mRNA_H-paniculata_contig2641.7213.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A6H5JTR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTR6_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 5.240e-17 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 1 QLFIYSPSRRLAAFQSG---------------NSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
+LF+YSP +RLAAF+SG R H VFVPGLTDGLLAL Y+P LA A+ RLG + VQPVLSSSY+G
Sbjct: 40 ELFVYSPKKRLAAFRSGCHGGGSSSSDRQSRQQRHNRKHAVFVPGLTDGLLALDYVPELAAALDRLGFAFVQPVLSSSYQG 120
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A1Y1XTH3_9FUNG (DUF1749-domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XTH3_9FUNG) HSP 1 Score: 67.0 bits (162), Expect = 1.480e-11 Identity = 36/65 (55.38%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 4 LFIYSPSRRLAAFQSGNSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
LF YS + RL F+SG++ G VVF+ GLTDG A+ YLP L + RLG SLVQ +LSSSY G
Sbjct: 7 LFQYSSTSRLVGFESGDASSPGCVVFIAGLTDGFHAVPYLPVLNDTVNRLGYSLVQVLLSSSYHG 71
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A7S4SG09_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SG09_9DINO) HSP 1 Score: 67.4 bits (163), Expect = 1.830e-11 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 1 QLFIYSPSRRLAAFQSGNSVPRGH-VVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
+LF+Y+ LAAF+ G P +V +PGLTDGL+++ YLPALA AM R G +VQPVLSSSY G
Sbjct: 8 ELFLYNDDIGLAAFEVGGRGPGTRALVCIPGLTDGLMSMRYLPALADAMQREGWRVVQPVLSSSYSG 74
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A507BYY6_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BYY6_9FUNG) HSP 1 Score: 65.1 bits (157), Expect = 7.350e-11 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 1 QLFIYSPSRRLAAFQSGNSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSY 192
+LF Y R AF+S +S+P +F+PGLTDGL AL YLP L + +G SL+QP+L SSY
Sbjct: 4 KLFTYDSESRYVAFESNSSLPN-KTIFIPGLTDGLNALPYLPLLTQQLASIGYSLIQPILPSSY 66
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A7S0X3Y9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X3Y9_9CHLO) HSP 1 Score: 63.2 bits (152), Expect = 4.970e-10 Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 1
Query: 1 QLFIYSPSRRLAAFQSG-NSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
+L+ PSR L AF SG + P G VVF+PGL+DG LAL Y+PAL A G +L QPVLSSSY G
Sbjct: 32 RLYRTFPSR-LVAFTSGPDPAPAGTVVFIPGLSDGPLALPYVPALGAAGAARGWALCQPVLSSSYLG 97
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A7I8L864_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L864_SPIIN) HSP 1 Score: 60.1 bits (144), Expect = 6.260e-9 Identity = 34/65 (52.31%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 4 LFIYSPSRRLAAFQSGNSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
LF Y P AF++G+ R V+F+ GLTDGLLA YL +L+VA+ + SLVQP+LSSSY G
Sbjct: 55 LFKYGPKAVQVAFKTGDF--RQQVIFIGGLTDGLLATEYLESLSVALEKERWSLVQPLLSSSYTG 117
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A813JN21_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JN21_POLGL) HSP 1 Score: 59.3 bits (142), Expect = 1.300e-8 Identity = 35/68 (51.47%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 1 QLFIYSPSRRLAAFQ-SGNSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLG-CSLVQPVLSSSYKG 198
+LF++ LAAF+ G + +V +PGLTDGLL+L YLPALA A+ G +VQPVLSSSY G
Sbjct: 103 ELFLWDDDLGLAAFEIGGRGLGSRALVCIPGLTDGLLSLRYLPALAEAVASTGGWRVVQPVLSSSYSG 170
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: UPI0009E2DC82 (UPF0613 protein PB24D3.06c isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E2DC82) HSP 1 Score: 58.9 bits (141), Expect = 1.640e-8 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 4 LFIYSPSRRLAAFQSGNSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
LF Y P AF++G+ V+F+ GLTDGLLA YL L+VA+ L SLVQP+LSSSY G
Sbjct: 61 LFKYGPKSVQVAFRTGDF--NQQVIFLGGLTDGLLATEYLEPLSVALENLNWSLVQPLLSSSYVG 123
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A812YZ55_9DINO (Hypothetical protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812YZ55_9DINO) HSP 1 Score: 58.2 bits (139), Expect = 3.360e-8 Identity = 32/70 (45.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query: 1 QLFIYSPSRRLAAFQS--GNSVPRGH--VVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
++F+Y A F++ G ++P+G VV + GLTDGLL+L YLPALA + ++G QPVL SSY+G
Sbjct: 8 EVFLYDEMLGYAGFEARTGQNLPQGSKAVVCIGGLTDGLLSLRYLPALAAELQQVGWRTFQPVLQSSYRG 77
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Match: A0A4Y7J0N5_PAPSO (Uncharacterized protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J0N5_PAPSO) HSP 1 Score: 57.0 bits (136), Expect = 3.610e-8 Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 1
Query: 4 LFIYSPSRRLAAFQSGNSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRLGCSLVQPVLSSSYKG 198
LF Y P AF++G+ + V+F+ GLTDGLLA Y+ L++A+ + SLVQP+LSSSY G
Sbjct: 58 LFKYGPKSAQVAFKTGDF--KQQVIFIGGLTDGLLATDYVEPLSIALQKEKWSLVQPLLSSSYTG 120 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2641.7213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2641.7213.1 >prot_H-paniculata_contig2641.7213.1 ID=prot_H-paniculata_contig2641.7213.1|Name=mRNA_H-paniculata_contig2641.7213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp QLFIYSPSRRLAAFQSGNSVPRGHVVFVPGLTDGLLALAYLPALAVAMGRback to top mRNA from alignment at H-paniculata_contig2641:20116..20358+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2641.7213.1 ID=mRNA_H-paniculata_contig2641.7213.1|Name=mRNA_H-paniculata_contig2641.7213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=243bp|location=Sequence derived from alignment at H-paniculata_contig2641:20116..20358+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2641:20116..20358+ >mRNA_H-paniculata_contig2641.7213.1 ID=mRNA_H-paniculata_contig2641.7213.1|Name=mRNA_H-paniculata_contig2641.7213.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=420bp|location=Sequence derived from alignment at H-paniculata_contig2641:20116..20358+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |