mRNA_H-paniculata_contig2587.7051.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A6H5KIP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIP7_9PHAE) HSP 1 Score: 344 bits (882), Expect = 1.220e-102 Identity = 177/234 (75.64%), Postives = 193/234 (82.48%), Query Frame = 3
Query: 1071 SGMMEAENDDNQHWVRRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMWWNPINSKFLQAELTEMD--IDYEGLVHCAPSPV--ASS--KRVPCSLHGNGE 1754
SGM+EAE D NQHWVRRSVRAAG+S +DS HVVKLL QIR+NDPEVEVLKLHHYLGPDVNTAVIDAVLEA+ VN NCQALYIQNFNEGFR+EQV LA VLR+G IWCLNAGENYKV L TWW FVE IK+TNVTHAYLSEHVIT +LK AMR AIR+NR KHTRHK+A+NL VIRRCTNMWWNPINSKFLQAEL +D + G++ ASS KRVPCSLH E
Sbjct: 643 SGMVEAEADGNQHWVRRSVRAAGSSALDSAHVVKLLEQIRANDPEVEVLKLHHYLGPDVNTAVIDAVLEALMVNDNCQALYIQNFNEGFRDEQVGALAKVLRRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSAANLEVIRRCTNMWWNPINSKFLQAELKVLDGGNSFSGMLSIMAQGTDGASSLAKRVPCSLHWREE 876
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: D7FZY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY3_ECTSI) HSP 1 Score: 325 bits (834), Expect = 1.840e-100 Identity = 203/360 (56.39%), Postives = 228/360 (63.33%), Query Frame = 3
Query: 693 WTEGPFSLRCLPAEALAALQEAGAAGGMDTDLLEAAVVATGEGPSEKPCDDFIVTTVKDGKGRRATTXXXXXXXXXXXXXTVRPKRETHVLVSES--------EGEEPGGTSAT--------------------------------------------WRGLEEAAREEAKALLLARNSGMMEAENDDNQHWVRRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMW 1616
W +G +SLR LPAE LAALQ AGAA GMD L+AA V + RA XXXXXXXXXXX RE + + +G GG++A W GLE AA+ EA+A++ + SGM+EAE D NQHWVRRSVRAAG+S +DS HVVKLL QIR+NDPEVEVLKLHHYLGPDVNTAVIDAVLEA+ VN NCQALYIQNFNEGFR+EQV LA VL +G IWCLNAGENYKV L TWW FVE IK+TNVTHAYLSEHVIT +LK AMR AIR+NR KHTRHK+ASNL VIRRCTNMW
Sbjct: 111 WGQGMYSLRWLPAEGLAALQAAGAACGMDRASLDAA------------------GAVAEAAAARAEQERXXXXXXXXXXXXXIADREAYEAAANGTGPVMWGYDGYYDGGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAGLEAAAKAEAEAIMSYKKSGMVEAEADGNQHWVRRSVRAAGSSALDSAHVVKLLEQIRANDPEVEVLKLHHYLGPDVNTAVIDAVLEALMVNDNCQALYIQNFNEGFRDEQVEALAKVLGRGNIWCLNAGENYKVKLATWWQFVEAIKNTNVTHAYLSEHVITAELKKAMRKAIRDNRVKHTRHKSASNLEVIRRCTNMW 452
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A835ZG86_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG86_9STRA) HSP 1 Score: 243 bits (621), Expect = 3.420e-65 Identity = 134/249 (53.82%), Postives = 164/249 (65.86%), Query Frame = 3
Query: 969 SESEGEEPGGTSATWRGLEEAAREEA------KALLLARNSGMME--------------AENDDNQHWVRRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLR-QGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMWWNPINSKFLQAE 1652
S S+ E G + W LEE ARE A K LL SG E+ D +RRS RAAG Q+DS V KLLA +R++ +VEVLKLHHYL PD NTAV+DAVL+A++ NTNCQALY+QNFN G ++Q+ LA++LR R+WCLN GE YKV L+ WW F EE++ T+VTH YLSEHV+T DLK AMRDAIR NR KH HK+ NL+VI RCTNMWWNPIN++ LQ +
Sbjct: 543 SGSDEEGSGARAFDWCRLEEQAREVAAMIMAQKRLLGKGASGAAGXXXXXXXXXXXXAMGEDTDEDVCLRRSARAAGGGQLDSICVQKLLANLRADHRDVEVLKLHHYLSPDANTAVMDAVLDALASNTNCQALYMQNFNSGVTDDQIDALAAILRTHDRLWCLNLGELYKVTLDRWWKFCEELRGTHVTHMYLSEHVLTADLKTAMRDAIRANRAKHALHKDVDNLAVIERCTNMWWNPINARDLQGD 791
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A6H5JNB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB8_9PHAE) HSP 1 Score: 244 bits (622), Expect = 3.460e-65 Identity = 119/189 (62.96%), Postives = 148/189 (78.31%), Query Frame = 3
Query: 1116 RRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMWWNPINSKFLQAELTEMDIDYEG 1682
RRS R G S ++SP VV+LL QIR++DP V+VLKLH Y+ DV T +IDAVLEA+ +N+NCQALYIQN + GFR+EQ+ +LA VLR+G IWCLNAGEN ++ TWWNFVEEI++TNVTHAYLSE + LKNAM+ AIR NR KH RH +ASN+ VI+RCT+MWWNPI SK LQAEL ++ +G
Sbjct: 570 RRSGRVVGFSALESPSVVRLLDQIRADDPRVKVLKLHDYIPADVGTIIIDAVLEALMINSNCQALYIQNVSNGFRDEQLMRLAEVLRRGLIWCLNAGENSEIKASTWWNFVEEIQNTNVTHAYLSEGSVPSGLKNAMQKAIRRNRLKHDRHLSASNVDVIQRCTHMWWNPIRSKKLQAELKAAEVAAKG 758
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A6H5KUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUR8_9PHAE) HSP 1 Score: 233 bits (595), Expect = 1.580e-61 Identity = 118/180 (65.56%), Postives = 140/180 (77.78%), Query Frame = 3
Query: 1116 RRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMWWNPINSKFLQAEL 1655
RRS R G+S ++SP VV+LLAQIR++DP VEVLKLH+Y+ DV T VIDAVLEA+ +N NCQALYIQN + G R+EQ+ LA VLR+G IWCLNAGEN K+ TW +FV+EI+ T VTHAYLSE I LK AMR AIR NR KHTRHK+ASN+ VIR+CTNMWWNP+ K QAEL
Sbjct: 705 RRSSRVVGSSALESPSVVRLLAQIRTDDPRVEVLKLHNYIPADVCTPVIDAVLEALMLNNNCQALYIQNVSNGLRDEQLMMLARVLRKGNIWCLNAGENSKIKPSTWCDFVKEIEKTGVTHAYLSEECIPVGLKKAMRTAIRANRVKHTRHKSASNVKVIRQCTNMWWNPVLCKESQAEL 884
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A6H5K7R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R7_9PHAE) HSP 1 Score: 233 bits (594), Expect = 3.350e-61 Identity = 122/187 (65.24%), Postives = 143/187 (76.47%), Query Frame = 3
Query: 1095 DDNQHWVRRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMWWNPINSKFLQAEL 1655
+D+ RRS R G+S ++SP VV LLAQIR++DP VEVLKLH+Y+ DV+T VIDAVLEA+ +N NCQALYIQN + G R+EQ+ LA VLR+G IWCLNAGEN K+ TW +FV+EI T VTHAYLSE I LK AMR AIR NR KHTRHK+ASN+ VIRRCTNMWWNPI K LQAEL
Sbjct: 759 EDDISVPRRSSRVVGSSALESPSVVHLLAQIRTDDPRVEVLKLHNYIPADVSTPVIDAVLEALMLN-NCQALYIQNVSNGLRDEQLMMLAKVLRKGNIWCLNAGENSKIKPSTWCDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIRRCTNMWWNPILCKELQAEL 944
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A7S2G2D6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G2D6_9STRA) HSP 1 Score: 210 bits (534), Expect = 5.190e-57 Identity = 98/178 (55.06%), Postives = 131/178 (73.60%), Query Frame = 3
Query: 1110 WVRRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMWWNPINSKFL 1643
WVRRS+RA+G + S ++ +LL +IR N + VLKL YLGP+VNT +ID++L+A+ VN+NCQALYIQNFN+G + Q+ KL+ VL+ GRIWCLN GENY++ W F + + +TNVTH Y SEHVI+ + K MRD IR NR KH+RH + N++VI+RCTN WWNPI S+ L
Sbjct: 45 WVRRSIRASGQGMLQSRNLNELLDKIRDNHSDAVVLKLKDYLGPEVNTWIIDSILDALMVNSNCQALYIQNFNDGMLDVQLQKLSKVLQLGRIWCLNIGENYRITPGAWNQFADSLLATNVTHMYASEHVISVEQKTRMRDIIRANRAKHSRHNSIDNIAVIKRCTNCWWNPIQSRSL 222
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: D8LFH6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH6_ECTSI) HSP 1 Score: 207 bits (526), Expect = 8.290e-57 Identity = 104/167 (62.28%), Postives = 127/167 (76.05%), Query Frame = 3
Query: 1116 RRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMW 1616
RRS R G+S ++ VV+LL QIR++DP VE+LKLH YL DV+T +I+AVL+A+ N+NCQALYIQN + GFR+EQ+ LA VLR+G IWCLNAGEN + WW FVEEIK+T+VTHAYLSE I L M+ AIR NR KHTRHK+ASN+ VIRRCTNMW
Sbjct: 200 RRSNRVPGSSALERTSVVRLLDQIRADDPRVEILKLHDYLPADVSTPIINAVLKALMCNSNCQALYIQNVSIGFRDEQLRMLAKVLRRGNIWCLNAGENSGITPSAWWWFVEEIKTTSVTHAYLSEECIPCGLTETMQKAIRANRAKHTRHKSASNVEVIRRCTNMW 366
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A6H5JA48_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA48_9PHAE) HSP 1 Score: 205 bits (522), Expect = 2.770e-56 Identity = 105/161 (65.22%), Postives = 125/161 (77.64%), Query Frame = 3
Query: 1116 RRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIR 1598
RRS R G+S ++ P VV+LLAQIR++DPEVEVLKLH+Y+ DV+T VIDAVLEA+ +N NCQALYIQN + G R+EQ+ LA VLR+G IWCLNAGEN K+ TW +FV+EI T VTHAYLSE I LK AMR AIR NR KHTRHK+ASN+ VIR
Sbjct: 200 RRSSRVVGSSALEPPSVVRLLAQIRTDDPEVEVLKLHNYIPADVSTPVIDAVLEALMLNNNCQALYIQNVSNGLRDEQIMMLAKVLRRGNIWCLNAGENSKIKPSTWRDFVKEIDKTGVTHAYLSEECIPIGLKKAMRTAIRANRVKHTRHKSASNVKVIR 360
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Match: A0A7S0BXF2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BXF2_9STRA) HSP 1 Score: 195 bits (495), Expect = 1.680e-52 Identity = 98/215 (45.58%), Postives = 134/215 (62.33%), Query Frame = 3
Query: 1098 DNQHWVRRSVRAAGASQVDSPHVVKLLAQIRSNDPEVEVLKLHHYLGPDVNTAVIDAVLEAISVNTNCQALYIQNFNEGFREEQVAKLASVLRQGRIWCLNAGENYKVGLETWWNFVEEIKSTNVTHAYLSEHVITPDLKNAMRDAIRENRRKHTRHKNASNLSVIRRCTNMWWNPINSKFLQAELTE--------MDIDYEGLVHCAPSPVASS 1718
+ WVRRS+R + PH+ + +++ N ++ V KL +L PD V+DAVL+A+ NTNCQ+LYIQNFNEG R++QV +L ++L++G IWC+N GE YKV +TW F ++ TNVTH Y SEH I +LK+ +R IR+NR KH H + NL VI +CT+ WWNPIN+K LQ L +D D +GL PSP SS
Sbjct: 132 NKNQWVRRSIRQPCQDLLQKPHIKSCITKLKKNADDMVVCKLKVWLSPDTPMLVMDAVLDALDNNTNCQSLYIQNFNEGMRDKQVLRLLTILKKGHIWCINIGETYKVRSKTWEKFARGLRKTNVTHMYASEHTIDTELKDKIRGIIRQNRMKHRLHISPDNLDVIVQCTHCWWNPINAKALQPVLKASRGKYEKWLDADVQGL----PSPEKSS 342 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2587.7051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2587.7051.1 >prot_H-paniculata_contig2587.7051.1 ID=prot_H-paniculata_contig2587.7051.1|Name=mRNA_H-paniculata_contig2587.7051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=608bp MGYGLTAGLAASSPAFSYPTTHGIHGQSGSSGGGWYQGVDRNNGNGAPVRback to top mRNA from alignment at H-paniculata_contig2587:195..8489- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2587.7051.1 ID=mRNA_H-paniculata_contig2587.7051.1|Name=mRNA_H-paniculata_contig2587.7051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8295bp|location=Sequence derived from alignment at H-paniculata_contig2587:195..8489- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2587:195..8489- >mRNA_H-paniculata_contig2587.7051.1 ID=mRNA_H-paniculata_contig2587.7051.1|Name=mRNA_H-paniculata_contig2587.7051.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3648bp|location=Sequence derived from alignment at H-paniculata_contig2587:195..8489- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |