mRNA_H-paniculata_contig2639.7205.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2639.7205.1
Unique NamemRNA_H-paniculata_contig2639.7205.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: D8LRS4_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS4_ECTSI)

HSP 1 Score: 603 bits (1554), Expect = 2.560e-212
Identity = 309/431 (71.69%), Postives = 357/431 (82.83%), Query Frame = 1 
Query:    1 MDVRLPVGHWGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVGEKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDLNITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLSDIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKRANKKK-KMDPRRGGERSSSPNSLGGFRGTAHRTATLDPGATGNWAPPLPPPGPL 1290
            M VRLP  HWGTR+I+CYEKVEQIGEGTYGQVYKA+NK+T+ IVALKKIRVHSENFGLPVTAIRE+KILNELSH SMV+LLE+VTSVGE+D XXX    +PRTDR RRGSLYIVLEYLEHDLAGLLDLNITFS +Q+K+LL+QLL +L F+H +KYVHRDIKCSNLLIDN L LKLADFGLARRLS++P DLTNRVITLWYRPPELLLGATRYGPSVD WGVGCI AE++IGKPLFP KVELEQLE I +VCGTP++R WP H+ELPSF +MMPK  YP +LK HLTET+R  GT  L+T++ I+LI +LLTLDP+RR SA +AL +  YF T P+CPD I ++ PL LP+  GSYHE+QTKRKRK +GI QQ+AKRA +KK K DPRR GER + P+          R+A    G+ GNWAPPLPP  PL
Sbjct:    1 MTVRLPDNHWGTRSISCYEKVEQIGEGTYGQVYKAKNKVTKDIVALKKIRVHSENFGLPVTAIREMKILNELSHPSMVRLLEIVTSVGEEDDXXXGKD-SPRTDRGRRGSLYIVLEYLEHDLAGLLDLNITFSAVQMKALLRQLLEILAFIHDNKYVHRDIKCSNLLIDNNLQLKLADFGLARRLSEVPADLTNRVITLWYRPPELLLGATRYGPSVDCWGVGCIFAELIIGKPLFPTKVELEQLEAIFKVCGTPDSRRWPAHEELPSFSTMMPKNKYPDQLKQHLTETARTAGTEKLLTSEAIDLISRLLTLDPSRRTSAKQAL-ETRYFGTHPICPDNILEVPPLELPDHGGSYHEYQTKRKRKEEGIMQQDAKRAQRKKDKRDPRRAGERPTPPSPKAASSDQVQRSAKPSTGSRGNWAPPLPPANPL 429
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A835Z4S4_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S4_9STRA)

HSP 1 Score: 362 bits (929), Expect = 3.990e-119
Identity = 191/318 (60.06%), Postives = 232/318 (72.96%), Query Frame = 1 
Query:   31 GTRAINC-YEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVGEKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDLNITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRL-SDIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALK 978
            GTRA +  YEKVEQIGEGTYGQVY+AR++++  +VALKKIRVH+E+ GLP+TAIREIKIL ELSH +MV+LLEVVT                         L++VLEY++HDLAGLLD++  FS   IK ++KQLL VL  +H H+YVHRDIKCSN+L+DN   LKLADFGLARRL  D    L+N+VITLWYRPPELLLGA RYGP VD WGVGCIL+E+++ KPL P KVELEQLE+I +V GTP    WPGH ELP +  M P   YP  LK HL ET+RK+GT   MT + ++LI +L+TLDP RR SA  AL+
Sbjct:    3 GTRAGSVWYEKVEQIGEGTYGQVYRARHRVSGKVVALKKIRVHNEHNGLPLTAIREIKILKELSHPNMVELLEVVT-------------------------LFLVLEYVDHDLAGLLDMHYCFSPQAIKMIIKQLLEVLQHMHEHRYVHRDIKCSNILLDNHHRLKLADFGLARRLCEDQDRQLSNKVITLWYRPPELLLGARRYGPPVDMWGVGCILSELILQKPLLPGKVELEQLEMIFKVVGTPTDSAWPGHAELPLWQEMQPPVFYPNVLKSHLLETARKMGTHSSMTPEAVDLIARLMTLDPQRRMSAKTALE 295
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A022QSY2_ERYGU (Protein kinase domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QSY2_ERYGU)

HSP 1 Score: 327 bits (839), Expect = 8.270e-104
Identity = 183/370 (49.46%), Postives = 246/370 (66.49%), Query Frame = 1 
Query:   28 WGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVGEKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            WG+R+++C+EK+EQIGEGTYGQVY A+ K T  IVALKKIR+ +E  G P+TAIREIKIL +L H ++++L E+VTS G +             D K +GS+Y+V EY++HDL GL D   + F+  QIK  +KQLL+ L + H ++ +HRDIK SNLLIDN  +LKLADFGLAR  S D+  +LTNRVITLWYRPPELL GAT+YGP+VD W VGCI AE++ GKP+ P K ELEQL  I ++CG+P+  IWPG  ++P +    P +    ++K  + E  R      L      +L++++L LDP++R SA  AL  A YF + P+  D      P  LP+   S HEFQTK+KR+    N++ AKR
Sbjct:   16 WGSRSVDCFEKLEQIGEGTYGQVYMAKEKETGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIQLKEIVTSPGRESNEQES-----HDDNKYKGSIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDVNANLTNRVITLWYRPPELLFGATKYGPAVDMWSVGCIFAELLYGKPILPGKNELEQLNKIFELCGSPDELIWPGVSKIPWYNKFKPAR----QMKKRIRELFRHFDRHAL------DLLDKMLVLDPSQRISAKDAL-DAEYFWSDPLPCD------PKTLPKYESS-HEFQTKKKRQQQRQNEEIAKR 362
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A2G9GLG9_9LAMI (Cdc2-related protein kinase n=3 Tax=Lamiales TaxID=4143 RepID=A0A2G9GLG9_9LAMI)

HSP 1 Score: 327 bits (838), Expect = 1.100e-103
Identity = 185/371 (49.87%), Postives = 244/371 (65.77%), Query Frame = 1 
Query:   28 WGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVG-EKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            WG+R+++C+EK+EQIGEGTYGQVY AR   T  IVALKKIR+ +E  G P+TAIREIKIL +L H +++KL E+VTS G EKD              K RG +Y+V EY++HDL GL D   + FS  QIK  ++QLL+ L + H ++ +HRDIK SNLLIDN  +LKLADFGLAR  S D   +LTNRVITLWYRPPELLLG T+YGP+VD W VGCI AE++ GKP+FP K E EQL  I  +CGTP+   WPG  ++P + +  P ++   +L+ H     R            ++L++++LTLDP++R SA  AL  A YF T P+  D      P +LP+   S HEFQTK+KR+    +++  KR
Sbjct:   17 WGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSTGPEKDEQGASDG------NKYRGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELINGKPIFPGKDEPEQLNKIFDICGTPSEENWPGVSKIPWYNNFKPTRIVKRRLREHFRHFDRH----------ALDLLDRMLTLDPSQRISAKDAL-DAEYFWTDPLPCD------PKSLPKYESS-HEFQTKKKRQQQRQHEENTKR 363
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A2G9IAJ3_9LAMI (Cdc2-related protein kinase n=12 Tax=Lamiales TaxID=4143 RepID=A0A2G9IAJ3_9LAMI)

HSP 1 Score: 326 bits (835), Expect = 2.760e-103
Identity = 185/370 (50.00%), Postives = 243/370 (65.68%), Query Frame = 1 
Query:   28 WGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVGEKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            WG+R++ C+EK+EQIGEGTYGQVY AR K T  IVALKKIR+ +E  G P+TAIREIKIL +L H +++KL E+VTS G +               K +GS+Y+V EY++HDL GL D   + F+  QIK  ++QLL+ L + H ++ +HRDIK SNLLIDN  +LKLADFGLAR  S D+  +LTNRVITLWYRPPELLLGAT+YGP+VD W VGCI AE++ GKP+ P K E EQL  I ++CGTP+   WPG  ++P +    P +    ++K  + E  R      L      +L+E++L LDP +R SA  AL  A YF T P+  D      P +LP+   S HEFQTK+KR+    N++ AKR
Sbjct:   16 WGSRSVECFEKLEQIGEGTYGQVYMAREKKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIKLKEIVTSPGREGDEQGNPDGN-----KYKGSIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMRQLLTGLHYCHINQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDVNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLYGKPILPGKNEPEQLNKIFELCGTPDELTWPGVSKIPWYNKFKPAR----QMKKRIRELFRHFDRHAL------DLLEKMLVLDPAQRISAKDAL-DAEYFWTDPLPCD------PKSLPKYESS-HEFQTKKKRQQQRQNEELAKR 362
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A165XQM3_DAUCS (Protein kinase domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165XQM3_DAUCS)

HSP 1 Score: 325 bits (833), Expect = 5.660e-103
Identity = 186/370 (50.27%), Postives = 243/370 (65.68%), Query Frame = 1 
Query:   28 WGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVGEKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            WG+R I+C++K+EQIGEGTYGQVY AR+  T  IVALKKIR+ +E  G P+TAIREIKIL +L H ++++L E+VTS G +          P  D K +G++Y+V EY++HDL GL D   + F+  QIK  +KQLL+ L + H ++ +HRDIK SNLLIDN  +LKLADFGLAR  S D   +LTNRVITLWYRPPELLLGAT+YGP+VD W VGCI AE++ GKP+ P K E EQL  I ++CGTP+   WPG  + P +    P +     +K  + E  R      L      +L+E++LTLDP +R SA  AL  A YF T P+  D      P +LP+   S HEFQTK+KR+    N++ AKR
Sbjct:   18 WGSRNIDCFQKLEQIGEGTYGQVYMARDNKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLQHENVIRLKEIVTSTGPE----ADEQAKPDGDNKYKGNIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLQGKPVLPGKAEPEQLNKIFELCGTPDENNWPGVSKTPWYNKFKPTR----PMKRRVREIFRHFDRHAL------DLLEKMLTLDPAQRISAKDAL-DAEYFWTDPLPCD------PKSLPKYESS-HEFQTKKKRQQQRANEEIAKR 365
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A2K1Y6U0_POPTR (Protein kinase domain-containing protein n=9 Tax=Magnoliopsida TaxID=3398 RepID=A0A2K1Y6U0_POPTR)

HSP 1 Score: 324 bits (830), Expect = 1.790e-102
Identity = 187/372 (50.27%), Postives = 245/372 (65.86%), Query Frame = 1 
Query:   25 HWGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVG-EKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            +WG+R+++C+EK+EQIGEGTYGQVY AR   T  IVALKKIR+ +E  G P+TAIREIKIL +L H +++KL E+VTS G EKD            D K +G +Y+V EY++HDL GL D   I F+  QIK  ++QLL+ L + H ++ +HRDIK SNLLIDN  +LKLADFGLAR  S +  ++LTNRVITLWYRPPELLLG+T+YGP+VD W VGCI AE++ GKP+FP K E EQL  I ++CG P+   WPG  ++P + +  P +     +K  L E  R      L      EL+E++L LDP +R SA  AL  A YF T P      P   P +LP+   S HEFQTK+KR+    +++ AKR
Sbjct:   20 YWGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSQGPEKDDQGKPD------DNKYKGGIYMVFEYMDHDLTGLADRPGIRFTVPQIKCYMRQLLTGLHYCHINQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNEHQSNLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTR----PMKRRLREVFRHFDRHAL------ELLERMLALDPAQRISAKDAL-DAEYFWTDP------PPCDPKSLPKYESS-HEFQTKKKRQQQRQHEENAKR 367
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A022RAQ1_ERYGU (Protein kinase domain-containing protein n=2 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022RAQ1_ERYGU)

HSP 1 Score: 323 bits (827), Expect = 3.060e-102
Identity = 185/372 (49.73%), Postives = 242/372 (65.05%), Query Frame = 1 
Query:   28 WGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVG-EKDXXXXXXXXTPRTD-RKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            WG+R+++C+EK+EQIGEGTYGQVY A+   T  IVALKKIR+ +E  G P+TAIREIKIL +L H +++KL E+VTS G EKD         P  D  K RG +Y+V EY++HDL GL D   + FS  QIK  ++QLL+ L + H ++ +HRDIK SNLLIDN  +LKLADFGLAR  S D   +LTNRVITLWYRPPELLLG T+YGP+VD W VGCI AE++ GKP+FP K E EQ+  I  +CG+    IWPG  +LP + +  P +M   +L+ H     R            ++L++++L LDP+ R +A  AL  A YF T P+  D      P +LP+   S HEFQTK+KR+      + AKR
Sbjct:   17 WGSRSVDCFEKLEQIGEGTYGQVYMAKEIDTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSTGPEKDEQ-------PAPDGNKYRGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLNGKPIFPGKDEAEQIHKIYDICGSATEEIWPGVSKLPWYNNFKPTRMVKRRLREHFRHFDRH----------ALDLLDRMLILDPSHRIAAKDAL-DAEYFWTDPLPCD------PKSLPKYEAS-HEFQTKKKRQQQRQLDENAKR 363
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A2R6RDE9_ACTCC (Cyclin-dependent kinase n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6RDE9_ACTCC)

HSP 1 Score: 323 bits (828), Expect = 3.270e-102
Identity = 186/370 (50.27%), Postives = 243/370 (65.68%), Query Frame = 1 
Query:   28 WGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVGEKDXXXXXXXXTPRTDRKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            WG+R+++C+EK+EQIGEGTYGQVY AR   T  IVALKKIR+ +E  G P+TAIREIKIL +L H +++KL E+VTS G +           + D K  G++Y+V EY++HDL GL D   + F+  QIK  +KQLL+ L + H ++ +HRDIK SNLLIDN   LKLADFGLAR  S D   +LTNRVITLWYRPPELLLGAT+YGP+VD W VGCI AE++ GKP+ P K E EQL  I ++CG+PN   WPG  ++P +    P +    ++  HL E  R      L      +L+E++L LDP++R SA  AL  A YF T P+  D      P +LP+   S HEFQTK+KR+    N++ AKR
Sbjct:   17 WGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEKEGFPITAIREIKILKKLDHENIIKLKEIVTSQGPE------VDEQGKPDSKYNGNIYMVFEYMDHDLTGLADRPGLRFTIPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGTLKLADFGLARSFSGDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLNKIFELCGSPNEINWPGVSKIPWYNKFKPAR----QMNKHLREVFRNFDRHAL------DLLEKMLILDPSQRISAKDAL-DAEYFWTDPLPCD------PKSLPKYESS-HEFQTKKKRQQQRQNEEIAKR 362
[Close]
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Match: A0A6J5VWU5_PRUAR (Protein kinase domain-containing protein n=5 Tax=Pentapetalae TaxID=1437201 RepID=A0A6J5VWU5_PRUAR)

HSP 1 Score: 323 bits (827), Expect = 4.890e-102
Identity = 191/375 (50.93%), Postives = 247/375 (65.87%), Query Frame = 1 
Query:   19 VGHWGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIRVHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVG-EKDXXXXXXXXTPRTD-RKRRGSLYIVLEYLEHDLAGLLDL-NITFSNIQIKSLLKQLLSVLDFVHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLS-DIPTDLTNRVITLWYRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQVCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMTADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLPERNGSYHEFQTKRKRKSDGINQQEAKR 1131
            V  WG+R+++C+EK+EQIGEGTYGQVY AR   T  IVALKKIR+ +E  G P+TAIREIKIL +L H +++ L E+VTS G EKD          R D  K +G +Y+V EY++HDL GL D   + FS  QIK  ++QLL+ L + H ++ +HRDIK SNLLIDN  +LKLADFGLAR  S D   +LTNRVITLWYRPPELLLGAT+YGP+VD W VGCI AE++ GKP+FP K E EQL  I ++CG P+   WPG  ++P + +  P +     +K  L E  R      L      EL+E++LTLDP++R SA  AL  A YF T P+  D      P +LP+   S HEFQTK+KR+    +++ AKR
Sbjct:   14 VPSWGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVINLKEIVTSPGPEKDEQG-------RPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFSVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGATKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVNWPGVSKIPWYNNFKPTR----PMKRRLREVFRHFDRHAL------ELLERMLTLDPSQRISAKDAL-DAEYFWTDPLPCD------PKSLPKYESS-HEFQTKKKRQQQRQHEENAKR 363
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2639.7205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRS4_ECTSI2.560e-21271.69Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835Z4S4_9STRA3.990e-11960.06Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A022QSY2_ERYGU8.270e-10449.46Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A2G9GLG9_9LAMI1.100e-10349.87Cdc2-related protein kinase n=3 Tax=Lamiales TaxID... [more]
A0A2G9IAJ3_9LAMI2.760e-10350.00Cdc2-related protein kinase n=12 Tax=Lamiales TaxI... [more]
A0A165XQM3_DAUCS5.660e-10350.27Protein kinase domain-containing protein n=1 Tax=D... [more]
A0A2K1Y6U0_POPTR1.790e-10250.27Protein kinase domain-containing protein n=9 Tax=M... [more]
A0A022RAQ1_ERYGU3.060e-10249.73Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A2R6RDE9_ACTCC3.270e-10250.27Cyclin-dependent kinase n=3 Tax=Actinidia TaxID=36... [more]
A0A6J5VWU5_PRUAR4.890e-10250.93Protein kinase domain-containing protein n=5 Tax=P... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2639contigH-paniculata_contig2639:3231..10622 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score614.0
Seed ortholog evalue5.6e-173
Seed eggNOG ortholog2880.D8LRS4
Preferred nameCDKC1
KEGG koko:K08819
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cyclin-dependent protein serine/threonine kinase activity
EggNOG OGsKOG0600@1,KOG0600@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_002250.1
EC2.7.11.22,2.7.11.23
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001
Exons11
Model size1359
Cds size1359
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929789.4242485-CDS-H-paniculata_contig2639:3230..33231622929789.4242485-CDS-H-paniculata_contig2639:3230..3323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 3231..3323 +
1691481011.3946183-CDS-H-paniculata_contig2639:3230..33231691481011.3946183-CDS-H-paniculata_contig2639:3230..3323Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 3231..3323 +
1622929789.438057-CDS-H-paniculata_contig2639:5736..58141622929789.438057-CDS-H-paniculata_contig2639:5736..5814Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 5737..5814 +
1691481011.4088044-CDS-H-paniculata_contig2639:5736..58141691481011.4088044-CDS-H-paniculata_contig2639:5736..5814Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 5737..5814 +
1622929789.4512606-CDS-H-paniculata_contig2639:6455..65511622929789.4512606-CDS-H-paniculata_contig2639:6455..6551Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 6456..6551 +
1691481011.4189086-CDS-H-paniculata_contig2639:6455..65511691481011.4189086-CDS-H-paniculata_contig2639:6455..6551Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 6456..6551 +
1622929789.483291-CDS-H-paniculata_contig2639:7286..74111622929789.483291-CDS-H-paniculata_contig2639:7286..7411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 7287..7411 +
1691481011.429618-CDS-H-paniculata_contig2639:7286..74111691481011.429618-CDS-H-paniculata_contig2639:7286..7411Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 7287..7411 +
1622929789.5177522-CDS-H-paniculata_contig2639:7882..80151622929789.5177522-CDS-H-paniculata_contig2639:7882..8015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 7883..8015 +
1691481011.447924-CDS-H-paniculata_contig2639:7882..80151691481011.447924-CDS-H-paniculata_contig2639:7882..8015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 7883..8015 +
1622929789.5528991-CDS-H-paniculata_contig2639:8125..83501622929789.5528991-CDS-H-paniculata_contig2639:8125..8350Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 8126..8350 +
1691481011.459372-CDS-H-paniculata_contig2639:8125..83501691481011.459372-CDS-H-paniculata_contig2639:8125..8350Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 8126..8350 +
1622929789.5642157-CDS-H-paniculata_contig2639:8814..89221622929789.5642157-CDS-H-paniculata_contig2639:8814..8922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 8815..8922 +
1691481011.4696543-CDS-H-paniculata_contig2639:8814..89221691481011.4696543-CDS-H-paniculata_contig2639:8814..8922Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 8815..8922 +
1622929789.5800557-CDS-H-paniculata_contig2639:9680..97911622929789.5800557-CDS-H-paniculata_contig2639:9680..9791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 9681..9791 +
1691481011.4792497-CDS-H-paniculata_contig2639:9680..97911691481011.4792497-CDS-H-paniculata_contig2639:9680..9791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 9681..9791 +
1622929789.5909374-CDS-H-paniculata_contig2639:9992..101721622929789.5909374-CDS-H-paniculata_contig2639:9992..10172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 9993..10172 +
1691481011.4892619-CDS-H-paniculata_contig2639:9992..101721691481011.4892619-CDS-H-paniculata_contig2639:9992..10172Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 9993..10172 +
1622929789.6037972-CDS-H-paniculata_contig2639:10334..104221622929789.6037972-CDS-H-paniculata_contig2639:10334..10422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 10335..10422 +
1691481011.5001357-CDS-H-paniculata_contig2639:10334..104221691481011.5001357-CDS-H-paniculata_contig2639:10334..10422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 10335..10422 +
1622929789.6169696-CDS-H-paniculata_contig2639:10500..106221622929789.6169696-CDS-H-paniculata_contig2639:10500..10622Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 10501..10622 +
1691481011.508174-CDS-H-paniculata_contig2639:10500..106221691481011.508174-CDS-H-paniculata_contig2639:10500..10622Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2639 10501..10622 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2639.7205.1prot_H-paniculata_contig2639.7205.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2639 3231..10622 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2639.7205.1

>prot_H-paniculata_contig2639.7205.1 ID=prot_H-paniculata_contig2639.7205.1|Name=mRNA_H-paniculata_contig2639.7205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=453bp
MDVRLPVGHWGTRAINCYEKVEQIGEGTYGQVYKARNKITQGIVALKKIR
VHSENFGLPVTAIREIKILNELSHCSMVKLLEVVTSVGEKDDDDDDDKDT
PRTDRKRRGSLYIVLEYLEHDLAGLLDLNITFSNIQIKSLLKQLLSVLDF
VHAHKYVHRDIKCSNLLIDNRLHLKLADFGLARRLSDIPTDLTNRVITLW
YRPPELLLGATRYGPSVDSWGVGCILAEIMIGKPLFPAKVELEQLELIVQ
VCGTPNARIWPGHDELPSFGSMMPKKMYPCKLKHHLTETSRKIGTGHLMT
ADVIELIEQLLTLDPTRRWSANKALKQASYFRTAPVCPDGIPDLGPLNLP
ERNGSYHEFQTKRKRKSDGINQQEAKRANKKKKMDPRRGGERSSSPNSLG
GFRGTAHRTATLDPGATGNWAPPLPPPGPLAPPPPPRPQLETSTAAPPLP
PNA
back to top

mRNA from alignment at H-paniculata_contig2639:3231..10622+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2639.7205.1 ID=mRNA_H-paniculata_contig2639.7205.1|Name=mRNA_H-paniculata_contig2639.7205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7392bp|location=Sequence derived from alignment at H-paniculata_contig2639:3231..10622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGTCCGACTGCCTGTTGGGCACTGGGGAACGCGGGCCATAAACTG
CTATGAAAAAGTAGAGCAAATCGGAGAAGGCACCTATGGGCAGGTACTGT
AAACTATATTCACTCCGCTGTAAATTGAAGGCTGCTGCTGCGCTTTGTAC
TACATATGATGAATATCTGTGTGTCTGCATTACAGCGTTGAATTTACCGT
AACATTATGCGAAGTTGTTACAGACTACGATACTTGCACCCTTTGTAGTT
CGATATCACCTTTCTGGCAGCACCTTTATGACCATGGTAGTAGAATATCC
CACAAATGCAGCGGATTCCTGTGCTCGTACATGCTACCATCCTCTACGCT
CTCTCCATCTACTCATACTTCCTCTTTCATCAGTATACTTAATGATGATG
ATAGAGGCAGGTAAAACATCTCCGATTTAAAAAAAATGGAATTCCACATG
TTTTTTGGGTTGAAAGCCAATTTTTTGGGTCAAACAAAAGATTTTGAGTA
CTAGAATACTTGCCGTGAAAAAAGTACTCGGGCGAAAAAAACACCTTTTA
GGGAGTTTTGGCATTGTCCCACAAGTACAGTATGTCGTGATTAGAGACGC
ACTTCAAACTTTCTCTGATTATATATTTTTTCAACCTAGAATCCTACATG
TTTTTGAGGTTGAACCCCAAAATGTTGAGTCAAATAGTCAACTTTTAGGC
CATTTCTTGTGGGGTCGAAACATTTCAATCGAAAGCGAAAAATATCTATT
TTTTCGATTGGTAATTTTATGGGTTCGAAGAACTTGTTTTTTCGATTGAA
TTTTTCGGTGTGGGGGATCGATTGGTCACCCAGTCGAAGAATTGGCGTTT
TTTTTATTGCCCTCACACAATTAATCCCTCGAAGAAATGAGACTTCCAAG
AGGTATATCCCACAGTTGATGTTTTATAGCCGACAGTAAACACCGGCATT
GGTCGTAGATACCACCACGTTGGACACACATAATTCAAGGTGTGAGCCCG
GCCGCCCTATGGACCTACACGAGTGGCAGTTGTTGGTAATGGCGGTGCTT
TACTGCTATAGTGGCGGTTGATGACGCTGGGCGCGAAGACGGTGATGATC
AATGCTGTTTTTCATCCAAACTTTGAAATGTCATAGCCTATAACAATACA
CAACCACGAGGATACAGACAAGCCAAGGTGTGTGACCCCCGTCGCTATGT
AGAACTTGCGGGACTGCTAGCCCGGGGATTCACTCCACCCAGCGGAGGAA
GATCTTAAACGCGATCTTGTCGTACAATTCAACCGCGGCCTTTTTCCTGT
TGGTCTGAGACATGATCCCACCGTTCTGCTTCACACCAGTACAAGCATAC
CACAGTAGTATGGTGCACTCTGCAGTATTATCCACTGTGCCTTGCTGATA
GCCGATTGGATCCCCTGACCTTTCATCTCACTCCACACCCATTCCACGCA
TGGGTTCGTCGTAAGATGCATCGCAGTTGACGGTACACTCATGATCGTGT
GCCTTTTAAATGGTGATGTGAGTGTGTGCTGGCGGGTCTGCTGGAGGGTG
GCGTGTACGAGGGTGATGTCTTGGGTGGTCTGCTCGAGGACCCAACGTTG
GAGGGTGTTTAATTTTGGATTTATGCCGTTTGTACTACTACGCCTGCAAA
CCTCCACCAAAAAACACCTGCGGGGAATCCGACCCTTAATTTTTTTCGAA
CCAACAAGATGAGCGATCGATTTTCTTGGACGTTTTTCTTTCCATTCTTA
AGAATGGAAATTTTACGTTTTCGATTGAATTTTTTTCGACCCCACAAGAA
ACGGCCTTAACAGCAAAACCCACGCCGTGCAAAAAGCACACTCGGCCGAA
AAACGCCAAAGTGCTCGGCTGTTTTTGAGTGCTATGGGGAAAAGTCTCAA
GAAAAGGCCTTTTCTCGGCTGAGCACTTTTTTTCATGGTACATGTTTTGG
TGTCAAAAGTCACTTGTTGACCCAAAAAATTGCGTCTCGACCCAAAAAAC
GTGTAGAATTCCATGAACAAAAATTCAAAATAATTCGTAGACGTTCAACT
ACCTCTATAGTCATAACTAAACGTACTTATGAGCAGAGGAAGTATCACCC
AAATACTTTTCAGTCTTATTTTATCCTCGTATCCGTTTCTAGTAAGTGGT
CAAGGTCCGTAATTTACCCAAAACGAATCGATGCGCTCGTAGATGGCTCG
TTAGGCTCGTAAGTATGTAGGAATACTGCTCATAAGCTTCTTCGTTTGAA
AGTCACTCAAGTACAGGTTTGGAAAACTGTTCTGATACGACTTCCAGCAT
TACGCAAGCCAAGGATCGACGTGGGTACCTGTGGCCCTAATCCATTCATG
GTTGGAGCTATTGATACATACTTGATCCACGTCTACCATAGCTCGTGCAG
CAAAAATCCTTATCGTATGAGTGGCGCGCTTGGGATCATGATCTAATAGA
GGTGCTTTTCATGAACCACATGCAAATGGTAAATCGACCGTTACATCCGT
GAACAGGTGTACAAGGCAAGGAATAAGATTACGCAAGGTATCGTTGCTCT
CAAAAAGATACGAGTGCACAGCGAAAACTTCGGGGTAAGTGAGTCTCTTT
TTCTGTATATTACTGTTCTACTATTGTAAGTCATCAGCGTTGTTCGGCTG
TTGTTTTTACTGACTTTTCGATCCCTCGTATGTAGTGTAGTGTAGTATGC
TGTACTAGTACAGTTGTACAGTTGTGCGGTTGTTTCGTGTTCAATGTAAA
GCTTGCGACTGATGTATAGCGGATATGTTTGCCGCTAGTTACAAGTAGAC
AAGTTTTTTGCTATTTTCGGCTGTTGAGTTGATGTGCAGCTATGGTACGA
GTTTGCGCTTGCAGGTTTTCGTCCGTATTAGACAGCAGAACACAGATCAC
CCACACACATGCCGTGGAAACCCCGACCGCCTTTCCTCATAACCAGCATG
ACCTTGTCAACTTGCACCGTTCGTGATCCCAAGTGGGACACTTGACACAG
AAATGCCCACTAAGACCGAGGTGCTGTGTAGCCCAAAGCGTCCACGAGTA
TCGCTGGCTGTTGTATCACCGGTTTTAGAGTGCTTCGTGAGGCGTTTCCT
CAGAGGGGATGACAAGGGTAATCTTTGGCTTGTATTTGGGACTACAGAAC
CATCTTGGTATTTACGTCGATATTATGTGCCTTCTCATGTTCCCTGCCTG
GATCCTGTGTTATTGCCATTACCAGCTCCCGGTCACGGCGATTCGAGAAA
TCAAGATTTTAAACGAGCTTTCCCACTGTAGCATGGTCAAGCTCCTGGAG
GTCGTCACCTCTGTAGGCGAGGTGAGCAACTAGAATAGCAAGCAGACAAC
CTGGCCATGGAGTGAGTCACCGATGAGCTCGAGATTATCCCATGCCATGA
CGGACTGGAAGTACATCAGCAGCGGATATTAAGAGGTTTTACACACAAGC
GGTCACTTGAAACCGAGAGAAATCGATCCCATGGCAGAGGGACAAACGAC
CAAAGCAGGAGGATGAGCAGGCGCCATACGAGCCATGCGAGTAACCTCAA
TGTCGAGCGTCGTAGTAGTTCCATGTGGTGAGGTTACTCGATACCCATGC
TAGGCGAATATAAAAACAAGTAAAGCCAGAGTTTAAGGATGGACGGAAAC
CACCGACGAAACAACGAAGGCAGGGCTCGACCTTACTCTACTATACATGA
AAAACATGTGTCGCGATTGTGAACGTACACATTCAGTGTTGATGTCTGCT
TTATCAGTAGTCTAGAGGGCAGCACTGATAGCAACCTCCGGCATAGCAGT
TGTTACTTATTTTCACTTGGACTCTAATGGACTCGTCTATCACCATAGCC
CGCGTACGCAGCGTCCTTGACGCACGTCAAACGCTACGTTTTACAAGAAA
TTGTTCTGCTTGGGTAAGATTGACGTACTTCCCCAGTATAATGGACGGTG
CATCACATGCCGCATCTGGTAGACGGCTTCTCGTCTCTCCGTGTACTCGC
CGTCGTGGTTGTCGCTGAGCGCGCCTGTGTTTCCGGTTGTGCCTGTTTGG
ATCCAGAAAGATGACGACGACGATGATGACAAGGACACACCCCGAACCGA
TAGGAAGCGAAGGGGTAGTCTCTACATTGTGCTGGAATATCTGGAGCACG
ATCTTGCAGGCTTGTTGGATCTCAACATCACGTGAGTCTTCTCAGCGTGG
GCTCTACTTGAGCTTGTCGAAACTAATAACCGGCTCAGTCCACGTGATCT
GATGCGCCTCCTCAGCTTGCGGTTGGGAAATTATTATTGCATTTGGAGCC
TCCCCCTTCACCACTTTTTTCTGCCTGCATGCGGACCAAAATGTGTCTAC
CAGCTTCAGACAGCAACACCCACGTTGTTCGGTGAAGCTGTGAACCCAGC
AGGAGTAGACCTTTGTGAGAATTATCGAGGTCAGGTTGGCATTGCAGTCT
GCTTCACTGTTCTTGCGAATACCAATGCTTGTTTGCTTTTTTTCATTTGA
CCCGCCGCTCTTTCTTCACGCGCACCAGGAATAGGTTATATTGTCATGTC
ACTTTTGTTTGCGGCTTTACAGCAAAGAGGCTGCTGCATGCTGTGATTAG
ATCTATCTTTTGACGTTGCTGCTCTATCCCTCTCGCTTCGGTGCATGATC
AGGTTCTCCAATATCCAGATTAAGAGTCTCCTCAAGCAGCTGCTGAGTGT
TCTTGATTTCGTACACGCACACAAGTATGTTCACCGTGACATCAAGTGCT
CCAACCTGCTGATCGATAACAGGCTCCATCTGAAGGTTTGTGATATGGGT
ATGGTTTGTGTGTGAACTAAGTCCCAGTTTTGCCCTCATCAAGTTTACAT
TCGACGAAGCCAACGTTTGCCCCTCCCTCAAACCCCGCCGCACAGCTCGC
GGATTTTGGCCTCGCACGGCGGCTGAGTGATATCCCGACTGATCTTACCA
ACCGCGTTATTACGTTGTGGTACCGTCCACCGGAACTTCTGCTCGGTGCC
ACTCGGTATGGACCGAGTGTGGATTCCTGGGGTGTGGGCTGCATATTGGC
CGAAATAATGATTGGCAAACCGCTTTTCCCCGCTAAGGTCGAGTTGGAGC
AGCTGGAGCTCATTGTTCAGGTGAGCCAAAATCCATAGCTCCACTCCGTT
TATACTCATCATGATTTCGCACTACCTGCCTGCTCGTGAGACAACAATGT
CACCTAATTCCCTGTTCTTGAGCTGGTACGCAGTTAATTGATCGAATACA
ACAATCGTTGATGATACAGTGTCGAGGACAGAGGCAACAGTGCTGCACAG
AGCGACATCCGTTGTTGCCACCAATTTGTTGTGTACCTTCACTCTACGTG
CTGCAGATCTGCAGTACCACACGCTCTGTTTTCGGTGTTCGACCTTGGCG
CGCAGGTTGCGACGTGCATTCATTATACGTCTTCTTGAACAAGCCTTTGT
CGGCTCATGTTGTAGAGGGCTTCTGCATTTGTCAGATATGATTGGATTTG
CATTTTGTTATGATTAATTCTTGGCCACTGCTGCCCTGCGACCTCTCTTC
CAACCTCTTGATATCCGGGCATCCCGCCGTCCAGGTGTGTGGCACACCTA
ACGCCAGAATATGGCCCGGCCACGATGAGCTTCCGAGCTTTGGTTCCATG
ATGCCGAAGAAAATGTATCCGTGCAAGTTAAAACATCACCTGGTGAGTAG
CCTTTTTCCAGAATGAGTTAACAATTTGAGGTATCTGGCACGCCCAGACA
AATAAAGCAAAATGTTACTACACCTTGCCTTTACCTTTTGTATAAGTGAT
CAATTTACTTGCCCCACAACGTCAAGCACGGGTCTGTCCTGATTCGAGTC
TGTACCAACATGGTGCTATACCGTATTTTGTTCTTCACAACTGAAGGATC
ACGGAAGATTGATCGCAGGTTGAGATTACTGAAATTGTTGCAGAGTGGAG
GCACCCCTCATCTTCCCGCGGCTGTTGTGCCGCCGGACGCAGAAAGGAGG
TTTCATCTACACGAACCAATCATTGCTCTTTCCAGTGCGGACGAAATAAC
CTACATACAGTACTCGACATCACACCACTCCAGATATGCGTAATTTAAGA
AACCCAGGTTCAATGTTTCGAATTAAGCAAGAAATATGCTCTAGAACCGC
TTACGTATAAGGTACCTGAGTAAGAAATCGGAAGCGTAGCAGTGTACGGT
ACAGCCTCATCGAGAACACGCAGATGGTGTCGAGTACCATAAGTTGCCTC
TAATGCCATTTTCCAGCACATAGCGCCATATTGCTGAAGAAACATGCCCC
AAGAGCAGATCCCAGAAAACACATTTCGAGGTTTGAGCCTCCCAAGCGTT
AATGCAGAATCATTGTGGCCAATTGAAACTTGGAGCTAACTTGATACGCC
AGCAACTCAGTCCCGACCATGTCTCTATTCTTCAACCTATTCGCCTGCAG
ACTGAAACTTCACGAAAGATTGGGACTGGGCACCTTATGACTGCTGACGT
AATCGAGCTCATTGAGCAGCTTTTGACGCTCGACCCAACGAGAAGGTGGT
CCGCTAATAAGGTATGATGTGCTTACACATATCCTTCGTTTACAGAATTC
GACGTGGAACAGCATATTCCCCGCTTCATTACCGCTATGGTGGCATATTC
GGTTATGCTAGATCCCTGCGCTGCAATGTAACACCGATCGAGCCTTGTTT
TTTCGCTCGCAGTTGGTCACTACGCCGTGCGCTGTATTTCATTTTGTATC
GCTGTCCGCCAGGCGCTGAAACAAGCCAGCTATTTCAGGACAGCACCGGT
TTGCCCGGACGGGATTCCCGATCTGGGTCCTCTCAACCTCCCAGAGCGCA
ATGGGTCGTACCACGAGTTTCAGACGAAAAGGAAGCGAAAATCAGATGGC
ATAAACCAGCAGGAGGCCAAGCGCGCCAACAAGAAGAAAAAGGTAGGTGG
TGACATTTCAACTAACGCTTAAGCTATTCCCTGCCGTTATTGAAACGACA
CCATACACGGATGCTCAATGGCTCACATTTGTTTCTCGGCCCGGGTCGGC
CATACCCAGGGTAAAGTCAACGGCGTGGCCAACGGGGAAAATTCGGGGTC
GAAGATGGACCCTCGACGTGGAGGGGAGCGGTCATCTTCCCCTAATTCTT
TGGGTGGGTTTCGCGGCACGGCACATCGAACTGCTACGCTTGGTAATGGA
ATTGCTGCATCCTCGCAGCCACCGCCTCCCCCGCCTGTGCCCCCACATCA
CTCCTACCAGGGGCGCCAAGACCCTGGGGCAACCGGAAATTGGGCCCCCC
CACTTCCACCACCCGGTCCTCTGGCCCCTCCACCACCACCTCGACCACAG
CTCGAGACATCAACTGCAGCTCCACCTTTGCCACCGAACGCA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2639:3231..10622+

>mRNA_H-paniculata_contig2639.7205.1 ID=mRNA_H-paniculata_contig2639.7205.1|Name=mRNA_H-paniculata_contig2639.7205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2718bp|location=Sequence derived from alignment at H-paniculata_contig2639:3231..10622+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACGTCCGACTGCCTGTTGGGCACTGGGGAACGCGGGCCATAAACTG
CTATGAAAAAGTAGAGCAAATCGGAGAAGGCACCTATGGGCAGATGGACG
TCCGACTGCCTGTTGGGCACTGGGGAACGCGGGCCATAAACTGCTATGAA
AAAGTAGAGCAAATCGGAGAAGGCACCTATGGGCAGGTGTACAAGGCAAG
GAATAAGATTACGCAAGGTATCGTTGCTCTCAAAAAGATACGAGTGCACA
GCGAAAACTTCGGGGTGTACAAGGCAAGGAATAAGATTACGCAAGGTATC
GTTGCTCTCAAAAAGATACGAGTGCACAGCGAAAACTTCGGGCTCCCGGT
CACGGCGATTCGAGAAATCAAGATTTTAAACGAGCTTTCCCACTGTAGCA
TGGTCAAGCTCCTGGAGGTCGTCACCTCTGTAGGCGAGCTCCCGGTCACG
GCGATTCGAGAAATCAAGATTTTAAACGAGCTTTCCCACTGTAGCATGGT
CAAGCTCCTGGAGGTCGTCACCTCTGTAGGCGAGAAAGATGACGACGACG
ATGATGACAAGGACACACCCCGAACCGATAGGAAGCGAAGGGGTAGTCTC
TACATTGTGCTGGAATATCTGGAGCACGATCTTGCAGGCTTGTTGGATCT
CAACATCACAAAGATGACGACGACGATGATGACAAGGACACACCCCGAAC
CGATAGGAAGCGAAGGGGTAGTCTCTACATTGTGCTGGAATATCTGGAGC
ACGATCTTGCAGGCTTGTTGGATCTCAACATCACGTTCTCCAATATCCAG
ATTAAGAGTCTCCTCAAGCAGCTGCTGAGTGTTCTTGATTTCGTACACGC
ACACAAGTATGTTCACCGTGACATCAAGTGCTCCAACCTGCTGATCGATA
ACAGGCTCCATCTGAAGGTTCTCCAATATCCAGATTAAGAGTCTCCTCAA
GCAGCTGCTGAGTGTTCTTGATTTCGTACACGCACACAAGTATGTTCACC
GTGACATCAAGTGCTCCAACCTGCTGATCGATAACAGGCTCCATCTGAAG
CTCGCGGATTTTGGCCTCGCACGGCGGCTGAGTGATATCCCGACTGATCT
TACCAACCGCGTTATTACGTTGTGGTACCGTCCACCGGAACTTCTGCTCG
GTGCCACTCGGTATGGACCGAGTGTGGATTCCTGGGGTGTGGGCTGCATA
TTGGCCGAAATAATGATTGGCAAACCGCTTTTCCCCGCTAAGGTCGAGTT
GGAGCAGCTGGAGCTCATTGTTCAGCTCGCGGATTTTGGCCTCGCACGGC
GGCTGAGTGATATCCCGACTGATCTTACCAACCGCGTTATTACGTTGTGG
TACCGTCCACCGGAACTTCTGCTCGGTGCCACTCGGTATGGACCGAGTGT
GGATTCCTGGGGTGTGGGCTGCATATTGGCCGAAATAATGATTGGCAAAC
CGCTTTTCCCCGCTAAGGTCGAGTTGGAGCAGCTGGAGCTCATTGTTCAG
GTGTGTGGCACACCTAACGCCAGAATATGGCCCGGCCACGATGAGCTTCC
GAGCTTTGGTTCCATGATGCCGAAGAAAATGTATCCGTGCAAGTTAAAAC
ATCACCTGGTGTGTGGCACACCTAACGCCAGAATATGGCCCGGCCACGAT
GAGCTTCCGAGCTTTGGTTCCATGATGCCGAAGAAAATGTATCCGTGCAA
GTTAAAACATCACCTGACTGAAACTTCACGAAAGATTGGGACTGGGCACC
TTATGACTGCTGACGTAATCGAGCTCATTGAGCAGCTTTTGACGCTCGAC
CCAACGAGAAGGTGGTCCGCTAATAAGACTGAAACTTCACGAAAGATTGG
GACTGGGCACCTTATGACTGCTGACGTAATCGAGCTCATTGAGCAGCTTT
TGACGCTCGACCCAACGAGAAGGTGGTCCGCTAATAAGGCGCTGAAACAA
GCCAGCTATTTCAGGACAGCACCGGTTTGCCCGGACGGGATTCCCGATCT
GGGTCCTCTCAACCTCCCAGAGCGCAATGGGTCGTACCACGAGTTTCAGA
CGAAAAGGAAGCGAAAATCAGATGGCATAAACCAGCAGGAGGCCAAGCGC
GCCAACAAGAAGAAAAAGGCGCTGAAACAAGCCAGCTATTTCAGGACAGC
ACCGGTTTGCCCGGACGGGATTCCCGATCTGGGTCCTCTCAACCTCCCAG
AGCGCAATGGGTCGTACCACGAGTTTCAGACGAAAAGGAAGCGAAAATCA
GATGGCATAAACCAGCAGGAGGCCAAGCGCGCCAACAAGAAGAAAAAGAT
GGACCCTCGACGTGGAGGGGAGCGGTCATCTTCCCCTAATTCTTTGGGTG
GGTTTCGCGGCACGGCACATCGAACTGCTACGCTTGATGGACCCTCGACG
TGGAGGGGAGCGGTCATCTTCCCCTAATTCTTTGGGTGGGTTTCGCGGCA
CGGCACATCGAACTGCTACGCTTGACCCTGGGGCAACCGGAAATTGGGCC
CCCCCACTTCCACCACCCGGTCCTCTGGCCCCTCCACCACCACCTCGACC
ACAGCTCGAGACATCAACTGCAGCTCCACCTTTGCCACCGAACGCAACCC
TGGGGCAACCGGAAATTGGGCCCCCCCACTTCCACCACCCGGTCCTCTGG
CCCCTCCACCACCACCTCGACCACAGCTCGAGACATCAACTGCAGCTCCA
CCTTTGCCACCGAACGCA
back to top