mRNA_H-paniculata_contig25936.7076.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A6H5K1Z1_9PHAE (DHHA2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Z1_9PHAE) HSP 1 Score: 139 bits (351), Expect = 7.050e-37 Identity = 72/94 (76.60%), Postives = 79/94 (84.04%), Query Frame = 1
Query: 1 NVTRLAVMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHHQDLAEHVNVQGNAR 282
+V + VMPIPR DLALRREVLVLFELC VDP+ +VF DELDL ALQA+GRLRLTL DHNAVSG L GLGDAVVEIVDHH DL EH +VQG+ R
Sbjct: 185 DVVHVPVMPIPRRDLALRREVLVLFELCDVDPSAIVFADELDLHALQAEGRLRLTLTDHNAVSGGLSGLGDAVVEIVDHHVDLGEHPSVQGSRR 278
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A835YL68_9STRA (DHHA2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL68_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.700e-17 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 1 NVTRLAVMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHHQDLAEHVNVQGNAR 282
N + V+ +PR DL LR++ ++L GV +VF DE+DL + + GRL LTL DHNA+S L L AV+EIVDHH DL +H +V G AR
Sbjct: 37 NPLYVPVISVPRGDLPLRQDAVLLLSRAGVGTDDMVFSDEVDLQGMHSSGRLCLTLTDHNALSSGLASLDSAVLEIVDHHSDLGQHSHVSGAAR 130
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A1N6UBE6_9SPIO (Inorganic diphosphatase n=1 Tax=Alkalispirochaeta americana TaxID=159291 RepID=A0A1N6UBE6_9SPIO) HSP 1 Score: 83.6 bits (205), Expect = 6.030e-17 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 1
Query: 10 RLAVMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHHQD 246
R+ V+ IPR D LR E + L G+DPAL+ FIDE+DL+ L GRL LTLVDHN ++G L DAV EIVDHH D
Sbjct: 62 RIPVINIPRGDYKLRTEAVFLLRQAGIDPALLSFIDEIDLAGLHRAGRLELTLVDHNRLAGNQSDLADAVREIVDHHAD 140
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A1G3RRI8_9SPIR (Inorganic diphosphatase n=1 Tax=Spirochaetes bacterium RIFOXYC1_FULL_54_7 TaxID=1802198 RepID=A0A1G3RRI8_9SPIR) HSP 1 Score: 76.3 bits (186), Expect = 2.730e-14 Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 19 VMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHHQD 246
V+ +PR D LR E + LF+ G+D L++F+DE+DL AL+A+GRL LTLVDHN ++ L VVEI+DHH+D
Sbjct: 66 VINVPREDFKLRTEAVYLFKEAGIDIGLLLFMDEVDLGALKAKGRLMLTLVDHNKLASFQEQLAGCVVEIIDHHKD 141
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A6C1RL35_9SPIO (Inorganic diphosphatase n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A6C1RL35_9SPIO) HSP 1 Score: 75.5 bits (184), Expect = 5.750e-14 Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 19 VMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHHQD 246
V+ IPRAD LR E + LF G+DPA ++F D+LDL AL G L+LTLVDHN +S D V I+DHH+D
Sbjct: 97 VIDIPRADFKLRTEAVYLFAEAGIDPAQLLFADDLDLDALHTAGTLQLTLVDHNKLSAARQQFSDCVTGIIDHHKD 172
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A2D4C8W7_PYTIN (tRNA (adenine(58)-N(1))-methyltransferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8W7_PYTIN) HSP 1 Score: 70.1 bits (170), Expect = 5.420e-12 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 4 VTRLAVMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVS-----GPLGGLGDAVVEIVDHHQDLAEH 258
V + V+ IPR +L LR +V+ LFE G+D + +VF+DE Q +RLTL+DHNA++ LG+ VVEI+DHH DL H
Sbjct: 470 VIAVPVLSIPRDELPLRCDVMALFEALGIDASAMVFVDEFPWHRQQQLASMRLTLLDHNALTTKRMLAACDSLGECVVEILDHHTDLGXH 559
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A1V9ZVJ6_9STRA (DHHA2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZVJ6_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 5.420e-12 Identity = 38/85 (44.71%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 13 LAVMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHHQDLAEHVNV 267
L VM + R + ALR EV LF +D +VF DE+DL A A L+L L DHN + L AV+EI+DHH DL H +V
Sbjct: 64 LPVMSVNRCEFALRCEVSALFHAANIDIEALVFQDEIDLKAFHASNALKLILTDHNKLKQEYEALDSAVMEIIDHHDDLGAHTHV 148
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: A0A6A3V6H9_9STRA (DHH domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3V6H9_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.050e-11 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 1
Query: 16 AVMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGP-LGGLGDA-VVEIVDHHQDLAEHVNVQ 270
AV+PIPRA+L LR +V LF+ GVD +VF+DE + +++TL+DHNA+S + L D VVEIVDHH DL +H++ +
Sbjct: 79 AVLPIPRAELVLRCDVTALFQELGVDTHALVFVDEFPWGV---KSNVKVTLMDHNALSNKKIPQLNDLQVVEIVDHHSDLGQHLDAE 162
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: UPI00097DAD90 (protein prune homolog n=1 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097DAD90) HSP 1 Score: 65.9 bits (159), Expect = 2.140e-11 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 13 LAVMPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHH 240
L +M I +++L LR +V+ L + G+ P L++F D+LDL L GRL+LTLVDHN + L AVVE++DHH
Sbjct: 45 LPLMNIRQSELLLRSDVVFLLQQTGLSPELLMFRDQLDLRVLHRDGRLQLTLVDHNVLPSSDSDLEGAVVEVIDHH 120
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Match: UPI001888A225 (exopolyphosphatase PRUNE1 isoform X1 n=3 Tax=Pungitius pungitius TaxID=134920 RepID=UPI001888A225) HSP 1 Score: 67.4 bits (163), Expect = 4.490e-11 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 28 IPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVDHNAVSGPLGGLGDAVVEIVDHH 240
I +A+L LR + + L +DP L++F D+LDL L GRLRLTLVDHN + P G L AVVE++DHH
Sbjct: 63 IRQAELPLRSDSVHLLRQVALDPELLLFRDQLDLRGLHRDGRLRLTLVDHNVLPRPDGDLEGAVVEVIDHH 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig25936.7076.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig25936.7076.1 >prot_H-paniculata_contig25936.7076.1 ID=prot_H-paniculata_contig25936.7076.1|Name=mRNA_H-paniculata_contig25936.7076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp MPIPRADLALRREVLVLFELCGVDPALVVFIDELDLSALQAQGRLRLTLVback to top mRNA from alignment at H-paniculata_contig25936:2548..3393- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig25936.7076.1 ID=mRNA_H-paniculata_contig25936.7076.1|Name=mRNA_H-paniculata_contig25936.7076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=846bp|location=Sequence derived from alignment at H-paniculata_contig25936:2548..3393- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig25936:2548..3393- >mRNA_H-paniculata_contig25936.7076.1 ID=mRNA_H-paniculata_contig25936.7076.1|Name=mRNA_H-paniculata_contig25936.7076.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at H-paniculata_contig25936:2548..3393- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |