mRNA_H-paniculata_contig260.7097.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig260.7097.1
Unique NamemRNA_H-paniculata_contig260.7097.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A6H5K9D4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D4_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 8.910e-135
Identity = 182/200 (91.00%), Postives = 196/200 (98.00%), Query Frame = 1
Query:   13 LRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQV 612
            +RRLHHPNIVGYKDSFLTPRK+HLCIVMEYCDGGDLSTQIKNAR+RLFPE+KILHWFVQIALGLHYMHSR VLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPE+FDNKPYNHKSDIWALGCVLYEM+ L+HAFDA+SL+ LA R+AKGRYPSIHVKYSR+LRDLI+RMLATSP+QRPDLDQ+
Sbjct:    1 MRRLHHPNIVGYKDSFLTPRKDHLCIVMEYCDGGDLSTQIKNARKRLFPESKILHWFVQIALGLHYMHSRLVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPELFDNKPYNHKSDIWALGCVLYEMSALSHAFDATSLHGLAQRVAKGRYPSIHVKYSRNLRDLISRMLATSPSQRPDLDQI 200          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: D8LPU9_ECTSI (Serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPU9_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 1.160e-123
Identity = 183/204 (89.71%), Postives = 200/204 (98.04%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQV 612
            +V+L+RRLHHPNIVGYKDSFLTPRK+HLCIVMEYCDGGDLSTQIKNAR+RLFPE+KILHWFVQIALGLHYMHSR VLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPE+F+NKPYNHKSDIWALGCVLYEM+ L+HAFDA+SL+ LA R+AKGRYPSIHVKYSR+LRDLI+RMLATSP+QRPDLDQ+
Sbjct:   51 EVDLMRRLHHPNIVGYKDSFLTPRKDHLCIVMEYCDGGDLSTQIKNARKRLFPESKILHWFVQIALGLHYMHSRLVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPELFNNKPYNHKSDIWALGCVLYEMSALSHAFDATSLHGLAQRVAKGRYPSIHVKYSRNLRDLISRMLATSPSQRPDLDQI 254          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A7S1UB12_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB12_9STRA)

HSP 1 Score: 346 bits (888), Expect = 4.850e-117
Identity = 165/208 (79.33%), Postives = 184/208 (88.46%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQVRSRP 624
            +VELLRRL+HPNIVGYK+SFLT  KE LCIVMEYCDGGDL   IK ARR+LFPE+K+LHWFVQ+ALGLHYMHS R+LHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFA T IGTPYYMSPEIF NKPYNHKSDIWALGCVLYE+TTLNHAFDA+SLN LA++I +G+YP IH KYSR+LR+LI  ML  SP+ RPDL+ +   P
Sbjct:   51 EVELLRRLNHPNIVGYKESFLTRNKESLCIVMEYCDGGDLCDVIKKARRQLFPESKVLHWFVQMALGLHYMHSNRILHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFAQTCIGTPYYMSPEIFKNKPYNHKSDIWALGCVLYELTTLNHAFDAASLNGLASKIIRGKYPPIHPKYSRNLRNLIDSMLDKSPSARPDLEDILKLP 258          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A836CGE2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE2_9STRA)

HSP 1 Score: 347 bits (891), Expect = 5.050e-116
Identity = 163/204 (79.90%), Postives = 186/204 (91.18%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQV 612
            +VELL+RLHHPNIVGY++SFLTPRK+ LCI MEYCDGGDL  QIK ARRRLF E+KILH+FVQ++LGLHYMHS R+LHRDLKTQN+FLLGNGR+VLGDLGISKVL GTMDFAST IGTPYYMSPEIF N+PYNHKSD+WALGCVLYEMTTLNHAFD++SLN LA++I +G+YP I+ KYS  LRDLIA MLATSPA RPD+DQ+
Sbjct:   51 EVELLKRLHHPNIVGYRESFLTPRKDCLCIAMEYCDGGDLCEQIKGARRRLFSESKILHFFVQMSLGLHYMHSHRILHRDLKTQNVFLLGNGRVVLGDLGISKVLNGTMDFASTCIGTPYYMSPEIFKNEPYNHKSDVWALGCVLYEMTTLNHAFDSNSLNGLASKIVRGKYPPINPKYSPHLRDLIASMLATSPAARPDMDQI 254          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A7S2WHN0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WHN0_9STRA)

HSP 1 Score: 338 bits (866), Expect = 1.090e-110
Identity = 162/208 (77.88%), Postives = 181/208 (87.02%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQVRSRP 624
            +VELLRRLHHPNIVGY  SF+    E LCIVM+YCDGGDL  QIK A+++LFPE+KILHWFVQ+ALGL YMH  RVLHRDLKTQNIF+LGNGRLVLGDLGISKVLEGTMDFA T IGTPYYMSPEIF NKPYNHKSDIWALGCVLYEMTTLNHAFDA+SLN LA +I KGR+P I+ KYS+ LRDLI+ MLATSP+ RPDL  + ++P
Sbjct:   80 EVELLRRLHHPNIVGYLGSFMHRNNESLCIVMQYCDGGDLCAQIKAAKKQLFPESKILHWFVQMALGLFYMHENRVLHRDLKTQNIFMLGNGRLVLGDLGISKVLEGTMDFAETCIGTPYYMSPEIFKNKPYNHKSDIWALGCVLYEMTTLNHAFDANSLNGLACKIIKGRFPPINPKYSKHLRDLISSMLATSPSSRPDLPAILTKP 287          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A7S3HJZ2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJZ2_9STRA)

HSP 1 Score: 329 bits (843), Expect = 3.320e-103
Identity = 154/208 (74.04%), Postives = 180/208 (86.54%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQVRSRP 624
            +V+LLRRL+HPNIV Y DSFL+  KE LCI MEYCDGGDL++QIK AR+ LF E+KILHWFVQ+ LGLHYMH  +VLHRDLKTQN+F+LGNGRLVLGDLGISKVL+GTMDFA T IGTPYYMSPEIF NKPY++KSD+WALGCVLYEMTTLNHAFDA+SLN LA +I KG+YP I+ KYS+ L +LI +ML  +P QRPDLDQ+  +P
Sbjct:   53 EVDLLRRLNHPNIVRYIDSFLSKNKESLCICMEYCDGGDLASQIKAARKNLFSESKILHWFVQLTLGLHYMHGNKVLHRDLKTQNVFMLGNGRLVLGDLGISKVLDGTMDFAQTCIGTPYYMSPEIFKNKPYSYKSDVWALGCVLYEMTTLNHAFDANSLNGLATKIVKGKYPPINPKYSKHLSELIGQMLQLNPQQRPDLDQILRKP 260          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A8J2SGK3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGK3_9STRA)

HSP 1 Score: 318 bits (814), Expect = 4.130e-99
Identity = 152/210 (72.38%), Postives = 173/210 (82.38%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNA--RRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQVRSRP 624
            +V+L++RL HPNIV Y+DSFL   +E LCIVM YCDGGDL  QI  A  RRR F E K+LHWFVQ+ALGLHYMH+ RVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGT+DFA T IGTPYYMSPEIF NKPYNHKSDIWALGCVLYE  TLNHAFDA+SLN LA +I +G+YP +  +YS+ L DL+  MLAT P+QRP L+ +  RP
Sbjct:   51 EVQLMKRLRHPNIVAYRDSFLARNRESLCIVMTYCDGGDLGNQITQAAKRRRPFTEAKVLHWFVQMALGLHYMHANRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTLDFAQTCIGTPYYMSPEIFKNKPYNHKSDIWALGCVLYECATLNHAFDANSLNGLACKIVRGKYPPVSSRYSKHLSDLVGAMLATQPSQRPTLEAILRRP 260          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A835ZAS8_9STRA (NEK1 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS8_9STRA)

HSP 1 Score: 278 bits (711), Expect = 3.620e-90
Identity = 131/208 (62.98%), Postives = 163/208 (78.37%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRR----LFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQV 612
            +VELL+R+ HPNIVGY DSFL   K  LCI+ME+CD GDL  ++  A ++    LFPE KI+ WFVQIALGLH+MH  RVLHRD+KTQNIF+L +GR+VLGDLGISKV+ GT DFAST+IGTPYYMSPEIF NKPYNHKSD+WALG VLYE+ TL HAFDA  +  L+++I KG+YP +   YS + + L+  +LA SP  RPD++Q+
Sbjct:   51 EVELLKRMIHPNIVGYMDSFLY--KNCLCIIMEFCDAGDLGERVTKATQQNPVALFPETKIMTWFVQIALGLHFMHKNRVLHRDIKTQNIFILSSGRVVLGDLGISKVMGGTTDFASTQIGTPYYMSPEIFQNKPYNHKSDVWALGIVLYELATLKHAFDAQCITSLSSKIIKGKYPPVDAGYSNNFKGLVKDLLAISPGARPDVEQI 256          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: A0A482RDJ7_9ARCH (Protein kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RDJ7_9ARCH)

HSP 1 Score: 285 bits (730), Expect = 2.230e-89
Identity = 131/204 (64.22%), Postives = 164/204 (80.39%), Query Frame = 1
Query:   13 LRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQVRSRP 624
            ++R+ HPNIV YKDSF    +++LCIVM YCDGGDL+ ++  A+ +LF E++I+HWFVQ+AL +HYMH  +VLHRD+KTQNIFLLGNGRLVLGDLGISKVL+GTM FA T+IGTPYYMSPE+F N PYNHKSD+WALGCVLYE+ TL H F+A+SL  L+ +IA GRY  I+ KYS+S+R LI  MLA  P  RP + +V  +P
Sbjct:    1 MQRMQHPNIVAYKDSFFADGRDNLCIVMTYCDGGDLAGRLAAAKAQLFKEDQIMHWFVQVALAIHYMHENKVLHRDIKTQNIFLLGNGRLVLGDLGISKVLDGTMQFAKTQIGTPYYMSPELFKNMPYNHKSDVWALGCVLYELCTLVHPFEATSLQGLSAKIASGRYADINPKYSQSMRALIKSMLALDPRARPSVAEVLQQP 204          
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Match: D8LSH1_ECTSI (Serine/threonine protein kinase, possibly NIMA-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSH1_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 4.630e-88
Identity = 133/204 (65.20%), Postives = 167/204 (81.86%), Query Frame = 1
Query:    1 QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRRLFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLGISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTTLNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPDLDQV 612
            +VELL R+ HPNIVGY +SFL   K  LCI+MEYCD GDL  ++  A+ +L PE+K++ WFVQ ALGLH+MHS RVLHRD+KTQN+F+L +GR+VLGDLGISK+L GT DFAST IGTPYYMSPEIF N PYN KSD+WALGC+LYE+ TL HAFDA SLN LA +I KG++PS+  +YS++LR L+  MLAT+P +RPD++Q+
Sbjct:   51 EVELLSRMCHPNIVGYTNSFLY--KNCLCIIMEYCDAGDLGDRVNEAKGQLLPESKVMTWFVQTALGLHFMHSNRVLHRDIKTQNVFILSSGRVVLGDLGISKLLGGTRDFASTCIGTPYYMSPEIFKNHPYNDKSDVWALGCLLYELLTLKHAFDAQSLNGLAGKIIKGKFPSVSTQYSKNLRALVNDMLATNPKKRPDIEQI 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig260.7097.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9D4_9PHAE8.910e-13591.00Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LPU9_ECTSI1.160e-12389.71Serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
A0A7S1UB12_9STRA4.850e-11779.33Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A836CGE2_9STRA5.050e-11679.90Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A7S2WHN0_9STRA1.090e-11077.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3HJZ2_9STRA3.320e-10374.04Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A8J2SGK3_9STRA4.130e-9972.38Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A835ZAS8_9STRA3.620e-9062.98NEK1 protein n=1 Tax=Tribonema minus TaxID=303371 ... [more]
A0A482RDJ7_9ARCH2.230e-8964.22Protein kinase domain-containing protein (Fragment... [more]
D8LSH1_ECTSI4.630e-8865.20Serine/threonine protein kinase, possibly NIMA-lik... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig260contigH-paniculata_contig260:10733..12523 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.1
Seed ortholog evalue4.5e-64
Seed eggNOG ortholog5932.XP_004032351.1
KEGG koko:K08282,ko:K08857
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein tyrosine kinase
EggNOG OGs3ZAMW@5878,KOG0589@1,KOG0589@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelCiliophora
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01001,ko03036,ko03400
Exons4
Model size633
Cds size633
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig260.7097.1prot_H-paniculata_contig260.7097.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig260 10733..12523 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929775.5562634-CDS-H-paniculata_contig260:10732..108751622929775.5562634-CDS-H-paniculata_contig260:10732..10875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 10733..10875 +
1691481005.8337717-CDS-H-paniculata_contig260:10732..108751691481005.8337717-CDS-H-paniculata_contig260:10732..10875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 10733..10875 +
1622929775.5707247-CDS-H-paniculata_contig260:11452..116181622929775.5707247-CDS-H-paniculata_contig260:11452..11618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 11453..11618 +
1691481005.8459816-CDS-H-paniculata_contig260:11452..116181691481005.8459816-CDS-H-paniculata_contig260:11452..11618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 11453..11618 +
1622929775.5813715-CDS-H-paniculata_contig260:11885..120521622929775.5813715-CDS-H-paniculata_contig260:11885..12052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 11886..12052 +
1691481005.8651116-CDS-H-paniculata_contig260:11885..120521691481005.8651116-CDS-H-paniculata_contig260:11885..12052Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 11886..12052 +
1622929775.5930395-CDS-H-paniculata_contig260:12366..125231622929775.5930395-CDS-H-paniculata_contig260:12366..12523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 12367..12523 +
1691481005.8761528-CDS-H-paniculata_contig260:12366..125231691481005.8761528-CDS-H-paniculata_contig260:12366..12523Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig260 12367..12523 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig260.7097.1

>prot_H-paniculata_contig260.7097.1 ID=prot_H-paniculata_contig260.7097.1|Name=mRNA_H-paniculata_contig260.7097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
QVELLRRLHHPNIVGYKDSFLTPRKEHLCIVMEYCDGGDLSTQIKNARRR
LFPENKILHWFVQIALGLHYMHSRRVLHRDLKTQNIFLLGNGRLVLGDLG
ISKVLEGTMDFASTRIGTPYYMSPEIFDNKPYNHKSDIWALGCVLYEMTT
LNHAFDASSLNELANRIAKGRYPSIHVKYSRSLRDLIARMLATSPAQRPD
LDQVRSRPTH*
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mRNA from alignment at H-paniculata_contig260:10733..12523+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig260.7097.1 ID=mRNA_H-paniculata_contig260.7097.1|Name=mRNA_H-paniculata_contig260.7097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1791bp|location=Sequence derived from alignment at H-paniculata_contig260:10733..12523+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGGAGCTGCTGAGGCGATTGCACCATCCCAACATCGTCGGCTACAA AGACTCGTTTCTCACCCCTCGCAAGGAGCACCTTTGCATAGTTATGGAGT ACTGCGACGGCGGCGACCTCAGTACGCAAATAAAAAACGCAAGGTGAGTT CCTGTCTACGCATAGTAGATACGCACCTTTTTTTTATGCATCACCAAGTA CAGAGCAGTTTGCTGACTGCTGTTTGGCAATCGACTGAAATTACATCCGA CTATGAAATCCAGCATACAGCATTCCCCTGACTACCCGTCTGACGAGCAA ATCAAGCCGCGTCCGACGAGAAATTTCCAGCATATATCAGGGCATTTATA TCAAGGTAATGAGGTAGTTGGAGAGGAGTTCTTGTGTAGATGGCGGGACG TCGATTTTTTGTGCTACCATTGTGAAGCCGTCAACAAACGTTTGCTGATT CTACGAACAGATATACATCTAAAGAAATCAAAACAACACCGTTCGGTTAC CCTCTGATAAACGGGATTTTTATAATTGCAAGTTAACCTTCAACTATTGT CAGAGACATATAATATACGCCATGTAGACCCATCATTCAGAAGGACCGTC AAGATGCCGACCTTTGTTCTCCTGGCGTTGATAAATTTGTCCTGCGAATG TGCGAAAAACATTTGTGGGGGAATGACAACTTCCTTCCGGCGGTCGACGT ACACTCACCCTACTTGTCAGGCGACGACTGTTCCCAGAGAACAAAATATT GCATTGGTTTGTGCAGATTGCTCTCGGATTGCACTATATGCATAGCCGGC GGGTTCTACATAGGGACCTCAAGACCCAAAATATATTTCTCCTAGGAAAT GGCCGACTAGTACTGGGAGATTTGGGAATATCTAAGGTACGCGCTACCGC TCCCAGAATACACTATATCTCGGTCCGAATAGGGCGTATTGTTCAAGTAT CGCCGCCATCGGGACTATACATTAGATGGGAATATGTGTCTTGCATCCGT GAAAACATGATCACAGTACACGTCTATTTTGACACTCAAATGGAGCCGTG TCCTCCACCGTGGAAATCCAGTATGCCCAACCCCGACAACTGCATCCCTT TTTGCGTGGGTCTGCTGTGTTTCCGCCCGGCAATCAATCCTGTGTTATAT AAGGTGCTCGAAGGGACGATGGACTTCGCGAGTACGCGCATCGGTACGCC GTACTACATGTCTCCCGAGATTTTTGACAACAAACCGTATAACCACAAGT CCGACATATGGGCCCTCGGATGCGTTCTGTACGAGATGACTACTCTCAAC CATGCGTTCGATGCGTCCAGGTGATATCACCGGCTTTGCACAGATTAGAC TGCTGAAAGATCTAAATAATGTATTTTGTTCACGACTCTCGGTGGACGCG AACGATCAAGTTGAAACCACCTTTAATGATTGCGAAATGCAGCATGCGGG CAGAGGAGCAACTACCTGGGGACAAAAATCTTTAGTAACGTTGAGCTGGG ACTCATGTTTAGGTCCCGTCCCTGGCGCAACATCTGGAATACCACATGAA TGCAAACGACGTGTTTGTTACTATGTGCCAATGTTTCCATCGTATTTATT TACATGTCTCCTGCACGTGACTGTAACAAACAAGTCTGAACGAGCTCGCT AATCGAATCGCTAAAGGAAGATATCCATCGATACATGTCAAGTATAGCCG GAGCCTGCGCGATTTGATCGCTCGCATGTTGGCTACTTCTCCTGCCCAAC GGCCTGACCTTGACCAGGTGAGGTCTAGACCTACCCACTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig260:10733..12523+

>mRNA_H-paniculata_contig260.7097.1 ID=mRNA_H-paniculata_contig260.7097.1|Name=mRNA_H-paniculata_contig260.7097.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig260:10733..12523+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGGAGCTGCTGAGGCGATTGCACCATCCCAACATCGTCGGCTACAA
AGACTCGTTTCTCACCCCTCGCAAGGAGCACCTTTGCATAGTTATGGAGT
ACTGCGACGGCGGCGACCTCAGTACGCAAATAAAAAACGCAAGCAGGTGG
AGCTGCTGAGGCGATTGCACCATCCCAACATCGTCGGCTACAAAGACTCG
TTTCTCACCCCTCGCAAGGAGCACCTTTGCATAGTTATGGAGTACTGCGA
CGGCGGCGACCTCAGTACGCAAATAAAAAACGCAAGGCGACGACTGTTCC
CAGAGAACAAAATATTGCATTGGTTTGTGCAGATTGCTCTCGGATTGCAC
TATATGCATAGCCGGCGGGTTCTACATAGGGACCTCAAGACCCAAAATAT
ATTTCTCCTAGGAAATGGCCGACTAGTACTGGGAGATTTGGGAATATCTA
AGGCGACGACTGTTCCCAGAGAACAAAATATTGCATTGGTTTGTGCAGAT
TGCTCTCGGATTGCACTATATGCATAGCCGGCGGGTTCTACATAGGGACC
TCAAGACCCAAAATATATTTCTCCTAGGAAATGGCCGACTAGTACTGGGA
GATTTGGGAATATCTAAGGTGCTCGAAGGGACGATGGACTTCGCGAGTAC
GCGCATCGGTACGCCGTACTACATGTCTCCCGAGATTTTTGACAACAAAC
CGTATAACCACAAGTCCGACATATGGGCCCTCGGATGCGTTCTGTACGAG
ATGACTACTCTCAACCATGCGTTCGATGCGTCCAGGTGCTCGAAGGGACG
ATGGACTTCGCGAGTACGCGCATCGGTACGCCGTACTACATGTCTCCCGA
GATTTTTGACAACAAACCGTATAACCACAAGTCCGACATATGGGCCCTCG
GATGCGTTCTGTACGAGATGACTACTCTCAACCATGCGTTCGATGCGTCC
AGTCTGAACGAGCTCGCTAATCGAATCGCTAAAGGAAGATATCCATCGAT
ACATGTCAAGTATAGCCGGAGCCTGCGCGATTTGATCGCTCGCATGTTGG
CTACTTCTCCTGCCCAACGGCCTGACCTTGACCAGGTGAGGTCTAGACCT
ACCCACTAGTCTGAACGAGCTCGCTAATCGAATCGCTAAAGGAAGATATC
CATCGATACATGTCAAGTATAGCCGGAGCCTGCGCGATTTGATCGCTCGC
ATGTTGGCTACTTCTCCTGCCCAACGGCCTGACCTTGACCAGGTGAGGTC
TAGACCTACCCACTAG
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