mRNA_H-paniculata_contig2618.7152.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2618.7152.1
Unique NamemRNA_H-paniculata_contig2618.7152.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: A0A6H5KP19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP19_9PHAE)

HSP 1 Score: 208 bits (529), Expect = 6.520e-58
Identity = 140/321 (43.61%), Postives = 182/321 (56.70%), Query Frame = 1
Query: 1138 MERTPSIEELIRIVSNITSSIGLEQGTLPTEDHVEPIKQFVASLTPQSLGLAPDAHERITPPA-LPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLG---FAGGLGFGG------------------------------------GDARRRDAGELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQGVAVLDVLIPPYDASCGRNCTYYRADHVQSSVGLGGLAGGGGSWGTXXXXXXXXGSNNATQGAHVVRLVPCTSGDNYAVVSGEIIAPL 1980
            M+RT +  +LI +     +SI    G   T + ++PI+Q +A LTP++LG+ P AH  I+PP+ L G IRYLHI Q A  +SIGVFVLPP +CIPLHDHP+M VVSHVLYG +K+TCYDR+    +T+ G +S       +G   +A G  FGG                                      A+++   +LA L  SG H AP+TS L PT ANVHELEAG +G A+LDVLIPPYD   GR+CTYYR ++   +       GG  + G XXXXXXXXG         +VRLVPC   D + V  GE ++PL
Sbjct:    1 MDRTRAAVQLIAVARATATSIHSRPGGEMTPEDIQPIEQAMAMLTPEALGMVPYAHPYISPPSILSGEIRYLHIAQEA-TFSIGVFVLPPGSCIPLHDHPDMSVVSHVLYGSVKITCYDRIAEDTATVGGGASXXXXXXXVGLSHWAPGSWFGGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQQQRQHQLASLRESGWHHAPHTSRLTPTMANVHELEAGREGTAILDVLIPPYDEDSGRHCTYYRPEYAGEAT-----PGGAAAAGVXXXXXXXXG---------LVRLVPCP--DEFRVARGEFVSPL 304          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: A0A1Z5JFZ1_FISSO (Cysteamine dioxygenase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JFZ1_FISSO)

HSP 1 Score: 115 bits (287), Expect = 1.220e-24
Identity = 73/189 (38.62%), Postives = 96/189 (50.79%), Query Frame = 1
Query: 1246 IKQFVASLTPQ---SLGLAPDAHERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDA-----GELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQGVAVLDVLIPPYDASCGRNCTYYR 1788
            ++Q  A + PQ    + + P  H+ ITP   PG +RY+H+ +V G YS+GVF+ PP A IPLHDHP MCV+S VLYG L+    D             S     T  G            RRRD+      +LA         AP  + L P + N+HE  AG  G AVLDVL+PPYD    R+CT++ 
Sbjct:   82 LEQVAAGMGPQIKEGIHVRP-IHDLITPSCDPGTVRYIHLSEVEGQYSMGVFIFPPLAVIPLHDHPGMCVLSRVLYGDLQRKSLDLAREQPDEEPETRSW-IPWTRSG-----------KRRRDSDVPKGSKLAYRNRVDNLRAPDCTILFPFEGNLHEFVAGPHGAAVLDVLLPPYDHQHHRDCTFFE 257          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: B7GCS6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCS6_PHATC)

HSP 1 Score: 115 bits (289), Expect = 1.770e-24
Identity = 70/181 (38.67%), Postives = 96/181 (53.04%), Query Frame = 1
Query: 1303 HERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYD-RLE--------NAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSG----------LHPAPYTSCLMPTKANVHELEAGHQGVAVLDVLIPPYDASCGRNCTYYR 1788
            H +ITPP+    +RYLH+ ++ G YS+G+FV PP A IPLHDHP MCV+S VLYG L     D  LE        N+ ++ +   + S+ S+   +           R + A E       G          +  AP T+ L P + N+HE  AG QG AVLD+L+PPYD S  R+CT+Y 
Sbjct:  122 HRQITPPSDDNTVRYLHLSEIPGQYSMGIFVFPPYARIPLHDHPGMCVLSRVLYGSLHRRSLDLALEDEENNDGSNSPTSATSHKNSSWISSHFMW-----------RNKHATETTPSYPWGSKRAFEHRVDILTAPDTTILYPHEGNLHEFAAGPQGAAVLDILLPPYDESHHRDCTFYE 291          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: A0A0P1B525_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B525_PLAHL)

HSP 1 Score: 109 bits (272), Expect = 3.690e-23
Identity = 75/199 (37.69%), Postives = 102/199 (51.26%), Query Frame = 1
Query: 1225 TEDHVEPIKQFVASLTPQSLGL-APDAH-ERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQ-GVAVLDVLIPPYDASCGRNCTYYRADHVQSSV 1812
            T + + PIK     L P++  L  P  +   I  PA    + Y H+ +   ++SIG+F+LPP   IPLHDHP M V+S +LYG L +  YD +    S  SG S L                   ARR     +A         APYT+ L+P   N+HEL  G   G A LD++ PPYDA+CGR+CTY+R   VQ+S+
Sbjct:   47 TSEEIAPIKAICDQLFPENFLLKVPGTNCSEIEAPAC---VHYQHVYENE-SFSIGIFILPPGVAIPLHDHPRMSVISRILYGSLHIKSYDFVNGTVS--SGTSKL-------------------ARRCMDKVIA---------APYTTELLPDCGNLHELIGGDDIGCAFLDIITPPYDANCGRDCTYFR---VQNSI 208          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: A0A1V9Z427_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z427_9STRA)

HSP 1 Score: 108 bits (271), Expect = 4.900e-23
Identity = 78/205 (38.05%), Postives = 104/205 (50.73%), Query Frame = 1
Query: 1204 LEQGTLPTEDHVEPIKQFVASLTPQSLGLAPDAHERITPPALPGN---IRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTI------SGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQ-GVAVLDVLIPPYDASCGRNCTYYR 1788
            +  G   +   +EPIK    ++ P  +GL  +     T  AL      +RY+HI +     SIG+FVLPP A IPLH+HP M VVS +LYG L ++ YD +  AA+         G  S S                   RR+    LA    S +  APYT+ L+P + N+HE  +G   G A+LDVL PPYD S GR+CTYYR
Sbjct:   15 VRHGRALSASEMEPIKALCDNILPIHVGL--EVPTPATAEALYRGSKAVRYIHIYEDCDI-SIGIFVLPPGATIPLHNHPEMSVVSRLLYGSLHVSSYDLVPAAANDAFWAAHDPGEDSPSIW-----------------RRKKKLHLAQQRVSHVVHAPYTTELLPHRCNLHEFTSGADIGCAILDVLTPPYDPSHGRDCTYYR 199          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: G4YJZ4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJZ4_PHYSP)

HSP 1 Score: 106 bits (265), Expect = 3.960e-22
Identity = 63/189 (33.33%), Postives = 95/189 (50.26%), Query Frame = 1
Query: 1225 TEDHVEPIKQFVASLTPQSLGLAPDAHERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQ-GVAVLDVLIPPYDASCGRNCTYYR 1788
            T + + P+K     L P +  L     +    P  P ++ Y H+ +    +SIG+F+LPP A IPLHDHP M VVS +LYG L +  YD +++ A+T +    ++                    R  A E+          AP+T+ L+P   N+H L  G   G A LD++ PPYD++ GR+CTY+R
Sbjct:   47 TREEIAPVKAICDQLFPANFQLKVPGSDDDGAPERPKHVHYQHVYEDE-TFSIGIFILPPGASIPLHDHPGMTVVSRMLYGSLHIKSYDLVKDGATTAAVGKKVT-------------------ARLQADEVLT--------APHTTELLPDCGNLHHLVGGDDTGCAFLDIITPPYDSNDGRDCTYFR 207          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: W2PKA0_PHYPN (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=W2PKA0_PHYPN)

HSP 1 Score: 105 bits (263), Expect = 6.530e-22
Identity = 65/196 (33.16%), Postives = 95/196 (48.47%), Query Frame = 1
Query: 1225 TEDHVEPIKQFVASLTPQSLGLAPDAHERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQ-GVAVLDVLIPPYDASCGRNCTYYRADHVQSS 1809
            T + + P+K     L P +  L     E  + P  P  + Y H+ +    +SIG+F+LPP A IPLHDHP M V+S VLYG L +  YD ++++A+                              RD    A L    +  APYT+ L+P   N+HE+    + G A LD++ PPYD++ GR+C Y+R    Q S
Sbjct:   47 TAEEITPVKAICDELFPANFQLTVPGTEG-SGPDRPKRVHYQHVYEDE-TFSIGIFILPPGASIPLHDHPGMSVISRVLYGSLHIKSYDLIKDSAAP-----------------------------RDKKLRARLRVDEVITAPYTTELLPDYGNLHEIVGDDEIGCAFLDIITPPYDSNVGRDCAYFRVVDSQDS 211          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: A0A5D6Y5D8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5D8_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.040e-21
Identity = 70/193 (36.27%), Postives = 92/193 (47.67%), Query Frame = 1
Query: 1225 TEDHVEPIKQFVASLTPQSLGL-APDAHERITPPALPGNIRYLHI---DQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQ-GVAVLDVLIPPYDASCGRNCTYYR 1788
            T D + PIK     L P    L  PD     +    P  +RY HI   DQ    +S+G+F+LPP A IPLHDHP M V+S VLYG L +   D +  + +  S A+ L                             V A   +H AP+T+ L+P   N+HE  AG   G A+ D+L PPY+   GR+CTYYR
Sbjct:   61 TTDEIAPIKALCDELLPAHFQLKVPDVQPTASLCHKPRRVRYQHIWEDDQ----FSMGIFILPPGASIPLHDHPEMSVISRVLYGSLHVRSCDLVAGSPARTSAAAPL--------------------------MARVCADEEIH-APHTAELLPDHGNLHEFVAGDALGCAIFDILTPPYEPDDGRDCTYYR 222          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: A0A5A9NR67_9TELE (2-aminoethanethiol dioxygenase n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9NR67_9TELE)

HSP 1 Score: 105 bits (262), Expect = 1.060e-21
Identity = 63/183 (34.43%), Postives = 96/183 (52.46%), Query Frame = 1
Query: 1267 LTPQSLGLAPDAHERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSGLHPAPYTSCLM-PTKANVHELEAGHQGVAVLDVLIPPYDASCGRNCTYYRADHVQSSV 1812
            + P+S+   P    RI PP     + Y+HI + +  +SIGVF+L   A IPLHDHP M  +  V+YG ++++C+DRL+       GAS + F   ++ F            +R +    VL   G +    + C++ P K N+H+++A     A LD+L PPYD   GR+C YY+  H  S V
Sbjct:   55 IVPRSIESTPIPPSRIAPP-----VTYMHIYE-SDEFSIGVFLLKTGASIPLHDHPGMYGMLKVIYGKVRISCFDRLDKPR---DGASGVHFNPPLMPF------------QRSSLRPTVLKSVGEYTEESSPCVLSPQKDNIHQIDAVDGPTAFLDILAPPYDPDEGRDCHYYKILHAHSEV 216          
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Match: F1QLC8_DANRE (2-aminoethanethiol (cysteamine) dioxygenase b n=3 Tax=Danio rerio TaxID=7955 RepID=F1QLC8_DANRE)

HSP 1 Score: 103 bits (257), Expect = 4.880e-21
Identity = 63/186 (33.87%), Postives = 99/186 (53.23%), Query Frame = 1
Query: 1258 VASLTPQSLGLAPDAHERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPNMCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGGGDARRRDAGELAVLAGSGLHPAPYTSCLM-PTKANVHELEAGHQGVAVLDVLIPPYDASCGRNCTYYRADHVQSSV 1812
            +A+ TP+S   AP  H+RI PP     + Y+HI +   ++S+GVF+L   A IPLHDHP M  +  V+YG ++++C+DRL+       GAS + F   ++ F            +R +   +VL   G      + C++ P + N+H+++A     A LD+L PPYD   GR+C YY+     S  
Sbjct:   55 IAARTPES---APVPHQRIAPP-----VTYMHICET-DSFSMGVFLLKTGASIPLHDHPGMYGMLKVIYGKVRISCFDRLDKPR---DGASGVQFNPPLMPF------------QRGSLRPSVLKSVGEFTEDSSPCVLSPQQDNIHQIDAVDGPTAFLDILAPPYDPDEGRDCHYYKVLQAHSEA 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2618.7152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP19_9PHAE6.520e-5843.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1Z5JFZ1_FISSO1.220e-2438.62Cysteamine dioxygenase n=2 Tax=Fistulifera solaris... [more]
B7GCS6_PHATC1.770e-2438.67Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A0P1B525_PLAHL3.690e-2337.69Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
A0A1V9Z427_9STRA4.900e-2338.05Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
G4YJZ4_PHYSP3.960e-2233.33Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
W2PKA0_PHYPN6.530e-2233.16Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
A0A5D6Y5D8_9STRA1.040e-2136.27Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A5A9NR67_9TELE1.060e-2134.432-aminoethanethiol dioxygenase n=1 Tax=Triplophysa... [more]
F1QLC8_DANRE4.880e-2133.872-aminoethanethiol (cysteamine) dioxygenase b n=3 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2618contigH-paniculata_contig2618:3773..20614 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score121.7
Seed ortholog evalue5.5e-25
Seed eggNOG ortholog2850.Phatr50059
KEGG rclassRC00114,RC00404
KEGG koko:K00030,ko:K10712
KEGG ReactionR00709,R02467
KEGG Pathwayko00020,ko00430,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00430,map01100,map01110,map01120,map01130,map01200,map01210,map01230
KEGG ModuleM00009,M00010
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Pfam:DUF1637
EggNOG OGs2XGQU@2836,KOG4281@1,KOG4281@2759
Ec32 ortholog descriptionRmlC-like jelly roll fold
Ec32 orthologEc-27_003300.2
EC1.1.1.41,1.13.11.19
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons5
Model size2144
Cds size858
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929782.202954-UTR-H-paniculata_contig2618:3772..39211622929782.202954-UTR-H-paniculata_contig2618:3772..3921Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2618 3773..3921 -
1691481008.2264118-UTR-H-paniculata_contig2618:3772..39211691481008.2264118-UTR-H-paniculata_contig2618:3772..3921Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2618 3773..3921 -
1622929782.3019621-UTR-H-paniculata_contig2618:19400..202081622929782.3019621-UTR-H-paniculata_contig2618:19400..20208Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2618 19401..20208 -
1691481008.2752392-UTR-H-paniculata_contig2618:19400..202081691481008.2752392-UTR-H-paniculata_contig2618:19400..20208Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2618 19401..20208 -
1622929782.319208-UTR-H-paniculata_contig2618:20285..206141622929782.319208-UTR-H-paniculata_contig2618:20285..20614Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2618 20286..20614 -
1691481008.2835999-UTR-H-paniculata_contig2618:20285..206141691481008.2835999-UTR-H-paniculata_contig2618:20285..20614Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2618 20286..20614 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929782.2225058-CDS-H-paniculata_contig2618:3921..41991622929782.2225058-CDS-H-paniculata_contig2618:3921..4199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 3922..4199 -
1691481008.2368238-CDS-H-paniculata_contig2618:3921..41991691481008.2368238-CDS-H-paniculata_contig2618:3921..4199Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 3922..4199 -
1622929782.241044-CDS-H-paniculata_contig2618:13708..139861622929782.241044-CDS-H-paniculata_contig2618:13708..13986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 13709..13986 -
1691481008.2443175-CDS-H-paniculata_contig2618:13708..139861691481008.2443175-CDS-H-paniculata_contig2618:13708..13986Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 13709..13986 -
1622929782.2607713-CDS-H-paniculata_contig2618:18460..186451622929782.2607713-CDS-H-paniculata_contig2618:18460..18645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 18461..18645 -
1691481008.2518523-CDS-H-paniculata_contig2618:18460..186451691481008.2518523-CDS-H-paniculata_contig2618:18460..18645Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 18461..18645 -
1622929782.2829723-CDS-H-paniculata_contig2618:19283..194001622929782.2829723-CDS-H-paniculata_contig2618:19283..19400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 19284..19400 -
1691481008.2655985-CDS-H-paniculata_contig2618:19283..194001691481008.2655985-CDS-H-paniculata_contig2618:19283..19400Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2618 19284..19400 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2618.7152.1prot_H-paniculata_contig2618.7152.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2618 3922..19400 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2618.7152.1

>prot_H-paniculata_contig2618.7152.1 ID=prot_H-paniculata_contig2618.7152.1|Name=mRNA_H-paniculata_contig2618.7152.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp
MERTPSIEELIRIVSNITSSIGLEQGTLPTEDHVEPIKQFVASLTPQSLG
LAPDAHERITPPALPGNIRYLHIDQVAGAYSIGVFVLPPRACIPLHDHPN
MCVVSHVLYGVLKMTCYDRLENAASTISGASSLSFGSTMLGFAGGLGFGG
GDARRRDAGELAVLAGSGLHPAPYTSCLMPTKANVHELEAGHQGVAVLDV
LIPPYDASCGRNCTYYRADHVQSSVGLGGLAGGGGSWGTGAGGRSAGGSN
NATQGAHVVRLVPCTSGDNYAVVSGEIIAPLNYDT*
back to top

mRNA from alignment at H-paniculata_contig2618:3773..20614-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2618.7152.1 ID=mRNA_H-paniculata_contig2618.7152.1|Name=mRNA_H-paniculata_contig2618.7152.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=16842bp|location=Sequence derived from alignment at H-paniculata_contig2618:3773..20614- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTCTAGTCAGAGGTCTTTTAGTGGGTGCAACCCCCACACTGCCTACTTG GTTCAGCCGAGCCGGGGTGGCGTCTACCCCGCAGAGGAATAAATAAGTCT ATTCTATTAAAGGAAATGTAGAAATACTTCGGTAGAAATACATGAAGTAT GGAAGCCTCGGATAAAGGTTTTTGCCGTAGCCTTCGGGGGGTTAAAAAAA AAGGAACAAAAGAAAAAAAGGTGCAACTTGCTCCTTCGGCAGTCGCCAAC TCCCAAGTAGTGCAAATTGAATTGATCCGGACGAGGAAAAAAATAACATA CTGCGTTGTTCGATGGTTGCATGGTAGGTAATTAAAATGCCCTTACATCG ATACCGTGTGTAGTCTTCTATTCTCCACCGTTCCACGCCCCCCCCCCCCC CCACCCCTTCCCGTATAGGCCGCCATCTGCGGATATCCAGATTTTCACAG TTGACAGACAATCACATCTTGTTTCGGTGGGGTCAGTTCGATTAGCAACT GTTGCACGACTACGGGTCTGAGATACTGGATAAATATTAAGCTAAAAACG AAATATGAGTACGATCACTCTCACACCTCGTACAGCAGCCAGTTGTGCAT TGGCACCTAGAGAACGCTGGGCACCATCAGGTATTCTCGATTTGCACCAT ACCGTTTGCGGCAGGAGTATTGTGCGAGATACCAGATGGCACACTCGATC CTCCCAATAGGATTCTCACTACAGTGCAATACCGCGCTAAATCAGTATGA AACCGCACTTGAGTGTGGTCAAAATCGGCTTGCATTATACAGCCCTTAAG TGGGACCCCCACTGACTGTATCTCAAATCCCGAAAGATATTGTACAGGTT CCGCCGACGGTCGTTCTTGATTCTCGATCCGTCATGTCGTCGTCACTTAA ATTGCATTTGGGCTCTATGGCCGCTGCGAGAACGTCTTTGACCAATCACA GCACGTATTAGTCACACTCAGAAAAAATGTGCTCTTCGAAACACAAACGG ACTTGATCCCTCTCCCCCGTCATGACGTCAAAGCTTCAAGCAGGTAGTAG CCGAACTGTAGATCTCTAGTCGCGGAAAGCAGGAGCAGGTACTATAGCAC TATTATTGGACAACATAGGATCGCGGCGTACGCAACAGACAAACGAACCG CATTGTGTTTTTTTAGCTTTTCACCTTCAAAGAAGGAGAGCGCGAAGTGT CAAGGAGCCCAGAAATGGAGCGGACTCCGTCAATCGAAGAGCTGATCAGG ATTGTGAGCAACATTACCTCGAGTATTGGGCTGGAGCAGGGAACACTCCC AACGGAAGACCACGTTGAGCCCATAAAGCAGGTGCGTGGACCTGGAATAA AGGCTGGATTTTTGCGTGGTTGCACTGCGCGGCAGAGAGTCCAACGAAGA GGCAGTGCTGGTCTAATGCGGATTTGCGCGGGTGACAACGTGGTGCTCGG ATTTTTCGTAGACAAACTTACTGGTTGTGAACGTGTGTAAAATTCAAATC GTTGGCGAACAGGCTGGATGATTAGCGGGTGGGACACCTTAGCATTAGGA GAATTGAGAATTTCCCCGGGGCTTCAATAGCAATCGATTGGCGGAACGAC AAAGGGGGGAACGGCAAATTCGATTTCCTCCAGCGGGGTGTTTGTGATCT GCAATCATAACTGAGAACAGACCATCAGGGTTATTGGACTTCTGTACGCA GGTTTTGGGATGTCCATCACCTCGCATCTTGGCGCCGCTGAAGAGGATAA AGGCAGGTGGCAAAAGTTTCTCCCAACTTCATTTTTCTGAAGAATTGATT GATCTGCCACGTTGCAGCTGCTCAGGGTTGAGACGCATGTGTATGTAGTG CTCTCCAACCAGGATTTGTATCTTCTGTTGCCTCGATGTCTATATACCTT CCTTATCACAGACAGGATACCTCGTTCGATCCCATGTTTTTCGCCTCGTT TTATCGCTGGTTCGCGCAGTTTGTGGCGTCGCTTACACCGCAGAGCCTGG GTCTTGCGCCCGACGCTCATGAGCGCATTACACCCCCAGCACTGCCGGGG AATATACGGTATTTACATATCGACCAAGTGGCGGGGGCCTATTCGATCGG AGTGTTTGTGCTGCCTCCGCGAGCGTGCATTCCTTTGCACGATCATCCAA ATATGTGAGAGCAACCGAAAAAACTACCATCGCAATAGACGGTACAGTAG TTAGTCGGTATAACACCTAACTTGCGAACTGACTGTGATTGGCTTCAGGC TTGTGGCGAGTGGACCATTTCGTCTCGAGTGACACATGAATAGCCTCATT TCTTGAAGGATGTCTTAGGTTATTGCCTTGTTTGTCTGTTCTGCTGCCTT CGATGAGCAGAACAGTCAGATGTTGAGCGAGTGTTCGGCGGCCCCCCTGT CGTTGCGTAGGTCAACACTCAATTGGTCGCAACTTCGTGGGCAACGACCA CCAACCTCATCTGGCTGTTGCCGACTGTTGCCGACTGTTGCCGACTGTTT TTGGCTGTTGCAGCCATTTTCTTTTCCAACTTGAGATGGCGTGTGCATGT GAACCGAAACATTGAATGACCTTACACAATGGGAGCCAACACGCACTTTG TTGAACTAGTATACGTGGAGCAACATGGTATCTCCGTTTAGATATCTCCG GCCTCTTTTGAGTAGTTGAATGTGCACTCCATTGCTGTACCTGGGCCAAT GGCCAATTACCTTTCCTGTCGTAGCTGGATCCGCATGTATGTGGGATACC GTAGTTGGTCGCGGTGAATTCGTGAAAATCCTCCGCGCAGTCAGTCCCCC CGAAGAAAACGACGATGCGAATATTTAGGTGCGTGGAAGAAGAACCAAAC GCAACGTCAGCGATTCTTTGCTGCTGAAACTTTCTGTTGGACAGGTGATT TTCCAGTCACCCTGAAGGATGTGGATCATACAATCCTGTGATTATCGTTA AACAAATCTGTTTGTAGTTGAAAACATCTTGATCGGGTCATGAACCAACG CTCTTCTTCACATCTCCTGCTCTAGATTTGTATAAGGGGCTGTTCATCGA TACTTCTATTCTGAATACGCACCCCCGGTTGTGCCTTCGTATGCGTTATG TTACTTGGTAACACACAGGAGTGAAGTGGAAATGCTCTCTACATACAGTG TAGCATGGCCGTCTATTTCTTACACTTTTATGGCTTGTCCTGGGTCCGGC GTCTTGTTTTTAGTCGGGATTCTTGTGACTTTATTGTACCGTACTGAACC TTCTGTTGAAACTGACAAGCCGCACAGCAACGGCCCTTGAGCAGGGTCAT GCATGGATCGGGAAGTACATCACTCAAAAATAGAGTCAAGTACTGTTACC ATGGTATGGCAACCATGTCTGCTTTCGATACGCGGGAGCACCACTGCTAA TGCCAGATATATCTCGTAGCCGCCAAATGAGATACTACTCAACATTGGTA CGTGCTTGGTGTTTACTGTATATCGGAGAAGATTCGAACCAACGTTCAGG TTCTTTTCAGCGCCGTCGGCTCCTTCTGGCGCATGTGCCTTGTAAGTTGC CTCGCACCACACTGGCCTGTATTTGCACACCCCTACCGATATCTGCCATG TTTCCATTCCTAAATATGTATCCATCACGACCTCTGAGGCATTATCTTTT CAACGTTCCCTTTTTCGAATTAGTAGTTGATACATTGCGGGATATTGGCG TTGTGTGAGGTAGTCTGCAGCAGCATCCGTTCTTTCACATGGCCATACCA TCACTTATATGCGGTCTGTACATTGAGCCAAGCAGTGTTGATGCATTGGA AACTGACTGTCGGGATCCTGATGAATAGTTGTCGAAATGTGTCGTTACTG CTATCTGTCTGTATATATCGGGAGTACATAAGAGGACATACAGTTGTACA AACAGTTTACCAGAGGCGGCTTTGAAGTAGCTGTGTTATGGCTTGGTTTT ATCGACCACTGAAAGAGCGGATGTTGCTTCGTGTACTGTCGTGTGCATAT TGGAATAGCAGCAGACCCGCCTCCAACACTAAGTCCGCTACCCTTTGTGA ACAGAGACTACGATGCTGCTTCCGCCGTGCATACAACATGCAGTATGTCC TTGACAACCGAGCTTAATTATTCCGCAGTGTTTGTTTTGCCGGAACCGTA TCCTGCTCCCAAAACCAAGCACTGCGGAAAACCTGTGATGGGGACCGGGG GGGGGAATTAGATCACAAACTGAAACCTGAGTTCCGTAAACTCATCCACA GACTTAGAACACCTTGGGGGAACGCTGCCACCACCGTTGTAGGTGTTGGT GCGATCATGTTGGAGAAGTAGAGGTTAATGTAATCTGCCCGAAAGCTGCA GTATAAAGGTTGCGTCTCCCGTGCTCGAAGTGAAAATTGTAAATGAGAAT TGGGAACGGTTCAGGTGCATTCCACGACTCGGACACTATATATATTTTTC ATTTTTTCGTGGGCCGCACGAAGCACGGAGCACCAAGAAAAAAGCGAGTC CATGTCAGCCTCCAAATCGCTGCGAGGATCGATTATGATCACGGGAAAAA ACCCCGAGAATACATGAAAATTCGTCCAGGCAAAACGAAACAAAGTAACC AAACCGTGTACATGTATCTTATGTACATATATATATTCCACCAAGACCTT GTTTATACAAAGTGTCTTCTCGTGAATTCGTGCACTCCTGTTGTGGAATG AATTCGATAATTCCGTCTTCCTACAAAGGGTAAACTGCCGCGGCATCGCT GACATCGGTTCAAGACCTTTCGTTTGGGAACAACTTCGCGTTATAGGTTT GCAATAAGATTCGGGTTTTTATGTTTCGCACCAGGTTCCCGTTGTAGAAA ACCGAATGATCACCTGTGAAGACCGGTCGCGATTGCCCTGACAAGTGTCC ATCCCTACCCTTGTGCGTGTATATAGGATCTGTGCTTGAGAAGGATTCTG TAGAACAGAGTACCGTGATTGTTGGGCTTGAGATTGGGGTTAGGGTTCAG GTTCAGGTTTTAGTTGGGTCTGCTCTTATCGCGGTGAACCATGACCAACC GTTCTTTTTCCGTAGTAATCGCTCCGTCCTCCACAACAAGGTTAACACAG ACCAGACCAGACCAGACCAGACCAGACTTGAAAAATTTAACAAGAATTCG CGAGAAGCCCGCGGCTAATTCGGGCTATGGACAACAAAATGCACGTTGTC GGGCCACGTCACAACGACAGGAAGCTGGCACCAGCCGCCTGCCCGTGGGA CGTTCCGACTTAGGTTGGATCAATAGGTGCATGTACATGTACCGCGCTTT CAACCATTCCAACAGGTCCATCCGTTGCTACAGTTTCCTGGATTCTCCTG TGCGGGAGAGTTGGCTGAAGGAGGGGGTGCTGCGGGAAACACCAGAGGAA GCAGGCTGATGGTGGCAGTCGGCTTACCGTCGTTCTGTTATGTTATGGTT TCAGTGATAGATTAAGACATGAACAGCAGCAGCAATGAAAGAAGGAAGCT GTGTTGCGTGGATCCAATTCTGGGATAGCTGGGGTTGACGAGTGTGGTCT GAATGTATCTGAGAGCCTGCTTGTCTCGTCAAATTTTTCCACCCTAATTA CATCTCATCTTTTGTAGTGGCATATATCACCCATTCGTTCCGTTCCCCTG ACTCCCATGCCGCTTTTCGGAAAATTCAATCGTGGTGCTACTGCGGTAAT TTTCTAGCCCAACGACTCGCTTTATATGTTCCTCCACGCCTAATCGCGTA GGGCAATGTTCGACTTTATCCTCCGAATGGTTCATTTCAATGCTACACGA TGATTGGAACTTCAATATACATTCACTGCCGAAAATACTTACGAAAATGC CGAAAAAGGGACTGATCTTGTCGGGGCAACGAGATGTCGGGTTTCATCCG TCTCCACGCGGTGTGTCCCCATAATCGACAACTGATCTTTCGCCGTGACT CATCATCACTGGTCCCTCTCATTCTGTTTCTCTCTTCGAGTGTGTCTGTG TTTTGCCGTGTTGGTTGTTGCAGTCGCAGCCAGAACGCGAGACGTCGCTA GAGCGAGATATGAAAGCTGTACACAAGAGAGAGCAAGCTCAGAAGAGTTG ACCCGTTTTTTTATTCGTTTGTTCTGTTGTGTTGCGTTTTCGGCGCCCAT ATCTAGAAGAGTTACCCTCATCGTATGATGTCATTGCCGGGATGTCCCGC ACCTGGGTGAATCCCTAAACTCTTGACCTGCTTGTCGCTTTTTCGCACCC CGTTATGATTTCAAGCCTTTTTGACGTCTGTTCTTTTTATCTCTTAATTT CCCCACGCCGCCACAACCACAAGACTACTGAACCCACCGTCACCAATGAC GTTGAACATTCTATTTGATCATCACGTCGTTTTCTCGTCCAACTCCTATC TTGCGTTGGTCGCATTTGAGGCTCTTTCTCAATCGACACGGTGCATGGGT CTCTCAATACCATTTCACCCCCTGCATCCCTCCGCTCCCACATTTTGAAA GAAAAATGATTGAAGTACCTTCATGCCCTCCCCGTTGTTTCCCCTGGCCC CTTCCCCTTGAGCACATAATTCATTCCTGTTCCCCCCCGCTCCTCCGCCC GTTTTTTTTTTGACCACCTGTTGTGAAGGTGCGTTGTATCACACGTTCTC TACGGCGTTTTAAAAATGACCTGTTACGATCGCTTGGAAAATGCGGCGTC TACAATAAGCGGAGCGTCTTCTTTGAGCTTTGGGTCCACTATGCTGGGGT TTGCGGGGGGATTAGGATTTGGAGGAGGAGACGCGAGGCGCAGGGACGCG GGGGAATTGGCCGTGTTGGCTGGGAGCGGGTTGCATCCTGCGCCGTACAC GTCGTGTCTGATGCCAACCAAGGCCAACGTGCACGAACTGGAGGCCGGAC ATCAGGGTGCGTTCAGTTCAATCTCATATGATGTATTTCTGATTTGTCAC TGATTCATTTTCTTGTGGTGAAACTATCAAGATCGGCCACTAAAGCATGA TCGGTTACCAGAACGCTGATTGCCGCTGGTCATGCTTCCACAAGGACAGA AAAACCGATTTTACAGGAATATGCCAGGGAACTAAAAAAAAAAATGTTGG ACACGAGAAACGTTATTCTTGTGGTTGGAAGCCAGGCCGCACGGCGATGA AAGTACTGCCAAGCCCCTTAGTATCAGTAGTGTTCACCACCGTCTGTTGA AGAAATTTCTTGTTTTCACTGTAGTTTTCTACTGCCCGACCTCTCCACCA ACCTGGCTCTAAGGTCGTCGCCACGCCGCGCAGCGGCGCAGCATTTACGC AATTTTTTTACGCTTCGGGGAGCTGATGTAACCGTCGAAATGATGAACAA ATTCTCATTCGTGTCGACCAGGCAGTCAAAGGCGATTAATTGCAGCGTGT CACAAAGAATCGCAACGCAGTGACTATTCAATCACTCTGGCGTGTCCTAC AAATCGTATTCCCCATCCCTCTTCATCTACTGAACCCCGTACACTCGATC TGGGTATAATCAGTTTCCAAAATAATAAAAGAAAACTAGGGAATTTCGTG CGCAACCCGTCAAAATCGACATGGTCAAAAGCGATGCTCTTTGGTAATTT CATCTGCACCTAAAATTGCTGTAGCTCCCTCAATACAGGGTCGATATCCG TCAAACAAGGCATGCCGGGTGCAGCTAAGCAACGTCTGTTGTGTGCGCTA GCGCGCATGTGTTCCGTCTCTCTGCGCGTGTTTCTCAGTCCTACTTTTCT AAAGACTGCGGAGACCTCTGCTGGCCTCAACCATTTTGGAACAATCGGTA CACCACCTGTATATCCCCGGGATCCTATGTCTTTTTTCTCGATAAGACAC AAATATCTATTATCGCCCGATATAATGTGGCCAATAGAGAGTTCAGGCAA AAACAATTTGAACTTAGGATTTGACCTAGCTGCAGGATTTTAAGGAGACA TGAGGTTTGCCCCTAATTTCAACTTAGGCCGATGACTTGAGCACTCTGAG TTGGGGAAATCTATCGATGATTCTCCTTATATCTCAGGTCGAATTCGGGT CGGATGAGGTAGGATTATGCAGGTAACAAGCCAAACGGCCACACCACATA TGGATAAACAGATGCTCATCATAGTGTGCTCAATTCGCAATTGGCAAACG GACAGTACGTGCACAGCAGTCTGTCCTGGAAACGCAGGCACCGTAATCAC AACAAGATCATCGTATAGGTCTTCAAAATATTTCCGGCGACAGGGCACAG GTCGTAGCACCGGTCGAGGAGGTGTGGTTCCTCCAATAAGGCAAAGGGAT TACCCACCAATTGCTGGAGAGCCTGGGTGCCGAGTGTGTATTCTCATCCA AACAATAGACAGCCCATCCAATTGTATTGAGCTGACTGCCTCCTGTCTAA CTTTATATAGTACTTGGATACAACTGATTGAATTAGACCATCGTAGACAT GAGGAGTGCGCTGTCTGTCTGTACAAACCACGAGTACAACAACGACGCAG TCACTCGGTGCAATTTAACATGTGAACAATTGTCCGTTTATCTGTTTTAT CTGTTGGTTCAAACGGAAGTATTCTTGATCACAAGGAGCCAGTAAATTAG TGCTGTGGTGTGCAGTGGTGGTGTGTATACGATTGTATAGGCGTTCGCAC CCATCTCGTCTCTCAGTCAGGAGTTGATGACGTCGTACTTGCATTCGCCT GTTTCCACACATTGTGTCGTACCGTGTACAGTCTACCTGCTTGTCAAAAT TCGCTTGTAGCCTACAACCTTGTCCTCTGGGCGTCGCAGGTTCATGCGTT GTTTTGTGTTACCGGTTGTGAGTATAGATGCTCACGTCTGATTGTGCAAC TGTAATGGTGTATTGTGACGAATTTCGTGACAATAGGCGCGGGGGGCTAA GCTAGTTGAATTTGTTACGTACTTACTATAGTCATCAGTGGGTGGTTTCT TCTGGGTCGCATCGTCCAGGGGCCTACACCAAATTATTCGATTCATGGCC CACTCTTTCATTCTGGGCTCTTGGCTCCCCCGCACGCGTTACTTGCACCG GTTCACGAGTTTTGACATAATGACGACCACGCCACAGTCGGTTCCACTGC GTATAAAGCCTAAGAACGTTAGGAACGTTCGCGAGCTTTCTGGACCCACC GTAGGATTTTTCTCAAACCTAGGTTCAATCCTAAGTTGACAGAAGGACAA TTGTCGCAATTTTCCAAGAGCAAAGGACAGAAACAGTCGTAATCAGCTCC TCTTGGGACCATGAATAAGAGTTGGGGGAAATATATATATTTCGGACAAC AGAGGGCCAGCACCCCCAACACAAGTAACAGCCTCCTTCGCGGGGGGGGT ACGAACATGAACAGATTGCTGCGTTACATGTCAATATATATTGTCTGGGC ATTCTGTGTCACCTCTCCGTTGCTCCGAAATATCGACATTGGCGAAGACG GACGTCGGGAGTTGGTAGCATTTCCCCAAGAGATCTGTAGCTGTTGCCGC TGTACTGTACGGTGGGCTGCTGTGCGTGATGGTCACCAGCAAAGCAGAAG GCAGCAGCCTGACTCAAATCATGACATCACTGATAAGGCCAGTGAAGTTT ACCCCAGTTTACCCCAGTTCACCGTCACTCTCCGAAAGTCATTCTAACTT AGTTTCACTCTGGCGGGCAGCGCAGTAGAAATTAGCGATGTTTGTCCAAT GCGACGGTTGCAACCGGAATAATAACTGCTTGTTTTTACAGTGGTGTACT GCCCAACCCCTCCACCAACGTGGCCCCAGGGTCCTCAACACGCGTTGCAA GGGTGTAACGTTTCGGCAATTTTAGGCGCTACCGGGGCACCGCCCCTCGA TGAGGCCAAGTCTCATCAAGAACGAAAACCGATATTAGAGAATGGGCAAA TGACAGAAGCAGCTATAACCAATCCCTCTTTGGACTAAAAATGATTGTAG GAAAACACATTTCCGACAAAAGTGCCAGCACCCCCCAAAAAACAACCTCC TTCGGGGGAAGAAGCCGCATGCCTCATGGCACCATACCCGACCCATCTCC AAAGCTTCCAGCCCCCAAAACGCCGCTCCTTCTCTATCATTGTCACAAAT TCGGGTCGAATCATACGGGTGCCTTTTTTAACCGTTTCTGTCCATATACA TCGACCGGTTACATACCACCCGACGAGACAACTTGGCTTTCAACCATTTT TAGTCGAGCCAGAAAACCATTTTGTCAGATTTCTCGAACTGTTTCAGCCG TGGTCACAACCGATTTAGTCCGACAGAGACACACCGTGAAGATTTGGCTG ACTGCCCAACCGCAATTTTACCGAGATCGGCTGTCGGGGGTAGCAAACTG CAGGCAAGTGATCAGAAAAGGAGCACCACGCCATCCAACGTTTCTTGCTG CGGACCGTTGAAGTGGGGTCCAACCCCATATGCCTCTCTCTTGCACAATA CACGCGCCACTGCACCGCACATCTTAACATGTTAGTCGCAAGCATGGCCT CTGCCAAGATCCAAATAGGTAACAAGGAACAACATGCATGTGTCTGTGCT GTACGGTATGTGCTGTCTATACTGAACTGCCTGCATGAACGGCGCGACTC CTTACGTGTGCCCGTAATTATGCAATATATATATATATATATATATATTG TTATTTCCTGTGTTTTAGGTGGTTATCAACCGGTGATTAGATGCGGAGCC CTGCGTTGAACTGGTGAACACTCCACTACTCGTACATGGGCAGTAATACG GTATTACATCCAGTAACGTCATACATCGAGAGAGAACCGAAGATATAAAC CATTCGATAACGAATAGATTCGCACTGCTCTTGCAGCAAGAAACGTTGGA TGGCGTGGTGCTCCTTTTCTGATCACTTGCCGGTAGTTTGCTGCCCCCGA CAGCCGATCTCGGTAAAATTGCGGTTGGGCAGTCAGCCAGATCTTCACGG TGTGTCTCTGTCGGACTAAATCGGTTGTGACTATGGTTGAAACAGTTCGA GAAATCTGACAAAATGGTTTTCTGGCTCGACTAAAAATGATTGAAAGCCA AGTTGTCTCGTCGGGTGGTATGTAACCGGTCGATGTATATAGACAGAAAC GGTCAAGAAAGGCACCCGTATGATTCGACCCGAATTTGTGACAATGATAA AGAGAGAAGGAACGGCGTTTTGGGGCTGGAAGCTTTGGAGATAGGTCGGG TAAGGTGCCATGAGGCATACGGCTTCATCATCACTGTACACAACAGCCAT CGCGATAGCATGTTGTTCTTAGGTCCGTGTCCAGCTGACTGCAAGTCTGA ATTTTGGCCCATGACTATTGAAGTTATCAGCAAAAACGAAAAAGAAGTGG GGTTGTAATATTGAAAGTTGTTGCGCCGCAGGCATGAAATGCAGCAAAAA CCCTTTTTCTGTTCCGAGTATCTTGCTTTATGTCTTATCGAGCAGACCAG CTGTGTCTGCAGATGACGAAATTGTTCTGAGCGTGACCGTTACAAAGTCG TTCGATGACCAGGCCGCGAAAATGTCACAGCTGCAGATAATCCCCAAGAC AACATGCACAGAGACACAGGGGACACGCTCGCTCACTATCTCGGATAATG GGCCTTGCTCAGCTGGACGACACGCCGGTCTTTTTTTTTTTCGTGGACCC GTTCTGTGTTGGAGAAAATTCGGTATTTTCACGTCGAGTTGCAATTACAA GTTTCCTGTGTGTCTGTGTTGTCTGTCTATGTTGCCCCCCCGCGCACGTG ACAACAACCTGTTCTCCTTCATATCTGAGCCGATAATACCCAAACCAAGT GTATTGTGCTCAATTGATGAATAGCTACGGCCCGATATACATTTTATTGT TCGGGGGATAGTAAAGTTCTCACTCTCACGACGGTTTAGTGCCGGATTCG ATTGCCACCCGTTTGCAACACACGGCCTTGGGTCGACACCTTGGGCAGTT GGTTGTGCTTGGTCGTGCTTGGTCGCCATGGTTTTCCAACTGCTCCAATC ACAGGCATATATATATATATATTTATTTATTTTGGTATCCGCAACGGCCA CTTCGTGTATCACAAGTTCTGGGGACTTTTTCGGAAAATGCGGTGCAACG TGTGTTCCGCGCGAAAAAATGAAATGTTTTTCAGGTTGGTTAAAGATTTG CTGGGCCAATCACAGAGCAGCTGGGGGTTACGTGGTCCTCACACATCATG AGCCTAGGCAACGGTGACGTGGTGAGGCCATGTCTATCCAGAGCAAAAAA GCATTGTGAGCGGATTCACCACATAATGTCTTTTCAGGCGGGAGGGTCCA CGATTTATTGCGAAACTGGTCCGAACGCTAGCTAGCTGCTGATCACACCT TTTCAATACTAAAAAAACAATTTCACAGTATTTGGCGAGAAATTGAATTA AGACTCTTCAAGGCAGATTTGGTGGTCGTTGGTGGGCACATAATCTATTC TGTAGAGGAACCAAAGAACAATATGAAGGCGGAAGTGCTCACGGTTGCCC TCGAGTGGCCAAAGGCAGCCAAAGACAGCCAAAGGCGGTGAATTGCAAAA TGTGGCAAAGAAACGCAGCAACAGTGATCGTAACCACCATTCTCCTCCGT AAAACAAAAGATAGGTCGGGCTATAGCTCTTTATCGTCTGAATCCCCACA TACCTGACTTGGGTGGAATCAGCTAGACGTGAGCAACAATGGGTGTGCTT CATGGGCAAATAAATGGCCAAGACAGACATGGTCAAAAGCGGCAGTTATT GGGCAATACTTGAATCCGCCCCTGCTCTTCCCATCAAAATGTCATACAAA AGAGTACATTTTCCCGTTTTTTTTTACTACGAGTCACTTTTTTGTCCTCT TTTCTGAAATGAGAACATCGAAAATGGGGATTTCAATTTTCCATTTTCAT TTTGGTCCCGTAAGAGTTGGCCTAAGACACGGCTTGAAAGCAAAAAAGAA ACAAAAACACAAGAAATCGGGCTGTAGGTTGTGATCTGATCGGCAGTTAT TGCCGCGCACGTGTGAACGCAAAGAGAAAGAGAGAGAGAGAGAAAAAAAA TCTTCCGAAAAGCTTGCACCGGAAAAAAAAAGAGAATGTTGAAGAAGAGA AGATTAGAAAGTTAAATCGAAGCAGCAAGAAGGCGGCCCAAAAAATCTCA GCAAACCAATCCGTGCCTTGTTTTACCAGGCCATGTTTTATTCAGAGTGA AAAAAAACGATCCTCGCAGAATTGGGTTTTGACCTGGTTAATCAGGCAAG AATCAGCCCTTATGTCTGATTGAAAAGTGGATTTGGATCCCGGAGATGTC CTGGTTTGTACTGACTGTTGCCAAATGGTCGAGGTTGGCCCGGTCCAGCA GATTTCAGAAAAACAAGGACCCAGAAACGTTCAACTACAGAGAGTCCCAA AGCAACACAGAATACAAGATGCAGAGAAGGACAGAGCACACGCGGCCTAG TGTGCAGGACAGGACTTAACTCAGCTGAATGCGCTACGCTTGACTTGATG GAAATCCAACATGTATTGGTCGAGGTACCGTACAGAATTCATGTGTCATC TGATTCGTACAGCACCCACCCTGTAGACACACACCCCCAGCAGACGCTCA GCGCCCCAACGCATGGCTACAATCCACCAAAACCCGGATTACCTTGATTC GTTACCAGTATATCGATATATAGGGCGAGCAATAGCAATCGCGGAGAATT TTTATGCTCCTTCTGGCCCAGAAATCATCCAGGTGCGTATCGTTTTGGCT TTCTGTTGTCATAGTCAAATACATCTCCTTCAGTTCTTGATAGGCTGGCT CACTTCACACCAAGCGCATGGTGCGTGGTCGAGTAAGAACTACCTCATAG ACCATCCGACACTGTTTCGGAGGCAGTGCAGATTTTGCTGCCAACTTTTG AGCCACTTGGGTTGGTTGGGGTGTTGGTTTTGCTGTTGATTATTGTCGAC CGTTTCTTCATATCACATTTTCCTTCCGAGCCTGTGGCCCCAGATCACCA ATTCAACTAACTGCTCAGCTACGGCCCGAAATACGTTTTGTTGCTCTGGG GAAAGTTGACGCCACCACTCTCACGATGGGCAGTGCGGCATTCCTGTCAC CCGTCTAAGCAATTCACCGCCTTGGGTTCGACGTTGGGCCCTTAGTCCTG CTTGATTGCCATGTTTTTCGAACTGTTTCAGTCAGGCCTGTTTGTTCGTT TTCATTTTGGACCATTTAGCTTTGTTGAAAAAAAACAAAAAAACTTCGGG AGTTTAAATAGAACGGGATTCATTAGAGGTCGTGTGCAAAATGATGAAAA ATCTTCACGATAGTCCAAGAAACACTCGACCGATCGTAGAGTAATTTCAT TTTGTCAGTTATTCGACAACGCACGGCCTGAGCCACGCCCCCACCGGATT ATAATATAATATCCTCGTGAATCCAATTGTGAAGTGTGCAATTATGAGCA CAACAAAAACATCTGGCAATTCAGATCTGGCTACACGTCCACGATAACGA TGGGATCTCGCTTTTTCTGCACAAGTATCCACTAGGGTCTCGCCTCTTGT ACCGAAGGCTATGGTTGACTGTACGAAAATCAGCATAGTTACATGTGGAA GAGTCATCATGACGTCACCATCGCTGAGTAGTTCTGACCCATGCGCAGCA CGCGCTTTCGGCATTGTTTTTGCAATGGGAATAAAAAAAACACAAACATG ATGACGTCATGCTCCTGAGCCGGGCCTGGCGTGCGAACTACACCATTTTT TCTCTTTCGCCGATTTTTTACCTCTACTACTGCAACCTCCACGTTTTTTG CGTTGGTCCTGATCGCAGTGGGGCACAGCAAGTCGTAAACGAAACCGTTC CATAGGAAACCGTTACAAAATCAAACATTTGTCGAACCGGAGCAACTTCG GTCGAATCGCAACAATTTTTCACACATATCTAGAACTGCCTATACATCTA GAGCGTCCAAATGTTACACCGTGCTGTCATAGCACAAAATCCCCGTGCGC GAAGTAACAAAGAGACTTGGTACATTGGCCTCCAAATTCTTTTGGATCTA TCTACGGGTTACGAAGCAATGATATCGCGTAGCTAAGCTAACAAAGTGAT GGTGTTTAGGAAGGATGGTTGGGCAGTAACGCTCAGGAGTATGCAAACAG GCAGAGGCAGGGCACAAGCATTGCCCATGGAGATAGAGAACAAAATGAGC ACATCGGCGTGTTGAATTGTGAAAGATTCGTTTTTTTGCGTTTCACCTGT CGGACCCAGACAGGAAAAGGCATCGAGATGAGTCGTGCCATTTTTTTTTT TTTTCAAGCCGATTAAGAGATGGCCTGATTAGGTGCTGTCTGTTGCCGCA CACACACACATGGTGTGGACTGTGTGTGTCTTTTGGTGACGGATCAGGGT AAGTGCCGGTTCTAGAATCGTGGAAGATGTGGTGTTTGATATCCATGGCT CCAATTGTTTCAGAAACACCAGAAGTGAAGTATTGTAGGGACCAGGCTGG CTGGGGTGTGGGTAATGGACAATGAGGATATAGATGTTTTCTCCCCCACG TAAACTTGCTGGGCCTTGAAGTTCTCTCGTAAGCTCCCGAGACCGTCCTC TCTCTCTCCCTTTGCCACTTCCCCTTTGATGAAAGATGGTGACGAGTGCT GTGTTTAATCGCATCATAGAAAAAGAGCTCAACACCTCAAACAAAAAATC GGCTACGGGAAACCCCGATCCCGATTTGATGTAATTTTGCTGGAAAGTAC CCGCAATCGACATTTGAGCCCCCGGCCTCCCTTATGCCAACCACCTTCAC TCATCAAGTACCTACATCATGTCATGGTGTCCACGTACGATTGGGGGGAC GTATACGTCATTTAGGAGTATTAGTTGCCAGCATGGGATGCAAACCAAGC CAGTACGCAACCGATATTTATTCACGTATCGGTTCAATGCAACTATGAAC ATTTGAGACCTCGTTTGGTGATGGTCTGTCTTGAAGGGATGTGTGGGAGA TTTGGGCTTGAACCGCACCAAAGACCTTGTTGTTTATTTATTTTTTTGTC GTTTTATTCACACATTGGCCCGATCCCTTAGACACATCGGCGCAGGGTAA ATGCCGATCCTGTGAAAAAGTGCAGTGGTATATCGTGTAGCATTATGAGC ACTTATAACGAATAGAGAGCCCTAATACAATAGGGGGAAACAAAATCGAA GAAAAGGTGAATAAAACACACGAAACGAAAAAAAACAACGTATAAACGCT TTTGTATAGTCTCGGCTCCCCTCTGAAAATACATTGCCGTGTAGCCAGCC TTGTAGCCTGTCTCCGCGTGCGCATCTCTGCTTGCCTGTTTGCCTGCCTG TCCGATCACTCCGCTGCGCTGCCCAGTGATGATGAAGCACTCGTCACGTT TTTTCCCTCCCGCAGGCGTTGCTGTTCTCGATGTTCTGATACCCCCGTAC GACGCTAGCTGCGGACGGAACTGCACCTACTACCGTGCAGATCACGTGCA GTCGTCGGTGGGGCTGGGTGGGCTCGCAGGCGGGGGTGGTTCTTGGGGCA CAGGGGCAGGAGGGCGCTCCGCGGGAGGTAGCAATAATGCCACCCAAGGA GCGCACGTAGTGAGGCTGGTGCCTTGCACGTCGGGCGATAACTATGCTGT TGTGTCAGGGGAAATCATTGCGCCGTTGAATTATGATACCTGATGATGGT GGTGATGGTGGTGATGATGATAATCATGAATAGGCGGGAAGACTGGAGCG ATGTCGATGAAAATCGGTGTCAGAAACACGCATGCGCGTGTCGGCGTCGT GTTGAGCTTTTTTTTGTAATGTTTGCCGTATTAAACTACACA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2618:3773..20614-

>mRNA_H-paniculata_contig2618.7152.1 ID=mRNA_H-paniculata_contig2618.7152.1|Name=mRNA_H-paniculata_contig2618.7152.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig2618:3773..20614- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGCGGACTCCGTCAATCGAAGAGCTGATCAGGATTGTGAGCAACAT
TACCTCGAGTATTGGGCTGGAGCAGGGAACACTCCCAACGGAAGACCACG
TTGAGCCCATAAAGCAGATGGAGCGGACTCCGTCAATCGAAGAGCTGATC
AGGATTGTGAGCAACATTACCTCGAGTATTGGGCTGGAGCAGGGAACACT
CCCAACGGAAGACCACGTTGAGCCCATAAAGCAGTTTGTGGCGTCGCTTA
CACCGCAGAGCCTGGGTCTTGCGCCCGACGCTCATGAGCGCATTACACCC
CCAGCACTGCCGGGGAATATACGGTATTTACATATCGACCAAGTGGCGGG
GGCCTATTCGATCGGAGTGTTTGTGCTGCCTCCGCGAGCGTGCATTCCTT
TGCACGATCATCCAAATATTTTGTGGCGTCGCTTACACCGCAGAGCCTGG
GTCTTGCGCCCGACGCTCATGAGCGCATTACACCCCCAGCACTGCCGGGG
AATATACGGTATTTACATATCGACCAAGTGGCGGGGGCCTATTCGATCGG
AGTGTTTGTGCTGCCTCCGCGAGCGTGCATTCCTTTGCACGATCATCCAA
ATATGTGCGTTGTATCACACGTTCTCTACGGCGTTTTAAAAATGACCTGT
TACGATCGCTTGGAAAATGCGGCGTCTACAATAAGCGGAGCGTCTTCTTT
GAGCTTTGGGTCCACTATGCTGGGGTTTGCGGGGGGATTAGGATTTGGAG
GAGGAGACGCGAGGCGCAGGGACGCGGGGGAATTGGCCGTGTTGGCTGGG
AGCGGGTTGCATCCTGCGCCGTACACGTCGTGTCTGATGCCAACCAAGGC
CAACGTGCACGAACTGGAGGCCGGACATCAGGGTGCGTTGTATCACACGT
TCTCTACGGCGTTTTAAAAATGACCTGTTACGATCGCTTGGAAAATGCGG
CGTCTACAATAAGCGGAGCGTCTTCTTTGAGCTTTGGGTCCACTATGCTG
GGGTTTGCGGGGGGATTAGGATTTGGAGGAGGAGACGCGAGGCGCAGGGA
CGCGGGGGAATTGGCCGTGTTGGCTGGGAGCGGGTTGCATCCTGCGCCGT
ACACGTCGTGTCTGATGCCAACCAAGGCCAACGTGCACGAACTGGAGGCC
GGACATCAGGGCGTTGCTGTTCTCGATGTTCTGATACCCCCGTACGACGC
TAGCTGCGGACGGAACTGCACCTACTACCGTGCAGATCACGTGCAGTCGT
CGGTGGGGCTGGGTGGGCTCGCAGGCGGGGGTGGTTCTTGGGGCACAGGG
GCAGGAGGGCGCTCCGCGGGAGGTAGCAATAATGCCACCCAAGGAGCGCA
CGTAGTGAGGCTGGTGCCTTGCACGTCGGGCGATAACTATGCTGTTGTGT
CAGGGGAAATCATTGCGCCGTTGAATTATGATACCTGAGCGTTGCTGTTC
TCGATGTTCTGATACCCCCGTACGACGCTAGCTGCGGACGGAACTGCACC
TACTACCGTGCAGATCACGTGCAGTCGTCGGTGGGGCTGGGTGGGCTCGC
AGGCGGGGGTGGTTCTTGGGGCACAGGGGCAGGAGGGCGCTCCGCGGGAG
GTAGCAATAATGCCACCCAAGGAGCGCACGTAGTGAGGCTGGTGCCTTGC
ACGTCGGGCGATAACTATGCTGTTGTGTCAGGGGAAATCATTGCGCCGTT
GAATTATGATACCTGA
back to top