mRNA_H-paniculata_contig2633.7191.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: D7FXM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXM9_ECTSI) HSP 1 Score: 311 bits (797), Expect = 1.250e-104 Identity = 154/224 (68.75%), Postives = 182/224 (81.25%), Query Frame = 1
Query: 1 MPSSGFGPFFEIFSEGVVLTVAIITTVSFAERCMKKSAPLNITGFLASIIAVFYSVYGLTYWFNGM-EGYNCTALAAVNGTCMSASNALTFLHLFVKANASNRRNRRWRKGFVWVGVATTVINWVTLIVVHALLVGNEVDGIDGTRCSFTFEMTSFKLKWLGQFVNQAFQVVAFVWPLVEHMRRM-NNGAQKARTNPVFKSLVFPLAVLDNAVNLGAIFFAINI 666
MPS FG FFEIFSEGVV TVA+IT+V F ERC K+SAPLNITG AS+IAV YSV+ L YWFNG+ + Y+C LAAVNGTCMSASNA TFLHLFVKA+ASN+RN +WRK + WVGVATT NWVTL VVHALL G E+DG+DG RC FTFEM SF+LKW+ QF+NQAFQV AFV PL+ H+R M + A+ + + VF +LVFPLAVLDNAV+LGAI FA+++
Sbjct: 1 MPSPAFGLFFEIFSEGVVFTVALITSVCFGERCWKRSAPLNITGLAASLIAVSYSVFALEYWFNGLGDLYDCATLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLQGTEIDGLDGPRCKFTFEMNSFRLKWIAQFINQAFQVAAFVGPLIVHLRMMARSPAKSSEVDTVFATLVFPLAVLDNAVSLGAIIFAVHL 224
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: A0A6H5L5W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5W9_9PHAE) HSP 1 Score: 203 bits (516), Expect = 2.150e-62 Identity = 107/194 (55.15%), Postives = 128/194 (65.98%), Query Frame = 1
Query: 205 YNCTALAAVNGTCMSASNALTFLHLFVKANASNRRNRRWRKGFVWVGVATTVINWVTLIVVHALLVGNEVDGIDGTRCSFTFEMTSFKLKWLGQFVNQAFQVVAFVWPLVEHMRRM-NNGAQKARTNPVFKSLV---------------------------------------FPLAVLDNAVNLGAIFFAINI 666
Y+CT LAAVNGTCMSASNA TFLHLFVKA+ASN+RN +WRK + WVGVATT NWVTL VVHALL G +VDG+DG RC FTFEM SF+LKW+ QF+NQAFQV AFV PL+ H+R M + A+ + + VF +LV FPLAVLDNAV+LGAI FA+++
Sbjct: 2 YSCTTLAAVNGTCMSASNAFTFLHLFVKADASNQRNPKWRKFYRWVGVATTAFNWVTLAVVHALLEGTQVDGLDGPRCKFTFEMNSFRLKWIAQFINQAFQVAAFVGPLIMHLRMMARSPAKSSEVDTVFATLVKKALIASGVSLLFTLIVTVLAFTKMQDMKNGTNKYLIPVFPLAVLDNAVSLGAIIFAVHL 195
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: A0A0L0FGU8_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FGU8_9EUKA) HSP 1 Score: 147 bits (371), Expect = 3.480e-39 Identity = 85/188 (45.21%), Postives = 109/188 (57.98%), Query Frame = 1
Query: 16 FGPFFEIFSEGVVLTVAIITTVSFAERCMKKS-APLNITGFLASIIAVFYSVYGLTYWFNGM-EGYNCTALAAVNGTCMSASNALTFLHLFVKANASNRRNRRWRKGFVWVGVATTVINWVTLIVVHALLVGNEVDGIDGTRCSFTFEMTSFKLKWLGQFVNQAFQVVAFVWPL-----VEHMRRMNN 558
F P FE + G+ L V+ T +F ER + + +N++G A +AV YS+Y LT F G+ + +NCT L A+NGTCMSASNAL F HLF K ASN+ + W K W+G +TV NWVTLIVVHAL+ G + G C F FE SF LKW Q +NQ F+ PL V H R N+
Sbjct: 5 FVPLFETAALGIALFVSTTVTCTFLERYITSNRGVVNLSGLAAGCLAVVYSLYALTVTFAGISDDFNCTVLQAINGTCMSASNALCFGHLFFKVYASNKNSSSW-KYTKWIGGFSTVFNWVTLIVVHALVEGTTQEDCGGLTCVFKFEKISFHLKWAAQLINQFVMGYLFLRPLCNNIVVRHRDRPNS 191
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: A0A835Z9N7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N7_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.120e-31 Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 1
Query: 19 GPFFEIFSEGVVLTVAIITTVS---FAERC-MKKSAPLNITGFLASIIAVFYSVYGLTYWFNGMEGYNCTALAAVNGTCMSASNALTFLHLFVKANASNRRNRRWRKGFVWVGVATTVINWVTLIVVHALLVGNEVDGIDGT-RCSFTFEMTSFKLKWLGQFVNQAFQVVAFVWPLVEHMRRMNNG 561
G FF F + T II F ERC ++K+ +NITGF+AS+IAV Y L Y++ G E +C L + G +SNAL FLHLF++A+A N+ N WR + W G+A T +NW TL+ V V G+ RC FTF+ ++F+ KW+ Q +N + FV+PL +HM+ M+
Sbjct: 4 GQFFAYFETTCLTTTFIIALEVGWFFGERCVLRKANAMNITGFMASLIAVTYCFLKLIYFYTGAEELSCDQLKIILGVGQGSSNALAFLHLFLRADAVNKINTHWRP-WRWFGIALTALNWATLLAV--CFTRTAVLATSGSQRCKFTFDQSTFEAKWVVQLLNHVVFSMMFVFPLRQHMKEMHRA 186
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: A0A835ZKC7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKC7_9STRA) HSP 1 Score: 127 bits (320), Expect = 9.220e-31 Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 7 SSGFGPFFEIFSEGVVLTVAIITTVSFAERCMKK-SAPLNITGFLASIIAVFYSVYGLTYWFNGMEGYNCTALAAVNGTCMSASNALTFLHLFVKANASNRRNRRWRKGFVW--VGVATTVINWVTLIVVHALLVGNEVDG--IDG-TRCSFTFEMTSFKLK 474
++ F + EI+S V V + TT +F R K A +N+TG LAS++ +F+S + +T WF G+ +C A+ VNG C+S+SNAL F+HLF+KA+ASN+ N RW VW + + V NW+ L+VVHAL+ E + G RC +TFE +FKLK
Sbjct: 4 ATNFPAYVEIWSLSVAQMVGLQTTAAFGYRYFTKHKAVINLTGLLASVLTLFFSTWAITLWFTGLGSISCMAIQVVNGLCLSSSNALAFVHLFLKADASNKLNPRWP---VWRTAAIMSIVANWIILVVVHALITTKEAPNPNLGGEARCKWTFEEYTFKLK 162
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: A0A835ZCN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN3_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 9.550e-21 Identity = 68/202 (33.66%), Postives = 97/202 (48.02%), Query Frame = 1
Query: 31 EIFSEGVVLTVAIITTVSFAERCMK-KSAPLNITGFLASIIAVFYSVYGLTYWFNGMEGY-NCTALAAVNGTCMSASNALTFLHLFVKANASNRRNRRWRKGFVWVGVATTVINWVTLIVVHALLVGNEVDGIDGTRCSFT-----------------------FEMTSFKLKWLGQFVNQAFQVVAFVWPLVEHMRRMNNG 561
E+ + G++LT+++ TTV F R + +N++ FLAS + + Y+ Y L YWF G+ + +C + V G A N++ FLHLF++A+A N N +WR V VG+ NW L V EV G D TRC F E+ F L +G V AF FVWPL H+R M+ G
Sbjct: 6 EVAALGMLLTISLQTTVFFGHRYFSYRRVWMNLSAFLASALGLIYAAYKLGYWFAGIGAFFSCRNVMMVGGIVQGACNSMAFLHLFLRADAINSLNSKWRYLRV-VGMVLVAANWAALGAVIVDRTYKEVQGPDRTRCLFVPGTVVLRVNHTHHISNRPPGVSLIEVRLFPLLPVG--VQSAF----FVWPLTVHIRLMDKG 200
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: A0A836CG65_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG65_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 8.840e-17 Identity = 57/152 (37.50%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 52 VLTVAIITTVSFAERC--MKKSAPLNITGFLASIIAVFYSVYGLTYWFNGMEGYNCTALAAVN-GTCMSASNALTFLHLFVKANASNRRNRRWRKGFVW--VGVATTVINWVTLIVVHALLVGNEVDGIDGTRCSFTFEMTSFKLKWLGQFV 492
V A + FAE+ + K + T LA++I V Y+ + L Y++ G+ T A G S SNAL FLHLF++A+ +N N W +W VG+A TVINW LIV AL + G RCS +E SF L W+ Q V
Sbjct: 37 VFLAAAMAGCFFAEKAFMLGKRNTITATALLAALICVVYTTWELAYFYAGLMAQPDTCKTATAWGVLRSISNALAFLHLFLRADVANSINPHWH---MWRRVGIALTVINWALLIVAPALRRITLIPTKLGARCSAQYESVSFTLMWVSQLV 185
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 4.940e-16 Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 1
Query: 85 FAERCMK--KSAPLNI--TGFLASIIAVFYSVYGLTYWFNGMEGYNC-TALAAVNGTCMSASNALTFLHLFVKANASNRRNRRWRKGFVW--VGVATTVINWVTLIVVHALLVGNEVDGID-GTRCSFTFEMTSFKLKWLGQFVNQAFQVVAFVWPLVEHMR 546
F R ++ K PL I TGFLAS++ +FY VY L Y++ M + A+ V +ASNAL FLHLF++A+A N N W W G+A V + LI V A V G RC ++E SF LKW+ Q + + F++PLV+HMR
Sbjct: 16 FGARALQGSKRHPLMIHWTGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFKVWIVMRTASNALAFLHLFLRADAVNAINPNWPP---WRRFGIALLVATLIMLIAVAATRSARLVRNPPFGERCEQSYEPVSFALKWVVQLLCHITFSLMFIYPLVDHMR 174 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2633.7191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2633.7191.1 >prot_H-paniculata_contig2633.7191.1 ID=prot_H-paniculata_contig2633.7191.1|Name=mRNA_H-paniculata_contig2633.7191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=222bp MPSSGFGPFFEIFSEGVVLTVAIITTVSFAERCMKKSAPLNITGFLASIIback to top mRNA from alignment at H-paniculata_contig2633:6760..16198+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2633.7191.1 ID=mRNA_H-paniculata_contig2633.7191.1|Name=mRNA_H-paniculata_contig2633.7191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9439bp|location=Sequence derived from alignment at H-paniculata_contig2633:6760..16198+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2633:6760..16198+ >mRNA_H-paniculata_contig2633.7191.1 ID=mRNA_H-paniculata_contig2633.7191.1|Name=mRNA_H-paniculata_contig2633.7191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1332bp|location=Sequence derived from alignment at H-paniculata_contig2633:6760..16198+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |