mRNA_H-paniculata_contig2632.7188.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: D7FXS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS2_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 6.420e-19 Identity = 60/148 (40.54%), Postives = 76/148 (51.35%), Query Frame = 1
Query: 1 RCLEAFTVALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDML-TPRSLWDPEDQYIPRDACGRSNTRTASRVPPVRPRGLRWERPVKFLQQPGKDSLELEAEEDSASREMLSQGTVRFDQPIDKVIWPTSLEKLIFGEKF 441
RCLEAF VAL+ + DG WYTST LQLASL CV CR V +L + V+ P LW+ R R +T + VP RPR + W RP L D + A+ + + VR D +D V+WP L+KL FGE F
Sbjct: 6 RCLEAFAVALNTSCDGNVWYTSTKELQLASLQFCVKCRKVPSLHLAVNNAHVPARLWNDHAATEARTGAKRPST---TPVPVFRPREVTWGRPAWLLS----DICLVFAK--------VERFLVRQDTVVDDVVWPCRLKKLFFGEGF 138
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: D7G241_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G241_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 1.370e-16 Identity = 58/147 (39.46%), Postives = 72/147 (48.98%), Query Frame = 1
Query: 1 RCLEAFTVALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDPEDQYIPRDACGRSN---TRTASRVPPVRPRGLRWERPVKFLQQPGKDSLELEAEEDSASREMLSQGTVRFDQPIDKVIWPTSLEKLIFG 432
+CLEAF VALD DGE+WY ST LQLASL LC ACR V TL + V+ TP LW + G RT +RVPP PR + W+ + L L +E A+ + L D D WPT L++L G
Sbjct: 11 QCLEAFVVALDLTCDGEKWYASTQQLQLASLDLCKACRGVPTLALSVERSTPEYLWAEAARGPRGRLTGEKKPPAARTRTRVPPFGPRRVMWKLRAR--------ELGLARKELWANVQCLLFTGYHNDWVCDGFSWPTGLKRLDLG 149
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 9.050e-15 Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 1
Query: 1 RCLEAFTVALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDPEDQYIP-RDACGRSNTRT-ASRVPPVRPRGLRWE 270
RCL+AF VAL+ A DG WY ST LQL+SLP CVACR V T+ ++VD TP L+ +D RD S+ R A+RVP +R R + W+
Sbjct: 29 RCLDAFKVALNQACDGGGWYVSTEQLQLSSLPFCVACRSVPTMHLKVDRSTPARLFSGDDDAAAVRDKGHGSSKRVMAARVPALRARKVTWQ 120
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: A0A6H5JR57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR57_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.400e-14 Identity = 63/182 (34.62%), Postives = 89/182 (48.90%), Query Frame = 1
Query: 1 RCLEAFTVALDAASDGE-------QWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDPEDQYIPRDACGRSNTRTASRVPPVRPRGLRWERPVKFLQQPG--KDSLELEAE------------EDSASREMLSQGTVRF--------------DQPIDKVIWPTSLEKLIFGEKF 441
R L+A TVAL+ A D +W+TST+NLQLAS+ LC ACR V TL V++D TPRSLW P + + + RVPP+R G+RWE F + G ++ E+ E +DS SR +LS T + D P+ ++ W TSL ++ G +
Sbjct: 16 RFLDALTVALNQAYDSRAGDGDNIRWFTSTLNLQLASVDLCRACRSVPTLLVKIDHDTPRSLWTPT-------VYAGAYSAPSGRVPPLRAHGVRWEIEATFAKHVGLAEEPREVCEEPRPSGGAPASDPQDSRSR-VLSTSTRQLVVPTSSDSPSCDPLDAPVREICWSTSLRRVELGSYY 189
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: A0A6H5JG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG83_9PHAE) HSP 1 Score: 80.9 bits (198), Expect = 2.280e-14 Identity = 51/142 (35.92%), Postives = 65/142 (45.77%), Query Frame = 1
Query: 22 VALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLW-----DPEDQYIPRDACGRSNTRTASRVPPVRPRGLRWERPVKFLQQPGKDSLELEAEEDSASREMLSQGTVRFDQPIDKVIWPTSLEKLIFG 432
VAL+ G+QWY STV LQLAS+ CVACR V+TL + V+ TPR LW D D RVPP RPR + W P L + KD+ + + S R D V P L+ ++FG
Sbjct: 2 VALNETYGGKQWYISTVQLQLASVEFCVACRSVSTLHLTVEEGTPRHLWADTWSDQSDXXXXXXXXXXXGRSVLVRVPPFRPREVTWNLPPSMLSEASKDAFK------NLECMSFSDAVERSGDSFDGVALPRGLKSVVFG 137
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 7.210e-14 Identity = 57/146 (39.04%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 1 RCLEAFTVALDAASDG--EQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDPEDQYIPRDACGRSNTR--TASRVPPVRPRGLRWERPVKFLQQPGKDSLELEAEEDSASREMLSQGTVRFDQPIDKVIWPTSLEKLI 426
RCL+AF VAL +G ++WYTST+ LQLASL C ACR L V VD TP +LW + G++N T++RVP V+ GL W RP + G S EL +S ++ S T +D V+WP L++L+
Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLW----------SLGQANPTAGTSTRVPAVQAVGLTWARPTESPL--GSASSELWTRLESLQLQV-SLCTAN----LDSVVWPQGLQRLV 136
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: A0A6H5KPY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY7_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 4.600e-12 Identity = 60/163 (36.81%), Postives = 74/163 (45.40%), Query Frame = 1
Query: 4 CLEAFTVALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDPEDQYIP--RDACGRSNTRTASRVPPVRPRGLRWERPV------KFLQQPGKDSLEL-EAEEDSASREMLSQG--TVRFDQP------IDKVIWPTSLEKLIFGEKF 441
CL+ TVAL+ DG+ WYTST LQLASL LC+ACR TL + VD TPR L D P + CG +RVP +R R W P D LE +A S + + T+ F Q +D V WP SL K+ G F
Sbjct: 136 CLKTLTVALNETCDGKSWYTSTKELQLASLELCMACRHYQTLHLTVDAHTPRRLLAAADAPSPHPKRLCG-------TRVPRLRARRATWNVPTASGMRTSIFATMDVDYLEFGQAFHGSLDAIVWPRRLKTIEFRQSSPLNRLLDGVSWPASLRKVCLGHDF 291
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 5.350e-12 Identity = 59/163 (36.20%), Postives = 75/163 (46.01%), Query Frame = 1
Query: 4 CLEAFTVALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDPEDQYIP--RDACGRSNTRTASRVPPVRPRGLRWERPVKF-LQQPGKDSLELEAEE------DSAS--------REMLSQGTVRFDQPIDKVIWPTSLEKLIFGEKF 441
CLEA VAL+ DG+ WYTST LQLASL C+ACR+ T+ + VD PR L D P + C +RVP +R R + W P L+ P ++E E DS R M FDQ I+ V WP L+ + FG F
Sbjct: 51 CLEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCW-------TRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDF 206
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: A0A6H5K4H1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H1_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 3.940e-11 Identity = 58/152 (38.16%), Postives = 69/152 (45.39%), Query Frame = 1
Query: 1 RCLEAFTVALDAAS-DGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDP----EDQYIPRDAC--GRSNTRTASRVPPVRPRGLRWERPVKFLQQPGKDSLELEAEEDSASREMLSQGTVRFDQPIDKVIWPTSLEKLIFGE 435
RCLEAF VAL D E WY ST LQLASLP C+ACRD TL + VD PR L E P C GRS RVP R + W R + +EL A + + F++ I V WP L +L FG+
Sbjct: 29 RCLEAFRVALQQTCLDRESWYVSTTQLQLASLPFCLACRDSVTLCLTVDDSIPRRLLADVGGNEAVVAPAGPCQCGRS------RVPRFHAREVTWHR---------QSCVELSASIYALAEVDFFILDGGFNRAIGAVAWPRKLRRLEFGD 165
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI) HSP 1 Score: 68.9 bits (167), Expect = 6.400e-11 Identity = 52/163 (31.90%), Postives = 74/163 (45.40%), Query Frame = 1
Query: 4 CLEAFTVALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLTPRSLWDPEDQYIP--RDACGRSNTRTASRVPPVRPRGLRWE-RPVKFLQQP-----GKDSLELEAEEDSASREMLSQGTVR---------FDQPIDKVIWPTSLEKLIFGEKF 441
CL + VAL+ DG WYTST LQ ASL C+ACR+ + ++VD PR+L D P + C +RVP +R R + W R L P D LE D + + ++ F+QP++ + WP SL+ L+ G F
Sbjct: 14 CLSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCW-------TRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKWPESLQHLVLGGDF 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2632.7188.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2632.7188.1 >prot_H-paniculata_contig2632.7188.1 ID=prot_H-paniculata_contig2632.7188.1|Name=mRNA_H-paniculata_contig2632.7188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=198bp RCLEAFTVALDAASDGEQWYTSTVNLQLASLPLCVACRDVATLDVRVDMLback to top mRNA from alignment at H-paniculata_contig2632:5333..6244+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2632.7188.1 ID=mRNA_H-paniculata_contig2632.7188.1|Name=mRNA_H-paniculata_contig2632.7188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=912bp|location=Sequence derived from alignment at H-paniculata_contig2632:5333..6244+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2632:5333..6244+ >mRNA_H-paniculata_contig2632.7188.1 ID=mRNA_H-paniculata_contig2632.7188.1|Name=mRNA_H-paniculata_contig2632.7188.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1188bp|location=Sequence derived from alignment at H-paniculata_contig2632:5333..6244+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |