mRNA_H-paniculata_contig26332.7192.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A6H5L4K4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4K4_9PHAE) HSP 1 Score: 144 bits (362), Expect = 1.830e-39 Identity = 70/97 (72.16%), Postives = 80/97 (82.47%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKMNPSG 291
+G ES +F+S YP HV ILS TSATGQLFIF+TIKKFGPIIFTIIMTTRQM+SLV+SA++F H LG+GCWVGA +VFGTIGYRIRRKM G
Sbjct: 296 NGGFAESFRFMSTYPAAFFHVVILSVTSATGQLFIFYTIKKFGPIIFTIIMTTRQMVSLVLSAVMFGHLLGLGCWVGAFVVFGTIGYRIRRKMQSRG 392
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A6S9KLE1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KLE1_HETAK) HSP 1 Score: 118 bits (295), Expect = 1.560e-29 Identity = 57/92 (61.96%), Postives = 75/92 (81.52%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRK 276
+GE ++L F++ PE V+HV +LS TS TGQLFIF+TIKKFGP+IFTIIMTTRQMLS+V+S +F H+LG+ GA++VF T+GYRIRR+
Sbjct: 307 TGEFFQTLTFMADNPEAVSHVLVLSITSCTGQLFIFYTIKKFGPVIFTIIMTTRQMLSMVLSCFLFGHALGLLAVAGAIVVFATLGYRIRRQ 398
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: F0YSJ6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YSJ6_AURAN) HSP 1 Score: 114 bits (284), Expect = 2.950e-29 Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKMNPSGR 294
+GE+ ESL FL+ + +V LSFTSATGQLFIF+TIKKFGPI+FTI+MTTRQMLSL +S +VF HSLG G +G +VFG + YR +RK + R
Sbjct: 140 TGEMGESLAFLATNEAALVNVLTLSFTSATGQLFIFYTIKKFGPIVFTIMMTTRQMLSLTVSCLVFGHSLGPGAVLGTGVVFGVLFYRTKRKYDAVSR 237
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A7S2WFB0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFB0_9STRA) HSP 1 Score: 114 bits (284), Expect = 3.430e-28 Identity = 55/93 (59.14%), Postives = 73/93 (78.49%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKM 279
SGEL +FLS +P+ + + I + TSATGQLFIF+TIK+FGP++FTIIMTTRQM+S++IS ++F HSL G +VGA +VFG + YRIRRK
Sbjct: 263 SGELMAVTEFLSYHPQALWYNIITAITSATGQLFIFYTIKQFGPVVFTIIMTTRQMISMIISTLLFGHSLSSGSYVGAFLVFGAVFYRIRRKQ 355
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A836CQP3_9STRA (Solute carrier family 35, member B1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQP3_9STRA) HSP 1 Score: 113 bits (283), Expect = 5.010e-28 Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKMNPSGR 294
SGEL S+ F+ +P + H+A LS TSATGQLFIF+TIK FGPIIFTIIMT RQM SLVIS + F H LG+ +G +VFGT+GYRI+RK + R
Sbjct: 274 SGELFSSIAFVMDHPVALKHLATLSITSATGQLFIFYTIKNFGPIIFTIIMTCRQMFSLVISTLWFGHVLGLLSLLGTTVVFGTLGYRIKRKYDGRAR 371
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A8J2SJ07_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJ07_9STRA) HSP 1 Score: 112 bits (280), Expect = 9.070e-28 Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKMNPS 288
+GE+ SL FL+A P + +V LS TSATGQLFIF+TIKKFGPI+FTI+MTTRQMLSL +S +VF H LG G +G +VFG + YR +RK + +
Sbjct: 245 TGEMGLSLAFLAANPAALANVLTLSLTSATGQLFIFYTIKKFGPIVFTIMMTTRQMLSLTVSCVVFGHKLGGGAVLGTCVVFGVLFYRTKRKYDAA 340
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A7S2V172_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V172_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.770e-27 Identity = 59/96 (61.46%), Postives = 73/96 (76.04%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKMNPS 288
+GE +SL+FL PE + ++ LS SATGQLFI++TIKKFGPI+FTIIMTTRQMLS+VIS IV+ H + + GALIVF TIGYRIRR+ N
Sbjct: 284 TGEGIKSLRFLGRNPEALVNILTLSVCSATGQLFIYYTIKKFGPIVFTIIMTTRQMLSMVISCIVYDHPMSLPSVFGALIVFTTIGYRIRRQYNAK 379
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A812Z441_SYMMI (Slc35b2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z441_SYMMI) HSP 1 Score: 104 bits (259), Expect = 6.730e-27 Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKMNPSGR 294
SGE+ +FL P + + + + TSATGQ FIF+TIK+FGPI+FT+IMTTRQMLS+V+S++ F H + + ++GA +VFG + Y +RR+MN G+
Sbjct: 19 SGEIFTVTEFLLVNPTALLYNIVTAITSATGQFFIFYTIKEFGPIVFTVIMTTRQMLSMVLSSVFFGHKMSIYSYLGATLVFGAVFYSVRRQMNKHGK 116
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A7S2HMN6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HMN6_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.290e-25 Identity = 51/98 (52.04%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 1 SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRKMNPSGR 294
SGE+ +L+F++ +P+C+ H+ I S TSATGQLFIF+TI KFGP++ TIIM TRQM+S++IS I+F H + +G + GA IVFG I Y +K + R
Sbjct: 241 SGEMWIALEFITYHPKCLAHIFINSVTSATGQLFIFYTILKFGPVVLTIIMNTRQMISMIISCIIFQHPVSLGSYCGASIVFGVISYGSYQKYKAAPR 338
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Match: A0A7S2MHE4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MHE4_9STRA) HSP 1 Score: 100 bits (250), Expect = 6.300e-25 Identity = 49/91 (53.85%), Postives = 66/91 (72.53%), Query Frame = 1
Query: 4 GELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIMTTRQMLSLVISAIVFAHSLGVGCWVGALIVFGTIGYRIRRK 276
++ +QFL P + + I + TSA+GQ+FIF+TIK FGP++FTIIMTTRQM+S+VIS I+F H L + GAL+VFG + YRIRRK
Sbjct: 62 NDMPAVIQFLIQNPNSLVYNIITAVTSASGQMFIFYTIKSFGPVVFTIIMTTRQMISMVISTILFGHQLAAASFAGALVVFGAVFYRIRRK 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26332.7192.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26332.7192.1 >prot_H-paniculata_contig26332.7192.1 ID=prot_H-paniculata_contig26332.7192.1|Name=mRNA_H-paniculata_contig26332.7192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=100bp SGELQESLQFLSAYPECVTHVAILSFTSATGQLFIFFTIKKFGPIIFTIIback to top mRNA from alignment at H-paniculata_contig26332:2281..3370- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26332.7192.1 ID=mRNA_H-paniculata_contig26332.7192.1|Name=mRNA_H-paniculata_contig26332.7192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1090bp|location=Sequence derived from alignment at H-paniculata_contig26332:2281..3370- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26332:2281..3370- >mRNA_H-paniculata_contig26332.7192.1 ID=mRNA_H-paniculata_contig26332.7192.1|Name=mRNA_H-paniculata_contig26332.7192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=600bp|location=Sequence derived from alignment at H-paniculata_contig26332:2281..3370- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |