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Homology
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: D7FZ07_ECTSI (RanBP2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ07_ECTSI) HSP 1 Score: 255 bits (651), Expect = 5.470e-76 Identity = 167/230 (72.61%), Postives = 175/230 (76.09%), Query Frame = 1
Query: 250 YDPAEAAL-AAXXXXXXXXXXXXXXXXXXXXVVIAGIAELDASLGR--PPGPAGSSGXXXXXXXXXXXXXXKPGGRGGGEKDFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSFGGGILGATSLAPVP-----GQFDDAPTSRVGTEVTTYDEFGRPRLAG 915
YDPA AA+ A XXXXXXXXXXXXXXXXXX IAGIAELDAS+GR P PAG G +KDFRGP GLFKKGDWTC ACGNVNWERR+TCNKCNN KPN+ A DEAREGLGGGFNERQDRASVATVEVDEDG+DDFGRKK KARADKKAKEDAALARLRKSFGGGILG TSLAPV GQFDDA + VTTYD+FGRPRLAG
Sbjct: 7 YDPAAAAVPAGGRXXXXXXXXXXXXXXXXXXXXIAGIAELDASMGRGAPVPPAGGGGKPLLKKE---------------QKDFRGPAGLFKKGDWTCTACGNVNWERRATCNKCNNPKPNLAATDEAREGLGGGFNERQDRASVATVEVDEDGFDDFGRKKIKARADKKAKEDAALARLRKSFGGGILGGTSLAPVGKPPVRGQFDDASPA---PSVTTYDKFGRPRLAG 218
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: A0A833WHW8_PHYIN (Zn-finger in Ran binding protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WHW8_PHYIN) HSP 1 Score: 140 bits (353), Expect = 1.180e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 1
Query: 484 DFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSF 789
D RGP GLF+ GDWTCN CGNVNWERR+ CN C ++KP + LDE R+G GGGFNERQ+R + A EV EDGYDDFG +K K +A K +E AALARL++S+
Sbjct: 60 DSRGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSSKPGMIGLDEKRDGAGGGFNERQERVASAKTEVGEDGYDDFGMRKKKVKASKTEREAAALARLQQSY 161
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: M4BNB3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BNB3_HYAAE) HSP 1 Score: 142 bits (357), Expect = 1.810e-34 Identity = 70/119 (58.82%), Postives = 86/119 (72.27%), Query Frame = 1
Query: 454 KPGGRGGGEK-------DFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSF 789
+P G GG +K DFRGP GLF+ GDWTCN CGNVNWERRS CN C ++KP + L+E R+G GGGFNERQ+R + A EV EDGYDDFG +K K +A K +E AALARL++S+
Sbjct: 31 RPEGLGGSDKPKSKGGSDFRGPPGLFQPGDWTCNTCGNVNWERRSECNMCKSSKPGMPGLEERRDGAGGGFNERQERVASAKKEVGEDGYDDFGVRKKKVKASKAEREAAALARLQQSY 149
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: A0A6A3KYH4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3KYH4_9STRA) HSP 1 Score: 140 bits (354), Expect = 3.240e-34 Identity = 68/113 (60.18%), Postives = 81/113 (71.68%), Query Frame = 1
Query: 472 GGEK-------DFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSF 789
GGEK DFRGP GLF+ GDW CN CGNVNWERR+ CN C ++KP + LDE R+G GGGFNERQ R + A EV +DGYDDFG KK K +A K +E AALARL++S+
Sbjct: 45 GGEKPKPKGGVDFRGPPGLFQPGDWACNTCGNVNWERRNECNMCKSSKPGMTGLDEKRDGAGGGFNERQQRVASAKTEVGDDGYDDFGMKKKKVKASKAEREAAALARLQQSY 157
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: A0A6A3Y7K4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Y7K4_9STRA) HSP 1 Score: 140 bits (353), Expect = 8.080e-34 Identity = 67/112 (59.82%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 454 KPGGRGGGEKDFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSF 789
KP +GG DFRGP GLF+ GDW CN CGN+NWERR+ CN C ++KP + LDE R+G GGGFNERQ R + A EV +DGYDDFG KK K +A K +E AALARL++S+
Sbjct: 49 KPKPKGGA--DFRGPPGLFQPGDWACNTCGNINWERRNECNMCKSSKPGMTGLDEKRDGAGGGFNERQQRVASAKTEVGDDGYDDFGMKKKKVKASKAEREAAALARLQQSY 158
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: G4Z0Q3_PHYSP (RanBP2-type domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z0Q3_PHYSP) HSP 1 Score: 145 bits (365), Expect = 9.300e-34 Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 454 KPGGRGGGEKDFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSF 789
KP +GG DFRGP GLF+ GDWTCN CGNVNWERR+ CN C +AKP + LDE R+G GGGFNERQ+R + A +EV EDGYDDFG +K K +A K +E AALARL++S+
Sbjct: 240 KPKPKGGA--DFRGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSAKPGMAGLDEKRDGAGGGFNERQERVASAKMEVGEDGYDDFGMRKKKVKASKAEREAAALARLQQSY 349
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: A0A7S2CIC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIC2_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.410e-33 Identity = 68/103 (66.02%), Postives = 76/103 (73.79%), Query Frame = 1
Query: 484 DFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSFG 792
D RGP GLF DW C CGNVNW RRSTCN CN KP++ D+AREGLGGGF ERQ++AS++TVEV EDGYDDFGRK DK AKE AALARL S+G
Sbjct: 25 DHRGPAGLFVAADWDCPGCGNVNWARRSTCNMCNTKKPDLADPDDAREGLGGGFLERQEQASLSTVEVAEDGYDDFGRKIKSKNKDKAAKEAAALARLTASYG 127
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: A0A0P1AAN2_PLAHL (Zinc finger protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAN2_PLAHL) HSP 1 Score: 144 bits (363), Expect = 3.520e-33 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 478 EKDFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSFG 792
E D RGP GLF+ GDWTCN CGNVNWERRS CN C ++KP + LDE R+G GGGFNERQ+R + A EV EDGYDDFG +K K +A K +E AALARL++S+G
Sbjct: 298 ENDSRGPPGLFQPGDWTCNTCGNVNWERRSECNMCKSSKPGMVGLDEKRDGAGGGFNERQERVASAKTEVGEDGYDDFGIRKKKVKASKAEREAAALARLQQSYG 402
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: D0NJ98_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJ98_PHYIT) HSP 1 Score: 142 bits (359), Expect = 3.520e-33 Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 466 RGGGEKDFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSF 789
+GG D RGP GLF+ GDWTCN CGNVNWERR+ CN C ++KP + LDE R+G GGGFNERQ+R + A EV EDGYDDFG +K K +A K +E AALARL++S+
Sbjct: 212 KGGTGTDSRGPPGLFQPGDWTCNTCGNVNWERRNECNMCKSSKPGMIGLDEKRDGAGGGFNERQERVASAKTEVGEDGYDDFGMRKKKVKASKTEREAAALARLQQSY 319
BLAST of mRNA_H-paniculata_contig259.7059.1 vs. uniprot
Match: A0A7S2WNS0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNS0_9STRA) HSP 1 Score: 137 bits (346), Expect = 5.690e-33 Identity = 80/154 (51.95%), Postives = 90/154 (58.44%), Query Frame = 1
Query: 460 GGRG-----GGEKDFRGPEGLFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNERQDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSFGGGILGATSLAPVPGQFDDAPTSRVGTEVTTYDEFGRPR 906
GGRG G DFRGP GLF K DW CN CGNVNW RRS CN C AKP+ DE R+GLGGGF ERQ+RAS VEV +DG+DDFGRK + ++K AKE AALARL SF G T V + YDEFGR +
Sbjct: 16 GGRGXXXXXGRGADFRGPPGLFVKADWDCNGCGNVNWARRSHCNMCGQAKPSTAGPDEQRDGLGGGFLERQERASSTQVEVADDGFDDFGRKAKQRASNKSAKEAAALARLNASFTG-----------------VRTGVVIEDDVEYDEFGRKK 152
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 260.0 |
| Seed ortholog evalue | 1.6e-66 |
| Seed eggNOG ortholog | 2880.D7FZ07 |
| KEGG ko | ko:K13098,ko:K14651 |
| KEGG Pathway | ko03022,ko05202,map03022,map05202 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006366,GO:0006367,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023051,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1901796,GO:1902531,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 |
| EggNOG free text desc. | RNA binding |
| EggNOG OGs | KOG1995@1,KOG1995@2759 |
| Ec32 ortholog description | Zinc finger, RanBP2-type |
| Ec32 ortholog | Ec-06_002040.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03019,ko03021,ko03041 |
| Exons | 5 |
| Model size | 1999 |
| Cds size | 1044 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig259.7059.1 >prot_H-paniculata_contig259.7059.1 ID=prot_H-paniculata_contig259.7059.1|Name=mRNA_H-paniculata_contig259.7059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=348bp
MEADDPSADAHDETPYDPAEAALAASAPSPMGRGRGRGRGRGGGGVVIAG
IAELDASLGRPPGPAGSSGGGGGGGSGGGTGRGKPGGRGGGEKDFRGPEG
LFKKGDWTCNACGNVNWERRSTCNKCNNAKPNVFALDEAREGLGGGFNER
QDRASVATVEVDEDGYDDFGRKKNKARADKKAKEDAALARLRKSFGGGIL
GATSLAPVPGQFDDAPTSRVGTEVTTYDEFGRPRLAGDLSGERLNGGETG
SRGGSNGAGGGGGGGGGEDNGRERERDGRDRDRDRDRRDRDRERSRGGGG
GGGEKDRDRDRRRERSRSRERGGRDDKEKDRSSRRRRSRSRSRDRRR* back to topmRNA from alignment at H-paniculata_contig259:22074..32269+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig259.7059.1 ID=mRNA_H-paniculata_contig259.7059.1|Name=mRNA_H-paniculata_contig259.7059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10196bp|location=Sequence derived from alignment at H-paniculata_contig259:22074..32269+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTAGCACGGAGGATCCGGCGGTCCTGCTACAGCGACTGCTGGTTGTATTC
TCCAGTGTACGGGGGGCCCAATTTTCTTACGTTTCCTTACCTTACACACT
TTGCAGGAACGATATTGCTGCATCATACTATTTATAAGCAAAAGGAGCAC
ATACAATTTTCAGTAGCACCGAACGGGGGTGGCAAACACAAGGAGCGATA
CACTATGGAGGCAGACGATCCGAGTGCCGATGCGCACGATGAGACTCCTT
ATGACCCCGCCGAGGCAGCCTTAGCGGCCTCCGCACCGTCTCCGATGGGA
AGGGGTAGGGGACGTGGCCGTGGTCGTGGCGGCGGCGGTGTGGTGATAGC
AGGCATCGCTGAGCTCGATGCTAGTCTGGGCCGACCTCCAGGACCAGCAG
GCAGCAGCGGCGGAGGTGGCGGTGGTGGCAGCGGTGGTGGCACAGGCAGG
GGCAAGCCCGGTGGGCGAGGTGGGGGCGAGAAAGACTTCAGGGGGCCTGA
GGGGCTGTTCAAGAAGGGTGACTGGACTTGCAATGCCTGCGGGAACGTGA
ACTGGGAGCGTAGGAGCACCTGCAACAAGTGTAACAACGCGAAGCCTAAT
GTTTTCGCTTTGGATGAGGTATAATAAGGGAACTCACCTGGGCGTACCAG
GACTGACTGTCGTCCCGTTTGTTGCATCAACCGTTACGCCGGTACATGTT
ATTTATTACAGTCGGTGATAGTGACAGTGGTTCAGATGTGTTGGCTCTGA
TCTGTACTGGCTGGCTGCTGGGCGGTGACAGTCATACGTCAAGATGTGAA
AATCCTCCTTCTTGTGAGTGTCGAAGGATTTCCAGCGGCTATTTGGGTTT
CGACATGTAGGCTGTAGCACGAACAGGCGGTACACCGTAGGCTCTAATTT
TATCTTATATAAATGGAAGTTATTCCATACGAAAATTAAATAACTTCGGT
CGAGCGTAGCGAGTAAGAAATTCGTATGTATCTCGATGGTAGCGGCGGAT
TGCACCCCGATCCAAGGTCCACTGGAAAGAGCATTATTGTAACAACACTT
CACATGTGTTTTCCAAGCTGTCACCTTTTTTTCTTCATCACATTTGATTA
CTACTTTGTCAAATCCCGTCGGTCATAGACTAGACCGCACTACACATGCT
CTTCATTTATATGGCGTACAATAAGCAAGCAGCACCGGTATAATCAACAG
AGTTACAACTAGATTTTGCGATCACCACTAGTCCCGATAGATGTAGGTCA
CATCTTCAACCAGCCAAGTTTCAATTTTCACCAACCAGTTTAAAGCCGAC
CTCTTCCTCTTAAGTACGGTTATGTACGAAACAGTCGTCCCAAACAATGG
GCAGTTCCACAATTTATCGTTCGCCCCAGAAATATCCTACTCCCCTTCCC
ATTTCCCTACTGAACAACGTGAAAACGTCCTGTCCCCCCGTCTTGACCAA
TTTCAAGCAAACCTCTTCCTGCCAAGTAACAAAAAAAAGAATAGGGCGTC
CCAATCAACGGGCAGTCTCACTACTTGTTGCTCGCACCAAATATATCCTC
CTTTTGGTCACATGTCTTTTTGCTGACAAGTGTGAACAACTGAAGTCTGA
AGTGAGCTGCATAATATCAAACATGGGTTACAATAGAGATTTTATATGAG
TTTCAGAGCTACAGTTCAACTGACTATGGCAGGGTTACTTACGAACGATA
TTTTTTTCATGGTCTCCTTCGTTCATGTGAAAACTGTTTCATGTGTCACC
TACAGTTTACATGCGAGTGATATAGTGATCCTCCCCTGTGAAAGTTGCCG
TAGCCCATGTCGTGCGTGCTCGAAGAGGTGCGTGAAATCCTGGTACTTGG
TCATGATGGCGTCAGAATTTATGTTGTGGAACCTCCTCCCCCCCCTCCTC
AGGGTCGATAAGAGATCGACCCTGCCTGTTGGCAAATTTTACACCTCTTC
ATACTGTATCGCAAAGCAAGCGAACTTGTTCAAATTTAATTACCAGATTA
ACGCCAATTCCTTCCCCAGTTAGTTTACTCATGAAAACAGTGAAATTGCT
ACGAGAGATGGACTAACTCCCGTCATCGGTGCCAGCCATTTCAGTTGTAG
TCATCAAAGATAAATATAAATACAATCGATTTTCCATAATACAGGAAAGG
AAAAGAAAGCGATGGCCAAAAATAACGGCATAACCCTTGATTCTCGGTTC
TGATGGTATTCTCAAGCCGAGAAGTGGCGACAATATCATCCCTATTGTTG
ATAGTGGCGCGGTAAATAATGTGTTGGTCCCTGCTGTTTTTCGTTGGAAC
CCTGCGAAGGAAACAGGCAAACATTGACCGCATGGCACAGGTAAAGCAAA
ACACTTTCCCCGCACGATGTTGATGTACGTTGTCCTGACGGGTTGTCCCA
CGGTGTTAATTTTTCAGGTTCTTCGTTTGTTTGGCCACGCGCAGCAGCAG
