mRNA_H-paniculata_contig26207.7161.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A6H5J594_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J594_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.180e-56 Identity = 174/571 (30.47%), Postives = 276/571 (48.34%), Query Frame = 3
Query: 597 TERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLK--IGAIRTDSGGEF-DGDFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALM--------HDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIITEHKMAPRKEKCIILGISHNHPSGTVRVINVKTGHMVIRQNVSWH--------PESP-----ENRQGDGLAAEIEGG---------------------------NDKAIDRTPRLGSSGK-----MELPTTP--------TIDIM----AMQVALAMPEELRGDLLVQPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*T-QVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYP----DFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLL 2090
T R++VDLGG V S+G Y MI+ D++R + F++ KSDA +A +S+ A + G+ I +R+D+GG F G+F ++ I E T +P++N VAER LGL E +A H Q +++LWAEAM++AC+ N + S+ + +P+E WY P PF Y K K+ P+ E C +G S +HP RV+ + G + +NV+W P+ P +G+ ++E ++++D +E+ +P +D+ A + A+ +P+EL D+ +P ++EA S W A E++GLI G T + P+ V+ R +K K E GK+ K K RLVA G +Q G+ + E SP A SI+++++LA + EL H+D EQA++Q +D HE+ +K P G+ RL+K++YGL QA R + ++ +DL GFEQS +D CV ++ EV+ II I+VDD+L
Sbjct: 125 TGRVFVDLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFHAN-VRADGIPSLIEIVRSDNGGGFFGGEFASVCNELVIKQEFTPAHSPEFNGVAERGLGLTEEAAMAARIQAKVLFGHVQLPK-TDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYC-KWQRPSKLLPKGESCFYVGPSRDHPRDCHRVLT-RAGTIQETRNVTWEALPSQLPPPQPPLPIEVAEEEGEESDDDVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEESMDXXXXXXXXXXXXXXXVEVEASPPAARRPQHVVDLADFNTAARDAVELPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLD-------HEVFMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL 683
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A182HAC3_AEDAL (Integrase catalytic domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAC3_AEDAL) HSP 1 Score: 214 bits (545), Expect = 2.030e-55 Identity = 166/567 (29.28%), Postives = 271/567 (47.80%), Query Frame = 3
Query: 564 PKKTDKRATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEFDG-DFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGG-SEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIITEH--KMAPRKEKCIILGISHNHPSGTVRVINVKTGHMVIRQNVSWHPESPENRQ--GDGLAAEIEGGNDKAIDRTPRLGSSGKMELPTTPTIDIMAMQVA-----------LAMPEELRGD--------------------------------LLVQPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLINTKCTQSH 2117
PK+ D+ + + +++DL GPM T G + Y + IV DYSR ++KKSDA ++ ++A C T G +++D GGEF G + L GI + ++P +PQ N VAERR L+E T+ L+ EGG EK W EA+ + + N + SI ++P E+WY +H + FG+ +++ I E KM P+ +G S+ H + R ++ TG + I ++ + ++ +R+ D + E + I P L S ++ + D + + A + E RGD L +P + EA S + W A E Q LIDN V+ P ++ ++ +R +KRK++ DGKV++FK RLVA G Q G+ F ++ +P + +++L++A + +++H+D + AYL +++E+F+ P + RL K+IYGL QA R W +T L GF Q ADSC++ K G I++YVDD L+ K +SH
Sbjct: 7 PKQCDRGSKAILDVVHMDLSGPMTSTPSG-NRYFLSIVDDYSRMSFTYLLRKKSDAAVKIRDFVAFCKTQVGKTPRVLQSDGGGEFVGNELQRFLRSEGIVCQFSAPYSPQQNGVAERRNRYLKEMTMCLL---LEGGLDEKYWGEAVLTSTYVQNRLPSRSI--GMSPFERWYGRKPSFKHFRIFGSDAWVQ-IPAERRKKMTPKARLLTFVGYSNQHKA--YRFLDKTTGRITISRDAKFLEDTEMDRKIGCDERIGQRE--EQETIVELPALPKSDEVSIAEEEEEDFIGYESAEELFVGQDQEEVVFDEVDRGDPNGEDGRVLPRRANRGVLPPRMNDYVVGRAAVALDEPTTYEEAVGSEEKEKWIKAMSEEYQSLIDNDTWELVDPPTDRNIIGSRWVFKRKLNADGKVDRFKARLVAQGFAQRVGVDFDDSFAPVAMHSTFRLLLTVAGYRKMQVKHLDVKSAYLYGTLEEEVFMR-QPPGFAVPHKEQQVCRLRKSIYGLKQAARTWHRTITDILLKMGFLQCKADSCLYRKKCAGGEWMYILLYVDDFLVVCK-QESH 560
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A443N8T5_9MAGN (Integrase, catalytic core n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443N8T5_9MAGN) HSP 1 Score: 216 bits (549), Expect = 3.410e-55 Identity = 167/522 (31.99%), Postives = 248/522 (47.51%), Query Frame = 3
Query: 540 CQGSPS-RVPKKTDK-RATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEFDGDFHLKL-DDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIIT-EHKMAPRKEKCIILGISHNHPSGTVRVINVKTGHMVIRQNVSWHPESPENRQGDGLAAEIEGGNDKAIDRTPRLGSSGKMELPTTPTIDIMAMQVALAMPEELRGDLLVQPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 2093
CQ S R+P T K RA+ + ++ DL GP + S YVMI+V D+SRF V F++ KS+A + + + L+I +RTD+GGE+ D L +HGI H++T P+TPQ N VAER+L L ++ +H T+ +LWA A+ AC + N + +P E Y + + Q FG+ CY+ T K+ PR +CI +G H G W PE ++ ++ D D L K TID P RG +P + EA+ G W+ A + EI L N V PKN V+ + YK K DG ++++K RLVA G Q G+ + E S V+I+ I+SLAA + W+L +D + A+L +D++IF+E + +FP RL KA+YGL QA R W K+ L GF+ S+ADS +F K ++++YVDD++I
Sbjct: 505 CQYRKSHRLPFPTSKNRASTVLQLVHSDLMGPTKTLSYSSFRYVMILVDDFSRFTWVYFLENKSEAFSKFVQFKEQVEKEFELQIKCLRTDNGGEYMSDQFLNYCKEHGIQHQMTCPETPQQNGVAERKLAHLTSMCLSWLH--TKNLPRELWAAAVQSACHVINR-LPAWPGTEPSPFEALYHHKPNVSYFQVFGSDCYVHISKTIRTKLDPRARRCIFVGYDA-HRKG-------------------WKCMDPETKK-------VDVSRDVVFDEVSSLQIDTKRG-----TIDFS--------PFPDRGSCEDEPTSYNEAK---GISEWEEAMQEEISALNKNCTWELVSKPKNVTPVTCKWVYKLKKRADGTIDRYKARLVACGFSQQYGLDYDETFSHVAKMVTIRTIISLAAYKGWKLWQLDVKNAFLYGELDRDIFMEQPHGFIS-KEFPNHVCRLKKALYGLKQAPRAWYGKIAQYLEFCGFKSSNADSSLFVK-KTSSTFTMLLLYVDDMII 978
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A6S7HNY1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HNY1_PARCT) HSP 1 Score: 212 bits (540), Expect = 5.020e-54 Identity = 165/568 (29.05%), Postives = 274/568 (48.24%), Query Frame = 3
Query: 555 SRVPKKTDKRATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEF-DGDFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALM-HDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIITEHKMAPRKE-KCIILGISHNHPSGT--VRVINVKTGHMVIRQNV-----SWHPES-------------------PENRQGDGLAAEIEGGNDKAIDR-----------------------TPRLGSSGKMELPTTPTIDIMAMQVALAMPEELRGDLLVQPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIV---DGEVVAIII-IYVDDLL 2090
++ P KRAT E ++ D+ GPM V S+G S Y + + DY+R+ V FIK K + A + ++ G + +RTD+GGE+ +F L + GI H+LT P P N V+ER L E T ++M H +T + WAEA+N A + N S T+S++ +TP+E ++ + +L+ FG + + K K K + +G +P GT ++ + T + +++ +H P+ D A IEG +++ +D T LG + P+ + + L D+ +P H +EA W+ A + E + L+ N V PK K +V +R +K K + DG VE+FK RLVA G Q +GI +QE SP SI+ +L++A I DWE+ +D + A+LQ +D+ IF++ E +V + P +L+++IYGL QA RCW++ + L + G+ +S+AD C++ K + +G++ +I+ +YVDD+L
Sbjct: 470 TKYPSGVAKRATEPFELVHSDVCGPMSVNSIGGSRYFVTFIDDYTRYTYVYFIKHKDEVLAKFKEFVNLATNLTGKSVKTLRTDNGGEYCSKEFESFLKEKGIVHQLTVPYNPAQNGVSERMNRTLVESTRSMMSHGKTP---VEFWAEAINTAVYLRNRSPTTSLK-EITPYECLFKQKPDVSNLRVFGCEAFAHIPEKQRKKFDEKSRKAVFIG----YPEGTKGYKLYDPSTRKFIRSRDIVFVEGKFHDFKDGCSGKTCTDFYIPVDDVIPQVEIQDVPAVVIEGDHNELVDEENEREEVHVQPVGATYEENFMRETGNLGDKRQRRAPSR-------FDDKCYVADNLTADIN-EPVHIQEAWTGDHSVEWKEATDSEYESLMKNDTWELVPPPKGKNIVGSRWVFKVKHTADGSVERFKARLVAQGYSQSQGIDYQEIFSPVVRYTSIRSLLAVANICDWEISQMDVKTAFLQGELDEVIFMKQPEGYVDQ-ERPDHVCKLNRSIYGLKQAARCWNSAIDTFLISNGYTKSNADPCIYIKSIKRKNGKIDFVILALYVDDIL 1020
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 211 bits (537), Expect = 1.230e-53 Identity = 168/566 (29.68%), Postives = 270/566 (47.70%), Query Frame = 3
Query: 564 PKKTDKRATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEFDGD-FHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIITEH---KMAPRKEKCIILGISHNHPSGT----VRVINVKT---GHMVIRQNVSWHPESPENRQGDGLAAEIEGGNDKAIDRTPRLGS--------SGKMELPTTPTID-------------------IMAMQVALAMPEELRG------------DLLV---QPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIV---DGEVVAIII-IYVDDLL 2090
PK T RA+ E ++ D+ GPM V S G S Y + + DYS++ V F+K K + + +++ + G K+ +R+D+GGE+ F L +HGI H+ T P P+ N AER L E ++M+ G ++ WAEA+N A N S T+S+ N TP E + + +L+ FG V Y+ I +H K+ + KC+ +G +P GT + + KT VI + S+H E D ++ P +G + +E P ++ M L P + R DL +P++ EA ++ W+ A + E L++NG V P +K +V +R +K K DG VEKFK RLVA G Q +GI + E SP SI+ +L+LA I DWE+ +D A+LQ + EI+++ E + + + P +L K++YGL Q+ RCW++ + + L + G++Q ADSC++ K V +G++ +I+ I+VDD+L
Sbjct: 487 PKDTRHRASELFEIIHTDVCGPMHVKSFGNSKYFVTFIDDYSKYTQVYFLKSKDEVLEKFKEFVSY-VNTLGKKVKVLRSDNGGEYCSKAFKDYLKEHGILHQTTVPYNPEQNGTAERMNRTLLEAARSMMYHA--GMPKEFWAEAVNTATYTRNRSPTNSLN-NATPFECLFNRKPDVSNLKVFGCVAYVH--IPDHQRKKLEEKSRKCMFVG----YPDGTKGFKLYDLTKKTFIRSRDVIFEERSFHKFKYEQSSESNSDVYYPAKEDSQVN--PPIGQVQIQADDENVNVEQNPQPILENNVPLQENNNRVGARYEDNFMREVENLNQPRQRRAPERYEEMYVCADDLTADINEPRNISEAWSNEYNTQWKKATDSEFNALMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGY-RSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDIL 1039
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A5N6P8N4_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P8N4_9ASTR) HSP 1 Score: 208 bits (530), Expect = 2.330e-53 Identity = 164/550 (29.82%), Postives = 261/550 (47.45%), Query Frame = 3
Query: 540 CQ-GSPSRVP-KKTDKRATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEF-DGDFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIIT-EHKMAPRKEKCIILGISHNHPSGTVRVINVKTGHMVIRQNVS-------WHPESPENRQGDGLAAEIEGGN----------DKAIDRTPRLGSSGKME-LPTTPTIDIMAMQVALAMPE----ELRGDLLVQPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYP------DFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 2093
CQ G ++P K + + ++ D+ GP+ S+G Y++ + DYS+F V F++ KS+A A + + G K+ +R+D+GGE+ +F+ L+D I +LT P TPQ N V+ER+ L E + +LMH + G + WAEAM A +TN + +TP+EK Y+ + H + FG VCY+ HK+ + +CI +G + + + TG + +NV W E L E++ D+ D + + G +E LP + + ++ P + + L +P+ EA GW A E E+ LI N V P + ++ + YK K DG VE+ K RLVA G Q G +++ SP +++MIL+LA QDW+L +D A+L +D H IH++ P + P +L KAIYGL Q+ R W K++ L GF + AD+ +F K++ G VAI+++YVDDL+I
Sbjct: 37 CQYGKAHQLPYKPATVHSKGPLDLVHTDVFGPVNKKSIGGMVYMIEFIDDYSKFVWVYFMQSKSEALAKFKEFRLVAERETGRKVKVLRSDNGGEYMSREFNDFLNDCQIGRQLTCPYTPQQNGVSERKNRHLAEVSGSLMHSKNVPG--QFWAEAMQTAAYVTNRLPQQGLNF-LTPYEKLYKVKPTVSHFRVFGCVCYVFVPNNLRHKLEKKAIRCIFVGYDNQRKGW--KCCDPNTGKCYVSRNVVFDETSSWWSAEQKILPDSQPLQDELQASKVDLRFEVTTPDEEHDESVQHQEGGGVEELPFEESGLRRSTRIRRQNPRYANVAISEETLREPESFEEASKHHGWML---AMESEVAALISNQTWELVPLPVDVKPITCKWVYKIKRKTDGTVERLKARLVARGFTQQFGFDYEDTFSPVAKITTVRMILALAVNQDWKLYQMDVHNAFLYGELD-------HVIHMEQPIGFVNSEHPKIVCKLKKAIYGLKQSPRAWYGKISEFLEHNGFASTSADASLFVKVL-GSKVAIVLVYVDDLII 570
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1) HSP 1 Score: 207 bits (528), Expect = 8.710e-53 Identity = 156/545 (28.62%), Postives = 268/545 (49.17%), Query Frame = 3
Query: 546 GSPSRVP-KKTDKRATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEF-DGDFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIITEHKMAPRKEKCIILGISHNHPSGTVRVINV--KTGHMVIRQNVSWHPESPENRQGDGLAAEIEGGNDKAIDRTPRLGSSGKMELPTTP-------------TIDIMAMQV-----ALAMPEELRGDLLV-------QPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 2093
G ++ P T +RAT E ++ D+ GPM V + G YV+ + D SR+ V +K KS+ + + E + KI +R+D GGE+ +F L GI +LT P TPQ N V+ERR L + ++M W A+ A N + + S++ TP+E W+ L L+ +G Y++K+ E K+ P+ EKC+ +G +P T+ G + + +N S+ + +++ G E+ D+ + P G++ + +P P T D +A ++ + PE +L +P ++ EA A P W A + EI + +N V T + P ++ + + +K+K DG V +K RLVA G RQ++G+ + E SP S++++L++AA D+E+ +D + A+L + +E+++ E V P + +L ++IYGLVQA R W+ + + A GF Q++ ++CV+ K V G VA +I+YVDD+L+
Sbjct: 149 GKMTKTPFSGTMERATNLLEIIHTDVCGPMSVEARGGYRYVLTLTDDLSRYGYVYLMKHKSETFEKFKEFQNEVENQRDRKIKFLRSDRGGEYLSHEFGTHLRKCGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMM--SLTDLPLSFWGYALETATFTLNRAPSKSVE--TTPYELWFGKKPKLSFLKVWGCDAYVKKLQPE-KLEPKSEKCVFIG----YPKETIGYTFYLRSEGKIFVAKNGSFLEKEFLSKEVSGRKVEL----DEVLPLEPENGATQE-NVPEVPAPTREEVNDDDHETSDQVATELRRSTRTRSAPEWYGNPVLEIMLLDNGEPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVD-PKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKK-VSGSSVAFLILYVDDILL 677
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A1Y1LP39_PHOPY (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LP39_PHOPY) HSP 1 Score: 204 bits (519), Expect = 1.610e-52 Identity = 170/579 (29.36%), Postives = 277/579 (47.84%), Query Frame = 3
Query: 516 GGLQRMLHC-QGSPSRVP--KKTDKRATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEF-DGDFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGGSEK-LWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFG--TVCYIRKIITEHKMAPRKEKCIILGISHN-----------HPSGTVR---------------VINVKTGHMVIRQN-----------VSWHPESPENRQGDGLAAEIEGGNDKAIDRTPRLGSSGKMELPTTPT---IDIMAM---QVALAMPEELRGDLLVQPKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEAR---RLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 2093
G ++ + C +G R+P +K RAT E L+ DL GPM V S+G + YV+ ++ DY+R V F+K K++ L + G +I AIR+D GGE+ + + GI H+LT TP+ N VAER L EK A++ TE +K WAEA+ A N S T ++ ++TP E W L H++ FG +I K K+ + E+ I +G S H R +I VK G+ ++ V E + E E + RT R ++ LP+ ++I M QVA++ EE + L P + +EA + P W+GA E E+Q N T E P+N++ + ++ +K K + DG + ++K RLVA G Q +G+ + E SP +++++L++A + +W++ H+D A+LQ +++EI++ I E + E++ RL KA+ GL Q+GR W K+ +L GF S D CV+++ + ++V +I +YVDD ++
Sbjct: 119 GTMEACVSCIKGKQHRLPFPQKKVHRATEVLELLHSDLCGPMNVPSIGGARYVLTLIDDYTRMTFVSFLKTKNEVFTKLSEFRTYIENQTGKRIKAIRSDRGGEYVNKQLETFFSETGIHHQLTIAHTPEQNGVAERCNRTLIEKARAML---TEANLDKSYWAEAVCTANYCKNRSPTIAVS-HMTPFEAWTGEKPDLSHMRTFGCRAFTHIPKA-NRSKLDDKSEEKIFVGYSVTSKGYRLIDPVTHKVTEARDVIFIENFKNEVENEIIPVKMGNSTFYEDDTTCTSTTSRIVQPEVHEVEKETESEVRVEAEASIPETSRRTIR-----QIRLPSRYDDCEVEIPKMHRCQVAISNTEE---EFLDAPLNLQEALSRPDADKWKGAIEEELQAHERNRTWTVTELPENRIPIKSKWIFKLKCNSDGTLNRYKARLVAKGYSQKEGLDYTETFSPVVRYETLRILLAIATLYNWDIHHLDAVVAFLQGTIEEEIYMTIPEGLEVSNERGSESKLVCRLQKAVNGLKQSGRAWYKKLDNELKEIGFNCSTFDCCVYYRFSNSKIV-VIAVYVDDFIL 683
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 203 bits (517), Expect = 4.320e-51 Identity = 151/534 (28.28%), Postives = 259/534 (48.50%), Query Frame = 3
Query: 579 KRATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEF-DGDFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVCYIRKIITEHKMAPRKEKCIILGISHNHPSGTVRVINV--KTGHMVIRQNVSWHPESPENRQGDGLAAEIEGGNDKAIDRTPRLGSSGKMEL-PTTPTI--------DIMAMQVALAMPE---------ELRGDLLVQ--------PKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLI 2093
+RA+ E ++ D+ GPM V + G YV+ + D SR+ + +K KS+ + + +E + KI +R+D GGE+ +F L +GI +LT P TPQ N V+ERR L + ++M W A+ N + + S++ TP+E W+ L L+ +G Y++K+ E K+ P+ EKC+ +G +P T+ G + +N S+ + +++ G E+ D+ I SS E+ P PT D A P E G+ +++ P ++ EA A P W A + EI + +N V T V+ P + + + +K+K +G V +K RLVA G RQI+G+ ++E SP S++++L++AA D+E+ +D + A+L + +E+++ E V P + +L ++IYGLVQA R W+ + + A GF Q + ++C++ K V G VA +++YVDD+L+
Sbjct: 489 ERASDLLEIIHTDVCGPMNVEARGGYRYVLTLTDDLSRYGYIYLMKHKSETFEKFKEFQSEVENQRDRKIKCLRSDRGGEYLSHEFGTHLRKYGIVSQLTPPGTPQRNGVSERRNRTLLDMVRSMM--SLTDLPLSFWGYALETTAFTLNRAPSKSVE--TTPYELWFSKKPKLSFLKVWGCDAYVKKLQPE-KLEPKAEKCVFIG----YPKETIGYTFYLRSEGKTFVAKNGSFLEKEFLSKEVSGRKVEL----DEVITPPLEQESSATQEVVPVVPTPTEEEVNDDDHEASDQVTTEPRRSTRVRSAPEWYGNPVMEIMLLDNGEPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVD-PKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKK-VSGSSVAFLVLYVDDILL 1007
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Match: A0A075B3L7_ROZAC (Integrase, catalytic core domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B3L7_ROZAC) HSP 1 Score: 201 bits (512), Expect = 8.150e-51 Identity = 162/566 (28.62%), Postives = 261/566 (46.11%), Query Frame = 3
Query: 540 CQGSPSRVPKKTDK-RATWATERLYVDLGGPMRVTSLGRSSYVMIIVGDYSRFQAVEFIKKKSDATAALQSYIAECITPKGLKIGAIRTDSGGEF-DGDFHLKLDDHGISHELTSPDTPQYNSVAERRLGLLREKTIALMHDQTEGGSEKLWAEAMNYACDITNMSCTSSIQGNVTPHEKWYETTTPLEHLQPFGTVC--YIRKIITEHKMAPRKEKCIILGISHNHPSGTVRVINVKTGHMVIRQNVSWHPESPE-------NRQGDGLAAEI--------EGGNDKAIDRTPRLG-----SSGKMELPTTPTIDIMAMQVALAMPEELRG--------------------DLLVQ-PKHHREAQASPGWKHWQGAEEVEIQGLIDNGV*TQVECPKNKLVVSTRMPYKRKISEDGKVEKFKCRLVAHGNRQIKGIYFQEASSPAPAAVSIKMILSLAAIQDWELRHVDFEQAYLQVPVDQEIFVEIHEIHVKYPDFPGEARRLDKAIYGLVQAGRCWSTKVTADLSAKGFEQSHADSCVFHKIVDGEVVAIIIIYVDDLLINTK 2102
+ RVP K + +A E L+ DL GPM+V + YV +++ D+SR + ++ K++A L+ I T G K+ +R+D GGEF DGD + GI H LT TP+ N AER+ GLL L+ G + W E +N AC + N + TS I GN+TP E + + HL+ GT C YI KI K+ + E+ ++G + + +RV KT +++ +V + E N + D L EI E +K D L S+ + + + P LR D + + P++ +EA + W+ A E E + L +N E P ++ V R + +K +GK++++K RLVA G Q GI ++ +P S++++++L DW + +D AYL +D I+++ E +K L K++YGL Q+GR W+ K+ DL GF++ AD C++ K +G V+ +I IYVDD++I +K
Sbjct: 21 ARNKSKRVPFKGKRPQAKDIGEVLHTDLCGPMQVETPSGKRYVHVVIDDFSRMCWIRLLRNKAEAKVTLREIITFIETQSGRKVKTVRSDRGGEFVDGDLQKYFTEKGIKHYLTDKYTPEMNGTAERKNGLLMAAARCLLRQA--GLPDTFWGEMVNTACYLQNRTPTS-ILGNITPVEAFTGEKPSVAHLRTIGTKCFVYIPKI-KRQKLDEQAEEHTLVGYDISERNYRLRV--GKTNRVIVSTHVKFTNIQQELNKMKYTNLEDDLLDNEIDEEIKMNQETSTNKQYDFKEELNKLLINSNIQKHNKNNEENTNVEKEPIQPRPRNLRNLERKDYAELSNFKDVALLSTDRISEIPRNVKEALSGAEANEWKQAMETEYKSLEENKTWKLCELPASRTAVGCRWVFAKKFDSEGKLQRYKARLVAQGFSQRPGIDVEQTYAPVTRIQSVRILIALGVQLDWHMHQMDMVTAYLNGTLDTMIYMKQPEGFIKEGS-ENLVCDLQKSLYGLKQSGRLWNIKIDCDLRKNGFKRCRADWCIYVKQENG-VIIVIAIYVDDIIIMSK 578 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26207.7161.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26207.7161.1 >prot_H-paniculata_contig26207.7161.1 ID=prot_H-paniculata_contig26207.7161.1|Name=mRNA_H-paniculata_contig26207.7161.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp MTSDETAFEDYTPALPGTMCEIANGAFVPVAGWGRLVLLVSQPDGKSRVAback to top mRNA from alignment at H-paniculata_contig26207:11..2443- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26207.7161.1 ID=mRNA_H-paniculata_contig26207.7161.1|Name=mRNA_H-paniculata_contig26207.7161.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2433bp|location=Sequence derived from alignment at H-paniculata_contig26207:11..2443- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26207:11..2443- >mRNA_H-paniculata_contig26207.7161.1 ID=mRNA_H-paniculata_contig26207.7161.1|Name=mRNA_H-paniculata_contig26207.7161.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig26207:11..2443- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |