mRNA_H-paniculata_contig258.7029.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig258.7029.1
Unique NamemRNA_H-paniculata_contig258.7029.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A6H5L486_9PHAE (TMP-TENI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L486_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 2.380e-65
Identity = 127/224 (56.70%), Postives = 156/224 (69.64%), Query Frame = 3
Query:  603 LNRPVLAQITPDGSCSSTTS--TRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAMR 1268
            L  P+L  ITPDG  SS+ S  + L+ +I +AV GGV LVQLRDYK+ A+SK +LA RI   + G  +L VVN   G+    R  GADGVHLPER +  L G        +  WP +VGCSVHS  AA+EAARLGADYVQVGT+FATQSHPGK PEGV +L++VRR+L  EGL  VLV+GVGGI+  NCG  +AAG DGVAAIRCLC S D + +A+ ++  MR
Sbjct:  100 LAPPLLELITPDGCASSSFSETSSLVKNIQKAVAGGVSLVQLRDYKSGAKSKADLAVRISTALKGR-ALFVVN---GEPDTARANGADGVHLPERMMDRLVGL-----RGQGEWPRIVGCSVHSVAAAVEAARLGADYVQVGTMFATQSHPGKTPEGVGMLNDVRRQLQVEGLDVVLVLGVGGIDASNCGDVVAAGGDGVAAIRCLCSSSDAEGQARRIVQDMR 314          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A836CN05_9STRA (Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN05_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.970e-45
Identity = 108/218 (49.54%), Postives = 132/218 (60.55%), Query Frame = 3
Query:  612 PVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWP-AVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLG------RVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREA 1244
            PVL  ITPDGS +   ST L   I  AV+GGV LVQ+RD  + AESK  LA ++   +   P  +V+N   G       CGA GVHLPER +  +         TR+    AVVGCSVHS  AA+ AARLGADY+QVGT+FATQ+HPGK PEG  LL+ +R  L+           RVL++GVGGIN  NC + + AG DGVAAIR LC +D  D  A
Sbjct:   42 PVLELITPDGSAAQP-STHLAQKIRAAVSGGVRLVQIRDTTSSAESKHALATQLLLDLAAEPCCIVLN---GGVDAALACGAHGVHLPERLLPEV---------TRAREALAVVGCSVHSVEAAVAAARLGADYLQVGTMFATQTHPGKVPEGPQLLAAIRAALNQAHARGELSDKRVLLLGVGGINEANCAQVIQAGGDGVAAIRSLCGADGSDPRA 246          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A7S3XPQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPQ6_HETAK)

HSP 1 Score: 145 bits (367), Expect = 6.550e-36
Identity = 96/234 (41.03%), Postives = 124/234 (52.99%), Query Frame = 3
Query:  612 PVLAQITPDGSCSSTTSTR----LISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRV----------LVIGVGGINGENCGRAMAAGADGVAAIRCLCDSD---DGDREAKGMLDA 1262
            P L  ITP+G C+   S      ++S I  AV GGV LVQLRD  A  E    + +RIR V+D S ++ +VN   GD      C ADGVHLPE ++        IN+     +  V+GCSVHS+ AAL A  + ADY+ VGT+F T SHPGK PEG   L +++  + D                LV GVGGI+G+NC   +  G DGVA I  LC +D   D   E  G + A
Sbjct:    4 PFLCLITPEGLCTEKYSEEAKRIILSRIGLAVEGGVSLVQLRDKTATREELATMGKRIRDVVDRSSAIFMVN---GDLDVAIACKADGVHLPEAQVQDF-----INSYKNKKFNGVLGCSVHSSEAALRAMEVKADYIVVGTMFKTNSHPGKVPEGPESLKKIKLDMLDHSQNTKDSNGAEEKLPLVCGVGGIDGDNCIEVLKNGGDGVAMISTLCFADRPKDKAEEVTGFMAA 229          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A8J2X006_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X006_9STRA)

HSP 1 Score: 122 bits (305), Expect = 9.840e-26
Identity = 87/226 (38.50%), Postives = 116/226 (51.33%), Query Frame = 3
Query:  591 TDGI-LNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAM 1265
            TD + L R  L  +TP G  ++     L      A  GG  LVQLRD  A  +     A  +R  + G+   +V+N            G +  HLPER+           A  R   P  +GCS HS  A L AA LGADYVQ+GT+FATQ+HPGK PEG  L +E RR LD+      L+IGVGG++  N  + + AG DGVA IR + D+ D +  A+ +  A+
Sbjct:   46 TDALHLPRRPLVFVTPPGWAAADRRADLERVARAAAKGGASLVQLRDADASRDELQSAAAAVRDALQGTDCSVVIN------------GVE--HLPERKWRA--------ATERPNGP--LGCSAHSVEAVLAAAALGADYVQLGTMFATQTHPGKIPEGPGLATECRRALDEREA-PPLLIGVGGVDATNAAKLIEAGCDGVAVIRGISDARDPEAAARAICRAL 246          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A3D1M0A4_9CHLR (Thiamine-phosphate synthase n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3D1M0A4_9CHLR)

HSP 1 Score: 114 bits (285), Expect = 1.410e-25
Identity = 72/228 (31.58%), Postives = 119/228 (52.19%), Query Frame = 3
Query:  600 ILNRPVLAQITPDGSCSSTTSTRLISSIAR-AVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAMRITMV 1280
            ++N P+L  +T        TS R +  I   A++GGV ++Q RD  A    K+++AR +R++     + +V    +GD    ++ GADG+H PER+I       N+  N       ++G SVHS  +A +A   G +Y+ +GT+F + SHP     G  ++ E  R +       + +IG+GGI   NC + M AGA G+A I  + ++D   R A  +L+A+  + V
Sbjct:    5 MMNNPILCLVTNG----KRTSGRDLGFIVNEAISGGVNMIQFRDKDATEPEKLKMARNLRELAKDRAAFIV----NGDVDLAKEIGADGIHFPERQI-FDGPIDNLKENF------LIGKSVHSFESAAKATSEGMNYLMIGTIFPSASHPNGPVSGTGIIEESHRNIP------IPIIGIGGITEANCLQVMKAGAAGIAVIGAISEADSPKRAAHDILEALESSKV 211          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2H5YM77_9BACT (Thiamine-phosphate synthase n=1 Tax=bacterium HR25 TaxID=2035420 RepID=A0A2H5YM77_9BACT)

HSP 1 Score: 114 bits (284), Expect = 1.890e-25
Identity = 77/200 (38.50%), Postives = 110/200 (55.00%), Query Frame = 3
Query:  669 LISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAMR 1268
            L + +ARAV GGV +VQLR+    A   + LA  +R+  +G  SLLVVN +  D +     GADG+HLPER + + A    +          +VG SVHS   A+ AA  GADY+ VG+++AT+SHPG  P G+ LL EV  R+       + V+ +GGI  E     + AGA GVA I  +    + +  A+ +  A+R
Sbjct:   14 LTARVARAVAGGVDIVQLRERDMPAGELLSLALELREATEGR-SLLVVN-DRADVALAA--GADGLHLPERGLPVAAARRLLGEGR------LVGRSVHSLAEAVRAAEEGADYLVVGSIYATRSHPGASPAGLGLLREVAARVS------LPVLAIGGITAERVAEVVQAGASGVAVISAVLGQPEAEEAARRLGRALR 197          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A6L7Q5U4_9CHLR (Thiamine-phosphate synthase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L7Q5U4_9CHLR)

HSP 1 Score: 112 bits (279), Expect = 1.920e-24
Identity = 87/221 (39.37%), Postives = 115/221 (52.04%), Query Frame = 3
Query:  603 LNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAM 1265
            L  P L  +T    C       L   +A AV GGV LVQLRD +A     +E A  +R++I G   LLV    D   +     GADGV L E  + +        A T     AV+G SVHS   AL AA  GAD++ VGT+FAT+SHPG+EP G  LLS    R+   G+  + ++G+GGI  EN    MA+GA G A I  +  S+D +  A+ +  AM
Sbjct:    5 LPYPCLCLVTDRTVCPPD---ELPQRVAAAVAGGVDLVQLRDKEAPGGVLLEQAWDLREIIQGRALLLVNERADVALA----AGADGVQLGEMALPVD------EARTILGPGAVIGRSVHSVPGALHAAVNGADFLLVGTMFATRSHPGEEPSGPGLLS----RIASAGVA-IPMLGIGGITAENVAEVMASGASGAAVITGILASEDPETAARRLKSAM 207          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2H5YGE0_9BACT (Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YGE0_9BACT)

HSP 1 Score: 111 bits (277), Expect = 2.240e-24
Identity = 80/200 (40.00%), Postives = 109/200 (54.50%), Query Frame = 3
Query:  669 LISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPA-VVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLDAM 1265
            L  + ARAV GGV +VQLR+    A   + LA  +R  I G  +LLVVN +  D +     GADGVHLPE  + +           R + PA +VG SVHS  AA+ A   GADY+ VG ++ T+SHP     G  LLS+VRR +      RV V+ +GG+        +AAGA GVA I  +  S+D +  A+G+  A+
Sbjct:   27 LPQAAARAVAGGVNIVQLREKDLPARDLLALAAALRAAIAGR-ALLVVN-DRADVALAA--GADGVHLPEDGLPVAKA-------RRLVGPARLVGRSVHSVDAAVRAEADGADYIVVGPIYPTRSHPDAPAAGPGLLSQVRRAV------RVPVLAIGGVTAATAAEXLAAGASGVAVISAILGSEDPEAAARGLRSAL 209          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2E4QJS0_9CHLR (TMP-TENI domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2E4QJS0_9CHLR)

HSP 1 Score: 110 bits (276), Expect = 2.340e-24
Identity = 68/207 (32.85%), Postives = 116/207 (56.04%), Query Frame = 3
Query:  600 ILNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCD 1220
            +L+ P+L+ IT      +    +++++I +    GV +VQ+R+     E K +L ++I    D  P   ++ INDG Y   +    DG+HLPE++I  +      N  +   +  ++GCSVHS  +A+ A +LGA+Y+Q G++F T+SHPG+ P G++ L ++   ++      + VI VGGIN +NC      GA G+A+IR   +
Sbjct:    3 LLSFPILSLITDSSVYQN--KEKMVNNITQTTKVGVNMVQIREKNLSNEEKKKLIQKIIVKTDNKP---IIIINDG-YELCKVFDIDGIHLPEKKINQIK-----NLKSTLKYDQIIGCSVHSLKSAILAEKLGANYLQFGSIFKTKSHPGQNPLGLSELKKITANIN------LPVIAVGGINEKNCLLPFQNGAYGIASIRSFSE 192          
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Match: A0A2D9ZQG9_9CHLR (Thiamine-phosphate synthase n=4 Tax=root TaxID=1 RepID=A0A2D9ZQG9_9CHLR)

HSP 1 Score: 109 bits (273), Expect = 6.050e-24
Identity = 70/220 (31.82%), Postives = 118/220 (53.64%), Query Frame = 3
Query:  600 ILNRPVLAQITPDGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVIDGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSMWPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSEVRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGDREAKGMLD 1259
            I   P+L  +T       T+   L S +++AV GGV ++Q RD       ++  A ++R++ + S +L +VN   GD    +   ADG+H PE+ +   A    +  N       ++G SVHS   A++A   G DY+ VGT+F ++SHP  +  G  L+ ++ R+L       V +IG+GGI+ +NC   + +GA GVA I  + ++DD   E++ +L+
Sbjct:    5 IQKXPLLCLVTXRN---RTSQRGLESVVSQAVEGGVNMIQFRDTDMHXTERLHXAVKLREITE-SKALFIVN---GDIDLAKKAXADGIHFPEKHV-XXADTEKLKENF------ILGKSVHSLEMAIKAVSAGIDYLIVGTIFPSKSHPQGQASGTKLIEDISRKLS------VPLIGIGGISSKNCQEVIDSGASGVAVIGAISEADDPKLESRIILE 204          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig258.7029.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L486_9PHAE2.380e-6556.70TMP-TENI domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CN05_9STRA5.970e-4549.54Thiamine-phosphate pyrophosphorylase n=1 Tax=Tribo... [more]
A0A7S3XPQ6_HETAK6.550e-3641.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J2X006_9STRA9.840e-2638.50Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A3D1M0A4_9CHLR1.410e-2531.58Thiamine-phosphate synthase n=2 Tax=Chloroflexi Ta... [more]
A0A2H5YM77_9BACT1.890e-2538.50Thiamine-phosphate synthase n=1 Tax=bacterium HR25... [more]
A0A6L7Q5U4_9CHLR1.920e-2439.37Thiamine-phosphate synthase n=1 Tax=Chloroflexi ba... [more]
A0A2H5YGE0_9BACT2.240e-2440.00Thiamine-phosphate synthase n=2 Tax=Bacteria TaxID... [more]
A0A2E4QJS0_9CHLR2.340e-2432.85TMP-TENI domain-containing protein n=2 Tax=cellula... [more]
A0A2D9ZQG9_9CHLR6.050e-2431.82Thiamine-phosphate synthase n=4 Tax=root TaxID=1 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig258contigH-paniculata_contig258:28278..30942 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score226.9
Seed ortholog evalue1.4e-56
Seed eggNOG ortholog2880.D7FV85
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Thiamine monophosphate synthase
EggNOG OGs2S9Y2@2759,COG0352@1
Ec32 ortholog descriptionAldolase-type TIM barrel
Ec32 orthologEc-14_000170.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1575
Cds size963
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig258.7029.1prot_H-paniculata_contig258.7029.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig258 28555..30607 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929766.4400353-UTR-H-paniculata_contig258:28277..285541622929766.4400353-UTR-H-paniculata_contig258:28277..28554Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig258 28278..28554 -
1691481001.7559907-UTR-H-paniculata_contig258:28277..285541691481001.7559907-UTR-H-paniculata_contig258:28277..28554Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig258 28278..28554 -
1622929766.5021353-UTR-H-paniculata_contig258:30607..309421622929766.5021353-UTR-H-paniculata_contig258:30607..30942Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig258 30608..30942 -
1691481001.7968183-UTR-H-paniculata_contig258:30607..309421691481001.7968183-UTR-H-paniculata_contig258:30607..30942Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig258 30608..30942 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929766.4742873-CDS-H-paniculata_contig258:28554..288361622929766.4742873-CDS-H-paniculata_contig258:28554..28836Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 28555..28836 -
1691481001.7698977-CDS-H-paniculata_contig258:28554..288361691481001.7698977-CDS-H-paniculata_contig258:28554..28836Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 28555..28836 -
1622929766.487418-CDS-H-paniculata_contig258:29926..306071622929766.487418-CDS-H-paniculata_contig258:29926..30607Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 29927..30607 -
1691481001.783417-CDS-H-paniculata_contig258:29926..306071691481001.783417-CDS-H-paniculata_contig258:29926..30607Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig258 29927..30607 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig258.7029.1

>prot_H-paniculata_contig258.7029.1 ID=prot_H-paniculata_contig258.7029.1|Name=mRNA_H-paniculata_contig258.7029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=321bp
MLSTSGTFQILNVVAYLVVNVVQLPVVTVQTAHAPVPAPRFLHKPGRLGG
GNSKILFRPSGATKKILHPLTRPSCQQHEYQHGGDTDGILNRPVLAQITP
DGSCSSTTSTRLISSIARAVTGGVCLVQLRDYKADAESKIELARRIRQVI
DGSPSLLVVNINDGDYSWVRDCGADGVHLPEREIGLLAGFGNINANTRSM
WPAVVGCSVHSAFAALEAARLGADYVQVGTVFATQSHPGKEPEGVALLSE
VRRRLDDEGLGRVLVIGVGGINGENCGRAMAAGADGVAAIRCLCDSDDGD
REAKGMLDAMRITMVAPAGL*
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mRNA from alignment at H-paniculata_contig258:28278..30942-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig258.7029.1 ID=mRNA_H-paniculata_contig258.7029.1|Name=mRNA_H-paniculata_contig258.7029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2665bp|location=Sequence derived from alignment at H-paniculata_contig258:28278..30942- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTTGAATACCCTCTATATCGAAAACCACGCCACTCCTCCTGTAGCTTAT ACACCCCGCAGGTGTTGACTGCAGCGCAGACCCCCTACCTCTAATTAAAT AAACAGAAGTTTGGGGTAAGAAACCCCGAGGCAACGGCATTATCACTCCT GGATTAATGGGGTATGACGGTGATGAGTAGGGGTGAACAGCCCAACCTCG TCCACCATTGCATCTCCTCCTCCACTACTACTGCCGTCCATCCCCGCTTA CATTAGCTCTATCGAGCCGCATTCCCACCAAAAGAAGCTGCAAACACCAA CGTGTCGACTCGACCACTGACAAGCTGAAGGACACATGCTCTCGACATCG GGTACCTTTCAAATACTAAACGTCGTAGCATACCTTGTTGTAAATGTAGT ACAATTGCCGGTCGTTACTGTGCAAACCGCGCACGCTCCAGTACCAGCAC CTAGGTTTCTGCACAAACCAGGACGGTTGGGGGGGGGGAACAGCAAAATA CTCTTCCGTCCCAGCGGAGCTACCAAAAAAATATTACATCCACTAACTCG GCCATCATGCCAGCAGCATGAATACCAGCACGGTGGCGATACTGATGGTA TCCTCAACCGTCCTGTGCTAGCGCAAATCACTCCAGACGGTTCATGTTCG TCGACAACCAGCACTCGACTCATCAGCAGCATCGCAAGGGCAGTGACCGG CGGCGTCTGTCTCGTGCAGCTGCGAGACTATAAAGCTGACGCTGAAAGCA AAATCGAACTTGCCCGGCGAATACGCCAAGTGATAGATGGGTCTCCTTCC TTATTGGTAGTCAATATCAACGATGGCGACTATTCCTGGGTACGTGACTG TGGTGCCGATGGAGTGCATCTGCCCGAGCGCGAGATTGGTCTCCTGGCAG GTTTTGGAAATATCAACGCCAACACCCGCTCGATGTGGCCTGCTGTTGTA GGTTGCTCGGTGCATTCGGCATTTGCGGCACTGGAGGCTGCCAGGCTTGG GGCCGACTACGTCCAGGTACATATATGTACATGCAAAACATGTATCAAAT ATAGTAGCATCTGCGATTCGCATGGAGTTTGGCCACACTAGCTAGCGTGT GACCTGGTTACGGCACAAAGGCAGTGGTGGTTTTCACAGCAAATAATGTT TAATTTTTGCAACCGTACCAAAGTATTGGACTTCACGTGCAATTTATACT CTGCTGCAGACGAGAAGTAGGTATAGCAAATGGTTTTACAACTCTCTTGC AACTCTCCCATGGTTATGATTTGGCCAGTGCATTCATTCATTTATCATCA AATCGGCGCCCGGACAAAGTGTTCAAAATCGTCTGTACAGGATGCAAGAG TATACTGGATACTGATGTGATGACCCATGAAATAACGCCTATATGCGGGC GCAGCGAGCCCCTGTGCGTGAGTGTTATTGAAGTCAATTGCATTAACGAG TATAGACTACTCCAAGACCCCACACGTGGCCAGAGGTGTACCTTGTGCAT ATTGTAACGTTCACGCGGTAGTGAGGTCGGCAGTGTTTACACAACATATT AGAACGTTGTGGCGAGACGTTTTATGCACGTTGTCAACCTCGCGGCAACG TGGGACGTTGTAATATCCGCAACAAGGTACTCACAAGGTCCCCTTGGCCA CGTGTGCCGTTCTATTTCCCATTGAAATGATTGAGGTGTGATGAACTCTC AACCAAAATGGAAAATCATGCTCGGCGTTTAGAATGACTCAAAGCCTCAA CCCCTTGCAAAACGTTTTGCATGCGAGAGTAGAGAGAGGGTACACAAAGT ACGTACGGCGATAGCGTTGTCGCTTCTGGCGTAGCCCTGACCTACCTTAT TTTGTAGCTCGTTCTAAGACTTTCAATGGCGCACAATATATATAAAGATC TGTTGCACATACTCTACGTCGATATATTGCACATGCAACTTATCTTACTT GTATTTCTGGCCTTTTATAGCGCAGCAACACTATGCATTCGCAGCAACCA AGCCTTGAAATATAAAGGCCTCCTCGTGTTGTCGCAACTGCAGCACAGTA TCGAAAATGGTGTACGAAACAGCTATACATGTCTGTGTGCTCTCGAATCA CGATAGGTGGGGACTGTGTTTGCGACTCAGTCGCACCCGGGCAAGGAACC TGAAGGGGTGGCACTATTAAGCGAGGTGCGGCGACGGCTCGATGACGAAG GTCTGGGGCGTGTGTTGGTGATAGGTGTGGGGGGTATAAATGGCGAAAAC TGCGGGCGTGCTATGGCGGCAGGTGCCGATGGCGTAGCTGCCATTCGATG CTTGTGTGATAGTGATGATGGCGATCGAGAGGCCAAGGGAATGTTGGATG CTATGAGGATAACTATGGTCGCTCCTGCTGGACTGTAGCCAGCTAACGTG CGAATCGGGTGCCGTGATTCACTGTCGACCAACCACCGGAAAGCGTTTAC GATTCATGTTGTCCAGGTGTAGACTTCTTGGAAATGTCGCCGACGATGAC AGTTGAACAGGGAAATAATTGCTCTGCCCAATGACGTCATGAGAAATTAC CGAACTACCAGGAGTGCAAGACATTTCAACGTTGACTTGTGCGTGCTCTG AAATAGCTCAGGCGTGTTCAAGCCAGAGCGACAATCTGAAAATCTAAAAC GTAGTGCAAGGTGGA
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Coding sequence (CDS) from alignment at H-paniculata_contig258:28278..30942-

>mRNA_H-paniculata_contig258.7029.1 ID=mRNA_H-paniculata_contig258.7029.1|Name=mRNA_H-paniculata_contig258.7029.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1926bp|location=Sequence derived from alignment at H-paniculata_contig258:28278..30942- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTCTCGACATCGGGTACCTTTCAAATACTAAACGTCGTAGCATACCT
TGTTGTAAATGTAGTACAATTGCCGGTCGTTACTGTGCAAACCGCGCACG
CTCCAGTACCAGCACCTAGGTTTCTGCACAAACCAGGACGGTTGGGGGGG
GGGAACAGCAAAATACTCTTCCGTCCCAGCGGAGCTACCAAAAAAATATT
ACATCCACTAACTCGGCCATCATGCCAGCAGCATGAATACCAGCACGGTG
GCGATACTGATGGTATCCTCAACCGTCCTGTGCTAGCGCAAATCACTCCA
GACGGTTCATGTTCGTCGACAACCAGCACTCGACTCATCAGCAGCATCGC
AAGGGCAGTGACCGGCGGCGTCTGTCTCGTGCAGCTGCGAGACTATAAAG
CTGACGCTGAAAGCAAAATCGAACTTGCCCGGCGAATACGCCAAGTGATA
GATGGGTCTCCTTCCTTATTGGTAGTCAATATCAACGATGGCGACTATTC
CTGGGTACGTGACTGTGGTGCCGATGGAGTGCATCTGCCCGAGCGCGAGA
TTGGTCTCCTGGCAGGTTTTGGAAATATCAACGCCAACACCCGCTCGATG
TGGCCTGCTGTTGTAGGTTGCTCGGTGCATTCGGCATTTGCGGCACTGGA
GGCTGCCAGGCTTGGGGCCGACTACGTCCAGATGCTCTCGACATCGGGTA
CCTTTCAAATACTAAACGTCGTAGCATACCTTGTTGTAAATGTAGTACAA
TTGCCGGTCGTTACTGTGCAAACCGCGCACGCTCCAGTACCAGCACCTAG
GTTTCTGCACAAACCAGGACGGTTGGGGGGGGGGAACAGCAAAATACTCT
TCCGTCCCAGCGGAGCTACCAAAAAAATATTACATCCACTAACTCGGCCA
TCATGCCAGCAGCATGAATACCAGCACGGTGGCGATACTGATGGTATCCT
CAACCGTCCTGTGCTAGCGCAAATCACTCCAGACGGTTCATGTTCGTCGA
CAACCAGCACTCGACTCATCAGCAGCATCGCAAGGGCAGTGACCGGCGGC
GTCTGTCTCGTGCAGCTGCGAGACTATAAAGCTGACGCTGAAAGCAAAAT
CGAACTTGCCCGGCGAATACGCCAAGTGATAGATGGGTCTCCTTCCTTAT
TGGTAGTCAATATCAACGATGGCGACTATTCCTGGGTACGTGACTGTGGT
GCCGATGGAGTGCATCTGCCCGAGCGCGAGATTGGTCTCCTGGCAGGTTT
TGGAAATATCAACGCCAACACCCGCTCGATGTGGCCTGCTGTTGTAGGTT
GCTCGGTGCATTCGGCATTTGCGGCACTGGAGGCTGCCAGGCTTGGGGCC
GACTACGTCCAGGTGGGGACTGTGTTTGCGACTCAGTCGCACCCGGGCAA
GGAACCTGAAGGGGTGGCACTATTAAGCGAGGTGCGGCGACGGCTCGATG
ACGAAGGTCTGGGGCGTGTGTTGGTGATAGGTGTGGGGGGTATAAATGGC
GAAAACTGCGGGCGTGCTATGGCGGCAGGTGCCGATGGCGTAGCTGCCAT
TCGATGCTTGTGTGATAGTGATGATGGCGATCGAGAGGCCAAGGGAATGT
TGGATGCTATGAGGATAACTATGGTCGCTCCTGCTGGACTGTAGGTGGGG
ACTGTGTTTGCGACTCAGTCGCACCCGGGCAAGGAACCTGAAGGGGTGGC
ACTATTAAGCGAGGTGCGGCGACGGCTCGATGACGAAGGTCTGGGGCGTG
TGTTGGTGATAGGTGTGGGGGGTATAAATGGCGAAAACTGCGGGCGTGCT
ATGGCGGCAGGTGCCGATGGCGTAGCTGCCATTCGATGCTTGTGTGATAG
TGATGATGGCGATCGAGAGGCCAAGGGAATGTTGGATGCTATGAGGATAA
CTATGGTCGCTCCTGCTGGACTGTAG
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