mRNA_H-paniculata_contig2492.6773.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2492.6773.1
Unique NamemRNA_H-paniculata_contig2492.6773.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 3.510e-89
Identity = 142/276 (51.45%), Postives = 188/276 (68.12%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHIF-PTGQALERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDL-DVLEDADWAGVDGQRDREVAEPETDHGWVG 1219
            L  GN F D+  +S +S  T    FH+FC++FA ELY E+++ PTG+ L ++M +YDR+GF GAVGS DVTH  W  CP + AR YTGKEG  T+A+Q TV  SG  LAVT+ F GAT DK+IIRYD AV  +  DP Y ++ ++L+ ++G   E KG YLLVDNGYH+W  L+PPSK  +      +SK L+S RKDVE +FG+LKGRF+I KL I + + E +DNVFF CCILHNMLH+ D+  D+ E+ +WAG  G  +    +P TD+  VG
Sbjct:   91 LSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG 366          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 5.910e-89
Identity = 145/276 (52.54%), Postives = 185/276 (67.03%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHIF-PTGQALERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDLDVLEDA-DWAGVDGQRDREVAEPETDHGWVG 1219
            L  GNCF D+  +S +S  TA   FH+F  +FA E+Y EHIF PTG   +++M +YDRLGF+GA GS DVTH  W  CP + AR+YTGKEG+ T+AYQ TV  +   LAVT  F G+T DKSIIRYD AV  + EDP Y ++ F ++  +GT  + KG YLLVDNGYH+W  L+PPSK  +      +SK L+SVRKDVE FFG++KGRF+ILKL I Y + E +DNVFF CCILHNMLH+ D+   +E+  +WAG  G  +     P  D   VG
Sbjct:  166 LARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVG 441          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 1.200e-88
Identity = 143/278 (51.44%), Postives = 187/278 (67.27%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHIF-PTGQ--ALERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDLDVL-EDADWAGVDGQRDREVAEPETDHGWVG 1219
            LG GNCF  + Q+S MS  T Q +FHKFC+HFA E+Y EHI+ P+ Q   L+ +M +YDRLGF+GA+GS DVTH  W  CP + AR+YTGKEG  T+ YQ TV  +G A+AVT+ F  +T DK+ + +D  V+ +  D  Y ++TF ++NE+GT    KG YLLVDNGYH+W +LM P+K  L++    +SK L+SVRKDVE FFG+LKG F+I K+ + Y E E++DNVFF CCILHNMLHT D +D L E+  W    G       E E D   VG
Sbjct:  106 LGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVG 383          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 4.970e-88
Identity = 142/276 (51.45%), Postives = 188/276 (68.12%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHIF-PTGQALERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDL-DVLEDADWAGVDGQRDREVAEPETDHGWVG 1219
            L  GN F D+  +S +S  T    FH+FC++FA ELY E+++ PTG+ L ++M +YDR+GF GAVGS DVTH  W  CP + AR YTGKEG  T+A+Q TV  SG  LAVT+ F GAT DK+IIRYD AV  +  DP Y ++ ++L+ ++G   E KG YLLVDNGYH+W  L+PPSK  +      +SK L+S RKDVE +FG+LKGRF+I KL I + + E +DNVFF CCILHNMLH+ D+  D+ E+ +WAG  G  +    +P TD+  VG
Sbjct:  182 LSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVG 457          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 286 bits (731), Expect = 2.000e-87
Identity = 153/306 (50.00%), Postives = 194/306 (63.40%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHI-FPTGQA--LERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYC----------------------------DRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDLDVL-EDADWAGVDGQRDREVAEPETDHGWVG 1219
            LG GNCF  + Q+S MS  T Q +FHKFC HFA E+Y E I  PT ++  L+ +M +YDRLGFTGAVGS DVTH  W  CP + AR+YTGKEGF TIAYQ TV  +G A+AVT+ F G+T DK+I+ +D AV+ +  D  Y                             ++TF ++NE+GT    KG YLLVDNGYH+W +L+ PSK  L++    +SK L+SVRKDVE FFG+LKGRF+ILKL + Y+  E++DNVFF C ILHNMLHT D +D L E+ +W    G       EPE D G VG
Sbjct:   93 LGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVG 398          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 276 bits (707), Expect = 9.070e-85
Identity = 150/309 (48.54%), Postives = 186/309 (60.19%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHIF-PTGQALERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDLDVLED-ADWAGVDGQRDREVAEPETDHGWVGFR---------RNFGCDDGQTTRS*RSRSHISL 1291
            LG GNCFDDV QLS MS+S AQ  FHKFC HFA E++ EHI+ PTG  L+ +M  + +LG+TGA GS DVTH  W+ CP +  R++TGKEGF TIAY  TV   G  LAVT  F GAT DK+IIRYD  V  +     Y +R ++L    GT    +G +L+VDNGYHEW  L+ PSK    +E T +S+ L+SVRKDV        G F+ILKL + Y + E +DN+FF CCILHNMLHT D LDV E+  DW G  G  D    +P TD+  VG +             C +G   R  R   H  L
Sbjct:   44 LGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDV--------GCFRILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAEL 344          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 1.830e-82
Identity = 135/258 (52.33%), Postives = 175/258 (67.83%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHIFPTGQA---LERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDLDVLE-DADWAG 1159
            LG GN F  +  LS MS  T Q +FH+FCEHFA E+Y EHIF   +    L+R+M +Y++LGF GA+GS DVTH  W  CP +  R+YTGKEG  T+ YQ TV  +G  LAVT+ F G+T DK+II  D AV  +  D  Y ++ F +  ++GT    KG YL+VDNGYH+W ML+ PSK  L++    +SK L+SVRKDVE FFG+LK RF+ILKL + Y++ E++D VFF CCILHNMLHT D +  LE D +W G
Sbjct:  135 LGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVG 392          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 2.020e-77
Identity = 136/278 (48.92%), Postives = 176/278 (63.31%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHI-FPTGQA--LERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDLDVL-EDADWAGVDGQRDREVAEPETDHGWVG 1219
            LG GNCF  + Q+S MS  T Q +FHKFC  FA E+Y EHI  P  ++  L  +M +YDRLG                 CP + AR+YTGK+ F TIAYQ TV  +  A+AVT+ F G+T DK+I+ +D AV  +  D  Y ++TF L+NE+GT    KG Y L DNGYH+W +L+ PSK  L+++   +SK L+SVRKDVE FFG+LKGRF+ILKL + Y+  E++DNVFF CCILHNMLHT D +D L E+ +W    G       EPE D G  G
Sbjct:   28 LGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFG 288          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 9.770e-77
Identity = 126/243 (51.85%), Postives = 169/243 (69.55%), Query Frame = 2
Query:  503 LYHEHI-FPTGQA--LERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHTRDDLDVL-EDADWAGVDGQRDREVAEPETDHGWVG 1219
            +Y EHI  PT ++  L+ ++ +YDRLGFTGA+GS DVTH  W  CP + AR+YTGKEGF TI YQ TV  +G A+AVT+ F G+T DK+ + +D AV+ +  D  Y ++TF ++N++GT    KG Y+LVDNGYH+W +L+ PSK  L++    +SK L+SVRKDVE FFG+LKGR +IL L + ++  E++DNVFF CCILHNMLHT D +D L E+ +W    G     V EPE D G VG
Sbjct:    1 MYDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVG 243          
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 256 bits (653), Expect = 9.900e-77
Identity = 128/241 (53.11%), Postives = 163/241 (67.63%), Query Frame = 2
Query:  398 LGTGNCFDDVCQLSLMSESTAQVIFHKFCEHFALELYHEHIF-PTGQALERIMHEYDRLGFTGAVGSPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPGATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNGYHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLPIFYRENEKMDNVFFACCILHNMLHT 1117
            LG GNCFDDV QLS MSES AQ +FHKFC H A E++ EHI+ PTG  L+ +M  + +LG TGA GS DVTH   + CP +  R++TGKEGF TIAY+ TV  +G ALAVT  F G T DK+ IRYD  V  +  +  Y +R ++L    GT    +G +L+VDNGY+E            ++E T +S+ L+SVRKDVE FFG+LKGRF+ILKL + Y + E +DN+FF CCILHNMLHT
Sbjct:  140 LGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2492.6773.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY50_9PHAE3.510e-8951.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE5.910e-8952.54Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE1.200e-8851.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE4.970e-8851.45Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE2.000e-8750.00DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K796_9PHAE9.070e-8548.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.830e-8252.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE2.020e-7748.92DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
D7FSK2_ECTSI9.770e-7751.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSI7_9PHAE9.900e-7753.11DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2492contigH-paniculata_contig2492:1159..4376 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score253.8
Seed ortholog evalue9e-65
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1647
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2492.6773.1prot_H-paniculata_contig2492.6773.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2492 1539..2761 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929729.9205983-UTR-H-paniculata_contig2492:1158..15381622929729.9205983-UTR-H-paniculata_contig2492:1158..1538Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2492 1159..1538 -
1691480986.1690214-UTR-H-paniculata_contig2492:1158..15381691480986.1690214-UTR-H-paniculata_contig2492:1158..1538Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2492 1159..1538 -
1622929729.9616215-UTR-H-paniculata_contig2492:2761..28311622929729.9616215-UTR-H-paniculata_contig2492:2761..2831Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2492 2762..2831 -
1691480986.1982615-UTR-H-paniculata_contig2492:2761..28311691480986.1982615-UTR-H-paniculata_contig2492:2761..2831Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2492 2762..2831 -
1622929729.975442-UTR-H-paniculata_contig2492:4004..43761622929729.975442-UTR-H-paniculata_contig2492:4004..4376Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2492 4005..4376 -
1691480986.207068-UTR-H-paniculata_contig2492:4004..43761691480986.207068-UTR-H-paniculata_contig2492:4004..4376Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2492 4005..4376 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929729.934556-CDS-H-paniculata_contig2492:1538..19041622929729.934556-CDS-H-paniculata_contig2492:1538..1904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2492 1539..1904 -
1691480986.1813133-CDS-H-paniculata_contig2492:1538..19041691480986.1813133-CDS-H-paniculata_contig2492:1538..1904Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2492 1539..1904 -
1622929729.946887-CDS-H-paniculata_contig2492:2302..27611622929729.946887-CDS-H-paniculata_contig2492:2302..2761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2492 2303..2761 -
1691480986.1898372-CDS-H-paniculata_contig2492:2302..27611691480986.1898372-CDS-H-paniculata_contig2492:2302..2761Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2492 2303..2761 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2492.6773.1

>prot_H-paniculata_contig2492.6773.1 ID=prot_H-paniculata_contig2492.6773.1|Name=mRNA_H-paniculata_contig2492.6773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MSESTAQVIFHKFCEHFALELYHEHIFPTGQALERIMHEYDRLGFTGAVG
SPDVTHTKWDCCPCSFARTYTGKEGFATIAYQATVGRSGCALAVTKSFPG
ATKDKSIIRYDVAVQTVGEDPTYCDRTFRLFNEEGTWMEHKGVYLLVDNG
YHEWAMLMPPSKGSLTDEQTRWSKTLKSVRKDVESFFGVLKGRFKILKLP
IFYRENEKMDNVFFACCILHNMLHTRDDLDVLEDADWAGVDGQRDREVAE
PETDHGWVGFRRNFGCDDGQTTRS*
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mRNA from alignment at H-paniculata_contig2492:1159..4376-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2492.6773.1 ID=mRNA_H-paniculata_contig2492.6773.1|Name=mRNA_H-paniculata_contig2492.6773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3218bp|location=Sequence derived from alignment at H-paniculata_contig2492:1159..4376- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAAAGAATTATACAACGTCAAACGGTGATCAAGATGGCGCATGCTGCTGT AGTGGCGGCCATAGATCATCTAGATGCAGATGACAGACGCATTGAAGAGG ACTCGGGACATGATGACGAGGATCAGCCTCGTGTCAAGCGCACGCGACGT GTGTACCCCCGAAAAGACTACAAAGTATCGGCGTGGGCGACCATGCTGCG TTCCGAGGCCCTTTCCGATCCAACTTCAAGCGAAGCTAGGCAATTTAGGT GCCGTTTCCGTATCCCTCACGTGTTCTTCCTCGGGCGGGTAAGCTTAGCG ACGGAGAAGAGGTGGCTCCTCTCTGCAGAAGAGGATGTCGCAAGACGTCA GTGCATCCCAGTTGAGCTGAAGGTGTGTCGGTATCTTTAGCTTGACAACT GTGCAATGGCAATGGAGGTACTGGTTTGGTGATGCTGCAGTTGACTATAT CTCACGTGCATATTGCTGGGAAGTACGGTGTCGTAACTTTACCTAAATAT ACCGTACTGTATTATATTACTAGTGTACAGTACTGCACAGTCTGTAGTAC TACATTGTAGTGTATAGTACAGTTATACCGTACTCGACTATACTGTCTGT ACTCTACTCTAGAGTACTGCACTAACCCCACTGTACAATACTACACTGCA CACCGCTGTACCTAACCGCACTGTGCTGTACTCCACCGTGCTGTATGACG TTGAGCTGTTCACGCCCATTGACCTCTAGCTGCTGTCATGTTTGTGCATG GTTGCGCAACATCACAAGCTGCAAACGAATACCTGCAGCTTTTTCTCACA GTGCTCATTGCGACGTACCTGTTAAGATACGCTATGTTAGATATAATCTT GCTGCAAGTGAGTCTTGACATTTGCCAAGTTTAAAAGCCTTGAAGGCTCA TAAAGCTGGAGAAATACCGCACCAAACGAACCCAAGTCCCATTGGTGCGG CAAATACGTCGAAGTCACAAAGGTTAAATAAATCCCACAAAAACATTCAA ATCAAATCAACGTCGGTTTTCCTGCGTTTAATTATCTGTGTGGTCGTTAT CTTCATTTTGTTTAATTACCTGTGTGGCTAAAGTAATAGCCTGGTTATGT TACGGTAATACCGTTGATCCCACCGTTTTCAAGTCGGCGAATGATGTGGT ACTTAACCTATAGGTTGAAATGTTGCACAAAATCCCTGCACAAGACCGCT GAGAGACGACTGTTCTGTGGTATGCTTTATAGTCTCTAAGCCGCCTCACT GCATGCGGAGAGACTCCGTAAGTGCAGTCAGTCAGCGATATCGTGGACTA TTGGTACCTAGGACACCCAATGAAAATAGGTGATGGTACCGTCGTATATG TGCGCACTACCTCGCGAAAGGATGACTCTAGAGTCGGCTAACGTACCAGG GACGATAGGTGCACAACGTGTATCGTTGCCATGTTTTGTAGCCAATGGCA AACTACCTGTCATGATTGATCTTACCAGCTCACGTCCTCAGCCAAGCGAA ATCTAACATGTTTTGCGTGTCCCCCCACCCTCCCCCTCGCACCAGATTCT CGCTTCCCTTCAGGTGCTGACTGGGTACGGGGAACTGCTTTGACGATGTC TGCCAGCTCTCCCTCATGAGCGAGTCGACGGCACAAGTCATATTCCACAA GTTCTGCGAGCATTTCGCGTTGGAGCTGTATCATGAACACATCTTCCCTA CCGGGCAGGCTCTCGAGAGGATCATGCATGAATATGACCGGTTGGGATTC ACCGGGGCAGTCGGCTCACCCGATGTTACCCACACCAAATGGGATTGCTG CCCGTGCTCCTTTGCCCGTACCTACACGGGCAAAGAAGGATTCGCAACCA TTGCATACCAAGCGACGGTTGGCCGTAGCGGCTGTGCCCTTGCCGTCACG AAGAGTTTTCCTGGCGCTACCAAGGACAAGTCAATCATCCGTTACGACGT GGCGGTGCAAACGGTCGGTGAGGATCCCACGTACTGTGACCGGACATTCA GACTCTTCAACGAGGAAGGGACATGGATGGAACACAAGGGGGTCTACCTG CTGGTGGACAACGGGTACCATGAAGTGAGAACATCACGGCCATGGTTCTA ATAGGCGAAGATTTCCTATTACCGAGGACTAGAGTTAAGTTCAATGCAGC CGAAACTTGAAGGGTTAGGGTTAGGGTTAAGTGCCTGTTGTACCACCGTC ACATCTAAAATGCGAGTTGACAATGTTCACAGCGTTTAAAAGTAGCGAGA CTAACGCTAACCGCAACCAAACGCACCTTTCAAAATTGAGGAATTCGATT ACAATTGACCTTTACACCAATTTTCATTTATTATGCCGGCATTGCCGCCT TGTGCGCCCGTTTCAGTTGGTGATAACAACCCCGTGCGCGAAACCAACAC ACACACACACCCTCGCTCTGTGGAAACCAAACACCCTCTCGTCGACCCCA TCGCGTCTTCACACACACGCAGTGGGCTATGCTCATGCCCCCTTCAAAGG GCTCCTTGACCGATGAGCAGACACGGTGGAGCAAGACGTTGAAGAGCGTA CGAAAGGATGTGGAGTCTTTCTTCGGCGTCCTGAAGGGCAGGTTCAAAAT CCTCAAGCTTCCCATCTTCTACCGCGAAAACGAAAAAATGGACAATGTCT TCTTCGCATGCTGCATCCTCCACAACATGCTCCACACTCGCGACGACTTG GATGTACTAGAAGACGCAGACTGGGCCGGGGTGGACGGTCAGCGCGACCG TGAGGTTGCTGAGCCTGAGACGGACCACGGATGGGTAGGGTTCAGGCGCA ACTTTGGCTGCGACGACGGGCAGACCACAAGATCTTGAAGAAGTAGATCG CACATTTCTCTTACCATAGGAAGAAACATGACATCATGTGGCTTGCTAGG TAGGCGTTGTGGTCGTCGCCGGGCAGAATACGGGAGGAAGTCGAGGTTGA ACCGTCGAGAATTCAGGAAGAGTTGTTGATGTGGTTGGTTTTACGTTCGC AAGTCTCTGTCGTTGATATTGCAAGCTCGGCACAGTTTCGAGAGGTAGTA ATGCCGTGAAGCCTATGTTACATACTATATTAAAGGGGGCGTTGACGTGG TCGTGAATTCGACCGAAGAGTGTTGCACTGTTTATTCACCCATCCAGCTG TTGTTGGGTAGTGGCTTCATGGGAAAGGAATTCAACCGCCGCCATGACGG TGCTTGACGTTTTAATAC
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Coding sequence (CDS) from alignment at H-paniculata_contig2492:1159..4376-

>mRNA_H-paniculata_contig2492.6773.1 ID=mRNA_H-paniculata_contig2492.6773.1|Name=mRNA_H-paniculata_contig2492.6773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1650bp|location=Sequence derived from alignment at H-paniculata_contig2492:1159..4376- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGCGAGTCGACGGCACAAGTCATATTCCACAAGTTCTGCGAGCATTT
CGCGTTGGAGCTGTATCATGAACACATCTTCCCTACCGGGCAGGCTCTCG
AGAGGATCATGCATGAATATGACCGGTTGGGATTCACCGGGGCAGTCGGC
TCACCCGATGTTACCCACACCAAATGGGATTGCTGCCCGTGCTCCTTTGC
CCGTACCTACACGGGCAAAGAAGGATTCGCAACCATTGCATACCAAGCGA
CGGTTGGCCGTAGCGGCTGTGCCCTTGCCGTCACGAAGAGTTTTCCTGGC
GCTACCAAGGACAAGTCAATCATCCGTTACGACGTGGCGGTGCAAACGGT
CGGTGAGGATCCCACGTACTGTGACCGGACATTCAGACTCTTCAACGAGG
AAGGGACATGGATGGAACACAAGGGGGTCTACCTGCTGGTGGACAACGGG
TACCATGAAATGAGCGAGTCGACGGCACAAGTCATATTCCACAAGTTCTG
CGAGCATTTCGCGTTGGAGCTGTATCATGAACACATCTTCCCTACCGGGC
AGGCTCTCGAGAGGATCATGCATGAATATGACCGGTTGGGATTCACCGGG
GCAGTCGGCTCACCCGATGTTACCCACACCAAATGGGATTGCTGCCCGTG
CTCCTTTGCCCGTACCTACACGGGCAAAGAAGGATTCGCAACCATTGCAT
ACCAAGCGACGGTTGGCCGTAGCGGCTGTGCCCTTGCCGTCACGAAGAGT
TTTCCTGGCGCTACCAAGGACAAGTCAATCATCCGTTACGACGTGGCGGT
GCAAACGGTCGGTGAGGATCCCACGTACTGTGACCGGACATTCAGACTCT
TCAACGAGGAAGGGACATGGATGGAACACAAGGGGGTCTACCTGCTGGTG
GACAACGGGTACCATGAATGGGCTATGCTCATGCCCCCTTCAAAGGGCTC
CTTGACCGATGAGCAGACACGGTGGAGCAAGACGTTGAAGAGCGTACGAA
AGGATGTGGAGTCTTTCTTCGGCGTCCTGAAGGGCAGGTTCAAAATCCTC
AAGCTTCCCATCTTCTACCGCGAAAACGAAAAAATGGACAATGTCTTCTT
CGCATGCTGCATCCTCCACAACATGCTCCACACTCGCGACGACTTGGATG
TACTAGAAGACGCAGACTGGGCCGGGGTGGACGGTCAGCGCGACCGTGAG
GTTGCTGAGCCTGAGACGGACCACGGATGGGTAGGGTTCAGGCGCAACTT
TGGCTGCGACGACGGGCAGACCACAAGATCTTGATGGGCTATGCTCATGC
CCCCTTCAAAGGGCTCCTTGACCGATGAGCAGACACGGTGGAGCAAGACG
TTGAAGAGCGTACGAAAGGATGTGGAGTCTTTCTTCGGCGTCCTGAAGGG
CAGGTTCAAAATCCTCAAGCTTCCCATCTTCTACCGCGAAAACGAAAAAA
TGGACAATGTCTTCTTCGCATGCTGCATCCTCCACAACATGCTCCACACT
CGCGACGACTTGGATGTACTAGAAGACGCAGACTGGGCCGGGGTGGACGG
TCAGCGCGACCGTGAGGTTGCTGAGCCTGAGACGGACCACGGATGGGTAG
GGTTCAGGCGCAACTTTGGCTGCGACGACGGGCAGACCACAAGATCTTGA
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