mRNA_H-paniculata_contig2571.7003.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: D8LCS2_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS2_ECTSI) HSP 1 Score: 633 bits (1633), Expect = 1.120e-205 Identity = 431/841 (51.25%), Postives = 476/841 (56.60%), Query Frame = 3
Query: 459 FEPNSTNCSLDRFMEALEALSPAGDNHTMLQHLDKRQSI-----------------GNDSFIGGG---------------HRMSCGSNSSI--IGINSVMGLGPNSAVGTHS-------------LLSPCSPGLLTPNDRQQHQQHQHGHFTRARR-SPCKREDDSGGAAAVSPLSRTGGAXXGALVARRSLSCSPSCSSKRKRSYTQLLTGGDENGAPSPFPHDGSSKSTSRALSKSQLTIHQDGAYMQVVFDETHRFACEEDPPDLALLHPTMMAMG-VADTNAGAGGRNDIDQALSLLKLSGGTSTSQTEFLRSTRRLSGGKGMV----------GPGNDDPRTSRSPQEFNENIMPGSSMVATSAVSXXXXXXXXXXXXXXXXXXXTTSGWPFVSHAPLSPFTAPSLHAQEQXXXXXXXXXXXXSLSTAPDEGDFSKSHPSTAALDAAAATAATRLLGKPPEPPAVASGRIKSKATVTRTGNCGDAHRPASGNTAKISKTVKTIKATSTKGVT---KGKPKPRGTGGGQRPAVQAPVSTPQGTVGGGPGSFCSKPEALSQLDTSQSELMVLDADLWIVRERGDLCSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLTEANVEPYLPEAWTEQETGVLEHLVGIYGPTHWSTIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGAWSRQ-----------------EDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK 2744
FEPN SLD+FME+L SP G HLDKRQS+ N S+ GG R S G +SS+ + I S G + HS L + S GL TP +H GHFTR RR SP K + S A A KRKR+Y+QL T GDENGAPSPFP DG K+ SR LS S+LT+H+DGAYMQV FD+THRFA EEDP L ++M +A G R DIDQALSLL+LSGG S SQ++ RS RR SG GP N + Q+ EN++P SS A +A + P H + + S XXXXXXXXXXXX KGKPK +G GGQRPAVQAPVS PQGT GGGPGSFCSKPEALSQLDTSQS+LMVLDADLWIVRERG+ CSSNECIYKDK+TG+SSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIR LHKKTPAEAVL E NVEPYLP+ WTEQE VL HLVG+YGPT+W I+AGVATK+ETQCMLHWRFALNGNATVKGTGTWQ VED+RMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDP+LRRGAWSR+ EDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK
Sbjct: 18 FEPN---YSLDKFMESLGTFSPDGQP----LHLDKRQSLESNSSMTPFGGSTARRSSNGSYAGGATAPGSCARATPNLRLRRSSAGGDSSVSRMSIGSGNGASEDGRSNNHSGSSTAAVSSTTASLSNASSTGLKTPRSSARH-----GHFTRVRRNSPVKLDPSSSPARA-------------GXXXXXXXXXXXXXXPKRKRNYSQLATFGDENGAPSPFPSDGGPKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPQMNQPLGESLMNDPFLATPEPTTGSRKDIDQALSLLQLSGG-SGSQSDLTRSARRSSGXXXXXXXXXXXXXTPGPANHGLFPPLNSQDLVENVVPASSSGAGAASQAGAGPSFSSVTSPRSARGGWGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQKGKPKAKGHVGGQRPAVQAPVSKPQGTKGGGPGSFCSKPEALSQLDTSQSDLMVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVATKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREARNKKQRVLCAYVGKGLEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK 832
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: A0A6H5JLY2_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLY2_9PHAE) HSP 1 Score: 602 bits (1553), Expect = 2.660e-192 Identity = 425/856 (49.65%), Postives = 475/856 (55.49%), Query Frame = 3
Query: 363 REGRYSMSPVSALGSPMSVSGSCGVFGSRRESFEPNSTNCSLDRFMEALEALSPAGDNHTMLQHLDKRQSIGNDSFI----------------GGG----------------HRMSCGSNSSIIGINSVMGLGPNSAVGTHSLL---------------SPCSPGLLTPNDRQQHQQHQHGHFTRARR-SPCKREDDSGGAAAVSPLSRTGGAXXGALVARRSLSCSPSCSSKRKRSYTQLLTGGDENGAPSPFPHDGSSKSTSRALSKSQLTIHQDGAYMQVVFDETHRFACEEDPPDLALLHPTMMAMG-VADTNAGAGGRNDIDQALSLLKLSGGTSTSQTEFLRSTRRLSGGKGMVGPGNDDPRTSRSPQEFNENIMPGSSMVATSAVSXXXXXXXXXXXXXXXXXXXTTSGW----PFVSHAPLSPFTAPSLHAQEQXXXXXXXXXXXXSLSTAPDEGDFSKSHPSTAALDAAAATAATRLLGKPPEPPAVASGRIKSKATVTRTGNCGDAHRPASGNTAKISKTVKTIKATSTKG--------VTKGKPKPRGTGGGQRPAVQAPVSTPQGTVGGGPGSFCSKPEALSQLDTSQSELMVLDADLWIVRERGDLCSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLTEANVEPYLPEAWTEQETGVLEHLVGIYGPTHWSTIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGAWSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALKA 2747
RE SP S L SPMS G R S +N SLD+FME+L SP G HLDKRQS+ ++S + GGG R S G +SS+ ++ G G + ++ + S GL TP +H GHFTR RR SP K + S SP SR G RR + S S S KRKR+Y+QL T GDENGAPSPFP DG SK+ SR LS S+LT+H+DGAYMQV FD+THRFA EEDP L ++M +A G R DIDQALSLL+LSGG+ + Q+ EN++PGSS A A S W P H + + S XXXXXXXXXXXX KGKPK +G GGQRPAVQAPVS PQGT GGGPGSFCSK S+LMVLDADLWIVRERG+ CSSNECIYKDK+TG+SSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIR LHKKTPAEAVL E NVEPYLP+ WTEQE VL HLVG+YGPT+W I+AGV TK+ETQCMLHWRFALNGNATVKGTGTWQ VED+RMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDP+LRRGAWSR+EDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALK+
Sbjct: 16 REEMVGCSPAS-LNSPMS--GGXXXXXXRARSGGAFESNYSLDKFMESLGTFSPDGQP----LHLDKRQSLESNSSMTPFGGSTARRSSNGSHGGGATAPGSCARATPNLRLRRSSAGGDSSVSRMSIGSGNGASEDGRSNXXXXXXXXXXXXXXXXXSNTSSTGLKTPRSSARH-----GHFTRVRRNSPVKLDPSS------SP-SRAGSGR------RRREAASGSRSPKRKRNYSQLATFGDENGAPSPFPSDGGSKNASRVLSNSRLTVHKDGAYMQVTFDDTHRFAMEEDPHINQPLGDSLMNDPFLATPEPTTGSRKDIDQALSLLQLSGGSGS--------------------------------QDLVENVVPGSSSGA-GASSQAGAGPSFSSATSPRSARGGGGRWGAKSPAGVHGHMLHHPSCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQKGKPKAKGQVGGQRPAVQAPVSKPQGTKGGGPGSFCSK-----------SDLMVLDADLWIVRERGEHCSSNECIYKDKTTGISSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRTLHKKTPAEAVLNEGNVEPYLPQEWTEQEASVLAHLVGMYGPTNWGIISAGVGTKTETQCMLHWRFALNGNATVKGTGTWQSVEDERMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPELRRGAWSREEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALKS 802
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: A0A6H5KQ17_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ17_9PHAE) HSP 1 Score: 234 bits (598), Expect = 1.590e-63 Identity = 122/254 (48.03%), Postives = 161/254 (63.39%), Query Frame = 3
Query: 1995 LDADLWIVRERGDLCSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLTE-------ANVEPYLPEAWTEQETGVLEHLVG-IYGP-TH-WSTIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIF-----GQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGA-WSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNR 2708
LD DLW+V E+G +C+S +C Y+D + ++SRRHYH+ C H H GG K GM FHHHQLEK+QKHQR+H R K P + E A VE Y P W ++ET L+ LV + P TH W +IA TK+ QC+LHWRF LN N ++G GTW ED+R+ L +F G RW+ +AE MPGR AKQCRERY N++DP +++ W+ +ED ++QL + + FAKIA I GR Y+DVKNR
Sbjct: 210 LDKDLWVVVEKGSVCTSRDCTYRDAAR-IASRRHYHSNCTHTHNGGEKKGMAFHHHQLEKVQKHQRSHKREATKSAPYKRTTPEDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNR 462
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: D8LH85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH85_ECTSI) HSP 1 Score: 238 bits (608), Expect = 5.660e-63 Identity = 126/268 (47.01%), Postives = 170/268 (63.43%), Query Frame = 3
Query: 1995 LDADLWIVRERGDLCSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAVLTE-------ANVEPYLPEAWTEQETGVLEHLVG-IYGP-TH-WSTIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIF-----GQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGA-WSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQ-ISRQIAALKA 2747
LD DLW+V E+G +C+S +C Y+D + ++SRRHYH+ C H H GG K GM FHHHQLEK+QKHQR+H R K P + E A VE Y P W ++ET L+ LV + P TH W +IA TK+ QC+LHWRF LN N ++G GTW ED+R+ L +F G RW+ +AE MPGR AKQCRERY N++DP +++ W+ +ED ++QL + + FAKIA I GR Y+DVKNR++ + R+ A+KA
Sbjct: 339 LDKDLWVVVEKGSVCTSRDCTYRDAAR-IASRRHYHSNCTHTHNGGEKKGMAFHHHQLEKVQKHQRSHKREATKSAPYKRTTPEDHQAMEGAGVEGYRPTDWNQEETRKLDELVNQLVAPVTHAWPSIARYFPTKTGIQCLLHWRFTLNDNGIIRGNGTWGAEEDERLRKLAPVFSSPSTGPRWAKIAEVMPGRTAKQCRERYNNHVDPGIKKDKIWTAEEDALVMQLHAEHHNQFAKIARNIPGRCYDDVKNRFNLLVKRRQVAVKA 605
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: D7FJZ9_ECTSI (Putative c-myb-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ9_ECTSI) HSP 1 Score: 215 bits (548), Expect = 5.980e-57 Identity = 120/307 (39.09%), Postives = 169/307 (55.05%), Query Frame = 3
Query: 1992 VLDADLWIVRERGDLCSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAV-----------------------------------LTEANVEPYLPEAWTEQETGVLEHLVGIYGPTHWSTIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGA-WSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQIAALKASLNAKGWTPDETSDTKPEP 2804
+LD LW V ER +C++ +C Y+ + + RRHYHA C+H H+ G + GM F HHQLEK+QKHQRAH + T ++ + +ANVE + P+ WT + T L LV GP WS IA + K+ T CMLHWR +N + VKG+GTW ED+R+ LV++ G +WS +A H+PGR+AKQCRERYLN+LDP LR+ W+ E+ L++L + +A+I Q+ GRSYNDV+NR++ I R+ + S P T+ P P
Sbjct: 115 MLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQVSAKQNTQRSSIGSSAAKPRSPTTVAAAPRNKRVAAATSGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGPK-WSNIADKMPGKTATACMLHWRVGVNPDHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLARHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVQNRFNLIQRRNKRAQGSPTTTTTAPPATAQLAPLP 420
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: A0A6H5JMK3_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMK3_9PHAE) HSP 1 Score: 219 bits (557), Expect = 4.520e-54 Identity = 117/277 (42.24%), Postives = 161/277 (58.12%), Query Frame = 3
Query: 1992 VLDADLWIVRERGDLCSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAV------------------------------LTEANVEPYLPEAWTEQETGVLEHLVGIYGPTHWSTIAAGVATKSETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGA-WSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQ 2729
+LD LW V ER +C++ +C Y+ + + RRHYHA C+H H+ G + GM F HHQLEK+QKHQRAH + A + +ANVE + P+ WT + T L LV GP WS IA + K+ T CMLHWR +N N VKG+GTW ED+R+ LV++ G +WS +A+H+PGR+AKQCRERYLN+LDP LR+ W+ E+ L++L + +A+I Q+ GRSYNDVKNR++ I R+
Sbjct: 858 MLDPKLWTVVERRAVCTAKQCAYRSEEDHRARRRHYHALCNHVHQNGERKGMRFQHHQLEKVQKHQRAHQNTQTSSIGSSAAKPRSPTTVATAPRNKRVAAASNGQKEQTRAIKDANVEAHSPKDWTPELTKRLRDLVDELGPK-WSNIADKMPGKTATACMLHWRVGVNPNHMVKGSGTWTAEEDERLSKLVEVVGMKWSDLAKHIPGRIAKQCRERYLNHLDPSLRKDMPWTEDEEALLMRLCFAKQNQWAEICRQLHGRSYNDVKNRFNLIQRR 1133
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: A0A836CC17_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC17_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.620e-49 Identity = 112/277 (40.43%), Postives = 143/277 (51.62%), Query Frame = 3
Query: 1995 LDADLWIVRERGDLCSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRILHKKTPAEAV--------------LTEANVEPYLPEAWTEQETGVLEHLV----------GIYGPTHWSTIAAGVATK--------SETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPDL-RRGAWSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISR 2726
+D LW+ GD C + +C + +T +++RRHYHA CDHRH G K GM FHHHQLEKI+KHQR H R + E L A +E + W+ T L LV G G W +AA +A + S QCML WR +N ATV G GTW ED R+ LV F Q WS+VA +MPGR KQCRER+ N ++P L R G W+ +ED L + Q FA A + G SYNDVKNR++ + R
Sbjct: 1 IDPALWVRVNLGDRCEAAQCTLRAPATRLATRRHYHAKCDHRHGAGAKAGMRFHHHQLEKIRKHQRVHARRAAAASAEEQTWNSPSAVPPDVTEALAAAGLELHDVRVWSAAATDRLRGLVEAQQQRTSGGGAAGRVAWEAVAAALAAERGEGEAELSAAQCMLQWRAVVNQGATVTGVGTWCEPEDKRLAVLVAHFNQAWSSVARYMPGREPKQCRERFNNVVNPALLRSGPWTPEEDALLESMMQQTGHRFADAARCLPGHSYNDVKNRFNTLQR 277
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: A0A835YQW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW6_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.850e-48 Identity = 104/241 (43.15%), Postives = 135/241 (56.02%), Query Frame = 3
Query: 2037 CSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIRIL--------HKKTPAEAVLTEANVEPYLPEAWTEQETGVLEHLVGIYGP-----THWSTIAAGVA------TKSETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGAWSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVK 2702
C + C +D ++ V+ RRHYHA C+HRH GPK GM FHHHQLEKI+KHQ AH H A L +E + PEAW + T L+ LV GP + W +A T S QC+LHWR +N V G TW VED R+ SLV +FG +WS VA+ +PGR KQCRER+LN +DP R AW+ +EDE LL++ + FA+ A+ RSYN+V+
Sbjct: 18 CHAEMCTLRDDASLVARRRHYHARCEHRHSTGPKTGMRFHHHQLEKIRKHQSAHAAEASRDRGGAPHLDPSMMAELNSHGIELHNPEAWPPEATRHLDTLVR--GPVGRPSSAWGEFPRALAAALPGFTVSPQQCLLHWRLVINNGGAVTGVRTWSDVEDARLNSLVNMFGTKWSAVAQLLPGREPKQCRERFLNVVDPSKTRKAWTPEEDELLLRVHDRVRNQFARTAKYFSDRSYNEVR 256
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: A0A835ZA42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA42_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.400e-38 Identity = 93/222 (41.89%), Postives = 118/222 (53.15%), Query Frame = 3
Query: 2037 CSSNECIYKDKSTGVSSRRHYHATCDHRHKGGPKGGMIFHHHQLEKIQKHQRAHIR--ILHKKTPA--------------EAVLTEANVEPYLPEAWTEQETGVLEHLV-------GIYGPTHWSTIAAGVATK--SETQCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDP-DLRRGAWSRQEDEKLL 2624
C + +C + T +++RRHYHATC H H G K GM FHHHQLEKI+KHQRAH R ++ PA EA+L E Y P W+ L LV G+ G W +AA + S +QCMLHWR +NG A + G GTW ED R+ +L F Q W+T+A MPGR KQCRER+ N +DP +R W EDE L+
Sbjct: 4 CEAQDCTMRAAGTRLATRRHYHATCGHVHASGAKAGMRFHHHQLEKIRKHQRAHKRSSVIALTAPAPDSPYPGGLPVEVAEALLR-GGAELYDPALWSADAGARLGALVEQQHARRGV-GRVAWDKVAAAMRAPALSASQCMLHWRDVVNGGAIIMGVGTWCNAEDTRLRALTAHFRQSWATIARFMPGRGPKQCRERFNNVIDPASHKRAPWKPAEDELLM 223
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Match: A0A836CND7_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND7_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.570e-34 Identity = 64/118 (54.24%), Postives = 90/118 (76.27%), Query Frame = 3
Query: 2379 QCMLHWRFALNGNATVKGTGTWQPVEDDRMLSLVQIFGQRWSTVAEHMPGRLAKQCRERYLNNLDPDLRRGAWSRQEDEKLLQLRGQQNKSFAKIAEQIDGRSYNDVKNRWSQISRQI 2732
QC+LHWR+ALN + V+G G+W ED R+ +LV + G +W+ VA MPGR+AKQCRERYLN+LDP L+RG W+ +E++ LL+L QN+ +A+I Q+ GRSYNDVKNR++ I R++
Sbjct: 2 QCLLHWRYALNEDQQVRGIGSWSVEEDARLKALVTVHGCKWALVARSMPGRVAKQCRERYLNHLDPKLQRGPWTPEEEQVLLRLCEGQNRQWAEICRQLPGRSYNDVKNRYNLIQRRL 119 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2571.7003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2571.7003.1 >prot_H-paniculata_contig2571.7003.1 ID=prot_H-paniculata_contig2571.7003.1|Name=mRNA_H-paniculata_contig2571.7003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1078bp MANDTNNSTGGEKTQQQQQQQQQQLTVLSAREGRYSMSPVSALGSPMSVSback to top mRNA from alignment at H-paniculata_contig2571:2090..20757+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2571.7003.1 ID=mRNA_H-paniculata_contig2571.7003.1|Name=mRNA_H-paniculata_contig2571.7003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=18668bp|location=Sequence derived from alignment at H-paniculata_contig2571:2090..20757+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2571:2090..20757+ >mRNA_H-paniculata_contig2571.7003.1 ID=mRNA_H-paniculata_contig2571.7003.1|Name=mRNA_H-paniculata_contig2571.7003.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6468bp|location=Sequence derived from alignment at H-paniculata_contig2571:2090..20757+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |