC +VGV NFNA Q+ ++ E + + SNQ ++SL++ DGT++ C+RL
Sbjct: 219 MVATKYTPKLFTNLRVGGGLRAGRRAVVAALEQSLERLDRSFVDVYQ-LHFPFPYIGGNRALIEGLAMCKEEGLCDAVGVCNFNARQIEVAYERFEDCGVPLVSNQVKFSLLHPKPLQDGTIKTCRRL 345
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A7S2JAA3_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2JAA3_9EUKA) HSP 1 Score: 118 bits (296), Expect = 1.990e-29 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 1 MIAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRLG 387
+I+ K+MP+ WT L GG R GR+A+ A N++ + G +DLY +H P PYLGG A+ EGLA A + GLCR VGV N+NA Q+R + + + + +NQF YSL N ++E DGTLE C LG
Sbjct: 115 LISTKFMPVPWTHLLAGGGLRFGRQAVVQAARNSIVRLGVGQLDLYS-LHAPIPYLGGRRALFEGLAEAYDLGLCRGVGVCNYNAAQVREAYLECRRLGVPLVANQFRYSLFNVERELDGTLETCLELG 242
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A7S0VV68_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VV68_9CRYP) HSP 1 Score: 115 bits (287), Expect = 6.910e-28 Identity = 58/127 (45.67%), Postives = 82/127 (64.57%), Query Frame = 1
Query: 7 AAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRLG 387
A+K+ P+ WT L+GG R GR+A+ A + ++ GR +DLYQ +HFPFPYLGG DA+ EGLA A + GL +SVGV NF +L AF L + + + SNQ ++SL++R G L+ C+ LG
Sbjct: 158 ASKFFPVPWTNVLVGGGVRIGRQAVVDAARASSERLGRP-IDLYQ-LHFPFPYLGGSDALCEGLAEAADLGLVKSVGVCNFERAELEAFHAALGRLGVPLVSNQVKFSLLDRRVAQSGLLDTCRELG 282
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A7S0H820_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H820_9CRYP) HSP 1 Score: 109 bits (272), Expect = 9.900e-27 Identity = 49/128 (38.28%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 MIAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRL 384
++++K+ P W+ L+GG R GR+A+ A+ ++ + G +DLYQ + FPFPY+GG A+ EG A A E GLC+SVGV NF+ +++ L KH + +ASNQ +++++R + G + CK +
Sbjct: 126 VLSSKFFPAPWSHTLVGGGVRLGRKAVVEAVRGSITRLGCGQIDLYQ-IQFPFPYVGGQQALLEGFAEAVELGLCKSVGVCNFDVNEIQQAHAILAKHGVPLASNQVRFNILDRRVQQSGLMNVCKEM 252
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A7S0LHR0_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHR0_9EUKA) HSP 1 Score: 109 bits (273), Expect = 5.590e-26 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 1 MIAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRLG 387
+I+ K+MP+ W L GG RAGR A+ L N++ + G VD+Y VH P PY+GG A+ EG+A A GLCR+VG+ +FNA+Q R + + +NQ YS+ N ++E DGT+E C LG
Sbjct: 136 IISTKFMPVPWANMLAGGGIRAGRAAVVEGLRNSIARLGVGSVDIYS-VHAPLPYIGGQKALFEGMADAHALGLCRAVGLCDFNAKQTREAHAICRSLGVPLVTNQVRYSMFNLERELDGTIETCLELG 263
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A0G4G9B9_VITBC (Aldo_ket_red domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G9B9_VITBC) HSP 1 Score: 103 bits (257), Expect = 1.700e-23 Identity = 54/129 (41.86%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 4 IAAKYMPILWTKFL-IGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRLG 387
+A K+ P+LWT L +GG +R G A++ A++N+L + + L+Q +HFPFPY+GG A+AEGLA+A G C+ +GVSNF+ ++L ++L K N SNQ SL+++ DG+LE C G
Sbjct: 156 VATKFFPLLWTNALGVGGGFRWGSEAVSRAIDNSLARLDGVPIALFQ-LHFPFPYIGGYPALAEGLAKARLDGKCQHIGVSNFDIKELPQMERELSKWNTPTVSNQIPLSLIDQRYLVDGSLEYCFERG 283
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: A0A3D1JHR2_9CHLR (Aldo/keto reductase n=1 Tax=Anaerolinea thermolimosa TaxID=229919 RepID=A0A3D1JHR2_9CHLR) HSP 1 Score: 97.4 bits (241), Expect = 8.280e-22 Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 1
Query: 4 IAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLG---GMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQFEYSLVNRDKEDDGTLEECKRLG 387
+A K+MP PWR GRR + AL+ +L + G + VDLYQ +H P P + MDAMAE A + GL R+VGVSN++A+Q+R ++L++ I +ASNQ EYSL+NR E +G L C LG
Sbjct: 84 VATKFMPF---------PWRLGRRTLINALKGSLKRLGVSQVDLYQ-IHMPLPPVNIETWMDAMAE----AVQAGLTRAVGVSNYDADQMRRAYERLQRAGIHLASNQVEYSLLNRTVEKNGLLALCNELG 200
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Match: L1JIN9_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JIN9_GUITC) HSP 1 Score: 98.2 bits (243), Expect = 1.010e-21 Identity = 45/106 (42.45%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 1 MIAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHFPFPYLGGMDAMAEGLARACERGLCRSVGVSNFNAEQLRAFSKKLEKHNIAIASNQ 318
++++K+ P W+ L+GG R GR+A+ A+ ++ + G +DLYQ + FPFPYLGG A+ EG A A + GLC+SVGV NF+ +++ L KH + +ASNQ
Sbjct: 126 VLSSKFFPAPWSNTLVGGGVRLGRKAVVEAIRGSITRLGCGQIDLYQ-MQFPFPYLGGQQALLEGFAEAVDFGLCKSVGVCNFDVNEIQEAHAILAKHGVPLASNQ 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26450.7218.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26450.7218.1 >prot_H-paniculata_contig26450.7218.1 ID=prot_H-paniculata_contig26450.7218.1|Name=mRNA_H-paniculata_contig26450.7218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp MIAAKYMPILWTKFLIGGPWRAGRRAIAAALENTLDQTGRTYVDLYQQVHback to top mRNA from alignment at H-paniculata_contig26450:314..2521+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26450.7218.1 ID=mRNA_H-paniculata_contig26450.7218.1|Name=mRNA_H-paniculata_contig26450.7218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2208bp|location=Sequence derived from alignment at H-paniculata_contig26450:314..2521+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26450:314..2521+ >mRNA_H-paniculata_contig26450.7218.1 ID=mRNA_H-paniculata_contig26450.7218.1|Name=mRNA_H-paniculata_contig26450.7218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig26450:314..2521+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |