mRNA_H-paniculata_contig262.7156.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: D7FU30_ECTSI (zf-met2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU30_ECTSI) HSP 1 Score: 134 bits (336), Expect = 9.860e-34 Identity = 70/79 (88.61%), Postives = 73/79 (92.41%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFPGRLS 685
MGGGNAQKSATARARNEAKKAKAGKGSQLAVN+AA +I+CQVCRQSFMSVSNDAML HVT KH KKTPAECFPGRLS
Sbjct: 1 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNKAAQSIVCQVCRQSFMSVSNDAMLADHVTAKHNKKKTPAECFPGRLS 79
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A0A836C7H0_9STRA (At2g23090 like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7H0_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 6.830e-16 Identity = 45/79 (56.96%), Postives = 55/79 (69.62%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFPGRLS 685
MGGGN QKS AR + + AK KGSQLA+N AACNI+CQVCRQ+FM V+N+ L H NKH K P+ CFP +L+
Sbjct: 1 MGGGNGQKSKAAREKAAKRDAKP-KGSQLAMNSAACNIVCQVCRQTFMMVANETTLREHALNKHP-KSAPSACFPDKLT 77
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A4RZ85_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RZ85_OSTLU) HSP 1 Score: 72.0 bits (175), Expect = 5.930e-12 Identity = 43/76 (56.58%), Postives = 47/76 (61.84%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFPG 676
MGGGNAQKSATAR + K KAG GSQLA N A + +CQVCR SFM L H NKH K+T CFPG
Sbjct: 1 MGGGNAQKSATARKKAMEKAQKAGAGSQLAANAKAMSTVCQVCRASFMCTLAPIKLKEHSDNKHP-KQTFEHCFPG 75
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A0A059LL58_9CHLO (zf-met2 domain-containing protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LL58_9CHLO) HSP 1 Score: 71.6 bits (174), Expect = 8.110e-12 Identity = 41/76 (53.95%), Postives = 47/76 (61.84%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFPG 676
MGGGNAQK+A ARA+ K AK GSQL N AA NI+CQ+CR +F+ S L H NKH K ECFPG
Sbjct: 1 MGGGNAQKTAMARAKKLEKAAKGSAGSQLKSNAAANNIVCQICRSTFICTSTVVKLKEHADNKHPKNKFE-ECFPG 75
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A0A507FQ37_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FQ37_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 7.200e-11 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFP 673
MGGGNAQKSA ARARN AK A A SQL VN+ A N+ C +CRQ+F+ + L H+ +KH GK T +CFP
Sbjct: 1 MGGGNAQKSAMARARN-AKNAGADAKSQLKVNEQAKNVQCGICRQTFLLTIREKALQEHIDSKHSGK-TIKDCFP 73
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A0A1Y2D182_9FUNG (DUF1909-domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D182_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 7.400e-11 Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFP 673
MGGGNAQKSA ARAR +AK+A A SQL VN++A N+ C +CRQ+F+ + L H+ +KH GK T +CFP
Sbjct: 1 MGGGNAQKSAMARAR-KAKEAGAEAKSQLKVNESAKNVQCSICRQTFLLTIREKALNEHIDSKHSGK-TIKDCFP 73
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: E1ZJ16_CHLVA (zf-met2 domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJ16_CHLVA) HSP 1 Score: 68.2 bits (165), Expect = 1.380e-10 Identity = 43/78 (55.13%), Postives = 50/78 (64.10%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAK-AGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFPGR 679
MGGGNAQKSATAR R K K AG SQLA N A +I+CQ+CRQSFM A L H ++H +K ECFPG+
Sbjct: 1 MGGGNAQKSATARQRKAEKDKKLAGGKSQLADNAKALSIVCQICRQSFMCNMTPAKLKEHSDSRHPKQKFE-ECFPGQ 77
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A0A8K0PT89_9PEZI (At2g23090 like protein n=1 Tax=Chaetomium sp. MPI-SDFR-AT-0129 TaxID=2823209 RepID=A0A8K0PT89_9PEZI) HSP 1 Score: 67.0 bits (162), Expect = 3.520e-10 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFP 673
MGGGN K+A RARN+ KKA A SQL N AA +IIC C+Q+F+S S + LT H NKH T +CFP
Sbjct: 1 MGGGNGAKAAQKRARND-KKAPAKAASQLKANAAAMSIICNQCKQTFLSTSREPQLTLHAVNKHNA--TLPQCFP 72
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A0A175WAH6_9PEZI (zf-met2 domain-containing protein n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175WAH6_9PEZI) HSP 1 Score: 66.6 bits (161), Expect = 4.950e-10 Identity = 39/75 (52.00%), Postives = 46/75 (61.33%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFP 673
MGGGN K+A RARN+ K A K SQL N AA NI+C VC+Q+F+S S LT H NKH T +CFP
Sbjct: 1 MGGGNGAKAAQKRARNKEKAAPVAK-SQLKSNTAAMNIVCNVCKQTFLSTSRAPQLTQHAENKHNSTLT--QCFP 72
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Match: A0A2V3IZX6_9FLOR (zf-met2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZX6_9FLOR) HSP 1 Score: 65.9 bits (159), Expect = 8.990e-10 Identity = 39/75 (52.00%), Postives = 47/75 (62.67%), Query Frame = 2
Query: 449 MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVSNDAMLTTHVTNKHGGKKTPAECFP 673
MGGGN K+AT R RN AK KA K SQ+A NQ+A NIIC +CR +FM +A L H +KH K +CFP
Sbjct: 1 MGGGNGAKAATKRERNAAKNKKA-KRSQMASNQSAMNIICNICRATFMCTMKEASLRQHAESKHP-KHQLTDCFP 73 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig262.7156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig262.7156.1 >prot_H-paniculata_contig262.7156.1 ID=prot_H-paniculata_contig262.7156.1|Name=mRNA_H-paniculata_contig262.7156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp MGGGNAQKSATARARNEAKKAKAGKGSQLAVNQAACNIICQVCRQSFMSVback to top mRNA from alignment at H-paniculata_contig262:21545..28519- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig262.7156.1 ID=mRNA_H-paniculata_contig262.7156.1|Name=mRNA_H-paniculata_contig262.7156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6975bp|location=Sequence derived from alignment at H-paniculata_contig262:21545..28519- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig262:21545..28519- >mRNA_H-paniculata_contig262.7156.1 ID=mRNA_H-paniculata_contig262.7156.1|Name=mRNA_H-paniculata_contig262.7156.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=480bp|location=Sequence derived from alignment at H-paniculata_contig262:21545..28519- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |