mRNA_H-paniculata_contig26.7096.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig26.7096.1
Unique NamemRNA_H-paniculata_contig26.7096.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: D8LQ25_ECTSI (Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LQ25_ECTSI)

HSP 1 Score: 384 bits (985), Expect = 3.040e-122
Identity = 225/449 (50.11%), Postives = 278/449 (61.92%), Query Frame = 1
Query:   34 REELALQQGALLEASQSRSILLIYFDLVQSGMDLNPAVKETTRVMRVGT-KVYQVCTCWEDQKLLMTTPGEGRGVAKGHDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCHHPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLF------------------STTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLDSSPTR-TPGVAVVLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            R++LA + G+LL+ SQSRSILL YF+LVQSG++ N AV+ T   +RVG  KV++V   W ++  L+T+  EGRGV+ G D R +L   Q A L AFIS +HE G+QVF RTV EWI+  C+  +SNRAVGGLLYR+GYRRRRGRIK+PPLN+ +KARIRR   + S A T+EE E AVIVYMD SF HQLHGSAYSYF  D+ G+VQDG+ RTSGKG R+IMVHAITK G LA  D+  FPI EG FKP    KG+QG   +G E+TAEM WQAK ATGDYH AMTDKMFMEWLE+RLA   K      +  L                   S ++   T + ++  C K+ +     +S A  R KK    V             A   + + +S   +   G  V LA +         F    P KLMEKVE F+  RGWQLIWTP
Sbjct:   88 RDDLAPRTGSLLDTSQSRSILLTYFELVQSGVEPNKAVQRTASTLRVGKDKVFKVRAHWWEKTELLTSSAEGRGVSSGKDGRKLLDDVQCANLRAFISDKHENGQQVFRRTVREWIKETCNKDLSNRAVGGLLYRIGYRRRRGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDDGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMTDKMFMEWLERRLAPAFKAKYGNKKMILVLDNASYHHGYDAEVGVPESNSKGYNTALLRKYKCRKITVEREVTSS-AGVRSKKYTFQVP------------ATGTFPQANSKCGKGVSGPEVALATRA-------FFQLKHPTKLMEKVETFMNGRGWQLIWTP 516          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KZM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM0_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.110e-116
Identity = 185/299 (61.87%), Postives = 224/299 (74.92%), Query Frame = 1
Query:   34 REELALQQGALLEASQSRSILLIYFDLVQSGMDLNPAVKETTRVMRVGT-KVYQVCTCWEDQKLLMTTPGEGRGVAKGHDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCHHPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLA 927
            R++LA + G+LL+ SQSRSILL YF+LVQSG++ N AV+ T   +RVG  KV++V   W ++  L+ +  EGRGV+ G D R +L   Q A L AFIS +HE G+QVF RTV EWI+ +C+  +SNRAVGGLLYR+GYRRR GRIK+PPLN+ +KARIRR   + S A T+EE E AVIVYMD SF HQLHGSAYSYF  D+ G+VQDG+ RTSGKG R+IMVHAITK G LA  D+  FPI EG FKP    KG+QG   +G E+TAEM WQAK ATGDYH AM DKMFMEWLE+RLA
Sbjct:   88 RDDLAPKTGSLLDISQSRSILLTYFELVQSGVEPNKAVQRTAATLRVGKDKVFKVRAHWWEKTELLASSAEGRGVSSGKDGRKLLDDVQCASLRAFISDKHENGQQVFRRTVREWIKERCNKDLSNRAVGGLLYRIGYRRRGGRIKIPPLNDDRKARIRRFLVEMSAALTQEEKEEAVIVYMDESFCHQLHGSAYSYFLTDDNGVVQDGMGRTSGKGLRMIMVHAITKGGALAAVDENNFPIPEGWFKPKDKGKGRQGAGSMGTEETAEMLWQAKRATGDYHDAMKDKMFMEWLERRLA 386          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 2.310e-85
Identity = 190/447 (42.51%), Postives = 242/447 (54.14%), Query Frame = 1
Query:   58 GALLEASQSRSILLIYFDLVQSGMDLNPAVKETTRVMRVGT-KVYQVCTCWEDQKLLMTTPGEGRGVAKG-HDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCHHPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKP--NGTSKGKQGKEP--IGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLF------------------STTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLD--SSPTRTPGVAVVLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            G L    QSR IL++YFDLV+ G   N A ++  + +R+GT KV  V T W D++ L  T G+GRG A    D R V++K Q   L  FI  +HE G+QVF RTV +++E      +SNRAVGGLL RLG++RRRGRIK+PPLNE +K RIR        A   E+   AVIVYMD SF HQ HGSAYSYF  D++GIVQDGI RT+GKG R+IMVHAIT+ G LA   + GFPI EG FK   N   K K G+    + +E TAE  WQAK+ATGDYH AMTD MFM+WL+ RL        +  + FL                   + ++     + ++ GC           SF  TR  + K    N  V     L  A       +  +S TRT                   F  + P KL EK E ++ ++GW LIWTP
Sbjct:   96 GELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCT----------SFKVTRESEGKAAEYNFEVPAQGSLPNANRNGVSKEEIASVTRT------------------YFKKNFPQKLEEKAETYMREKGWGLIWTP 513          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 3.550e-85
Identity = 188/450 (41.78%), Postives = 247/450 (54.89%), Query Frame = 1
Query:   40 ELALQQGALLEASQSRSILLIYFDLVQSGMDLNPAVKETTRVMRVG-TKVYQVCTCWEDQKLLMTTPGEGRG-VAKGHDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCH-HPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLFSTTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLD-------------SSP-------TRTPGVAVVLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            E+  ++G +    QSR +L++ FDL + G   N AV +  R  ++G  KV ++   W D + L  T   GRG +AK  D R  L++ Q  +L  FI+ +H+ G+QVF RTV EW+   C+    SNR+VGGLL RLGY+RRRGRIK PPLN  + ARIRR   +   A   E+   AVIVYMD SF HQ HGS YSYF  DE G+VQDGI RT+GKG R+IMVHAITK G LA   D GFPI EG FK  G+     GK+ + +E+TAE  WQAK+A GDYHAAMTD MFMEWLE RL+     + E               G K     + L L N + +      +K  + N K   V + R      ++ +R +             S P        R  GV+        R  + L++    P +L E+V  F++K+GW LIWTP
Sbjct:  124 EVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCD-GFPIEEGWFKETGS-----GKKKMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFE-------------GKK-----MILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNY----PERLEERVVTFMKKKGWALIWTP 545          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 2.120e-80
Identity = 181/437 (41.42%), Postives = 234/437 (53.55%), Query Frame = 1
Query:   79 QSRSILLIYFDLVQSGMDLNPAVKETTRVMRVG-TKVYQVCTCWEDQKLLMTTPGEGRG-VAKGHDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCH-HPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLFSTTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLDSS----------PT----------RTPGVAVVLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            +SR +L++ FDL + G     AV +  R  ++G  KV ++   W D + L      GRG  AK  D R  L++ Q  +L  FI+ +H+ G+QVF RTV EW+   C+    SNR+ GGLL RLGY+RRRGRIK PPLN  + ARIRR   +   A   E+   AVIVYMD SF HQ HGS YSYF  DE G+VQDGI RT+GKG R+IMVHAITK G LA   D G PI EG FK  G+     GK+ + +E+TAE  WQAK+A GDYHAAMTD MFMEWLE RL+     + E      F   R            + L L N + +      +K  + N K   V + R      ++ +R +            PT          R  GV+        R  + L+     P +L E+V  F+ K+GW LIWTP
Sbjct:  103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLPIEEGWFKETGS-----GKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPE------FKGKR------------MILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNH----PERLEERVVTFMRKKGWALIWTP 511          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 2.820e-77
Identity = 173/413 (41.89%), Postives = 221/413 (53.51%), Query Frame = 1
Query:  151 ETTRVMRVG-TKVYQVCTCWEDQKLLMTTPGEGRG-VAKGHDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCH-HPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLFSTTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLDSS----------PT----------RTPGVAVVLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            +  R  ++G  KV ++   W D + L  T   GRG  AK  D R  L++ Q  +L  FI+ +H+ G+QVF RTV EW+   C+    SNR+ GGLL RLGY+RRRGRIK PPLN  + ARIRR   +   A   E+   AVIVYMD SF HQ HGS YSYF  DE G+VQDGI RT+GKG R+IMVHAITK G LA   D G PI EG FK  G+     GK+ + +E+TAE  WQAK+A GDYHAAMTD MFMEWLE RL+     + E      F   R            + L L N + +      +K  + N K   V + R      ++ +R +            PT          R  GV+        R  + L+     P +L E+V  F+ K+GW LIWTP
Sbjct:   10 QVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCD-GLPIEEGWFKETGS-----GKKEMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPE------FKGKR------------MILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNH----PERLEERVVTFMRKKGWALIWTP 394          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 3.320e-77
Identity = 149/285 (52.28%), Postives = 183/285 (64.21%), Query Frame = 1
Query:   79 QSRSILLIYFDLVQSGMDLNPAVKETTRVMRVG-TKVYQVCTCWEDQKLLMTTPGEGRG-VAKGHDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCH-HPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRL 924
            QSR +L++ FDL + G   N AV +  R  ++G  KV ++   W D + L  T   GRG  AK  D R  L++ Q  +L  FI+ +H+ G+QVF RTV EW+   C+    SNR+ GGLL RLGY+RRRGRIK PPLN  + ARIRR   +   A   E+   AVIVYMD SF HQ HGS  SYF  DE G+VQDGI RT+GKG R+IMVHAITK G LA +   GFPI EG FK  G+     GK+ + +E+TAE  WQ K+A GD HAAMTD MFMEWLE RL
Sbjct:   76 QSRMVLMLLFDLRKGGCCENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLA-KLCYGFPIEEGWFKETGS-----GKKEMEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRL 354          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 8.140e-76
Identity = 174/416 (41.83%), Postives = 222/416 (53.37%), Query Frame = 1
Query:  151 ETTRVMRVGT-KVYQVCTCWEDQKLLMTTPGEGRGVAKGHD-ARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCHHPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKP--NGTSKGKQGKEP--IGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLF------------------STTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLDSSPTRTPGVAV--VLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            +    +R+GT  V  V T W D++ L  T G+GRG A   D  R V++K Q   L  FI  +HE G+QVF RTV +++E      +SNRAVGGLL RLG++RRRGRIK+PPLNE +K RIR        A   E+   AVIVY+D SF HQ HGSAYSYF  D+ G+VQDGI RT+GKG R+IMVHAITK G LA   + GFPI EG FK   N   K K G+    + +E TAE  WQAK+ATGDYH AMTD MFM+WL+ RL        +  + FL                   + ++     + ++ GC           SF  TR  + K    N  V     L  A            R  GV+   + +V R        F  + P KL EK E ++ ++GW LIWTP
Sbjct:    6 QVATTLRIGTDNVLAVRTLWYDKQELYETNGKGRGKATSFDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCT----------SFKVTRESEGKAAEYNFEVPAQGSLPNA-----------NRKNGVSKEEIASVTR------TYFKKNFPQKLEEKAETYMREKGWGLIWTP 393          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 8.260e-76
Identity = 175/433 (40.42%), Postives = 228/433 (52.66%), Query Frame = 1
Query:   91 ILLIYFDLVQSGMDLNPAVKETTRVMRVG-TKVYQVCTCWEDQKLLMTTPGEGRG-VAKGHDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCH-HPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLFSTTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLDSS----------PT----------RTPGVAVVLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            +L++ FDL + G   N AV +  R  ++G  KV ++   W D + L  T   GRG  AK  D R  L++ Q  +L  FI+ +H+ G+QVF RTV EW+   C+    SNR+  GLL RLGY+ RRGRIK PPLN  + ARIRR   +   A   E+   AVIVY+D SF HQ HGS YSYF  DE  +VQDGI RT+GKG R+IMVHAITK G LA +   G PI EG FK  G+     GK  + +E+TAE  WQAK+A GDYHAAMTD MFMEWLE RL+     + E      F   R            + L L N + +      +K  + N K   V + R      ++ +R +            PT          R  GV+        R  + L+     P +L E+V  F+ K+G  LIWTP
Sbjct:    2 VLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLA-KLCVGLPIEEGWFKETGS-----GKREMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPE------FKGKR------------MILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNH----PERLEERVVTFMRKKGLALIWTP 406          
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 6.530e-75
Identity = 172/405 (42.47%), Postives = 217/405 (53.58%), Query Frame = 1
Query:  181 KVYQVCTCWEDQKLLMTTPGEGRGVAKG-HDARAVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCHHPISNRAVGGLLYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYMDNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLLATRDDAGFPIHEGCFKP--NGTSKGKQGKEP--IGEEDTAEMFWQAKIATGDYHAAMTDKMFMEWLEKRLALVSKLLSERSR*FLF------------------STTRHTTTGMKQRSGCLKLRLRNTTQNSFASTRLKKSKLNVKNRTVTVDRWLWRAILKYQRLDSSPTRTPGVAV--VLAVQR*RWPLELSFS*DVPHKLMEKVEVFLEKRGWQLIWTP 1320
            KV  V T W D++ L  T G+GRG A    D R V+++ Q   L  FI  +HE G+QVF RTV +++E      +SNRAVGGLL RLG++RRRGRIK+PPLNE +K RIR        A   E+   AVIVYMD SF HQ HGSAYSYF  D+ G+VQDGI RT+GKG R+IMVHAITK G LA   + GFPI EG FK   N   K K G+    + +E TAE  WQAK+ATGDYH AMTD MFM+WL+ RL        +  + FL                   + ++     + ++ GC           SF  TR  + K    N  V     L  A            R  GV+   + +V R        F  + P KL EK E ++ ++GW LIWTP
Sbjct:   61 KVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKDYLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQE-GFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDAQFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCT----------SFKVTRESEGKAAEYNFEVPAQGSLPNA-----------NRKNGVSKEEIASVTR------TYFKKNFPQKLEEKAETYMREKGWGLIWTP 437          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26.7096.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ25_ECTSI3.040e-12250.11Transposase n=3 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5KZM0_9PHAE1.110e-11661.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX2_9PHAE2.310e-8542.51Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
D8LNM6_ECTSI3.550e-8541.78DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KIM5_9PHAE2.120e-8041.42DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE2.820e-7741.89DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KAU4_9PHAE3.320e-7752.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCN2_9PHAE8.140e-7641.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKL0_9PHAE8.260e-7640.42DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KP14_9PHAE6.530e-7542.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26contigH-paniculata_contig26:4313..6648 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1724
Cds size837
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26.7096.1prot_H-paniculata_contig26.7096.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig26 5074..6522 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929775.3935404-UTR-H-paniculata_contig26:4312..50731622929775.3935404-UTR-H-paniculata_contig26:4312..5073Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26 4313..5073 -
1691481005.7972424-UTR-H-paniculata_contig26:4312..50731691481005.7972424-UTR-H-paniculata_contig26:4312..5073Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26 4313..5073 -
1622929775.5119774-UTR-H-paniculata_contig26:6522..66481622929775.5119774-UTR-H-paniculata_contig26:6522..6648Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26 6523..6648 -
1691481005.8244438-UTR-H-paniculata_contig26:6522..66481691481005.8244438-UTR-H-paniculata_contig26:6522..6648Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26 6523..6648 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929775.4109585-CDS-H-paniculata_contig26:5073..58441622929775.4109585-CDS-H-paniculata_contig26:5073..5844Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26 5074..5844 -
1691481005.8071628-CDS-H-paniculata_contig26:5073..58441691481005.8071628-CDS-H-paniculata_contig26:5073..5844Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26 5074..5844 -
1622929775.4952378-CDS-H-paniculata_contig26:6456..65221622929775.4952378-CDS-H-paniculata_contig26:6456..6522Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26 6457..6522 -
1691481005.8160343-CDS-H-paniculata_contig26:6456..65221691481005.8160343-CDS-H-paniculata_contig26:6456..6522Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26 6457..6522 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig26.7096.1

>prot_H-paniculata_contig26.7096.1 ID=prot_H-paniculata_contig26.7096.1|Name=mRNA_H-paniculata_contig26.7096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=279bp
MDLNPAVKETTRVMRVGTKVYQVCTCWEDQKLLMTTPGEGRGVAKGHDAR
AVLSKAQVAELHAFISAQHEEGKQVFLRTVGEWIEAKCHHPISNRAVGGL
LYRLGYRRRRGRIKVPPLNEAKKARIRRLFEDFSGAFTEEEVETAVIVYM
DNSFRHQLHGSAYSYFFMDEQGIVQDGICRTSGKGQRLIMVHAITKEGLL
ATRDDAGFPIHEGCFKPNGTSKGKQGKEPIGEEDTAEMFWQAKIATGDYH
AAMTDKMFMEWLEKRLALVSKLLSERSR*
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mRNA from alignment at H-paniculata_contig26:4313..6648-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig26.7096.1 ID=mRNA_H-paniculata_contig26.7096.1|Name=mRNA_H-paniculata_contig26.7096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2336bp|location=Sequence derived from alignment at H-paniculata_contig26:4313..6648- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGCAGCACCAGCAGGACATTGCTGAGGCGGCGCGCGAGGAGTTGGCTCT CCAGCAAGGAGCATTATTGGAGGCGTCACAGTCCCGGTCCATCCTGCTGA TTTACTTTGATCTCGTCCAATCAGGCATGGACCTAAACCCAGCCGTCAAG GAGACCACGAGAGTAATGCGGGTCGGCACGAAGGTGTATCAGGTATGCAT CTTCGTAATGTAAAGACAGTACAATACAGTCTGTTCTTTCAAATACGCCA TTTCGAAACATTTTCACATACTTTATCCCAGTGTTTTGGTACTGTATCAG CAGGACGATACCGCCTCTCCTTGCGTGTGTTATAAATCATCACGTTACTG TCTGTAGCCTGTTTTGGCTGAAAAAAAATTATGATTAATAATGCGTCCAC GGTAACTTGTCTGTATCTCTGCCTTCTGAACCGTTTCACCGCGTCTGTTA TGCATAATGTTGGCTCACTTGCACCCTCTGTAGACTGAAAGTACTCCCTC TTGGTGCTGGTGCTGACCCAACATCCTAAAGAAAAAAGGCATCCTAAACT TGTAGTACATACTGAATGCCGACCCGTTTGTATCCTCAAGTTTGCGCGCC CGCTGCACCTGGATTGTGCTGAAGTCTTCGTACCCTCTTCGAGTGAGAGC GATCGTTTTATGTACTGACCGTTTCTCCAAAGTGCTGACGCTTGTGAACA GTGAAGTGTGTGCAACCTCTTGTCAAATATCGTAAATGGTCGCGACGTCA ACTTCGATTGTGATTTTCACGACTGCATTTTCGTAACATTTACGCGGTGA AAAGGTCTGCACGTGTTGGGAGGATCAGAAGTTGCTCATGACAACACCAG GCGAAGGACGAGGTGTGGCGAAAGGACATGACGCGCGGGCGGTCCTATCC AAGGCGCAAGTAGCCGAGCTTCACGCCTTCATCAGCGCTCAACATGAGGA AGGGAAACAAGTTTTCCTGCGGACGGTGGGCGAATGGATCGAGGCCAAAT GCCATCATCCCATTTCGAACCGTGCAGTAGGAGGACTGTTGTATAGGCTC GGTTATAGGCGCCGCCGTGGACGGATCAAAGTCCCCCCTCTCAACGAGGC GAAGAAAGCGCGTATTCGACGACTTTTCGAAGACTTTTCTGGTGCTTTCA CTGAAGAGGAGGTAGAAACGGCAGTTATAGTATACATGGATAACAGTTTC CGCCACCAGTTGCATGGTTCTGCGTACTCGTACTTTTTCATGGATGAGCA GGGGATAGTGCAGGACGGGATCTGTCGAACCTCGGGCAAGGGTCAGCGAT TAATCATGGTTCATGCAATCACTAAGGAAGGCCTGTTGGCAACTCGTGAT GATGCCGGATTTCCTATCCACGAGGGGTGCTTCAAACCTAACGGAACGAG TAAGGGTAAGCAAGGAAAGGAGCCGATAGGTGAAGAGGATACGGCAGAGA TGTTTTGGCAGGCCAAAATTGCCACAGGGGATTACCACGCTGCGATGACC GATAAAATGTTCATGGAGTGGCTCGAAAAGCGTCTGGCGCTGGTTTCAAA GCTGCTTTCGGAAAGAAGCAGATGATTCTTGTTCTCGACAACGCGTCATA CCACCACGGGTATGAAACAAAGGTCGGGGTGTCTGAAACTAAGACTAAGA AACACAACACAGAACTCTTTCGCAAGTACAAGGCTGAAAAAATCAAAGTT AAACGTGAAGAACCGGACGGTAACGGTGGATAGATGGTTGTGGCGCGCAA TTTTGAAGTACCAGAGACTGGACAGTTCCCCAACTCGAACTCCAGGTGTG GCGGTGGTGTTAGCAGTGCAGAGGTAGCGTTGGCCACTCGAGCTTTCTTT CAGCTGAGATGTCCCCCACAAACTTATGGAGAAAGTCGAGGTGTTCCTGG AGAAGCGAGGGTGGCAGCTGATTTGGACCCCCCTTGCATGCCGTCTTTTC AGCCGATCGAGCTGTTCTGGCAACATGATAAGCAGTATGCCAGCTTCGAC TACGATACGAAGCGTGCCATAAAACAAGTTTGGGAGCAGGTTTGGAAGGG CTGGTATGGGGATGAGAAGTGGGAAGGGCAAGACGGGGGGTGGAAACCGG CAGACTGTGGCAAAGTTGTTGCGCATGCCATTCAAGAGATGTAGAAGTGG GTAAGTACCGACGACGTACTGGGCGGTACCGTGGAAGCCCTCCTCGTACG GGACGATTACGATTACAGTGCCCCCGGGTTCAAGGCTGTCGTGGAGGATG ACGGGGTGGAGCTTCAGGAGGCGCTTGATAGTTGTGCGGAATTTGCGGAG TTTATGGGTGTGGGAGAGGAGTCGGAAGACGGGAAT
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Coding sequence (CDS) from alignment at H-paniculata_contig26:4313..6648-

>mRNA_H-paniculata_contig26.7096.1 ID=mRNA_H-paniculata_contig26.7096.1|Name=mRNA_H-paniculata_contig26.7096.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1674bp|location=Sequence derived from alignment at H-paniculata_contig26:4313..6648- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACCTAAACCCAGCCGTCAAGGAGACCACGAGAGTAATGCGGGTCGG
CACGAAGGTGTATCAGATGGACCTAAACCCAGCCGTCAAGGAGACCACGA
GAGTAATGCGGGTCGGCACGAAGGTGTATCAGGTCTGCACGTGTTGGGAG
GATCAGAAGTTGCTCATGACAACACCAGGCGAAGGACGAGGTGTGGCGAA
AGGACATGACGCGCGGGCGGTCCTATCCAAGGCGCAAGTAGCCGAGCTTC
ACGCCTTCATCAGCGCTCAACATGAGGAAGGGAAACAAGTTTTCCTGCGG
ACGGTGGGCGAATGGATCGAGGCCAAATGCCATCATCCCATTTCGAACCG
TGCAGTAGGAGGACTGTTGTATAGGCTCGGTTATAGGCGCCGCCGTGGAC
GGATCAAAGTCCCCCCTCTCAACGAGGCGAAGAAAGCGCGTATTCGACGA
CTTTTCGAAGACTTTTCTGGTGCTTTCACTGAAGAGGAGGTAGAAACGGC
AGTTATAGTATACATGGATAACAGTTTCCGCCACCAGTTGCATGGTTCTG
CGTACTCGTACTTTTTCATGGATGAGCAGGGGATAGTGCAGGACGGGATC
TGTCGAACCTCGGGCAAGGGTCAGCGATTAATCATGGTTCATGCAATCAC
TAAGGAAGGCCTGTTGGCAACTCGTGATGATGCCGGATTTCCTATCCACG
AGGGGTGCTTCAAACCTAACGGAACGAGTAAGGGTAAGCAAGGAAAGGAG
CCGATAGGTGAAGAGGATACGGCAGAGATGTTTTGGCAGGCCAAAATTGC
CACAGGGGATTACCACGCTGCGATGACCGATAAAATGTTCATGGAGTGGC
TCGAAAAGCGTCTGGCGCTGGTTTCAAAGCTGCTTTCGGAAAGAAGCAGA
TGAGTCTGCACGTGTTGGGAGGATCAGAAGTTGCTCATGACAACACCAGG
CGAAGGACGAGGTGTGGCGAAAGGACATGACGCGCGGGCGGTCCTATCCA
AGGCGCAAGTAGCCGAGCTTCACGCCTTCATCAGCGCTCAACATGAGGAA
GGGAAACAAGTTTTCCTGCGGACGGTGGGCGAATGGATCGAGGCCAAATG
CCATCATCCCATTTCGAACCGTGCAGTAGGAGGACTGTTGTATAGGCTCG
GTTATAGGCGCCGCCGTGGACGGATCAAAGTCCCCCCTCTCAACGAGGCG
AAGAAAGCGCGTATTCGACGACTTTTCGAAGACTTTTCTGGTGCTTTCAC
TGAAGAGGAGGTAGAAACGGCAGTTATAGTATACATGGATAACAGTTTCC
GCCACCAGTTGCATGGTTCTGCGTACTCGTACTTTTTCATGGATGAGCAG
GGGATAGTGCAGGACGGGATCTGTCGAACCTCGGGCAAGGGTCAGCGATT
AATCATGGTTCATGCAATCACTAAGGAAGGCCTGTTGGCAACTCGTGATG
ATGCCGGATTTCCTATCCACGAGGGGTGCTTCAAACCTAACGGAACGAGT
AAGGGTAAGCAAGGAAAGGAGCCGATAGGTGAAGAGGATACGGCAGAGAT
GTTTTGGCAGGCCAAAATTGCCACAGGGGATTACCACGCTGCGATGACCG
ATAAAATGTTCATGGAGTGGCTCGAAAAGCGTCTGGCGCTGGTTTCAAAG
CTGCTTTCGGAAAGAAGCAGATGA
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