CTATTATAGCAGGCGCTGGTGAGTAAATACTCCCTCAGCCATGACTATTA
AGTATGCTGACTGCGTAGGTGTGGTACAGGCCTATTTTTACGGAACCCGG
TGCAGGAATTACCGTTACTCCAGGACTTCACCGCATCTAATTGGCCTGCC
CCCCCCTCCCCGCTTTTCGGATTCTCAGTTTCCTGGCAAATTTTCAATGA
TGCAGTTAAGACGAAATTTTACACAAAGATGCCCCAATACTAGCTTTTCA
CACGATCTCCAGCCACAACATGGCAAACCTTGTCAGAAGATCATGTGGGG
ATTCTGAACATATGCTTAGGATGTTTGCCAAACACATATTTTCCCCTAAA
TACGCGGAAGAATTTTTATTTTTTCTACGACACACCAGTCCGATTGCTGA
GGCCCGCCGTCAGACATTGACCTTGTGCCACAAAGTCCGCAGAATGAAGA
AATAGTACGGTATACAGTATAGATCCCGCGTGTAGTGAATGTTCGTGTGT
ATGAACAAGGAGTTCTTCACTTGAACTTTCAGCTATGGGTAATGGCCCTA
TATAATGAAGACCCAAGCGACCGCGCTATTCCTGGGGGTCTAAACTTGGA
GTGTCTCTTTTTTTCATCAGACGTCAACTGAGTGCTATCTTTTCACCTGT
AAAATTCTTCCCCCAAGACACTAACCTGGAAATTATGGCAAGCAAAACAT
GAGTACGCCCCTCGCTCCCTCCGCGCCCCCTATCCCCCCCCCCAAGACAA
AACATGTTGTGCTTGCCCCTCACGTGATAATTCTCAACCCAACGCATATG
CTGGTGCTTCTTTTTTTTTCTTCCGTGCCTTCCCTCCTCGCCAGGCACGC
GAAGGTCTCGGAGGAGGGTTTAATGAGCGGCAGGACAGAGCCTCGGTGGC
GACGGTCGAGGTAGACGAAGATGGCTACGATGACTTTGGACGCAAAAAAA
ACAAGGCTCGAGCGGATAAGAAGGCCAAAGAGGTACAGTAGCTTGGGGGG
TGGCGTGGCATATGGAGTGAGTGGATGAATTGATGCTTGAATGAAGGAGG
GTTTGGGTTTTTGGCGTACTAAATTACAGTAAGTACTGCCGTACGACCAC
GCGTACGCCAGCCATCACGGCTCAGCGTGTACAAATGATCAAATTTTACG
GTTTTCACTTTTTGGTGACCAGCGACTGCTACTGAGTAGTAGTTTTTCCA
TTAATACTAGTGAAAGAAGATGCTGTTCGTTTTGACCTATTGAGGCCGTG
CCTTAGCCCTAAAGGAAGTGACTGAGTGAGGTTACAAGTGACCGAGAGTG
GCTGAAGAAAAATTGCATGGCACACGCGTTTTGCCGGTGGATGCTGCGCC
AATCAAAACTGCATTGTGTATAATTATGCCTTCACCGTCCTTCTCAATCG
CTTGGCACTTCATCACTGAGTAACTATATTTTTAGGGCCAAAACACGGCC
TGAGTACGTAAAGGTGAAAAGGGTCTGGTAGTCACGGACCTACACCCGAA
CGGGTAGGGTAACTCGTGAACTGAGTATGACTGGAAGTCTTGTCAGAGGT
CTTTTAGTGGGTGCAACCCCACACTGCCTACTTGGTTCGGCCGAACCGGG
GTGGCGCCTACCCCGCAGAGGAACAAATGACTGTTCTGTTAAAGGAAATA
TAGAAATACTTCGGTATAGAAGCATCGGACAAAGGTTTTTGCCTTAGCCT
TCCGGGGGTTAAAACAAGAAAGAAAAAGGTCTGGTAGTTGGCGTACTGTA
CTACCGTGGTCGAGTTGTGTGTGTGCTAGCTATGCTTCAGCGTGTGCACA
TGATAAGAGTCAGCTGTTGTTTGCCTCGTGAGGGTTGGGATGCTTTTTTG
TTATTATCTAGCACATGTGATAACTTCGAGTCTGGCTGTGACGGGTGGCG
GTCTCGGTTGGTCGGCGTACGGCCTTGCACAATCAAATCGATCCCTTCGA
ACGATTTCCTGTTCTCGAACAGAGGGGCAGCTATAGCTTTAAACCTCAAC
CTTTCGTGATGAGATACCATGTTGGCACACTCGTTCGGAAACAGATGTCG
TCCTGTGAGGCAGGCAGCGTCCTATGTGTTGGCGGGGGGCGGCGTAAGGA
CAACAGCGACATGTTGTACTCCTCCCTTCTCGATGACTTGGTGGAAGGAG
ATTCGCTCCTATCACCACAAGATACACTGCAGAAGAGCCGCAACTGGCTA
GGCTTGTGCAATCCCATGTTTTGCCCTTGATCTGTGCACACCGGCTCTCT
GCGCCTCGCAAATAATATAGGCACAATAACCCCTCTTTCAGAAGTTACAC
CAGTAGTTCTAAAGAGTTGAAAAACTGCTCCTGAACGCCCGCTTGCTGCC
ATTGCCTCAGCGTAGTCACGTTTGCAATGGGGATATGGATGCGCCTCGAA
AATCTTCCCCTGACGCCCCTCCTGTTTCCGTCTCCTCTTCGCTTTTCTAT
TAGAACCGTCCAATTTTTAAAAACGGGCGATTGATTTGTAACTTTGTCAT
CTTTATGGAGATATAATGTATTTTGAAACGTTCAGGTGTTGCATGACCGT
CGTCAGCCCGTGTCGTGAGATGTTTGGTTAATTCTAATTATGAGCGCAAC
CCCTGTATTCTTCATGTTTTGATCTTTAATTATAAACCAAGTAGATACTA
CTTACTAAAAGCTTTTAGGTTTTATAAAAAAAATTAAAGAAATGTAGAAA
AAAAAAAATGAGCTTGAAGAAGGTGGGGATGAGGTCAGGTCTTCATGGCC
CTTAATTCAAAGTAGCATGTCTGGCATGGTATTGCCATCACCGTACTGTA
GTGTACGCAGCGCACAAGAAAAAATACACCTGAAGGTAACGGGTGAATTG
CTTGAATGTAATAGTAGTGGGTCTTGACTACTTAAAAGACATACTATTGC
AGTACTTGATAGCCCATCGCAGCGCCGGCGGCGTGCCTAACTCGGGCCCT
CTCAAACGGGTTCGTGTCACGTTACACCTGGACGCAAAACATTGGATATT
GAACGGGGTTGTTCCGAGACGAACATCATCATCATTTACCGCATCAATTA
ATCGGGATATTCACGACCCAAACACCAACCCTAACGCCAACGGCCTCCGG
ATTACTTCGTTTTGATGTGCGGCAGGATGCTGCACTCGCGCGCCTCCGCA
AGTCTTTCGGAGGAGGCATCCTGGGCGCTACGAGCTTGGCTCCCGTGCCT
GGCCAATTCGACGATGCTCCAACCTCGCGCGTGGGCACTGAGGTCACTAC
CTACGACGAATTCGGACGTCCCAGGCTTGCTGGAGACTTATCGGGAGAAC
GATTGAACGGTGGCGAGACCGGTAGCCGTGGTGGAAGCAATGGGGCTGGT
GGTGGTGGTGGTGGTGGTGGTGGGGAGGATAATGGCAGGGAGCGGGAGCG
CGACGGTAGGGACAGAGACAGAGACAGGTCTGTACATGCGTGTGTGTCTG
TGTGTACGTTTTTGTTATTAGTGTATCACGCTTTCGTTTGTCATAAACTG
GTGGACAGGTCACGGCTACGCCAGTGACGGCGACTACGTCGACGATGTTG
TGGTGGTATATATCTAAAAAGTCTATGCACACGGGCTCGCTGCGCTCACC
GTGACTCGCTTGTGCTTCTCACATGTGTAGGTGCAATCAACATGCTAGTT
TCGCACGGTATACATAGACAAACTGCTGAGCAACAACATTGCAGACGTCG
ACAGATTTTCTATGACAGTAGAAATGCGGGCGGGCAAGGTTCAACCATAG
ACCTACTTTTGGCTGTAGACACACGGATACCGATCATGAGAGGTGCAGCT
GCGGAAAAATGATCAGCTCGGTGGAGTCACGGAGTTTGAAATATACAACT
GCACTGCATGGGAGGCTGTATGTACCATGTTTTTTTTTGCAGTGCACTTG
TTCAGGTTTACCCGCTGGCAATGACTTCTTTTCACATCCTTTTAAGCGCT
AGACCGCCTCGCCCACACCATGCCCTCATGTAGCTCCGTACGTATAAACT
GTACCTACTCTAGTATTTATGCCGCGTGTTGACGACAGCCTCTATAACAG
CCGCCATGATGAAAGAGTGCAAGATAAAACCGGAAAAATGTCAACTGGAC
TGTCCGTTCACGGTTCAACAGTTGCCTTGTTTTGGGTTGACGCCCTGCCC
AATCTTCTCTTCACACCCTCTTCAGCACAAGGCTACCTCTCCCACCGTAT
TCCTTGGGCAGCACCTCCGCATATACAAACGTGCTGGTCCTACTCGTCTG
TATGCTGCAAGCCTCTTGGCTCTCGCCTTGAGAAAGAGTGCAAGGCAAAA
TTGGATAACAGTTTACTGTCCAGATTGTCTGTTCATGGTTTCTCCGACAC
ACACATATACACTCTTCCTCAGCACAAAGACGTGTCCCCGTGGGGATGTA
TCTCTGTTGGCTTGCCCTGCTGTGTAACTGCGGCTACCTGTCGCGGTTCC
TGTGTGCACTGTACTGTACTGAGATGGGTTTTATCTGTCTGTGCTATCTT
GCGGACTGGGCGTGATGGCTGCGCAAAGCTGATCATTTAAATAGTTGGTT
TTTATTTCTAAACTTGAACTGAGAGTAGTTTCTCGGCTATTCAAATATGA
AAGTCGTATTTTAGATTCCGCATTTTGAAATTATTTGAATTAAAAATCGA
AAAGACTTTCGAAACGACCATCACCTTAGCCTGTGATATTACAAGCATTT
GACAAATGGTGGTGGTGGTGGTGGTGGTGGTGGTAACGGTTGTACTACAT
GTCTTTGGAAAAGCTCTCGTTAATTACCCCTCCCCCTCCCCTCCTTGACC
ACATGTCTCGAGGGAAGGGATCATTTGTCACAATTATTAGTAGCTCCGTG
AAGCTTATTTGATATCTTCATGAAACCGGTCTTGAGGTTTTGCAGCTGAC
CTCCAATCTAAGTTGCATATACTTGTCAGCAAAATTGGATCAAGTCGAGA
GCGCGCGGGGGGGGTTATCACCCAAAACTGCCTGGCGTTCCATTGCCCCT
TGTACTCTGCCTTCCAAGGGGAGGTGGTGTTGTTCACCGGGAACTGGCCA
GATGGGTCACAGGGACGAGATCACCGCATGATGGCAGCGGGAAAGGATGC
GTAGCAATGCAGCAGAGTAGGCAAGAAACAAGGAAAGTTCTCAGACTGTT
TGAAGGGAGGCCTGTAGACATGCAGAAACAACACTACTTTGATGTGTGGA
GAGCATGTTCCTGGGGTTCCTGGGGTTCCTGGTGTTCCTGAAACCCGGCT
CCGTACACAATAACCAGCGGCATTTTATGCTGTTCCCGGAACAGGTTTCT
AGCTGTGTCCGACCTCGGATGCCCAGCTCATCAACAACAGAACAAAACCC
AAGGGCGTGCCCCGCACTATATCCTAAGACTTCAGAACTAACCCGTAGAG
CAGGCGGTGTCCTCTCGAGAGCGAATCTCTCCTGGGAGCATCGAGCTCTC
AGTTGCAATATTCAATATCCTTTCCTGGGACAGTGTTGGGTAAATGCAAG
TAAAATGGCGATACGTGCAGCTCTAACTTAAGGCTACACGCACTACTACT
CCTGATCTTATGGACACCGAAGCGAAAGAGAAATTCTAATTTTAACGTGA
CAAGTCTCTTCAGATCTCCCTTCGTGTGCATGCTCAAGACATGTGCATGA
CTGTTGAATATTCTAACATCAAACGCCTTGGGGGTCGTACTCGTACAATT
GCCCAAAATTGTTGAGATCGAGGATCCAAGACCCTACTCATGACAAGATT
GCACAACAACCGACGCGGGTTGCGTATGCATCGCTAATGGTGCTAATGGA
GCGATGTCAAGTCAACAAATATCACCCCAAACCTAAATTTCATTCAAAAC
ATTCGACCCCGAGATTGCACGCAACCACCGGGGGATACTCCGTATCCTCC
CCTTCCCTTCCCTCGTGGGCATATAGCCACTTTATTTTTGAAGATATGAA
CTCCATAATTCCCATCACCAGGAGGGTAGATGCACACAGTAATTAGTTAC
CTTCCCGCTCCCCCACTCATTGAAATCGTCTGTATCAGGTCGACGCCAAC
TTTTGCGGTGCTTTTTTCTAATTTACTTGATGTCATGTCGTGTCCCGTTG
TACTCCCCGCCGGGCCTGCCCTGCCTCGGTGATTGTTATAATATAGAGAT
CGGCGAGACCGGGACAGAGAGCGAAGTAGGGGAGGAGGGGGAGGTGGAGG
CGAGAAAGATAGGGACAGAGATAGACGAAGGGAGCGAAGCAGGTGTGTCC
ACAGAAGGCGTGTTCTTGTTTGTATTTGGTTGGTCGGTTGTTGTTGTTTG
AAGTTGGTTTCCATTTCGGGACGACAGAGGTATCTGACGAAAATGTTGTT
CCTTTTGCAATTTTCGGTTTGATCGTACTCCGTATATAGCTTAACAGACA
GCTGCTCGTCGCAGACCCCGTCCGGACCCCAGCTCACCCACACCCACGTT
TCGTTACGAGAGGATTTCCTTCCAAAATCTGTATATTGTCTGAGAGATGC
GAGGAGTCACTGATTGTGAAAATGAATTCGTTTTGTAACAAGACGTTTGT
GTAGATGGACTAGTGTCCAGGACGAGGAGCTAGCTCACTGTTGGCTATAC
ACGACCAAATCAAAATTTGCGACAGAAAGTTGCTTTGCGTAAACACCGCA
ATGTAAATGTTGAGTGCTGCAGTCGTTGTGGGAAAAACCACAACCAACCT
GTGTGTATTTACTATCTGTAATGGACTTCCATCTCTGCACAGCGACGTCT
CCCTATCTCCGTAATCATATCGTGGGAATCGCTGGCCTCCTGTTGTTGAA
GGGGTAACGTTATGTTTCTAATTAGAGTCGGCTGTGAAAGTGACCTTTAA
ACTGACAGCACCAGCGTTCTCTGACTTGTTTCGTGCATGTGTATTATTCA
GGAGCAGGGAGAGGGGAGGACGGGATGATAAGGAGAAGGACAGGTCCAGC
AGAAGGCGACGCAGTCGCTCAAGGAGCCGCGACCGCAGGCGCTGATGATG
GGTTTAGTCTTGTGAGCGACGCCGAGTCGCTGCTCAAGAGGGCTGCTGTT
TGTGTACGGGGAATTTTTTCTCCAAGCATGTGTGTATGTGTTTATTTTAG
CAAGGGCCTGTTGGGATATCGAGCGCTCGTTCTAATGTTTGAGGAGGGAC
AGAGCTCAGCCGTTAAATCGGTTTCAGGTATTTTCATTAGCAGTAGTGTC
TTGGACAATAAAAAAAGAGTTCTGTCTTCAGTAACATATACGACTGTACT
GTAGTTGTATACGTTGCTTTGTACCTTGCACTGGCGTCTGGGATTGAGAA
AAATAAATTGGTATCTATTTTCTTAAGCGGAAGAACTAGAAAAGGCCTTT
TCCGGCGACGGAGTGGGGCGCGGGGGTTGGGGCCTATGTGGCATATCGCG
AGTGGTATGAACGCGTTTTCGACTGTGAGGTTTTGCCATGCCCACGGTAT
GGTCTTCCTCACACAAACGAGGAACTGGTCAGCAAAAAACGAGCCTCAGA
AAAACCAACACAAAACTGTGCTTATTACGAAACCTTGCAGTGTTGATTTA
TTTGGCTGGAAAATGGCAATGTCTTCGATTTTGGTCGTTTTTTCCGAGCC
ACGAGGAGCTGTGTGCGTCTGAAGTGCCCCCACGGAAGTATGGTGGTCAC
TGTGCAATTTCGGCGGTTTCTATGCGCAAGTTCGAGCGAGTGGTCGACCG
AAGCAAAAACAATTGCAGCACGACACGATTCTTGGGATATCCCTGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig259:22074..32269+ >mRNA_H-paniculata_contig259.7059.1 ID=mRNA_H-paniculata_contig259.7059.1|Name=mRNA_H-paniculata_contig259.7059.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2088bp|location=Sequence derived from alignment at H-paniculata_contig259:22074..32269+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGCAGACGATCCGAGTGCCGATGCGCACGATGAGACTCCTTATGA
CCCCGCCGAGGCAGCCTTAGCGGCCTCCGCACCGTCTCCGATGGGAAGGG
GTAGGGGACGTGGCCGTGGTCGTGGCGGCGGCGGTGTGGTGATAGCAGGC
ATCGCTGAGCTCGATGCTAGTCTGGGCCGACCTCCAGGACCAGCAGGCAG
CAGCGGCGGAGGTGGCGGTGGTGGCAGCGGTGGTGGCACAGGCAGGGGCA
AGCCCGGTGGGCGAGGTGGGGGCGAGAAAGACTTCAGGGGGCCTGAGGGG
CTGTTCAAGAAGGGTGACTGGACTTGCAATGCCTGCGGGAACGTGAACTG
GGAGCGTAGGAGCACCTGCAACAAGTGTAACAACGCGAAGCCTAATGTTT
TCGCTTTGGATGAGATGGAGGCAGACGATCCGAGTGCCGATGCGCACGAT
GAGACTCCTTATGACCCCGCCGAGGCAGCCTTAGCGGCCTCCGCACCGTC
TCCGATGGGAAGGGGTAGGGGACGTGGCCGTGGTCGTGGCGGCGGCGGTG
TGGTGATAGCAGGCATCGCTGAGCTCGATGCTAGTCTGGGCCGACCTCCA
GGACCAGCAGGCAGCAGCGGCGGAGGTGGCGGTGGTGGCAGCGGTGGTGG
CACAGGCAGGGGCAAGCCCGGTGGGCGAGGTGGGGGCGAGAAAGACTTCA
GGGGGCCTGAGGGGCTGTTCAAGAAGGGTGACTGGACTTGCAATGCCTGC
GGGAACGTGAACTGGGAGCGTAGGAGCACCTGCAACAAGTGTAACAACGC
GAAGCCTAATGTTTTCGCTTTGGATGAGGCACGCGAAGGTCTCGGAGGAG
GGTTTAATGAGCGGCAGGACAGAGCCTCGGTGGCGACGGTCGAGGTAGAC
GAAGATGGCTACGATGACTTTGGACGCAAAAAAAACAAGGCTCGAGCGGA
TAAGAAGGCCAAAGAGGCACGCGAAGGTCTCGGAGGAGGGTTTAATGAGC
GGCAGGACAGAGCCTCGGTGGCGACGGTCGAGGTAGACGAAGATGGCTAC
GATGACTTTGGACGCAAAAAAAACAAGGCTCGAGCGGATAAGAAGGCCAA
AGAGGATGCTGCACTCGCGCGCCTCCGCAAGTCTTTCGGAGGAGGCATCC
TGGGCGCTACGAGCTTGGCTCCCGTGCCTGGCCAATTCGACGATGCTCCA
ACCTCGCGCGTGGGCACTGAGGTCACTACCTACGACGAATTCGGACGTCC
CAGGCTTGCTGGAGACTTATCGGGAGAACGATTGAACGGTGGCGAGACCG
GTAGCCGTGGTGGAAGCAATGGGGCTGGTGGTGGTGGTGGTGGTGGTGGT
GGGGAGGATAATGGCAGGGAGCGGGAGCGCGACGGTAGGGACAGAGACAG
AGACAGGATGCTGCACTCGCGCGCCTCCGCAAGTCTTTCGGAGGAGGCAT
CCTGGGCGCTACGAGCTTGGCTCCCGTGCCTGGCCAATTCGACGATGCTC
CAACCTCGCGCGTGGGCACTGAGGTCACTACCTACGACGAATTCGGACGT
CCCAGGCTTGCTGGAGACTTATCGGGAGAACGATTGAACGGTGGCGAGAC
CGGTAGCCGTGGTGGAAGCAATGGGGCTGGTGGTGGTGGTGGTGGTGGTG
GTGGGGAGGATAATGGCAGGGAGCGGGAGCGCGACGGTAGGGACAGAGAC
AGAGACAGAGATCGGCGAGACCGGGACAGAGAGCGAAGTAGGGGAGGAGG
GGGAGGTGGAGGCGAGAAAGATAGGGACAGAGATAGACGAAGGGAGCGAA
GCAGAGATCGGCGAGACCGGGACAGAGAGCGAAGTAGGGGAGGAGGGGGA
GGTGGAGGCGAGAAAGATAGGGACAGAGATAGACGAAGGGAGCGAAGCAG
GAGCAGGGAGAGGGGAGGACGGGATGATAAGGAGAAGGACAGGTCCAGCA
GAAGGCGACGCAGTCGCTCAAGGAGCCGCGACCGCAGGCGCTGAGAGCAG
GGAGAGGGGAGGACGGGATGATAAGGAGAAGGACAGGTCCAGCAGAAGGC
GACGCAGTCGCTCAAGGAGCCGCGACCGCAGGCGCTGA back to top
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